Citrus Sinensis ID: 031735
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 153 | ||||||
| 225454811 | 216 | PREDICTED: ER lumen protein retaining re | 1.0 | 0.708 | 0.831 | 7e-68 | |
| 255557981 | 215 | er lumen protein retaining receptor, put | 0.993 | 0.706 | 0.796 | 7e-66 | |
| 116791207 | 215 | unknown [Picea sitchensis] | 1.0 | 0.711 | 0.732 | 5e-63 | |
| 302764358 | 215 | hypothetical protein SELMODRAFT_143476 [ | 1.0 | 0.711 | 0.692 | 2e-59 | |
| 168010209 | 215 | predicted protein [Physcomitrella patens | 1.0 | 0.711 | 0.666 | 8e-59 | |
| 298201211 | 215 | ER luminal protein receptor 2b [Nicotian | 1.0 | 0.711 | 0.679 | 9e-59 | |
| 224140829 | 215 | predicted protein [Populus trichocarpa] | 1.0 | 0.711 | 0.679 | 2e-58 | |
| 297790580 | 215 | hypothetical protein ARALYDRAFT_333020 [ | 1.0 | 0.711 | 0.673 | 4e-58 | |
| 21592401 | 215 | ER lumen retaining receptor (HDEL recept | 1.0 | 0.711 | 0.679 | 6e-58 | |
| 449453278 | 215 | PREDICTED: ER lumen protein retaining re | 1.0 | 0.711 | 0.679 | 1e-57 |
| >gi|225454811|ref|XP_002276990.1| PREDICTED: ER lumen protein retaining receptor [Vitis vinifera] gi|297737333|emb|CBI26534.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 261 bits (667), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 128/154 (83%), Positives = 138/154 (89%), Gaps = 1/154 (0%)
Query: 1 MKLVFIGTSIAIVWYMRYHKVVKQTYNQDEDTFKHYFLILPSFVLALLIPHAFNSVEILW 60
MKLVF+GTSIAIVWYMRYHKVVKQTY++ EDTF+HYFL+LP FVLALLI + + EILW
Sbjct: 63 MKLVFLGTSIAIVWYMRYHKVVKQTYSKQEDTFRHYFLVLPCFVLALLIHRSSSVTEILW 122
Query: 61 TFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRALYILNWAYRFYVED-HKVRW 119
TFSIYLEAVAI+PQLVLLQRSR IDNLTGNYVFLLGAYRALYILNWAYRF VED H W
Sbjct: 123 TFSIYLEAVAIVPQLVLLQRSRIIDNLTGNYVFLLGAYRALYILNWAYRFLVEDNHHYHW 182
Query: 120 IPWLSGLAQTALYADFFYYYIKSWKNRELLKLPA 153
IPW+SGL QTALYADFFYYY KSWKNRE L+LPA
Sbjct: 183 IPWISGLVQTALYADFFYYYFKSWKNREKLQLPA 216
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255557981|ref|XP_002520019.1| er lumen protein retaining receptor, putative [Ricinus communis] gi|223540783|gb|EEF42343.1| er lumen protein retaining receptor, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|116791207|gb|ABK25895.1| unknown [Picea sitchensis] | Back alignment and taxonomy information |
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| >gi|302764358|ref|XP_002965600.1| hypothetical protein SELMODRAFT_143476 [Selaginella moellendorffii] gi|302769328|ref|XP_002968083.1| hypothetical protein SELMODRAFT_169655 [Selaginella moellendorffii] gi|300163727|gb|EFJ30337.1| hypothetical protein SELMODRAFT_169655 [Selaginella moellendorffii] gi|300166414|gb|EFJ33020.1| hypothetical protein SELMODRAFT_143476 [Selaginella moellendorffii] | Back alignment and taxonomy information |
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| >gi|168010209|ref|XP_001757797.1| predicted protein [Physcomitrella patens subsp. patens] gi|162691073|gb|EDQ77437.1| predicted protein [Physcomitrella patens subsp. patens] | Back alignment and taxonomy information |
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| >gi|298201211|gb|ADI60301.1| ER luminal protein receptor 2b [Nicotiana benthamiana] | Back alignment and taxonomy information |
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| >gi|224140829|ref|XP_002323781.1| predicted protein [Populus trichocarpa] gi|222866783|gb|EEF03914.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|297790580|ref|XP_002863175.1| hypothetical protein ARALYDRAFT_333020 [Arabidopsis lyrata subsp. lyrata] gi|297309009|gb|EFH39434.1| hypothetical protein ARALYDRAFT_333020 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|21592401|gb|AAM64352.1| ER lumen retaining receptor (HDEL receptor), putative [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|449453278|ref|XP_004144385.1| PREDICTED: ER lumen protein retaining receptor-like [Cucumis sativus] gi|449506093|ref|XP_004162650.1| PREDICTED: ER lumen protein retaining receptor-like [Cucumis sativus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 153 | ||||||
