Citrus Sinensis ID: 031930

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Protein Sequence
MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIQKLQLRRLLLKVLFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTVLLLSLIVFW
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcHHHHHHcccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccHHEEEEEEEcccEEEEEc
Coil and Loop (DISEMBL)
MGSIAKKGLQQYLIQLQqhplrtkaITAGVLSAISDIVAQKLTGIQKLQLRRLLLKVLFGcaylgpfgHFLHLILDKIfkgkkdtsTVAKKVVLEQltsspwnnLMFMIYYGVVvegrpwrdvktkikkdyptvqytSWTVLLLSLIVFW
Flexible Loop (DISEMBL)
mgsiakkgLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIQKLQLRRLLLKVLFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLeqltsspwnnlMFMIYYGVVVEGRPWRDVKTkikkdyptvqytswTVLLLSLIVFW
Low Complexity Region (SEG)
MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIqklqlrrlllkVLFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTVLLLSLIVFW
Disordered region (IsUnstruct)
********LQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIQKLQLRRLLLKVLFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTVLLLSLIVFW
Disordered Region (DISOPRED)
****AKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIQKLQLRRLLLKVLFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTVLLLSLIVFW
Disordered Region (DISEMBL)
MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIQKLQLRRLLLKVLFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTVLLLSLIVFW
Disordered Region (DISPRO)
*GSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIQKLQLRRLLLKVLFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTVLLLSLIVFW
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIQKLQLRRLLLKVLFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTVLLLSLIVFW
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	150	2.2.26 [Sep-21-2011]
Q9ZS51	190	Peroxisomal membrane prot	no	no	0.933	0.736	0.704	1e-51
Q54GD8	184	PXMP2/4 family protein 3	yes	no	0.873	0.711	0.321	2e-11
Q54FR4	185	PXMP2/4 family protein 4	no	no	0.866	0.702	0.330	4e-11
Q2KIY1	196	Peroxisomal membrane prot	yes	no	0.92	0.704	0.275	1e-09
Q5BK62	176	Protein Mpv17 OS=Rattus n	yes	no	0.853	0.727	0.300	3e-09
P19258	176	Protein Mpv17 OS=Mus musc	yes	no	0.853	0.727	0.293	5e-09
Q07066	194	Peroxisomal membrane prot	no	no	0.92	0.711	0.283	9e-09
P39210	176	Protein Mpv17 OS=Homo sap	yes	no	0.853	0.727	0.293	1e-08
Q2KIN6	176	Protein Mpv17 OS=Bos taur	no	no	0.853	0.727	0.270	9e-08
Q9NR77	195	Peroxisomal membrane prot	no	no	0.506	0.389	0.304	2e-06

>sp|Q9ZS51|PMP22_ARATH Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana GN=PMP22 PE=1 SV=1

 Score =  201 bits (512), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 100/142 (70%), Positives = 116/142 (81%), Gaps = 2/142 (1%)

Query: 1   MGSIAKK--GLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIQKLQLRRLLLKVL 58
           MGS   K   LQ+YL QLQQHPLRTKAITAGVLS +SD+V+QKL+GIQK+QLRR+LLKV+
Sbjct: 1   MGSSPPKKTTLQRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVI 60

Query: 59  FGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGR 118
           F   +LGP GHF H  LDK FKGKKDT TVAKKV+LEQLT SP N+L+FMIYYGVV+E  
Sbjct: 61  FAGGFLGPAGHFFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERT 120

Query: 119 PWRDVKTKIKKDYPTVQYTSWT 140
           PW  V+ +IKK YPTVQ T+WT
Sbjct: 121 PWTLVRERIKKTYPTVQLTAWT 142

May be involved in the metabolism of reactive oxygen species.
Arabidopsis thaliana (taxid: 3702)

>sp|Q54GD8|PX24C_DICDI PXMP2/4 family protein 3 OS=Dictyostelium discoideum GN=DDB_G0290223 PE=3 SV=1

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 83/140 (59%), Gaps = 9/140 (6%)

Query: 12  YLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIQKLQLRRLLLKVLFGCAYLGPFGHFL 71
           Y+ +L+  P++TKA+T+  LS IS +VAQK    +K+    ++   ++G     P  H+ 
Sbjct: 17  YMKKLKSKPIQTKALTSATLSFISSVVAQKFIEKKKINWNAVVKFTVWGLIS-SPLVHYW 75

