Citrus Sinensis ID: 031771

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150---
Protein Sequence
MWYLESSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWVSLFSLILSQVY
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHcccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccEEEEEEEEccHcHHHHHHHHHccccccccEEEEEEHHcccccEEEEEEHHHHHHHHHHHcccccccHHHHHHHHHHHHHHEHc
Coil and Loop (DISEMBL)
mwylessfqlgggylfglpvgfvadsigATIGAGAAFLLgrtigkpfvisklkdypqfrSVALAIQRSGFKIVLLLRlvpllpfnmLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWVSLFSLILSQVY
Flexible Loop (DISEMBL)
MWYLESSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWVSLFSLILSQVY
Low Complexity Region (SEG)
MWYLESSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIvlllrlvpllpFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWVSLFSLILSQVY
Disordered region (IsUnstruct)
*WYLESSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWVSLFSLILS***
Disordered Region (DISOPRED)
MWYLESSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWVSLFSLILSQVY
Disordered Region (DISEMBL)
MWYLESSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWVSLFSLILSQVY
Disordered Region (DISPRO)
MWYLESSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWVSLFSLILSQVY
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MWYLESSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWVSLFSLILSQVY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	153	2.2.26 [Sep-21-2011]
Q55909	209	TVP38/TMEM64 family membr	N/A	no	0.882	0.645	0.386	8e-20
Q3U145	381	Transmembrane protein 64	yes	no	0.790	0.317	0.325	2e-11
Q6YI46	380	Transmembrane protein 64	yes	no	0.790	0.318	0.308	3e-10
P76219	236	TVP38/TMEM64 family membr	N/A	no	0.666	0.432	0.303	6e-09
Q8L586	287	Uncharacterized membrane	no	no	0.803	0.428	0.306	3e-08
Q0CT01	418	Golgi apparatus membrane	N/A	no	0.790	0.289	0.322	3e-08
A1CW44	418	Golgi apparatus membrane	N/A	no	0.915	0.334	0.285	4e-08
Q4WQJ2	418	Golgi apparatus membrane	yes	no	0.915	0.334	0.278	7e-08
B0Y4Q5	418	Golgi apparatus membrane	N/A	no	0.915	0.334	0.278	7e-08
A1CIM4	419	Golgi apparatus membrane	N/A	no	0.915	0.334	0.278	2e-07

>sp|Q55909|Y305_SYNY3 TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1

 Score = 95.9 bits (237), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 53/137 (38%), Positives = 86/137 (62%), Gaps = 2/137 (1%)

Query: 6   SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
           S   LG G +FG+ +G +   IGAT+GA AAFL+GR + + +V  K+    +F+++  A+
Sbjct: 38  SILTLGAGVVFGVILGSIYVFIGATLGATAAFLVGRYLARGWVAKKIAGNQKFKAIDEAV 97

Query: 66  QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKD 125
            + G KIV+L RL P+ PFN+LNY   +T V L +Y++ S +GM+P T+  VY+G+    
Sbjct: 98  GKEGLKIVILTRLSPVFPFNLLNYAYGITNVSLKDYVIGS-LGMIPGTIMYVYIGSLAGS 156

Query: 126 LSDVTHGWNEFSKT-RW 141
           L+ +    N+ + T +W
Sbjct: 157 LATLGTATNQANPTLQW 173

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q3U145|TMM64_MOUSE Transmembrane protein 64 OS=Mus musculus GN=Tmem64 PE=2 SV=1

 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 70/123 (56%), Gaps = 2/123 (1%)

Query: 8   FQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQR 67
             +  GYL+G  +G     +G  IG   A ++ + +   +V +++++  +  +V   ++ 
Sbjct: 182 LNVAAGYLYGFVLGMGLMVVGVLIGTFIAHVVCKRLLTAWVAARIQNSDKLSAVIRVVEG 241

Query: 68  -SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDL 126
            SG K+V L RL P+ PF + N + S+T VPL  Y++AS  G++P  L   Y+GTTL+ +
Sbjct: 242 GSGLKVVALARLTPI-PFGLQNAVFSITDVPLPSYLMASSAGLLPTQLLNSYLGTTLRTM 300

Query: 127 SDV 129
            DV
Sbjct: 301 EDV 303

Mus musculus (taxid: 10090)

>sp|Q6YI46|TMM64_HUMAN Transmembrane protein 64 OS=Homo sapiens GN=TMEM64 PE=1 SV=2

 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 69/123 (56%), Gaps = 2/123 (1%)

Query: 8   FQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQR 67
             +  GYL+G  +G     +G  IG   A ++ + +   +V ++++   +  +V   ++ 
Sbjct: 181 LNVAAGYLYGFVLGMGLMMVGVLIGTFIAHVVCKRLLTAWVAARIQSSEKLSAVIRVVEG 240

Query: 68  -SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDL 126
            SG K+V L RL P+ PF + N + S+T + L  Y++AS +G++P  L   Y+GTTL+ +
Sbjct: 241 GSGLKVVALARLTPI-PFGLQNAVFSITDLSLPNYLMASSVGLLPTQLLNSYLGTTLRTM 299

Query: 127 SDV 129
            DV
Sbjct: 300 EDV 302

Homo sapiens (taxid: 9606)

>sp|P76219|YDJX_ECOLI TVP38/TMEM64 family membrane protein YdjX OS=Escherichia coli (strain K12) GN=ydjX PE=3 SV=2

 Score = 60.1 bits (144), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 56/102 (54%)

Query: 10  LGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSG 69
           + GG +FG  +G +   I AT+ +  +FLL R +G+  ++  +     F+++   I R+G
Sbjct: 70  IAGGIVFGPLLGTLLSLIAATLASSCSFLLARWLGRDLLLKYVGHSNTFQAIEKGIARNG 129

Query: 70  FKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMP 111
              ++L RL+PL P+N+ NY   +T +    Y L S +  +P
Sbjct: 130 IDFLILTRLIPLFPYNIQNYAYGLTTIAFWPYTLISALTTLP 171

Escherichia coli (strain K12) (taxid: 83333)

>sp|Q8L586|Y4958_ARATH Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana GN=At4g09580 PE=1 SV=1

 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 1/124 (0%)

Query: 12  GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGF- 70
            G LFG+  GFV   + AT GA + F L + +G+P V     +  +F    +A +R    
Sbjct: 137 AGALFGVVRGFVLVVLNATAGACSCFFLSKLVGRPLVNWLWPEKLRFFQAEIAKRRDRLL 196

Query: 71  KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVT 130
             +L LR+ P LP   +N    +  +P   + LA+ +G+MP +   V  G  L DL  V 
Sbjct: 197 NYMLFLRITPTLPNLFINLSSPIVDIPFHVFFLATLVGLMPASYITVRAGLALGDLRSVK 256

Query: 131 HGWN 134
             ++
Sbjct: 257 DLYD 260

Arabidopsis thaliana (taxid: 3702)

>sp|Q0CT01|TVP38_ASPTN Golgi apparatus membrane protein tvp38 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=tvp38 PE=3 SV=1

 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 3/124 (2%)

Query: 6   SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
           S+F    GY+FG+  G++  +    +G+ A+F++ RTI   FV   ++   +F ++AL +
Sbjct: 143 STFGTVAGYIFGVWKGWLLYASATVLGSTASFIVSRTILSKFVHRLMERDKRFAALALTL 202

Query: 66  QRSGFKIVLLLRLVPLLPFNMLNYLLSVTP-VPLLEYMLASWIGMMPITLALVYVGTTLK 124
           +  G K++ ++RL P LP+++ N  +S  P V  L Y LA+ I + P  L   ++G  L+
Sbjct: 203 KYDGLKLLCMIRLCP-LPYSVCNGAVSTFPTVHPLTYGLATAI-ITPKLLVPAFIGNRLR 260

Query: 125 DLSD 128
            LS+
Sbjct: 261 VLSE 264

Golgi membrane protein involved in vesicular trafficking and spindle migration.

