Citrus Sinensis ID: 031747
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 153 | ||||||
| 224140829 | 215 | predicted protein [Populus trichocarpa] | 1.0 | 0.711 | 0.862 | 1e-71 | |
| 388513889 | 215 | unknown [Lotus japonicus] | 1.0 | 0.711 | 0.869 | 3e-71 | |
| 449453278 | 215 | PREDICTED: ER lumen protein retaining re | 1.0 | 0.711 | 0.836 | 3e-71 | |
| 298201211 | 215 | ER luminal protein receptor 2b [Nicotian | 1.0 | 0.711 | 0.823 | 5e-71 | |
| 255554088 | 206 | er lumen protein retaining receptor, put | 1.0 | 0.742 | 0.856 | 5e-71 | |
| 388499340 | 215 | unknown [Lotus japonicus] | 1.0 | 0.711 | 0.869 | 8e-71 | |
| 224060375 | 215 | predicted protein [Populus trichocarpa] | 1.0 | 0.711 | 0.849 | 1e-70 | |
| 115485475 | 215 | Os11g0473000 [Oryza sativa Japonica Grou | 1.0 | 0.711 | 0.823 | 4e-69 | |
| 125534340 | 235 | hypothetical protein OsI_36067 [Oryza sa | 1.0 | 0.651 | 0.823 | 5e-69 | |
| 125577104 | 235 | hypothetical protein OsJ_33859 [Oryza sa | 1.0 | 0.651 | 0.823 | 5e-69 |
| >gi|224140829|ref|XP_002323781.1| predicted protein [Populus trichocarpa] gi|222866783|gb|EEF03914.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/153 (86%), Positives = 138/153 (90%)
Query: 1 MKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFRRFFLVLPCLLLALLINENFTFKEVMW 60
MKLIFLGSSFSIVWYMRHH +VRRSY+KD DTFR FF+VLPCL+LALLI+E FTF EVMW
Sbjct: 63 MKLIFLGSSFSIVWYMRHHKLVRRSYDKDHDTFRHFFIVLPCLILALLIHEKFTFIEVMW 122
Query: 61 TFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTELHYVHWI 120
FSLYLEAVAILPQLVLLQRTRNIDNLTGQYVF LGAYR LYILNWVYR+FTE HYVHWI
Sbjct: 123 AFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFLLGAYRALYILNWVYRFFTEPHYVHWI 182
Query: 121 PWISGLVQTLLYADFFYYYFDSWKNNKNLRLPA 153
WISGLVQTLLYADFFYYYF S KNN L LPA
Sbjct: 183 TWISGLVQTLLYADFFYYYFQSLKNNVKLELPA 215
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388513889|gb|AFK45006.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
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| >gi|449453278|ref|XP_004144385.1| PREDICTED: ER lumen protein retaining receptor-like [Cucumis sativus] gi|449506093|ref|XP_004162650.1| PREDICTED: ER lumen protein retaining receptor-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|298201211|gb|ADI60301.1| ER luminal protein receptor 2b [Nicotiana benthamiana] | Back alignment and taxonomy information |
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| >gi|255554088|ref|XP_002518084.1| er lumen protein retaining receptor, putative [Ricinus communis] gi|223542680|gb|EEF44217.1| er lumen protein retaining receptor, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|388499340|gb|AFK37736.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
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| >gi|224060375|ref|XP_002300168.1| predicted protein [Populus trichocarpa] gi|118481282|gb|ABK92586.1| unknown [Populus trichocarpa] gi|222847426|gb|EEE84973.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|115485475|ref|NP_001067881.1| Os11g0473000 [Oryza sativa Japonica Group] gi|77550860|gb|ABA93657.1| ER lumen protein retaining receptor, putative, expressed [Oryza sativa Japonica Group] gi|113645103|dbj|BAF28244.1| Os11g0473000 [Oryza sativa Japonica Group] gi|215740777|dbj|BAG96933.1| unnamed protein product [Oryza sativa Japonica Group] gi|215765653|dbj|BAG87350.1| unnamed protein product [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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| >gi|125534340|gb|EAY80888.1| hypothetical protein OsI_36067 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