Query: 72  HLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGV--VVEGRPWRDVKTKIKK 129
           H+ILD++FK  KD      K++++QL  +P+ N+ F   Y V  +++G+P + +  K+  
Sbjct: 76  HIILDRLFKNIKDKYQSWGKLIVDQLVFAPFINIAF---YSVLAILDGKP-KSILFKLYF 131

Query: 130 D-YPTVQYTSWTVLLLSLIV 148
           D +PT++  SW V  L+ ++
Sbjct: 132 DLFPTLK-ASWKVWPLAQLI 150

Dictyostelium discoideum (taxid: 44689)

>sp|Q54FR4|PX24D_DICDI PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 69/136 (50%), Gaps = 6/136 (4%)

Query: 10  QQYLIQLQQHPLRTKAITAGVLSAISDIVAQKL----TGIQKLQLRRLLLKVLFGCAYLG 65
             YL QL ++P+ TKA+T+G L  ISD + Q +       +K   +R +   +FG A  G
Sbjct: 13  SHYLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFGFAVTG 72

Query: 66  PFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKT 125
           P  H+    LDK F  KK       K+ ++Q+  SP  N +F    G ++EG+   D+  
Sbjct: 73  PLFHYWFKYLDKHFP-KKSYRHAFIKLTIDQVVCSPVFNFLFFSGMG-ILEGKSKDDIVE 130

Query: 126 KIKKDYPTVQYTSWTV 141
           K+KKD+ T   +   V
Sbjct: 131 KLKKDWLTTYVSDCVV 146

Dictyostelium discoideum (taxid: 44689)

>sp|Q2KIY1|PXMP2_BOVIN Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3

 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 80/149 (53%), Gaps = 11/149 (7%)

Query: 1   MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQ-------KLTGIQKLQLRRL 53
           +G + ++ L QYL  L+ +P+ TKA T+G+LSA+ + +AQ       K    QKL +   
Sbjct: 14  LGPLPRRALSQYLRLLRLYPVLTKAATSGILSALGNFLAQLIEKKQKKENCSQKLDVSGP 73

Query: 54  LLKVLFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSP-WNNLMFMIYYG 112
           L   ++G  + GP GHF +L++++    +   + + K+++L++L  +P + +L F++   
Sbjct: 74  LRYAIYGFFFTGPLGHFFYLLMERWIPSEVPLAGI-KRLLLDRLLFAPAFLSLFFLVMN- 131

Query: 113 VVVEGRPWRDVKTKIKKDYPTVQYTSWTV 141
             +EG+       K+K  +      +W V
Sbjct: 132 -FLEGQDTAAFAAKMKSGFWPALRMNWRV 159

Seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the peroxisomal membrane.

Bos taurus (taxid: 9913)

>sp|Q5BK62|MPV17_RAT Protein Mpv17 OS=Rattus norvegicus GN=Mpv17 PE=2 SV=1

 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 5/133 (3%)

Query: 10  QQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLT---GIQKLQLRRLLLKVLFGCAYLGP 66
           + Y   L  HP + + +TAG L  + DI++Q+L    G+Q+ Q  R L     GC ++GP
Sbjct: 5   RAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQQHQTGRTLTMASLGCGFVGP 64

Query: 67  FGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTK 126
                + +LD +  G    + + KK++L+Q   +P     F+   G V+ G   +D   K
Sbjct: 65  VVGGWYRVLDHLIPGTTKVNAL-KKMLLDQGGFAPCFLGCFLPLVG-VLNGMSAQDNWAK 122

Query: 127 IKKDYPTVQYTSW 139
           +K+DYP    T++
Sbjct: 123 LKRDYPDALITNY 135

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Rattus norvegicus (taxid: 10116)

>sp|P19258|MPV17_MOUSE Protein Mpv17 OS=Mus musculus GN=Mpv17 PE=2 SV=1

 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 5/133 (3%)