Aspergillus terreus (strain NIH 2624 / FGSC A1156) (taxid: 341663)

>sp|A1CW44|TVP38_NEOFI Golgi apparatus membrane protein tvp38 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tvp38 PE=3 SV=1

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 84/147 (57%), Gaps = 7/147 (4%)

Query: 6   SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
           S+F    G++FG+  G++  +    +G+  +F++ RTI   FV   ++   +F ++AL +
Sbjct: 142 STFGTIAGFIFGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTL 201

Query: 66  QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPV--PLLEYMLASWIGMMPITLALVYVGTTL 123
           +  G K++ ++RL P LP+++ N  +S  P   PL+ Y LA+ + + P  L   ++G+ +
Sbjct: 202 KYDGLKLLCMIRLCP-LPYSVCNGAVSTFPTVHPLM-YGLATAL-ITPKLLVPAFIGSRI 258

Query: 124 KDLSDVTHGWNEFSKTRWVSLFSLILS 150
           + LS+     +  SK   V++ S+IL+
Sbjct: 259 RILSEKNEEMSAGSKA--VNICSIILT 283

Golgi membrane protein involved in vesicular trafficking and spindle migration.

Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) (taxid: 331117)

>sp|Q4WQJ2|TVP38_ASPFU Golgi apparatus membrane protein tvp38 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=tvp38 PE=3 SV=1

 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 84/147 (57%), Gaps = 7/147 (4%)

Query: 6   SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
           S+F    G+++G+  G++  +    +G+  +F++ RTI   FV   ++   +F ++AL +
Sbjct: 142 STFGTISGFIYGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTL 201

Query: 66  QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPV--PLLEYMLASWIGMMPITLALVYVGTTL 123
           +  G K++ ++RL P LP+++ N  +S  P   PL+ Y LA+ + + P  L   ++G+ +
Sbjct: 202 KYDGLKLLCMIRLCP-LPYSVCNGAVSTFPTVHPLM-YGLATAL-ITPKLLVPAFIGSRI 258

Query: 124 KDLSDVTHGWNEFSKTRWVSLFSLILS 150
           + LS+     +  SK   V++ S+IL+
Sbjct: 259 RILSEKNEEMSAASKA--VNICSIILT 283

Golgi membrane protein involved in vesicular trafficking and spindle migration.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

>sp|B0Y4Q5|TVP38_ASPFC Golgi apparatus membrane protein tvp38 OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=tvp38 PE=3 SV=1

 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 84/147 (57%), Gaps = 7/147 (4%)

Query: 6   SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
           S+F    G+++G+  G++  +    +G+  +F++ RTI   FV   ++   +F ++AL +
Sbjct: 142 STFGTISGFIYGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTL 201

Query: 66  QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPV--PLLEYMLASWIGMMPITLALVYVGTTL 123
           +  G K++ ++RL P LP+++ N  +S  P   PL+ Y LA+ + + P  L   ++G+ +
Sbjct: 202 KYDGLKLLCMIRLCP-LPYSVCNGAVSTFPTVHPLM-YGLATAL-ITPKLLVPAFIGSRI 258

Query: 124 KDLSDVTHGWNEFSKTRWVSLFSLILS 150
           + LS+     +  SK   V++ S+IL+
Sbjct: 259 RILSEKNEEMSAASKA--VNICSIILT 283

Golgi membrane protein involved in vesicular trafficking and spindle migration.

Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) (taxid: 451804)

>sp|A1CIM4|TVP38_ASPCL Golgi apparatus membrane protein tvp38 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=tvp38 PE=3 SV=1

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 84/147 (57%), Gaps = 7/147 (4%)

Query: 6   SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
           S+F    G++FG+  G++  +    +G+  +F++ RT+   FV   ++   +F ++AL +
Sbjct: 143 STFGTVAGFIFGIWKGWLLYATATVLGSTCSFIVSRTVLSKFVNRMMERDKRFAALALTL 202

Query: 66  QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPV--PLLEYMLASWIGMMPITLALVYVGTTL 123
           +  G K++ ++RL P LP+++ N  +S  P   PL+ Y LA+ I + P  L   ++G+ +
Sbjct: 203 KYDGLKLLCMIRLCP-LPYSVCNGAVSTFPTVHPLM-YGLATAI-ITPKLLVPAFIGSRI 259

Query: 124 KDLSDVTHGWNEFSKTRWVSLFSLILS 150
           + LS+     +  SK   V++ S++L+
Sbjct: 260 RILSEQKGEMSAGSKA--VNICSIVLT 284

Golgi membrane protein involved in vesicular trafficking and spindle migration.

Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) (taxid: 344612)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
388490712	274	unknown [Medicago truncatula]	0.960	0.536	0.790	9e-60
255552219	302	conserved hypothetical protein [Ricinus	0.908	0.460	0.906	1e-58
388493816	227	unknown [Medicago truncatula]	0.888	0.599	0.889	3e-58
388517845	274	unknown [Medicago truncatula]	0.888	0.496	0.889	6e-58
225432530	274	PREDICTED: TVP38/TMEM64 family membrane	0.895	0.5	0.875	6e-57
224107213	275	predicted protein [Populus trichocarpa]	0.869	0.483	0.902	1e-56
356564532	276	PREDICTED: TVP38/TMEM64 family membrane	0.882	0.489	0.807	2e-56
224100323	275	predicted protein [Populus trichocarpa]	0.888	0.494	0.882	2e-56
42561646	274	SNARE associated Golgi protein family [A	0.895	0.5	0.788	2e-56
297848546	274	hypothetical protein ARALYDRAFT_887478 [	0.895	0.5	0.788	2e-56

>gi|388490712|gb|AFK33422.1| unknown [Medicago truncatula]

 Score =  234 bits (597), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 117/148 (79%), Positives = 130/148 (87%), Gaps = 1/148 (0%)

Query: 6   SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
           S   LGGGYLFGLPVG VADS+GATIGA AAFLLG TIGK FV SKLKDYPQF+SV++A 
Sbjct: 68  SVLTLGGGYLFGLPVGIVADSVGATIGAVAAFLLGGTIGKSFVASKLKDYPQFKSVSIAT 127

Query: 66  QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKD 125
           QRSGFKIV LLRLVPLLP+N+LNYLLSVTPVPL EY LASW+GMMP+T+ALVY GTTLKD
Sbjct: 128 QRSGFKIVFLLRLVPLLPYNILNYLLSVTPVPLWEYTLASWLGMMPLTVALVYAGTTLKD 187

Query: 126 LSDVTHGWNEFSKTRWVS-LFSLILSQV 152
           +SDVTHGW EFSKTRW   +FSL++S V
Sbjct: 188 ISDVTHGWGEFSKTRWAMIIFSLVISVV 215

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255552219|ref|XP_002517154.1| conserved hypothetical protein [Ricinus communis] gi|223543789|gb|EEF45317.1| conserved hypothetical protein [Ricinus communis]

 Score =  231 bits (588), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 126/139 (90%), Positives = 132/139 (94%)

Query: 6   SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
           S   LGGGYLFGLPVGFVADSIGAT+GAGAAFLLGRTIG+ FVISKLKDYPQFRSVA+AI
Sbjct: 96  SVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRSFVISKLKDYPQFRSVAIAI 155

Query: 66  QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKD 125
           QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPL EYMLASWIGMMPITLALVYVGTTLKD
Sbjct: 156 QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLGEYMLASWIGMMPITLALVYVGTTLKD 215

Query: 126 LSDVTHGWNEFSKTRWVSL 144
           LSDVTHGW++FS TRWV +
Sbjct: 216 LSDVTHGWSKFSTTRWVCI 234

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388493816|gb|AFK34974.1| unknown [Medicago truncatula]

 Score =  229 bits (583), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 121/136 (88%), Positives = 132/136 (97%)

Query: 6   SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
           S   LGGGYLFGLPVGFVADSIGAT+GAGAAFLLGRTIG+PFV+S+LKDYP+F+SVA+AI
Sbjct: 21  SVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRPFVVSRLKDYPKFKSVAIAI 80

Query: 66  QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKD 125
           +RSGFKIVLLLRLVPLLPFNMLNYLLSVTPV L+EYMLASW+GMMPITLALVYVGTTLKD
Sbjct: 81  RRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVSLVEYMLASWLGMMPITLALVYVGTTLKD 140