| TAIR|locus:2086954 | 215 | ERD2B "AT3G25040" [Arabidopsis | 1.0 | 0.711 | 0.673 | 1.7e-57 | |
| TAIR|locus:2013683 | 215 | ERD2 "AT1G29330" [Arabidopsis | 1.0 | 0.711 | 0.633 | 4e-51 | |
| FB|FBgn0022268 | 212 | KdelR "KDEL receptor" [Drosoph | 0.980 | 0.707 | 0.496 | 1.3e-34 | |
| WB|WBGene00016195 | 213 | C28H8.4 [Caenorhabditis elegan | 0.973 | 0.699 | 0.496 | 5.8e-34 | |
| ASPGD|ASPL0000016270 | 191 | AN11226 [Emericella nidulans ( | 0.960 | 0.769 | 0.493 | 9.5e-34 | |
| GENEDB_PFALCIPARUM|PF13_0280 | 221 | ERD2 "ER lumen protein retaini | 0.986 | 0.683 | 0.464 | 9.5e-34 | |
| UNIPROTKB|Q76NM1 | 221 | ERD2 "ER lumen protein retaini | 0.986 | 0.683 | 0.464 | 9.5e-34 | |
| WB|WBGene00001331 | 213 | erd-2 [Caenorhabditis elegans | 0.895 | 0.643 | 0.507 | 2.5e-33 | |
| UNIPROTKB|P33946 | 212 | KDELR1 "ER lumen protein retai | 0.980 | 0.707 | 0.470 | 8.5e-33 | |
| RGD|1306764 | 212 | Kdelr1 "KDEL (Lys-Asp-Glu-Leu) | 0.980 | 0.707 | 0.477 | 8.5e-33 |
| TAIR|locus:2086954 ERD2B "AT3G25040" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 103/153 (67%), Positives = 127/153 (83%)
Query: 1 MKLVFIGTSIAIVWYMRYHKVVKQTYNQDEDTFKHYFLILPSFVLALLIPHAFNSVEILW 60
MKLVF+G+S +IVWYM+YHK V +TY++++DTF+H+FL+LP F+LALLI F +E+LW
Sbjct: 63 MKLVFLGSSFSIVWYMKYHKAVHRTYDREQDTFRHWFLVLPCFLLALLIHEKFTFLEVLW 122
Query: 61 TFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRALYILNWAYRFYVEDHKVRWI 120
T S+YLEAVAILPQLVLLQR+RNIDNLTG Y+FLLG YR LYILNW YR++ E H V WI
Sbjct: 123 TSSLYLEAVAILPQLVLLQRTRNIDNLTGQYIFLLGGYRGLYILNWIYRYFTEPHFVHWI 182
Query: 121 PWLSGLAQTALYADFFYYYIKSWKNRELLKLPA 153
W++G QT LYADFFYYY SWKN + L+LPA
Sbjct: 183 TWIAGFVQTLLYADFFYYYFLSWKNNKKLQLPA 215
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| TAIR|locus:2013683 ERD2 "AT1G29330" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| FB|FBgn0022268 KdelR "KDEL receptor" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| WB|WBGene00016195 C28H8.4 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000016270 AN11226 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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| GENEDB_PFALCIPARUM|PF13_0280 ERD2 "ER lumen protein retaining receptor" [Plasmodium falciparum (taxid:5833)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q76NM1 ERD2 "ER lumen protein retaining receptor" [Plasmodium falciparum 3D7 (taxid:36329)] | Back alignment and assigned GO terms |
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| WB|WBGene00001331 erd-2 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P33946 KDELR1 "ER lumen protein retaining receptor 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| RGD|1306764 Kdelr1 "KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 153 | |||
| pfam00810 | 143 | pfam00810, ER_lumen_recept, ER lumen protein retai | 9e-42 | |
| COG5196 | 214 | COG5196, ERD2, ER lumen protein retaining receptor | 2e-38 |
| >gnl|CDD|144416 pfam00810, ER_lumen_recept, ER lumen protein retaining receptor | Back alignment and domain information |
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Score = 135 bits (343), Expect = 9e-42
Identities = 60/110 (54%), Positives = 85/110 (77%), Gaps = 2/110 (1%)
Query: 1 MKLVFIGTSIAIVWYMRYHKVVKQTYNQDEDTFKHYFLILPSFVLALLIPHAFNSVEILW 60
MK++FI +S+ ++ M+ K TY++D DTFK +LI+P VLAL+ H+++ +EILW
Sbjct: 36 MKILFIVSSVYTIYLMK--FKYKATYDRDIDTFKIEYLIVPCLVLALIFHHSYSFLEILW 93
Query: 61 TFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRALYILNWAYRF 110
TFSIYLE+VAILPQL +LQ++ ++NLT +Y+F LG YRALYILNW YR+
Sbjct: 94 TFSIYLESVAILPQLFMLQKTGEVENLTSHYLFALGLYRALYILNWIYRY 143
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Length = 143 |
