Citrus Sinensis ID: 031735


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150---
MKLVFIGTSIAIVWYMRYHKVVKQTYNQDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRALYILNWAYRFYVEDHKVRWIPWLSGLAQTALYADFFYYYIKSWKNRELLKLPA
cEEEHHHHHHHHHHHHHccccccccccccccccEEEHHHHHHHHHHHHcccccccccEEEEEHHHHHHHHHHHHEEEHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHEEEEEEEEEcccEEEccc
ccEEEEEHHHHHHHHHHHcccccccccccccccEEEEEEHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHEHHHHHHHHHHHHHHHHHHHHHHHcccEEEccc
MKLVFIGTSIAIVWYMRYHKVVKQTynqdedtfkHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRsrnidnltgNYVFLLGAYRALYILNWAYRFYvedhkvrwipwlsglaqTALYADFFYYYIKSWKnrellklpa
MKLVFIGTSIAIVWYMRYHKVVKQTYNQDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRALYILNWAYRFYVEDHKVRWIPWLSGLAQTALYADFFYYYIKSWKNrellklpa
MKLVFIGTSIAIVWYMRYHKVVKQTYNQDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRALYILNWAYRFYVEDHKVRWIPWLSGLAQTALYADFFYYYIKSWKNRELLKLPA
**LVFIGTSIAIVWYMRYHKVVKQTYNQDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRALYILNWAYRFYVEDHKVRWIPWLSGLAQTALYADFFYYYIKSWKNREL*****
MKLVFIGTSIAIVWYMRYHKVVKQTYNQDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRALYILNWAYRFYVEDHKVRWIPWLSGLAQTALYADFFYYYIKSWKNRELLKLP*
MKLVFIGTSIAIVWYMRYHKVVKQTYNQDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRALYILNWAYRFYVEDHKVRWIPWLSGLAQTALYADFFYYYIKSWKNRELLKLPA
MKLVFIGTSIAIVWYMRYHKVVKQTYNQDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRALYILNWAYRFYVEDHKVRWIPWLSGLAQTALYADFFYYYIKSWKNRELLKL**
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
ooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
oooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
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MKLVFIGTSIAIVWYMRYHKVVKQTYNQDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRALYILNWAYRFYVEDHKVRWIPWLSGLAQTALYADFFYYYIKSWKNRELLKLPA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query153 2.2.26 [Sep-21-2011]
Q9ZTN2215 ER lumen protein retainin N/A no 1.0 0.711 0.673 1e-54
P35402215 ER lumen protein retainin no no 1.0 0.711 0.633 1e-53
O76767212 ER lumen protein retainin yes no 0.980 0.707 0.496 2e-34
Q09473213 Putative ER lumen protein yes no 0.973 0.699 0.490 3e-33
Q611C8213 ER lumen protein retainin N/A no 0.941 0.676 0.489 7e-33
Q5XHA2212 ER lumen protein retainin yes no 0.980 0.707 0.477 4e-32
Q569A6212 ER lumen protein retainin yes no 0.980 0.707 0.477 6e-32
P33946212 ER lumen protein retainin yes no 0.980 0.707 0.470 7e-32
Q99JH8212 ER lumen protein retainin yes no 0.980 0.707 0.470 9e-32
Q68ES4212 ER lumen protein retainin N/A no 0.980 0.707 0.470 1e-31
>sp|Q9ZTN2|ERD2_PETHY ER lumen protein retaining receptor OS=Petunia hybrida GN=ERD2 PE=2 SV=1 Back     alignment and function desciption
 Score =  211 bits (537), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 103/153 (67%), Positives = 130/153 (84%)

Query: 1   MKLVFIGTSIAIVWYMRYHKVVKQTYNQDEDTFKHYFLILPSFVLALLIPHAFNSVEILW 60
           MKLVF+G+S++IVWYMR+HK+V+++Y++D+DTF+H FL+LP  +LAL+I   F   E++W
Sbjct: 63  MKLVFLGSSLSIVWYMRHHKIVRRSYDKDQDTFRHLFLVLPCLLLALVINEKFTFKEVMW 122