Query: 126 LSDVTHGWNEFSKTRW 141
           LSDVTHGWNEFSK+RW
Sbjct: 141 LSDVTHGWNEFSKSRW 156

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388517845|gb|AFK46984.1| unknown [Medicago truncatula]

 Score =  228 bits (581), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 121/136 (88%), Positives = 132/136 (97%)

Query: 6   SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
           S   LGGGYLFGLPVGFVADSIGAT+GAGAAFLLGRTIG+PFV+S+LKDYP+F+SVA+AI
Sbjct: 68  SVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRPFVVSRLKDYPKFKSVAIAI 127

Query: 66  QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKD 125
           +RSGFKIVLLLRLVPLLPFNMLNYLLSVTPV L+EYMLASW+GMMPITLALVYVGTTLKD
Sbjct: 128 RRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVSLVEYMLASWLGMMPITLALVYVGTTLKD 187

Query: 126 LSDVTHGWNEFSKTRW 141
           LSDVTHGWNEFSK+RW
Sbjct: 188 LSDVTHGWNEFSKSRW 203

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432530|ref|XP_002280327.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Vitis vinifera] gi|297736982|emb|CBI26183.3| unnamed protein product [Vitis vinifera]

 Score =  224 bits (572), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 120/137 (87%), Positives = 131/137 (95%)

Query: 6   SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
           S   LGGGYLFGLPVGFVADSIGAT+GAGAAFLLGRTIG+ +VISKLKDYPQFR+VA+AI
Sbjct: 68  SVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRSYVISKLKDYPQFRAVAIAI 127

Query: 66  QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKD 125
           QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVP+ EYMLASW+GMMPITLALVY+GTTLKD
Sbjct: 128 QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPVWEYMLASWLGMMPITLALVYIGTTLKD 187

Query: 126 LSDVTHGWNEFSKTRWV 142
           LSDVTHGW+EFS +RW+
Sbjct: 188 LSDVTHGWHEFSTSRWI 204

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224107213|ref|XP_002314410.1| predicted protein [Populus trichocarpa] gi|222863450|gb|EEF00581.1| predicted protein [Populus trichocarpa]

 Score =  224 bits (570), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/133 (90%), Positives = 129/133 (96%)

Query: 10  LGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSG 69
           LGGGYLFGLP+GFVADSIGATIGAGAAFLLGRTIG+ FV+SKLKDYP+FRSVA+AIQ+SG
Sbjct: 73  LGGGYLFGLPLGFVADSIGATIGAGAAFLLGRTIGRSFVVSKLKDYPKFRSVAIAIQKSG 132

Query: 70  FKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDV 129
           FKIVLLLRLVPLLPFNMLNYLLSVTPVP+ EYMLASWIGMMPITLA VY+GTTLKDLSDV
Sbjct: 133 FKIVLLLRLVPLLPFNMLNYLLSVTPVPIGEYMLASWIGMMPITLAFVYIGTTLKDLSDV 192

Query: 130 THGWNEFSKTRWV 142
           THGW+EFS TRWV
Sbjct: 193 THGWSEFSTTRWV 205

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564532|ref|XP_003550507.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Glycine max]

 Score =  223 bits (569), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 109/135 (80%), Positives = 119/135 (88%)

Query: 6   SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
           S   LGGGYLFGLP+GF+ADSIGAT+GA AAFLLGRTIGK  V+S+LKDYPQFR V +AI
Sbjct: 68  SVLTLGGGYLFGLPIGFIADSIGATVGAVAAFLLGRTIGKSLVVSRLKDYPQFRLVTIAI 127

Query: 66  QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKD 125
           QRSGFKI +LLRL P +PFNMLNYLLSVTPVPL EY LASW+GMMPITLALVYVGTT KD
Sbjct: 128 QRSGFKISILLRLAPFVPFNMLNYLLSVTPVPLGEYTLASWLGMMPITLALVYVGTTFKD 187

Query: 126 LSDVTHGWNEFSKTR 140
           LSDVT GW+EFSKT 
Sbjct: 188 LSDVTRGWSEFSKTH 202

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100323|ref|XP_002311831.1| predicted protein [Populus trichocarpa] gi|222851651|gb|EEE89198.1| predicted protein [Populus trichocarpa]

 Score =  223 bits (568), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 120/136 (88%), Positives = 129/136 (94%)

Query: 6   SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
           S   LGGGYLFGLPVGFVADSIGAT+GAGAAFLLGRTIG+ FV+SKLKDYP+F SVA+AI
Sbjct: 69  SVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRSFVVSKLKDYPKFSSVAIAI 128

Query: 66  QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKD 125
           Q+SGFKIVLLLRLVPLLPFNMLNYLLSVTPVP+ EYMLASWIGMMPITLALVY+GTTLKD
Sbjct: 129 QKSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPIGEYMLASWIGMMPITLALVYIGTTLKD 188

Query: 126 LSDVTHGWNEFSKTRW 141
           LSDVTHGW+EFS TRW
Sbjct: 189 LSDVTHGWSEFSTTRW 204

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42561646|ref|NP_171825.3| SNARE associated Golgi protein family [Arabidopsis thaliana] gi|40823094|gb|AAR92258.1| At1g03260 [Arabidopsis thaliana] gi|44681460|gb|AAS47670.1| At1g03260 [Arabidopsis thaliana] gi|332189430|gb|AEE27551.1| SNARE associated Golgi protein family [Arabidopsis thaliana]

 Score =  223 bits (568), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 108/137 (78%), Positives = 124/137 (90%)

Query: 6   SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
           S   LGGGYLFGLPVGFVADS+GAT+GA AAFLLGRTIGK +V SK+K YP+F++V++AI
Sbjct: 70  SVLTLGGGYLFGLPVGFVADSLGATLGATAAFLLGRTIGKSYVTSKIKHYPKFQAVSVAI 129

Query: 66  QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKD 125
           Q+SGFKIVLLLR+VP+LPFNMLNYLLSVTPV L EYMLA+W+GMMPIT ALVYVGTTLKD
Sbjct: 130 QKSGFKIVLLLRVVPILPFNMLNYLLSVTPVRLGEYMLATWLGMMPITFALVYVGTTLKD 189

Query: 126 LSDVTHGWNEFSKTRWV 142
           LSD+THGW+E S  RWV
Sbjct: 190 LSDITHGWHEVSVFRWV 206

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297848546|ref|XP_002892154.1| hypothetical protein ARALYDRAFT_887478 [Arabidopsis lyrata subsp. lyrata] gi|297337996|gb|EFH68413.1| hypothetical protein ARALYDRAFT_887478 [Arabidopsis lyrata subsp. lyrata]

 Score =  223 bits (567), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 108/137 (78%), Positives = 124/137 (90%)

Query: 6   SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
           S   LGGGYLFGLPVGFVADS+GAT+GA AAFLLGRTIGK +V SK+K YP+F++V++AI
Sbjct: 70  SVLTLGGGYLFGLPVGFVADSLGATLGATAAFLLGRTIGKSYVTSKIKHYPKFQAVSVAI 129

Query: 66  QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKD 125
           Q+SGFKIVLLLR+VP+LPFNMLNYLLSVTPV L EYMLA+W+GMMPIT ALVYVGTTLKD
Sbjct: 130 QKSGFKIVLLLRVVPILPFNMLNYLLSVTPVRLGEYMLATWLGMMPITFALVYVGTTLKD 189