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| >gi|125577104|gb|EAZ18326.1| hypothetical protein OsJ_33859 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 153 | ||||||
| TAIR|locus:2086954 | 215 | ERD2B "AT3G25040" [Arabidopsis | 1.0 | 0.711 | 0.699 | 2e-56 | |
| TAIR|locus:2013683 | 215 | ERD2 "AT1G29330" [Arabidopsis | 1.0 | 0.711 | 0.620 | 5.2e-49 | |
| WB|WBGene00001331 | 213 | erd-2 [Caenorhabditis elegans | 0.856 | 0.615 | 0.485 | 1.2e-28 | |
| FB|FBgn0022268 | 212 | KdelR "KDEL receptor" [Drosoph | 0.980 | 0.707 | 0.437 | 2.4e-28 | |
| ASPGD|ASPL0000016270 | 191 | AN11226 [Emericella nidulans ( | 0.967 | 0.774 | 0.397 | 1.7e-27 | |
| UNIPROTKB|P33946 | 212 | KDELR1 "ER lumen protein retai | 0.980 | 0.707 | 0.392 | 1.5e-26 | |
| UNIPROTKB|P24390 | 212 | KDELR1 "ER lumen protein retai | 0.980 | 0.707 | 0.392 | 1.5e-26 | |
| UNIPROTKB|Q8NBW7 | 150 | KDELR1 "ER lumen protein retai | 0.980 | 1.0 | 0.392 | 1.5e-26 | |
| UNIPROTKB|F2Z4Z3 | 212 | KDELR1 "ER lumen protein retai | 0.980 | 0.707 | 0.392 | 1.5e-26 | |
| MGI|MGI:1915387 | 212 | Kdelr1 "KDEL (Lys-Asp-Glu-Leu) | 0.980 | 0.707 | 0.392 | 1.5e-26 |
| TAIR|locus:2086954 ERD2B "AT3G25040" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 107/153 (69%), Positives = 122/153 (79%)
Query: 1 MKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFRRFFXXXXXXXXXXXINENFTFKEVMW 60
MKL+FLGSSFSIVWYM++H V R+Y+++QDTFR +F I+E FTF EV+W
Sbjct: 63 MKLVFLGSSFSIVWYMKYHKAVHRTYDREQDTFRHWFLVLPCFLLALLIHEKFTFLEVLW 122
Query: 61 TFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTELHYVHWI 120
T SLYLEAVAILPQLVLLQRTRNIDNLTGQY+F LG YRGLYILNW+YRYFTE H+VHWI
Sbjct: 123 TSSLYLEAVAILPQLVLLQRTRNIDNLTGQYIFLLGGYRGLYILNWIYRYFTEPHFVHWI 182
Query: 121 PWISGLVQTLLYADXXXXXXDSWKNNKNLRLPA 153
WI+G VQTLLYAD SWKNNK L+LPA
Sbjct: 183 TWIAGFVQTLLYADFFYYYFLSWKNNKKLQLPA 215
|
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| TAIR|locus:2013683 ERD2 "AT1G29330" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| WB|WBGene00001331 erd-2 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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| FB|FBgn0022268 KdelR "KDEL receptor" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000016270 AN11226 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P33946 KDELR1 "ER lumen protein retaining receptor 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P24390 KDELR1 "ER lumen protein retaining receptor 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8NBW7 KDELR1 "ER lumen protein retaining receptor" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F2Z4Z3 KDELR1 "ER lumen protein retaining receptor" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| MGI|MGI:1915387 Kdelr1 "KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 153 | |||
| pfam00810 | 143 | pfam00810, ER_lumen_recept, ER lumen protein retai | 3e-41 | |
| COG5196 | 214 | COG5196, ERD2, ER lumen protein retaining receptor | 1e-36 |
| >gnl|CDD|144416 pfam00810, ER_lumen_recept, ER lumen protein retaining receptor | Back alignment and domain information |
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Score = 134 bits (340), Expect = 3e-41
Identities = 55/110 (50%), Positives = 85/110 (77%), Gaps = 2/110 (1%)
Query: 1 MKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFRRFFLVLPCLLLALLINENFTFKEVMW 60
MK++F+ SS ++ M+ + +Y++D DTF+ +L++PCL+LAL+ + +++F E++W