Query: 61  TFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRALYILNWAYRFYVEDHKVRWI 120
           TFSIYLEAVAILPQLVLLQR+RNIDNLTG Y+FLLGAYR+ YILNW YR++ E H V WI
Sbjct: 123 TFSIYLEAVAILPQLVLLQRTRNIDNLTGQYIFLLGAYRSFYILNWVYRYFTEPHFVHWI 182

Query: 121 PWLSGLAQTALYADFFYYYIKSWKNRELLKLPA 153
            W++GL QT LYADFFYYY +SWKN   L+LPA
Sbjct: 183 TWIAGLIQTLLYADFFYYYFQSWKNNTKLELPA 215




Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes H-D-E-L.
Petunia hybrida (taxid: 4102)
>sp|P35402|ERD2_ARATH ER lumen protein retaining receptor OS=Arabidopsis thaliana GN=ERD2 PE=2 SV=1 Back     alignment and function description
>sp|O76767|ERD2_DROME ER lumen protein retaining receptor OS=Drosophila melanogaster GN=KdelR PE=2 SV=1 Back     alignment and function description
>sp|Q09473|ERD22_CAEEL Putative ER lumen protein retaining receptor C28H8.4 OS=Caenorhabditis elegans GN=C28H8.4 PE=3 SV=1 Back     alignment and function description
>sp|Q611C8|ERD2_CAEBR ER lumen protein retaining receptor OS=Caenorhabditis briggsae GN=erd-2 PE=3 SV=1 Back     alignment and function description
>sp|Q5XHA2|ERD21_XENTR ER lumen protein retaining receptor 1 OS=Xenopus tropicalis GN=kdelr1 PE=2 SV=1 Back     alignment and function description
>sp|Q569A6|ERD21_RAT ER lumen protein retaining receptor 1 OS=Rattus norvegicus GN=Kdelr1 PE=2 SV=1 Back     alignment and function description
>sp|P33946|ERD21_BOVIN ER lumen protein retaining receptor 1 OS=Bos taurus GN=KDELR1 PE=2 SV=2 Back     alignment and function description
>sp|Q99JH8|ERD21_MOUSE ER lumen protein retaining receptor 1 OS=Mus musculus GN=Kdelr1 PE=2 SV=1 Back     alignment and function description
>sp|Q68ES4|ER21B_XENLA ER lumen protein retaining receptor 1-B OS=Xenopus laevis GN=kdelr1-b PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query153
225454811216 PREDICTED: ER lumen protein retaining re 1.0 0.708 0.831 7e-68
255557981215 er lumen protein retaining receptor, put 0.993 0.706 0.796 7e-66
116791207215 unknown [Picea sitchensis] 1.0 0.711 0.732 5e-63
302764358215 hypothetical protein SELMODRAFT_143476 [ 1.0 0.711 0.692 2e-59
168010209215 predicted protein [Physcomitrella patens 1.0 0.711 0.666 8e-59
298201211215 ER luminal protein receptor 2b [Nicotian 1.0 0.711 0.679 9e-59
224140829215 predicted protein [Populus trichocarpa] 1.0 0.711 0.679 2e-58
297790580215 hypothetical protein ARALYDRAFT_333020 [ 1.0 0.711 0.673 4e-58
21592401215 ER lumen retaining receptor (HDEL recept 1.0 0.711 0.679 6e-58
449453278215 PREDICTED: ER lumen protein retaining re 1.0 0.711 0.679 1e-57
>gi|225454811|ref|XP_002276990.1| PREDICTED: ER lumen protein retaining receptor [Vitis vinifera] gi|297737333|emb|CBI26534.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  261 bits (667), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 128/154 (83%), Positives = 138/154 (89%), Gaps = 1/154 (0%)

Query: 1   MKLVFIGTSIAIVWYMRYHKVVKQTYNQDEDTFKHYFLILPSFVLALLIPHAFNSVEILW 60
           MKLVF+GTSIAIVWYMRYHKVVKQTY++ EDTF+HYFL+LP FVLALLI  + +  EILW
Sbjct: 63  MKLVFLGTSIAIVWYMRYHKVVKQTYSKQEDTFRHYFLVLPCFVLALLIHRSSSVTEILW 122