Query: 126 LSDVTHGWNEFSKTRWV 142
           LSD+THGW+E S  RWV
Sbjct: 190 LSDITHGWHEVSVFRWV 206

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
TAIR|locus:2179654	280	AT5G19070 [Arabidopsis thalian	0.960	0.525	0.709	3.5e-52
TAIR|locus:2014530	274	AT1G03260 [Arabidopsis thalian	0.895	0.5	0.722	1.1e-48
TAIR|locus:2017769	344	AT1G22850 "AT1G22850" [Arabido	0.725	0.322	0.315	4e-12
MGI|MGI:2140359	381	Tmem64 "transmembrane protein	0.777	0.312	0.280	2.9e-09
ZFIN|ZDB-GENE-060503-182	348	tmem64 "transmembrane protein	0.777	0.341	0.292	6.6e-09
UNIPROTKB|Q6YI46	380	TMEM64 "Transmembrane protein	0.777	0.313	0.264	1.7e-08
UNIPROTKB|Q9KRB9	229	VC_1723 "Putative uncharacteri	0.758	0.506	0.279	3.3e-08
TIGR_CMR|VC_1723	229	VC_1723 "membrane protein, put	0.758	0.506	0.279	3.3e-08
UNIPROTKB|Q0C554	250	HNE_0409 "Putative membrane pr	0.758	0.464	0.291	4.6e-08
TAIR|locus:2056246	320	AT2G02370 "AT2G02370" [Arabido	0.908	0.434	0.270	1.9e-07

TAIR|locus:2179654 AT5G19070 [Arabidopsis thaliana (taxid:3702)]

 Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
 Identities = 105/148 (70%), Positives = 123/148 (83%)

Query:     6 SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
             S   LGGGYLFGLP+GFVADS+GAT+G+GAAFLLGRTIGKPFV++KLKDYPQF+SVALAI
Sbjct:    68 SVLTLGGGYLFGLPIGFVADSVGATLGSGAAFLLGRTIGKPFVVAKLKDYPQFQSVALAI 127

Query:    66 QRSGFKIXXXXXXXXXXXFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKD 125
             ++SGFKI           F+MLNYLLSVTP+ L  Y+L+SW+GMMPITLALVYVGTTLKD
Sbjct:   128 EKSGFKICLLLRLAPLLPFSMLNYLLSVTPIRLGPYLLSSWLGMMPITLALVYVGTTLKD 187

Query:   126 LSDVTHGWNEFSKTRWVSLFS-LILSQV 152
             LSDVTH W+EFS  RW  L S L++S +
Sbjct:   188 LSDVTHKWSEFSPGRWAFLISSLVISVI 215

GO:0005886 "plasma membrane" evidence=ISM

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2014530 AT1G03260 [Arabidopsis thaliana (taxid:3702)]

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 99/137 (72%), Positives = 113/137 (82%)

Query:     6 SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
             S   LGGGYLFGLPVGFVADS+GAT+GA AAFLLGRTIGK +V SK+K YP+F++V++AI
Sbjct:    70 SVLTLGGGYLFGLPVGFVADSLGATLGATAAFLLGRTIGKSYVTSKIKHYPKFQAVSVAI 129

Query:    66 QRSGFKIXXXXXXXXXXXFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKD 125
             Q+SGFKI           FNMLNYLLSVTPV L EYMLA+W+GMMPIT ALVYVGTTLKD
Sbjct:   130 QKSGFKIVLLLRVVPILPFNMLNYLLSVTPVRLGEYMLATWLGMMPITFALVYVGTTLKD 189

Query:   126 LSDVTHGWNEFSKTRWV 142
             LSD+THGW+E S  RWV
Sbjct:   190 LSDITHGWHEVSVFRWV 206

GO:0005886 "plasma membrane" evidence=ISM

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2017769 AT1G22850 "AT1G22850" [Arabidopsis thaliana (taxid:3702)]

 Score = 168 (64.2 bits), Expect = 4.0e-12, P = 4.0e-12
 Identities = 35/111 (31%), Positives = 59/111 (53%)

Query:    10 LGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSG 69
             +  G LFG  +G +  SI  T+ A  AFL+ R   +  ++  ++D  +F ++  AI  +G
Sbjct:   175 MSAGLLFGPLIGTIIVSISGTMAASVAFLIARYFARERILKLVEDNKKFLAIDKAIGENG 234

Query:    70 FKIXXXXXXXXXXXFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVG 120
             F++           F++ NYL  +T V  + Y+L SW+GM+P + A V  G
Sbjct:   235 FRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPGSWAYVSAG 285

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

MGI|MGI:2140359 Tmem64 "transmembrane protein 64" [Mus musculus (taxid:10090)]

 Score = 143 (55.4 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 34/121 (28%), Positives = 63/121 (52%)

Query:    10 LGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQR-S 68
             +  GYL+G  +G     +G  IG   A ++ + +   +V +++++  +  +V   ++  S
Sbjct:   184 VAAGYLYGFVLGMGLMVVGVLIGTFIAHVVCKRLLTAWVAARIQNSDKLSAVIRVVEGGS 243

Query:    69 GFKIXXXXXXXXXXXFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSD 128
             G K+           F + N + S+T VPL  Y++AS  G++P  L   Y+GTTL+ + D
Sbjct:   244 GLKVVALARLTPIP-FGLQNAVFSITDVPLPSYLMASSAGLLPTQLLNSYLGTTLRTMED 302

Query:   129 V 129
             V
Sbjct:   303 V 303

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-060503-182 tmem64 "transmembrane protein 64" [Danio rerio (taxid:7955)]

 Score = 139 (54.0 bits), Expect = 6.6e-09, P = 6.6e-09
 Identities = 36/123 (29%), Positives = 63/123 (51%)

Query:    10 LGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQR-S 68
             +  GYL+G  +G     +G  IG   A ++ + +   +V+SK+    Q  +V   ++  S
Sbjct:   150 VAAGYLYGFVLGMGLVMVGVLIGTFIAHVVCKRLLTNWVLSKIGSSEQLSAVIRVVEGGS 209

Query:    69 GFKIXXXXXXXXXXXFNMLN--YLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDL 126
             G K+           F + N  + +S+T V L  Y++AS +G++P  L   Y+GTTL+ +
Sbjct:   210 GLKVVALARLTPIP-FGLQNAVFSVSITDVSLPNYLVASSVGLLPTQLLNSYLGTTLRTM 268

Query:   127 SDV 129
              DV
Sbjct:   269 EDV 271

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q6YI46 TMEM64 "Transmembrane protein 64" [Homo sapiens (taxid:9606)]

 Score = 136 (52.9 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 32/121 (26%), Positives = 62/121 (51%)

Query:    10 LGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQR-S 68
             +  GYL+G  +G     +G  IG   A ++ + +   +V ++++   +  +V   ++  S
Sbjct:   183 VAAGYLYGFVLGMGLMMVGVLIGTFIAHVVCKRLLTAWVAARIQSSEKLSAVIRVVEGGS 242

Query:    69 GFKIXXXXXXXXXXXFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSD 128
             G K+           F + N + S+T + L  Y++AS +G++P  L   Y+GTTL+ + D
Sbjct:   243 GLKVVALARLTPIP-FGLQNAVFSITDLSLPNYLMASSVGLLPTQLLNSYLGTTLRTMED 301

Query:   129 V 129
             V
Sbjct:   302 V 302

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9KRB9 VC_1723 "Putative uncharacterized protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 128 (50.1 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 33/118 (27%), Positives = 57/118 (48%)

Query:    12 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFK 71
             G  LFG  +  +  S  +TIGA  AFL  R + + +V +K  D  + +++   I+R G  
Sbjct:    75 GAALFGFWLSLLLASFASTIGATLAFLSSRFLLRDWVQAKFAD--KLQTINQGIERDGAF 132

Query:    72 IXXXXXXXXXXXFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDV 129
                         F ++N ++ +TP+    Y   S +GM+P T   +  GT L ++S +
Sbjct:   133 YLLSLRLIPIFPFFLINLVMGLTPISTWRYYWVSQLGMLPGTAVYLNAGTQLAEISSL 190

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|VC_1723 VC_1723 "membrane protein, putative" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 128 (50.1 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 33/118 (27%), Positives = 57/118 (48%)

Query:    12 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFK 71
             G  LFG  +  +  S  +TIGA  AFL  R + + +V +K  D  + +++   I+R G  
Sbjct:    75 GAALFGFWLSLLLASFASTIGATLAFLSSRFLLRDWVQAKFAD--KLQTINQGIERDGAF 132

Query:    72 IXXXXXXXXXXXFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDV 129
                         F ++N ++ +TP+    Y   S +GM+P T   +  GT L ++S +
Sbjct:   133 YLLSLRLIPIFPFFLINLVMGLTPISTWRYYWVSQLGMLPGTAVYLNAGTQLAEISSL 190