| >gnl|CDD|227523 COG5196, ERD2, ER lumen protein retaining receptor [Intracellular trafficking and secretion] | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 153 | |||
| KOG3106 | 212 | consensus ER lumen protein retaining receptor [Int | 100.0 | |
| COG5196 | 214 | ERD2 ER lumen protein retaining receptor [Intracel | 100.0 | |
| PF00810 | 147 | ER_lumen_recept: ER lumen protein retaining recept | 100.0 | |
| PF04193 | 61 | PQ-loop: PQ loop repeat | 95.09 |
| >KOG3106 consensus ER lumen protein retaining receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
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Probab=100.00 E-value=3.1e-66 Score=414.49 Aligned_cols=150 Identities=50% Similarity=0.929 Sum_probs=147.6
Q ss_pred CeeehhhHHHHHHHHHhcccccccccccccCcceeehhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHhHHHHHHHHH
Q 031735 1 MKLVFIGTSIAIVWYMRYHKVVKQTYNQDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQR 80 (153)
Q Consensus 1 mKi~~i~~s~~iiyli~~~~~~~~Tyd~~~Dtf~~~~li~p~~vLali~~~~~~~~eilWtFSiyLEsvAILPQL~mlqk 80 (153)
||++||++|.+++|+|++ |+|+|||+|+|||+++|+++||++||+++||++++.|++||||+|||||||||||+|+||
T Consensus 63 mki~fl~~t~~ivymi~~--k~~~tYd~~~DtFri~~llvp~~vlsl~i~~~~t~~eilWtFsiyLEsVaILPQL~~lq~ 140 (212)
T KOG3106|consen 63 MKIAFLASTLWIVYMIRF--KLRATYDKEKDTFRIEYLLVPSAVLSLLINHSFTILEILWTFSIYLESVAILPQLFMLQK 140 (212)
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHhcccCceeEEEEehhheeeeeeecCCccHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 899999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCcccchhHHHHHHHHHHHHHHHHhhhhhhhhcCCccchhhhhHHHHHHHHHhhhheeeEeeeecCccccCCC
Q 031735 81 SRNIDNLTGNYVFLLGAYRALYILNWAYRFYVEDHKVRWIPWLSGLAQTALYADFFYYYIKSWKNRELLKLPA 153 (153)
Q Consensus 81 ~~~ve~lts~Yv~~LG~yR~ly~~nWi~ry~~~~~~~~~~~~~~givQt~ly~DFfy~Y~~~~~~G~~~~lp~ 153 (153)
+||+|++|+||+||||+||++|++|||+|+.+|+.+ |++++++|++||++||||||+|++++++|+|++||+
T Consensus 141 tg~~E~~TahYvfaLG~yR~ly~~~WI~r~~~e~~~-~~iai~agiVQT~ly~DFfy~Y~~~v~~g~~~~LP~ 212 (212)
T KOG3106|consen 141 TGEAETITAHYLFALGLYRALYIANWIYRYVTEDFW-DPIAIVAGIVQTVLYADFFYLYVTKVLQGKKLKLPA 212 (212)
T ss_pred cCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cchHHHHHHHHHHHHHhHHHHHHHHHHcCCcCCCCC
Confidence 999999999999999999999999999999999855 999999999999999999999999999999999995
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| >COG5196 ERD2 ER lumen protein retaining receptor [Intracellular trafficking and secretion] | Back alignment and domain information |
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| >PF00810 ER_lumen_recept: ER lumen protein retaining receptor; InterPro: IPR000133 Proteins resident in the lumen of the endoplasmic reticulum (ER) contain a C-terminal tetrapeptide, commonly known as Lys-Asp-Glu-Leu (KDEL) in mammals and His-Asp-Glu-Leu (HDEL) in yeast (Saccharomyces cerevisiae) that acts as a signal for their retrieval from subsequent compartments of the secretory pathway | Back alignment and domain information |
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| >PF04193 PQ-loop: PQ loop repeat | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 153 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
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Score = 42.9 bits (100), Expect = 1e-05
Identities = 23/138 (16%), Positives = 50/138 (36%), Gaps = 24/138 (17%)
Query: 15 YMRYHKVVKQTYNQ-DEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILP 73
+ +++ + N + ++ F L F + IP + ++W I + + ++
Sbjct: 352 CDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTI--LLSLIWFDVIKSDVMVVVN 409
Query: 74 QLV---LLQRSRN-----IDNLTGNYVFLLGAYRALY--ILNWAYRFYVE-DHKVRWIPW 122
+L L+++ I ++ L AL+ I++ Y D P+
Sbjct: 410 KLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVD-HYNIPKTFDSDDLIPPY 468
Query: 123 LSGLAQTALYADFFYYYI 140
L Y FY +I
Sbjct: 469 LDQ------Y---FYSHI 477
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Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00