Query: 61  TFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRALYILNWAYRFYVED-HKVRW 119
           TFSIYLEAVAI+PQLVLLQRSR IDNLTGNYVFLLGAYRALYILNWAYRF VED H   W
Sbjct: 123 TFSIYLEAVAIVPQLVLLQRSRIIDNLTGNYVFLLGAYRALYILNWAYRFLVEDNHHYHW 182

Query: 120 IPWLSGLAQTALYADFFYYYIKSWKNRELLKLPA 153
           IPW+SGL QTALYADFFYYY KSWKNRE L+LPA
Sbjct: 183 IPWISGLVQTALYADFFYYYFKSWKNREKLQLPA 216




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557981|ref|XP_002520019.1| er lumen protein retaining receptor, putative [Ricinus communis] gi|223540783|gb|EEF42343.1| er lumen protein retaining receptor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|116791207|gb|ABK25895.1| unknown [Picea sitchensis] Back     alignment and taxonomy information
>gi|302764358|ref|XP_002965600.1| hypothetical protein SELMODRAFT_143476 [Selaginella moellendorffii] gi|302769328|ref|XP_002968083.1| hypothetical protein SELMODRAFT_169655 [Selaginella moellendorffii] gi|300163727|gb|EFJ30337.1| hypothetical protein SELMODRAFT_169655 [Selaginella moellendorffii] gi|300166414|gb|EFJ33020.1| hypothetical protein SELMODRAFT_143476 [Selaginella moellendorffii] Back     alignment and taxonomy information
>gi|168010209|ref|XP_001757797.1| predicted protein [Physcomitrella patens subsp. patens] gi|162691073|gb|EDQ77437.1| predicted protein [Physcomitrella patens subsp. patens] Back     alignment and taxonomy information
>gi|298201211|gb|ADI60301.1| ER luminal protein receptor 2b [Nicotiana benthamiana] Back     alignment and taxonomy information
>gi|224140829|ref|XP_002323781.1| predicted protein [Populus trichocarpa] gi|222866783|gb|EEF03914.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297790580|ref|XP_002863175.1| hypothetical protein ARALYDRAFT_333020 [Arabidopsis lyrata subsp. lyrata] gi|297309009|gb|EFH39434.1| hypothetical protein ARALYDRAFT_333020 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|21592401|gb|AAM64352.1| ER lumen retaining receptor (HDEL receptor), putative [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449453278|ref|XP_004144385.1| PREDICTED: ER lumen protein retaining receptor-like [Cucumis sativus] gi|449506093|ref|XP_004162650.1| PREDICTED: ER lumen protein retaining receptor-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query153
TAIR|locus:2086954215 ERD2B "AT3G25040" [Arabidopsis 1.0 0.711 0.673 1.7e-57
TAIR|locus:2013683215 ERD2 "AT1G29330" [Arabidopsis 1.0 0.711 0.633 4e-51
FB|FBgn0022268212 KdelR "KDEL receptor" [Drosoph 0.980 0.707 0.496 1.3e-34
WB|WBGene00016195213 C28H8.4 [Caenorhabditis elegan 0.973 0.699 0.496 5.8e-34
ASPGD|ASPL0000016270191 AN11226 [Emericella nidulans ( 0.960 0.769 0.493 9.5e-34
GENEDB_PFALCIPARUM|PF13_0280221 ERD2 "ER lumen protein retaini 0.986 0.683 0.464 9.5e-34
UNIPROTKB|Q76NM1221 ERD2 "ER lumen protein retaini 0.986 0.683 0.464 9.5e-34
WB|WBGene00001331213 erd-2 [Caenorhabditis elegans 0.895 0.643 0.507 2.5e-33
UNIPROTKB|P33946212 KDELR1 "ER lumen protein retai 0.980 0.707 0.470 8.5e-33
RGD|1306764212 Kdelr1 "KDEL (Lys-Asp-Glu-Leu) 0.980 0.707 0.477 8.5e-33
TAIR|locus:2086954 ERD2B "AT3G25040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
 Identities = 103/153 (67%), Positives = 127/153 (83%)