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q0C554 HNE_0409 "Putative membrane protein" [Hyphomonas neptunium ATCC 15444 (taxid:228405)]

 Score = 128 (50.1 bits), Expect = 4.6e-08, P = 4.6e-08
 Identities = 35/120 (29%), Positives = 57/120 (47%)

Query:     6 SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRT-IGKPFVISKLKDYPQFRSVALA 64
             S+  +GGG+LFGL +G  A  IGATIGA   F   +T IG   V+  +   P    +   
Sbjct:    87 SALTIGGGFLFGLALGTPATVIGATIGASILFFASKTSIGA--VLRDVAG-PFLGKMQAG 143

Query:    65 IQRSGFKIXXXXXXXXXXXFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLK 124
                S F             F  +N   ++      +Y++ +++G++P TLA  ++G  +K
Sbjct:   144 FAESPFSYMFALRLIPLFPFAAVNIAPALLGAKYRDYLITTFLGIIPGTLAYTWIGAAVK 203

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2056246 AT2G02370 "AT2G02370" [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 1.9e-07, P = 1.9e-07
 Identities = 39/144 (27%), Positives = 65/144 (45%)

Query:    13 GYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVA-LAIQRSGFK 71
             G +FG  +GFV   +G TIG    +L+G    +  +   LK +P+  +V  LA + S F 
Sbjct:   127 GMIFGYGLGFVIIMVGTTIGMVLPYLIGLMF-RDRLHQWLKRWPRQAAVLRLAAEGSWFH 185

Query:    72 IXXXXXXXXXXXF--NMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDV 129
                         F   + NY + VT +    Y   S  GM+P     +Y G  ++  +DV
Sbjct:   186 QFRVVAIFRVSPFPYTIFNYAIVVTSMRFWPYFFGSIAGMIPEAFIYIYSGRLIRTFADV 245

Query:   130 THGWNEFSKTRWV-SLFSLILSQV 152
              +G    +    V ++ SL+++ V
Sbjct:   246 QYGHQRLTTVEIVYNVISLVIAVV 269

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	153
COG0398	223	COG0398, COG0398, Uncharacterized conserved protei	5e-22
pfam09335	123	pfam09335, SNARE_assoc, SNARE associated Golgi pro	4e-19

>gnl|CDD|223475 COG0398, COG0398, Uncharacterized conserved protein [Function unknown]

 Score = 87.4 bits (217), Expect = 5e-22
 Identities = 40/119 (33%), Positives = 72/119 (60%)

Query: 8   FQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQR 67
             L GG LFG  +GF+   IGAT G+  AFLL R +G+ +V+  +    + + +   ++R
Sbjct: 71  LTLAGGLLFGPFLGFLYSLIGATAGSTLAFLLARYLGRDWVLKFVGGKEKVQRIDAGLER 130

Query: 68  SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDL 126
           +GF  +LLLRL+P+ PF+++NY   +T +   ++ +A+ +G +P T+   Y+G+    +
Sbjct: 131 NGFWAILLLRLIPIFPFDLVNYAAGLTGISFRDFAIATLLGKLPGTIVYTYLGSAFLGI 189

Length = 223

>gnl|CDD|220186 pfam09335, SNARE_assoc, SNARE associated Golgi protein

 Score = 77.3 bits (191), Expect = 4e-19
 Identities = 39/118 (33%), Positives = 71/118 (60%), Gaps = 3/118 (2%)

Query: 6   SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFR---SVA 62
           +   +  G LFG  +GF+   +GA +G+  A+LLGR +G+  +  +L     F+    V 
Sbjct: 4   TVLLIAAGALFGPWLGFLVALLGALLGSLLAYLLGRYLGRRALRRRLLKEKAFQRLQRVE 63

Query: 63  LAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVG 120
             ++R GFK +LLLRL+P +P +++NY+  ++ V    ++L +++G++P  L  VY+G
Sbjct: 64  RLVERYGFKALLLLRLLPGVPRDLVNYVAGLSRVSFRRFLLGTFLGILPWALLYVYLG 121

This is a family of SNARE associated Golgi proteins. The yeast member of this family localises with the t-SNARE Tlg2. Length = 123

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	153
COG0586	208	DedA Uncharacterized membrane-associated protein [	99.96
COG0398	223	Uncharacterized conserved protein [Function unknow	99.96
PF09335	123	SNARE_assoc: SNARE associated Golgi protein; Inter	99.95
PRK10847	219	hypothetical protein; Provisional	99.94
COG1238	161	Predicted membrane protein [Function unknown]	99.71
KOG3140	275	consensus Predicted membrane protein [Function unk	99.61
PF06695	121	Sm_multidrug_ex: Putative small multi-drug export	97.99
PRK01844	72	hypothetical protein; Provisional	94.24
PRK00523	72	hypothetical protein; Provisional	93.07
PRK11677	134	hypothetical protein; Provisional	92.32
PF03672	64	UPF0154: Uncharacterised protein family (UPF0154);	89.26
COG3763	71	Uncharacterized protein conserved in bacteria [Fun	88.2
PF07155	169	ECF-ribofla_trS: ECF-type riboflavin transporter,	85.5
PF06295	128	DUF1043: Protein of unknown function (DUF1043); In	83.36
PRK09609	312	hypothetical protein; Provisional	83.0
TIGR02359	160	thiW thiW protein. Levels of thiamine pyrophosphat	82.2
PRK10847	219	hypothetical protein; Provisional	81.55
PRK13661	182	hypothetical protein; Provisional	81.04
COG0575	265	CdsA CDP-diglyceride synthetase [Lipid metabolism]	80.68

>COG0586 DedA Uncharacterized membrane-associated protein [Function unknown]

Probab=99.96  E-value=4.7e-29  Score=184.74  Aligned_cols=128  Identities=20%  Similarity=0.368  Sum_probs=121.1

Q ss_pred             CccchHHHHHHHHhh-----hhhHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhhc----CchHHHHHHHHHhcchhH
Q 031771            1 MWYLESSFQLGGGYL-----FGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLK----DYPQFRSVALAIQRSGFK   71 (153)
Q Consensus         1 ~p~P~~~~~~~~G~l-----fg~~~~~~~~~~g~~lG~~~~y~igr~~g~~~~~~~~~----~~~~~~~~~~~~~~~g~~   71 (153)
                      .|+|++++++++|++     ++++..++.+++|+++||.++|++||++|++..+++.+    ++++++|.+++++|||.+
T Consensus        34 ~~lPge~iL~~~G~l~~~g~~~~~~~i~~~~lga~lGd~i~Y~iGr~~G~~~l~~~~~~~~~~~~~l~~a~~~f~r~G~~  113 (208)
T COG0586          34 PPLPGEVLLLLAGALAAQGKLNLWLVILVATLGALLGDLISYWIGRRFGRKLLRKLWSYRLLKRKKLDKAELLFERHGLF  113 (208)
T ss_pred             CCCCchHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHHHhhhhhccCCHHHHHHHHHHHHHcCch
Confidence            489999999999999     78899999999999999999999999999998887655    578999999999999999


Q ss_pred             hhHHHhhcCCCChhhHHHHhhcCCCChhHHHHHHHHhHHHHHHHHHHHHhhhhccccc
Q 031771           72 IVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDV  129 (153)
Q Consensus        72 ~~~~~r~~P~~p~~~~~~~aG~~~~~~~~f~~~~~lg~~~~~~~~~~~G~~~~~~~~~  129 (153)
                      .++++||+|++| +++++.||++|||+++|..+|.+|+++|..++++.|+.+++..+.
T Consensus       114 ~vf~~RFip~vR-t~ip~~AG~~~m~~~~F~~~n~~ga~iW~~~~~~lGy~~G~~~~~  170 (208)
T COG0586         114 AIFLGRFIPGVR-TLVPIVAGMSKMPLRRFLLYNILGALLWALVLTLLGYLLGEVIDV  170 (208)
T ss_pred             hhhhhcccchhH-hhhhHhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHhccchHH
Confidence            999999999999 999999999999999999999999999999999999999987663