Sbjct: 36 MKILFIVSSVYTIYLMKF--KYKATYDRDIDTFKIEYLIVPCLVLALIFHHSYSFLEILW 93
Query: 61 TFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRGLYILNWVYRY 110
TFS+YLE+VAILPQL +LQ+T ++NLT Y+F LG YR LYILNW+YRY
Sbjct: 94 TFSIYLESVAILPQLFMLQKTGEVENLTSHYLFALGLYRALYILNWIYRY 143
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Length = 143 |
| >gnl|CDD|227523 COG5196, ERD2, ER lumen protein retaining receptor [Intracellular trafficking and secretion] | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 153 | |||
| KOG3106 | 212 | consensus ER lumen protein retaining receptor [Int | 100.0 | |
| COG5196 | 214 | ERD2 ER lumen protein retaining receptor [Intracel | 100.0 | |
| PF00810 | 147 | ER_lumen_recept: ER lumen protein retaining recept | 100.0 | |
| PF04193 | 61 | PQ-loop: PQ loop repeat | 94.73 |
| >KOG3106 consensus ER lumen protein retaining receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
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Probab=100.00 E-value=9.2e-66 Score=412.28 Aligned_cols=150 Identities=51% Similarity=0.943 Sum_probs=146.7
Q ss_pred CeEeehhHHHHHHHHHhhcccccccccccccccchhhhHHHHHhhhhhhcCCCchhHHHHHHHHHHHHHHhhHHHHHHhh
Q 031747 1 MKLIFLGSSFSIVWYMRHHSIVRRSYNKDQDTFRRFFLVLPCLLLALLINENFTFKEVMWTFSLYLEAVAILPQLVLLQR 80 (153)
Q Consensus 1 mK~~fi~~s~~iiylm~~~~~~~~Ty~~~~D~f~~~~li~p~~vLal~~~~~~~~~eilWtFSiyLEsvAILPQL~mlqk 80 (153)
||++||++|.++||||++ |+|+|||+|+|||+++++++||++||+++||++++.|++||||+|||||||||||+|+||
T Consensus 63 mki~fl~~t~~ivymi~~--k~~~tYd~~~DtFri~~llvp~~vlsl~i~~~~t~~eilWtFsiyLEsVaILPQL~~lq~ 140 (212)
T KOG3106|consen 63 MKIAFLASTLWIVYMIRF--KLRATYDKEKDTFRIEYLLVPSAVLSLLINHSFTILEILWTFSIYLESVAILPQLFMLQK 140 (212)
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHhcccCceeEEEEehhheeeeeeecCCccHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 899999999999999999 589999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccchhhHHHHHHHHHHHHHHhhhhhhhhccCCccchhHhHHHHHHHHHHhceeeeeEeeeeCCcccccCC
Q 031747 81 TRNIDNLTGQYVFFLGAYRGLYILNWVYRYFTELHYVHWIPWISGLVQTLLYADFFYYYFDSWKNNKNLRLPA 153 (153)
Q Consensus 81 ~~~ve~lts~Yv~~LG~yR~ly~~nWi~r~~~~~~~~~~i~~i~giiQt~ly~DFfy~Y~~~~~~G~~~~Lp~ 153 (153)
+||+|++|+||+|+||+||++|++|||+|+.+|+ ++|++++++|++||++||||||+|++++.+|+|++||+
T Consensus 141 tg~~E~~TahYvfaLG~yR~ly~~~WI~r~~~e~-~~~~iai~agiVQT~ly~DFfy~Y~~~v~~g~~~~LP~ 212 (212)
T KOG3106|consen 141 TGEAETITAHYLFALGLYRALYIANWIYRYVTED-FWDPIAIVAGIVQTVLYADFFYLYVTKVLQGKKLKLPA 212 (212)
T ss_pred cCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccchHHHHHHHHHHHHHhHHHHHHHHHHcCCcCCCCC
Confidence 9999999999999999999999999999999988 56999999999999999999999999999999999996
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| >COG5196 ERD2 ER lumen protein retaining receptor [Intracellular trafficking and secretion] | Back alignment and domain information |
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| >PF00810 ER_lumen_recept: ER lumen protein retaining receptor; InterPro: IPR000133 Proteins resident in the lumen of the endoplasmic reticulum (ER) contain a C-terminal tetrapeptide, commonly known as Lys-Asp-Glu-Leu (KDEL) in mammals and His-Asp-Glu-Leu (HDEL) in yeast (Saccharomyces cerevisiae) that acts as a signal for their retrieval from subsequent compartments of the secretory pathway | Back alignment and domain information |
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| >PF04193 PQ-loop: PQ loop repeat | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00