Query:     1 MKLVFIGTSIAIVWYMRYHKVVKQTYNQDEDTFKHYFLILPSFVLALLIPHAFNSVEILW 60
             MKLVF+G+S +IVWYM+YHK V +TY++++DTF+H+FL+LP F+LALLI   F  +E+LW
Sbjct:    63 MKLVFLGSSFSIVWYMKYHKAVHRTYDREQDTFRHWFLVLPCFLLALLIHEKFTFLEVLW 122

Query:    61 TFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRALYILNWAYRFYVEDHKVRWI 120
             T S+YLEAVAILPQLVLLQR+RNIDNLTG Y+FLLG YR LYILNW YR++ E H V WI
Sbjct:   123 TSSLYLEAVAILPQLVLLQRTRNIDNLTGQYIFLLGGYRGLYILNWIYRYFTEPHFVHWI 182

Query:   121 PWLSGLAQTALYADFFYYYIKSWKNRELLKLPA 153
              W++G  QT LYADFFYYY  SWKN + L+LPA
Sbjct:   183 TWIAGFVQTLLYADFFYYYFLSWKNNKKLQLPA 215




GO:0004872 "receptor activity" evidence=ISS
GO:0005739 "mitochondrion" evidence=ISM
GO:0006621 "protein retention in ER lumen" evidence=IEA
GO:0015031 "protein transport" evidence=ISS
GO:0016021 "integral to membrane" evidence=ISS
GO:0046923 "ER retention sequence binding" evidence=IEA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0010204 "defense response signaling pathway, resistance gene-independent" evidence=IMP
GO:0006084 "acetyl-CoA metabolic process" evidence=RCA
GO:0016126 "sterol biosynthetic process" evidence=RCA
GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA
GO:0030244 "cellulose biosynthetic process" evidence=RCA
GO:0048193 "Golgi vesicle transport" evidence=RCA
TAIR|locus:2013683 ERD2 "AT1G29330" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
FB|FBgn0022268 KdelR "KDEL receptor" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00016195 C28H8.4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ASPGD|ASPL0000016270 AN11226 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PF13_0280 ERD2 "ER lumen protein retaining receptor" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms
UNIPROTKB|Q76NM1 ERD2 "ER lumen protein retaining receptor" [Plasmodium falciparum 3D7 (taxid:36329)] Back     alignment and assigned GO terms
WB|WBGene00001331 erd-2 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|P33946 KDELR1 "ER lumen protein retaining receptor 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1306764 Kdelr1 "KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query153
pfam00810143 pfam00810, ER_lumen_recept, ER lumen protein retai 9e-42
COG5196214 COG5196, ERD2, ER lumen protein retaining receptor 2e-38
>gnl|CDD|144416 pfam00810, ER_lumen_recept, ER lumen protein retaining receptor Back     alignment and domain information
 Score =  135 bits (343), Expect = 9e-42
 Identities = 60/110 (54%), Positives = 85/110 (77%), Gaps = 2/110 (1%)

Query: 1   MKLVFIGTSIAIVWYMRYHKVVKQTYNQDEDTFKHYFLILPSFVLALLIPHAFNSVEILW 60
           MK++FI +S+  ++ M+     K TY++D DTFK  +LI+P  VLAL+  H+++ +EILW
Sbjct: 36  MKILFIVSSVYTIYLMK--FKYKATYDRDIDTFKIEYLIVPCLVLALIFHHSYSFLEILW 93

Query: 61  TFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRALYILNWAYRF 110
           TFSIYLE+VAILPQL +LQ++  ++NLT +Y+F LG YRALYILNW YR+
Sbjct: 94  TFSIYLESVAILPQLFMLQKTGEVENLTSHYLFALGLYRALYILNWIYRY 143


Length = 143

>gnl|CDD|227523 COG5196, ERD2, ER lumen protein retaining receptor [Intracellular trafficking and secretion] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 153
KOG3106212 consensus ER lumen protein retaining receptor [Int 100.0
COG5196214 ERD2 ER lumen protein retaining receptor [Intracel 100.0
PF00810147 ER_lumen_recept: ER lumen protein retaining recept 100.0
PF0419361 PQ-loop: PQ loop repeat 95.09
>KOG3106 consensus ER lumen protein retaining receptor [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
Probab=100.00  E-value=3.1e-66  Score=414.49  Aligned_cols=150  Identities=50%  Similarity=0.929  Sum_probs=147.6