>COG0398 Uncharacterized conserved protein [Function unknown]

Probab=99.96  E-value=1.4e-27  Score=178.08  Aligned_cols=120  Identities=34%  Similarity=0.687  Sum_probs=117.5

Q ss_pred             ccchHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhhcCchHHHHHHHHHhcchhHhhHHHhhcCC
Q 031771            2 WYLESSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPL   81 (153)
Q Consensus         2 p~P~~~~~~~~G~lfg~~~~~~~~~~g~~lG~~~~y~igr~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~r~~P~   81 (153)
                      ++|++++++++|++||++.|.+++++|+++|+.++|+++|+.++|+.+++.+++++.++.+++++|+|++.+++.|++|+
T Consensus        65 ~iP~~il~l~~g~ifG~~~G~~~s~~G~~~gs~~~Fll~R~~gr~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~lrl~P~  144 (223)
T COG0398          65 IIPGSILTLAGGLLFGPFLGFLYSLIGATAGSTLAFLLARYLGRDWVLKFVGGKEKVQRIDAGLERNGFWAILLLRLIPI  144 (223)
T ss_pred             cCcHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccHHHHHHHHHHHhCChHHHHHHHHhhc
Confidence            68999999999999999999999999999999999999999999999988888899999999999999999999999999


Q ss_pred             CChhhHHHHhhcCCCChhHHHHHHHHhHHHHHHHHHHHHh
Q 031771           82 LPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGT  121 (153)
Q Consensus        82 ~p~~~~~~~aG~~~~~~~~f~~~~~lg~~~~~~~~~~~G~  121 (153)
                      +|++++||++|.+++|+++|.+++.+|++|.+..|+++|+
T Consensus       145 ~P~~lvn~aaglt~is~~~f~ias~lG~~P~~i~y~~~G~  184 (223)
T COG0398         145 FPFDLVNYAAGLTGISFRDFAIATLLGKLPGTIVYTYLGS  184 (223)
T ss_pred             CCHHHHHHHHhccCCcHHHHHHHHHHhcccHHHHHHHHHH
Confidence            9999999999999999999999999999999999999997

>PF09335 SNARE_assoc: SNARE associated Golgi protein; InterPro: IPR015414 This is a entry contains SNARE associated Golgi proteins

Probab=99.95  E-value=2.5e-27  Score=161.54  Aligned_cols=119  Identities=34%  Similarity=0.633  Sum_probs=110.8

Q ss_pred             cchHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhhcCchHHHH---HHHHHhcchhHhhHHHhhc
Q 031771            3 YLESSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRS---VALAIQRSGFKIVLLLRLV   79 (153)
Q Consensus         3 ~P~~~~~~~~G~lfg~~~~~~~~~~g~~lG~~~~y~igr~~g~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~r~~   79 (153)
                      +|++++++++|+++|++.+++++.+|+++|+.++|++||+++++..+++..++++.++   .++.++|||.+.+++.|++
T Consensus         1 iP~~~~~~~~g~~~g~~~~~~~~~~g~~~g~~~~y~lgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~   80 (123)
T PF09335_consen    1 IPGSILLIAAGALFGPWLGFLIATLGAVLGSLLAYLLGRYFGRRRLRRKLRKKKRIKRIERIERWFQKYGFWVLFLSRFI   80 (123)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence            6999999999999999999999999999999999999999997667666665555555   8999999999999999999


Q ss_pred             CCCChhhHHHHhhcCCCChhHHHHHHHHhHHHHHHHHHHHHh
Q 031771           80 PLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGT  121 (153)
Q Consensus        80 P~~p~~~~~~~aG~~~~~~~~f~~~~~lg~~~~~~~~~~~G~  121 (153)
                      |++|++++|+++|++++|+++|+.++++|.+||+.+++++|+
T Consensus        81 P~~P~~~~~~~ag~~~~~~~~f~~~~~~g~~~~~~~~~~~G~  122 (123)
T PF09335_consen   81 PGLPFDVVNYLAGITRMPFRRFFLASLIGKLPWTILYVLLGY  122 (123)
T ss_pred             HHccHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999997

The yeast member of this family (P36164 from SWISSPROT) localises with the t-SNARE Tlg2 [].

>PRK10847 hypothetical protein; Provisional

Probab=99.94  E-value=3.4e-26  Score=170.74  Aligned_cols=125  Identities=17%  Similarity=0.290  Sum_probs=113.3

Q ss_pred             ccchHHHHHHHHhhh-------hhHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHh---hcCchHHHHHHHHHhcchhH
Q 031771            2 WYLESSFQLGGGYLF-------GLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISK---LKDYPQFRSVALAIQRSGFK   71 (153)
Q Consensus         2 p~P~~~~~~~~G~lf-------g~~~~~~~~~~g~~lG~~~~y~igr~~g~~~~~~~---~~~~~~~~~~~~~~~~~g~~   71 (153)
                      |+|++.+.+++|.+.       +++..++++++|+.+|+.++|++||+.|++..+++   ..++++++|.+++++|||.+
T Consensus        48 ~lPge~~l~~~G~la~~~~~~~~~~~~~~~a~~Ga~lG~~i~Y~lGr~~G~~~l~~~~~~~~~~~~l~~~~~~~~r~G~~  127 (219)
T PRK10847         48 FLPGDSLLFVAGALASLPTNDLNVHMMVALMLIAAIVGDAVNYTIGRLFGEKLFSNPNSKIFRRSYLDKTHQFYEKHGGK  127 (219)
T ss_pred             CCCchHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHhhccccccCCHHHHHHHHHHHHHcCCE
Confidence            689999999999884       35678899999999999999999999999887532   22457799999999999999


Q ss_pred             hhHHHhhcCCCChhhHHHHhhcCCCChhHHHHHHHHhHHHHHHHHHHHHhhhhccc
Q 031771           72 IVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLS  127 (153)
Q Consensus        72 ~~~~~r~~P~~p~~~~~~~aG~~~~~~~~f~~~~~lg~~~~~~~~~~~G~~~~~~~  127 (153)
                      .++++|++|++| +++++.+|++|||+++|+..|.+|+++|+..++.+|+.+++..
T Consensus       128 ~v~i~RfiP~~R-~~~~~~aG~~~m~~~~F~~~~~lg~~~W~~~~~~~Gy~~g~~~  182 (219)
T PRK10847        128 TIILARFVPIVR-TFAPFVAGMGHMSYRHFAAYNVIGALLWVLLFTYAGYFFGTLP  182 (219)
T ss_pred             EEEeeCCccchH-hHHHHHhHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence            999999999999 8999999999999999999999999999999999999998764

>COG1238 Predicted membrane protein [Function unknown]

Probab=99.71  E-value=2.8e-16  Score=111.36  Aligned_cols=122  Identities=16%  Similarity=0.154  Sum_probs=105.7

Q ss_pred             CccchHHHHHHHHhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhhc-CchHHHHHHH-HHhcchhHhhHHHh
Q 031771            1 MWYLESSFQLGGGYL-FGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLK-DYPQFRSVAL-AIQRSGFKIVLLLR   77 (153)
Q Consensus         1 ~p~P~~~~~~~~G~l-fg~~~~~~~~~~g~~lG~~~~y~igr~~g~~~~~~~~~-~~~~~~~~~~-~~~~~g~~~~~~~r   77 (153)
                      +|+|.|++.+..-.. .+++.-.+++++|+++|+.+.|++||+.++...+++.. ++++.++.++ +++|+|.+.++++-
T Consensus        33 lP~~sE~~l~~m~~~~~~~~~~~~vAt~gs~lG~~~~y~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ryg~~~ll~s~  112 (161)
T COG1238          33 LPVPSEVLLAPMLLLGLNAWILALVATLGSVLGGLVNYALGRFLPEFIARRWFPGSEEALEKLQEKWYRRYGVWTLLLSW  112 (161)
T ss_pred             cCCChHHHHHHHHHcCCchHHHHHHHHHHhhHhHHHHHHHHhcchHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            599999877665555 88999999999999999999999999998876665443 3577777776 89999999999999


Q ss_pred             hcCCCChhhHHHHhhcCCCChhHHHHHHHHhHHHHHHHHHHHHhhhh
Q 031771           78 LVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLK  124 (153)
Q Consensus        78 ~~P~~p~~~~~~~aG~~~~~~~~f~~~~~lg~~~~~~~~~~~G~~~~  124 (153)
                      +.| +| ++++.+||..|+|+++|+....+|+..+....+++....+
T Consensus       113 lp~-ig-d~~t~~aG~~~~~~~~f~~~~~igk~~Ry~~la~~~~~~~  157 (161)
T COG1238         113 LPP-IG-DVLTLLAGWLRLNFLPFILLVFLGKAARYLLLAALTLLGG  157 (161)
T ss_pred             ccc-cc-hHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            866 89 9999999999999999999999999999999998876544

>KOG3140 consensus Predicted membrane protein [Function unknown]

Probab=99.61  E-value=1.6e-15  Score=115.68  Aligned_cols=137  Identities=28%  Similarity=0.481  Sum_probs=117.3

Q ss_pred             CccchH-HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhhcCchHHHHHHHHHhcch-hHhhHHHhh
Q 031771            1 MWYLES-SFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSG-FKIVLLLRL   78 (153)
Q Consensus         1 ~p~P~~-~~~~~~G~lfg~~~~~~~~~~g~~lG~~~~y~igr~~g~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~r~   78 (153)
                      +++|+. .+.+.+|.+||.+.|+++++..+.+|+++||.+++.++|+++.++++++.+.-+.+...+|++ +..+.+.|+
T Consensus       110 faipG~~fls~~aG~l~~~~~g~~Lv~~~~~~ga~~cy~lS~~f~r~~v~~l~p~~~~~~~~~~~~~~~~~~~~~~~lrl  189 (275)
T KOG3140|consen  110 FAIPGSIFLSLLAGALFGVFKGVLLVCLLSTLGASLCYLLSKLFGRPLVLKLFPDKIAFLQQDVELNRNSLLNYMLFLRL  189 (275)
T ss_pred             cccccHHHHHHHHHHhhccceEEeeeeeccchhHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHHHhcccchhhhhhhhhh
Confidence            367864 789999999999999999999999999999999999999999988775333333333345555 566899999


Q ss_pred             cCCCChhhHHHHhhcCCCChhHHHHHHHHhHHHHHHHHHHHHhhhhcccccccCCcccc
Q 031771           79 VPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFS  137 (153)
Q Consensus        79 ~P~~p~~~~~~~aG~~~~~~~~f~~~~~lg~~~~~~~~~~~G~~~~~~~~~~~~~~~~~  137 (153)
                      .|..|+.+.|+++++.+++.+.|++++++|.+|.+++++-.|..+++.++..+..+..+
T Consensus       190 sp~~pnw~~n~~spvl~Vp~~~f~~~~~~gl~p~s~i~v~ags~l~~l~s~~~~~~~~~  248 (275)
T KOG3140|consen  190 SPFLPNWVINIVSPVLGVPLRIFFIGTFKGLIPYSFIEVRAGSTLASLTSASDAFSWSS  248 (275)
T ss_pred             ccCCHHHHHHHHHHhhccchHHHHHHHHHhcCchHHHHhhccchHhhhcccccccCCcc
Confidence            99999999999999999999999999999999999999999999998887776665443

>PF06695 Sm_multidrug_ex: Putative small multi-drug export protein; InterPro: IPR009577 This family contains a small number of putative small multi-drug export proteins

Probab=97.99  E-value=0.00017  Score=49.03  Aligned_cols=99  Identities=14%  Similarity=0.061  Sum_probs=73.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhChHH-----HHHhhcC-chHHHHHHHHHhcchhHhhHHHhhcC--CCChhhH
Q 031771           16 FGLPVGFVADSIGATIGAGAAFLLGRTIGKPF-----VISKLKD-YPQFRSVALAIQRSGFKIVLLLRLVP--LLPFNML   87 (153)
Q Consensus        16 fg~~~~~~~~~~g~~lG~~~~y~igr~~g~~~-----~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~r~~P--~~p~~~~   87 (153)
                      ++++.+.+++.+|+++-....++.-++.-+-.     .++..++ ++|.++-++..+|||+..+.+.=.+|  +.--..-
T Consensus        14 l~p~~~~~~~~lGN~l~vp~i~~~~~~i~~~l~~~~~~~~~~~~~~~k~~~~~~~i~kyg~~GL~lFVaIPlP~TG~wtg   93 (121)
T PF06695_consen   14 LPPWEAFLLAFLGNILPVPFILLFLDKILKWLKRKPWLKKFYEWLEKKAEKKSKKIEKYGFWGLALFVAIPLPGTGAWTG   93 (121)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcchHHHH
Confidence            67889999999999998888877777664321     1111111 34566677889999998887766666  3335677


Q ss_pred             HHHhhcCCCChhHHHHHHHHhHHHHHH
Q 031771           88 NYLLSVTPVPLLEYMLASWIGMMPITL  114 (153)
Q Consensus        88 ~~~aG~~~~~~~~f~~~~~lg~~~~~~  114 (153)
                      +.++-+.+++.++=+.+..+|.+.+..
T Consensus        94 al~a~llg~~~~~~~~ai~~Gv~ia~~  120 (121)
T PF06695_consen   94 ALIASLLGMDKKKAFLAIFLGVLIAGV  120 (121)
T ss_pred             HHHHHHhCCCHHHHHHHHHHHHHHHHh
Confidence            888889999999999999999887654

>PRK01844 hypothetical protein; Provisional

Probab=94.24  E-value=0.29  Score=30.04  Aligned_cols=34  Identities=12%  Similarity=0.323  Sum_probs=27.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHh
Q 031771           18 LPVGFVADSIGATIGAGAAFLLGRTIGKPFVISK   51 (153)
Q Consensus        18 ~~~~~~~~~~g~~lG~~~~y~igr~~g~~~~~~~   51 (153)
                      .+..+++.+++..+|...+|+++|+.-++.+++.
T Consensus         3 ~~~~I~l~I~~li~G~~~Gff~ark~~~k~lk~N   36 (72)
T PRK01844          3 IWLGILVGVVALVAGVALGFFIARKYMMNYLQKN   36 (72)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence            4556677788999999999999999877766654

>PRK00523 hypothetical protein; Provisional

Probab=93.07  E-value=0.61  Score=28.61  Aligned_cols=33  Identities=6%  Similarity=0.045  Sum_probs=25.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHh
Q 031771           19 PVGFVADSIGATIGAGAAFLLGRTIGKPFVISK   51 (153)
Q Consensus        19 ~~~~~~~~~g~~lG~~~~y~igr~~g~~~~~~~   51 (153)
                      +..+++.+++..+|...+|+++|+.-++.+++.
T Consensus         5 ~l~I~l~i~~li~G~~~Gffiark~~~k~l~~N   37 (72)
T PRK00523          5 GLALGLGIPLLIVGGIIGYFVSKKMFKKQIREN   37 (72)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence            345566678889999999999999877666644

>PRK11677 hypothetical protein; Provisional

Probab=92.32  E-value=0.38  Score=33.29  Aligned_cols=25  Identities=16%  Similarity=0.081  Sum_probs=20.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhChH
Q 031771           22 FVADSIGATIGAGAAFLLGRTIGKP   46 (153)
Q Consensus        22 ~~~~~~g~~lG~~~~y~igr~~g~~   46 (153)
                      ++++.+|-++|..++|+++|...+.
T Consensus         3 W~~a~i~livG~iiG~~~~R~~~~~   27 (134)
T PRK11677          3 WEYALIGLVVGIIIGAVAMRFGNRK   27 (134)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccch
Confidence            4667788899999999999986543

>PF03672 UPF0154: Uncharacterised protein family (UPF0154); InterPro: IPR005359 The proteins in this entry are functionally uncharacterised