Q ss_pred             CeeehhhHHHHHHHHHhcccccccccccccCcceeehhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHhHHHHHHHHH
Q 031735            1 MKLVFIGTSIAIVWYMRYHKVVKQTYNQDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQR   80 (153)
Q Consensus         1 mKi~~i~~s~~iiyli~~~~~~~~Tyd~~~Dtf~~~~li~p~~vLali~~~~~~~~eilWtFSiyLEsvAILPQL~mlqk   80 (153)
                      ||++||++|.+++|+|++  |+|+|||+|+|||+++|+++||++||+++||++++.|++||||+|||||||||||+|+||
T Consensus        63 mki~fl~~t~~ivymi~~--k~~~tYd~~~DtFri~~llvp~~vlsl~i~~~~t~~eilWtFsiyLEsVaILPQL~~lq~  140 (212)
T KOG3106|consen   63 MKIAFLASTLWIVYMIRF--KLRATYDKEKDTFRIEYLLVPSAVLSLLINHSFTILEILWTFSIYLESVAILPQLFMLQK  140 (212)
T ss_pred             HHHHHHHHHHHHHHHHHH--HHHHHHhcccCceeEEEEehhheeeeeeecCCccHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence            899999999999999999  999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCcccchhHHHHHHHHHHHHHHHHhhhhhhhhcCCccchhhhhHHHHHHHHHhhhheeeEeeeecCccccCCC
Q 031735           81 SRNIDNLTGNYVFLLGAYRALYILNWAYRFYVEDHKVRWIPWLSGLAQTALYADFFYYYIKSWKNRELLKLPA  153 (153)
Q Consensus        81 ~~~ve~lts~Yv~~LG~yR~ly~~nWi~ry~~~~~~~~~~~~~~givQt~ly~DFfy~Y~~~~~~G~~~~lp~  153 (153)
                      +||+|++|+||+||||+||++|++|||+|+.+|+.+ |++++++|++||++||||||+|++++++|+|++||+
T Consensus       141 tg~~E~~TahYvfaLG~yR~ly~~~WI~r~~~e~~~-~~iai~agiVQT~ly~DFfy~Y~~~v~~g~~~~LP~  212 (212)
T KOG3106|consen  141 TGEAETITAHYLFALGLYRALYIANWIYRYVTEDFW-DPIAIVAGIVQTVLYADFFYLYVTKVLQGKKLKLPA  212 (212)
T ss_pred             cCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cchHHHHHHHHHHHHHhHHHHHHHHHHcCCcCCCCC
Confidence            999999999999999999999999999999999855 999999999999999999999999999999999995



>COG5196 ERD2 ER lumen protein retaining receptor [Intracellular trafficking and secretion] Back     alignment and domain information
>PF00810 ER_lumen_recept: ER lumen protein retaining receptor; InterPro: IPR000133 Proteins resident in the lumen of the endoplasmic reticulum (ER) contain a C-terminal tetrapeptide, commonly known as Lys-Asp-Glu-Leu (KDEL) in mammals and His-Asp-Glu-Leu (HDEL) in yeast (Saccharomyces cerevisiae) that acts as a signal for their retrieval from subsequent compartments of the secretory pathway Back     alignment and domain information
>PF04193 PQ-loop: PQ loop repeat Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query153
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 42.9 bits (100), Expect = 1e-05
 Identities = 23/138 (16%), Positives = 50/138 (36%), Gaps = 24/138 (17%)

Query: 15  YMRYHKVVKQTYNQ-DEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILP 73
             +   +++ + N  +   ++  F  L  F  +  IP     + ++W   I  + + ++ 
Sbjct: 352 CDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTI--LLSLIWFDVIKSDVMVVVN 409

Query: 74  QLV---LLQRSRN-----IDNLTGNYVFLLGAYRALY--ILNWAYRFYVE-DHKVRWIPW 122
           +L    L+++        I ++       L    AL+  I++  Y      D      P+
Sbjct: 410 KLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVD-HYNIPKTFDSDDLIPPY 468

Query: 123 LSGLAQTALYADFFYYYI 140
           L        Y   FY +I
Sbjct: 469 LDQ------Y---FYSHI 477


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00