Probab=89.26  E-value=1.3  Score=26.65  Aligned_cols=28  Identities=14%  Similarity=0.178  Sum_probs=21.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhChHHHHHh
Q 031771           24 ADSIGATIGAGAAFLLGRTIGKPFVISK   51 (153)
Q Consensus        24 ~~~~g~~lG~~~~y~igr~~g~~~~~~~   51 (153)
                      +..++..+|..++|+++|+..++.+++.
T Consensus         2 ~iilali~G~~~Gff~ar~~~~k~l~~N   29 (64)
T PF03672_consen    2 LIILALIVGAVIGFFIARKYMEKQLKEN   29 (64)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence            3456778889999999999877666543

>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=88.20  E-value=2.5  Score=25.77  Aligned_cols=33  Identities=15%  Similarity=0.122  Sum_probs=24.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHH
Q 031771           18 LPVGFVADSIGATIGAGAAFLLGRTIGKPFVIS   50 (153)
Q Consensus        18 ~~~~~~~~~~g~~lG~~~~y~igr~~g~~~~~~   50 (153)
                      .|.+++...++-..|-..+|+++|+.-++.+.+
T Consensus         3 l~lail~ivl~ll~G~~~G~fiark~~~k~lk~   35 (71)
T COG3763           3 LWLAILLIVLALLAGLIGGFFIARKQMKKQLKD   35 (71)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            456667777777888888899999876655544

>PF07155 ECF-ribofla_trS: ECF-type riboflavin transporter, S component; InterPro: IPR009825 This family consists of several bacterial proteins of around 180 residues in length that appear to be multi-pass membrane proteins

Probab=85.50  E-value=1.6  Score=30.83  Aligned_cols=33  Identities=27%  Similarity=0.336  Sum_probs=29.4

Q ss_pred             chHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 031771            4 LESSFQLGGGYLFGLPVGFVADSIGATIGAGAA   36 (153)
Q Consensus         4 P~~~~~~~~G~lfg~~~~~~~~~~g~~lG~~~~   36 (153)
                      |++.....+|.+||+..|.++..+|..++|.+.
T Consensus        37 ~~~~~i~l~~~l~Gp~~G~ivg~ig~~l~dll~   69 (169)
T PF07155_consen   37 LGSIPIILAGLLFGPKYGAIVGAIGDLLSDLLS   69 (169)
T ss_pred             hhhHHHHHHHHHHChHHHHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999998844

The function of this family is unknown.; GO: 0016020 membrane

>PF06295 DUF1043: Protein of unknown function (DUF1043); InterPro: IPR009386 This entry consists of several hypothetical bacterial proteins of unknown function

Probab=83.36  E-value=3  Score=28.49  Aligned_cols=22  Identities=32%  Similarity=0.513  Sum_probs=17.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhChH
Q 031771           25 DSIGATIGAGAAFLLGRTIGKP   46 (153)
Q Consensus        25 ~~~g~~lG~~~~y~igr~~g~~   46 (153)
                      +++|.++|..++|+++|...+.
T Consensus         2 ~~i~lvvG~iiG~~~~r~~~~~   23 (128)
T PF06295_consen    2 AIIGLVVGLIIGFLIGRLTSSN   23 (128)
T ss_pred             hHHHHHHHHHHHHHHHHHhccc
Confidence            4677888888888998887654

>PRK09609 hypothetical protein; Provisional

Probab=83.00  E-value=8.9  Score=30.32  Aligned_cols=27  Identities=26%  Similarity=0.336  Sum_probs=20.3

Q ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHH
Q 031771            7 SFQLGGGYLFGLPVGFVADSIGATIGA   33 (153)
Q Consensus         7 ~~~~~~G~lfg~~~~~~~~~~g~~lG~   33 (153)
                      +....+|.+|||..|.++..+...+|.
T Consensus        45 IPviI~G~LFGPv~G~ivG~lsDLLs~   71 (312)
T PRK09609         45 LPIKITGFIFGPIVGFFTGLLSDLISF   71 (312)
T ss_pred             HHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence            557788889998888877777666553

>TIGR02359 thiW thiW protein

Probab=82.20  E-value=3  Score=29.78  Aligned_cols=33  Identities=12%  Similarity=0.071  Sum_probs=28.8

Q ss_pred             chHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 031771            4 LESSFQLGGGYLFGLPVGFVADSIGATIGAGAA   36 (153)
Q Consensus         4 P~~~~~~~~G~lfg~~~~~~~~~~g~~lG~~~~   36 (153)
                      ++++..+.+|.++||+++.+.+.+++.+++...
T Consensus        33 ~~~i~~vlaavllGP~~g~~~a~i~~ll~~l~~   65 (160)
T TIGR02359        33 VQHFVNVIAGVLLGPWYALAVAFIIGLLRNTLG   65 (160)
T ss_pred             hhHHHHHHHHHHHchHHHHHHHHHHHHHHHHhC
Confidence            357899999999999999999999998887754

Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved,to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.

>PRK10847 hypothetical protein; Provisional

Probab=81.55  E-value=11  Score=27.98  Aligned_cols=66  Identities=14%  Similarity=0.212  Sum_probs=46.6

Q ss_pred             HHHHHHhcchhHh---hHHHhh-------cCCCChhhHHHHhhcC------CCChhHHHHHHHHhHHHHHHHHHHHHhhh
Q 031771           60 SVALAIQRSGFKI---VLLLRL-------VPLLPFNMLNYLLSVT------PVPLLEYMLASWIGMMPITLALVYVGTTL  123 (153)
Q Consensus        60 ~~~~~~~~~g~~~---~~~~r~-------~P~~p~~~~~~~aG~~------~~~~~~f~~~~~lg~~~~~~~~~~~G~~~  123 (153)
                      .+++.++++|.+.   +++.-+       .|.+|.+.+-..+|..      .+++..-+..+.+|+.....+.-++|+..
T Consensus        17 ~~~~~~~~~g~~~y~~lfl~~~le~~~~~~~~lPge~~l~~~G~la~~~~~~~~~~~~~~~a~~Ga~lG~~i~Y~lGr~~   96 (219)
T PRK10847         17 HLAELVAQYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLPTNDLNVHMMVALMLIAAIVGDAVNYTIGRLF   96 (219)
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHhccccCCCCCchHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3455667777543   333322       4778988888877743      26777778888899999999999999887


Q ss_pred             hc
Q 031771          124 KD  125 (153)
Q Consensus       124 ~~  125 (153)
                      ++
T Consensus        97 G~   98 (219)
T PRK10847         97 GE   98 (219)
T ss_pred             CH
Confidence            54

>PRK13661 hypothetical protein; Provisional

Probab=81.04  E-value=3.7  Score=29.93  Aligned_cols=33  Identities=33%  Similarity=0.356  Sum_probs=29.4

Q ss_pred             chHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 031771            4 LESSFQLGGGYLFGLPVGFVADSIGATIGAGAA   36 (153)
Q Consensus         4 P~~~~~~~~G~lfg~~~~~~~~~~g~~lG~~~~   36 (153)
                      |++......+.+||+..|.++..+|..++|.+.
T Consensus        39 ~~~~~i~l~a~lfGp~~G~lvg~ig~~L~dll~   71 (182)
T PRK13661         39 LAYAFLALFAVLFGPVVGFLVGFIGHALKDFIA   71 (182)
T ss_pred             eHHHHHHHHHHHHChHHHHHHHHHHHHHHHHHc
Confidence            457889999999999999999999999999873

>COG0575 CdsA CDP-diglyceride synthetase [Lipid metabolism]

Probab=80.68  E-value=1.3  Score=33.98  Aligned_cols=31  Identities=26%  Similarity=0.426  Sum_probs=24.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhChHHHHHhh
Q 031771           22 FVADSIGATIGAGAAFLLGRTIGKPFVISKL   52 (153)
Q Consensus        22 ~~~~~~g~~lG~~~~y~igr~~g~~~~~~~~   52 (153)
                      .+...++...+|+.+|+.||++|++.+..+.
T Consensus       136 ~l~l~~~vw~~Di~Ayf~Gr~fGk~kl~p~i  166 (265)
T COG0575         136 LLLLFLGVWAGDIGAYFVGRRFGKHKLAPKI  166 (265)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHcCCCCCCCcC
Confidence            4556788999999999999999987544333

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00