Query: 10  QQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLT---GIQKLQLRRLLLKVLFGCAYLGP 66
           + Y   L  HP + + +TAG L  + D+++Q+L    G+Q+ Q  R L  V  GC ++GP
Sbjct: 5   RAYQRALAAHPWKVQVLTAGSLMGVGDMISQQLVERRGLQQHQAGRTLTMVSLGCGFVGP 64

Query: 67  FGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTK 126
                + +LD +  G      + KK++L+Q   +P     F+   G ++ G   +D   K
Sbjct: 65  VVGGWYKVLDHLIPGTTKVHAL-KKMLLDQGGFAPCFLGCFLPLVG-ILNGMSAQDNWAK 122

Query: 127 IKKDYPTVQYTSW 139
           +K+DYP    T++
Sbjct: 123 LKRDYPDALITNY 135

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Mus musculus (taxid: 10090)

>sp|Q07066|PXMP2_RAT Peroxisomal membrane protein 2 OS=Rattus norvegicus GN=Pxmp2 PE=1 SV=2

 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 84/148 (56%), Gaps = 10/148 (6%)

Query: 3   SIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIQK-----LQLRRLLLKV 57
           S+ K+ L QYL+ L+ +P+ TKA+++G+LSA+ +++AQ +   QK     L++  LL  +
Sbjct: 16  SLPKRALAQYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLRYL 75

Query: 58  LFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEG 117
           ++G    GP  H+L+L ++     +   + V K+++L++L  +P   L+   +   ++EG
Sbjct: 76  VYGLFVTGPLSHYLYLFMEYWVPPEVPWARV-KRLLLDRLFFAP-TFLLLFFFVMNLLEG 133

Query: 118 RPWRDVKTKIKKDY-PTVQ--YTSWTVL 142
           +       K++  + P +Q  +  WT L
Sbjct: 134 KNISVFVAKMRSGFWPALQMNWRMWTPL 161

Seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the peroxisomal membrane.

Rattus norvegicus (taxid: 10116)

>sp|P39210|MPV17_HUMAN Protein Mpv17 OS=Homo sapiens GN=MPV17 PE=1 SV=1

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 5/133 (3%)

Query: 10  QQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLT---GIQKLQLRRLLLKVLFGCAYLGP 66
           + Y   L  HP + + +TAG L  + DI++Q+L    G+Q+ Q  R L  V  GC ++GP
Sbjct: 5   RAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQEHQRGRTLTMVSLGCGFVGP 64

Query: 67  FGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTK 126
                + +LD+   G      + KK++L+Q   +P     F+   G  + G   +D   K
Sbjct: 65  VVGGWYKVLDRFIPGTTKVDAL-KKMLLDQGGFAPCFLGCFLPLVG-ALNGLSAQDNWAK 122

Query: 127 IKKDYPTVQYTSW 139
           +++DYP    T++
Sbjct: 123 LQRDYPDALITNY 135

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Homo sapiens (taxid: 9606)

>sp|Q2KIN6|MPV17_BOVIN Protein Mpv17 OS=Bos taurus GN=MPV17 PE=2 SV=1

 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 5/133 (3%)

Query: 10  QQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLT---GIQKLQLRRLLLKVLFGCAYLGP 66
           + Y   L  HP + + +TAG L  + D+++Q+L    G+Q  Q  R L     GC ++GP
Sbjct: 5   RAYQRALTAHPWKVQVLTAGSLMGLGDVISQQLVERRGLQAHQAGRTLTMASLGCGFVGP 64

Query: 67  FGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTK 126
                + +LD++  G      + KK++L+Q   +P     F+   G  + G   +D   K
Sbjct: 65  VVGGWYRVLDRLIPGTTKVDAL-KKMLLDQGGFAPCFLGCFLPLVG-TLNGLSAQDNWAK 122

Query: 127 IKKDYPTVQYTSW 139
           +++D+P    T++
Sbjct: 123 LQRDFPDALITNY 135

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Bos taurus (taxid: 9913)

>sp|Q9NR77|PXMP2_HUMAN Peroxisomal membrane protein 2 OS=Homo sapiens GN=PXMP2 PE=1 SV=3

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 6/82 (7%)

Query: 1  MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIQKLQLRR------LL 54
          +G++ ++ L QYL+ L+ +P+ TKA T+G+LSA+ + +AQ +   +K +  R       L
Sbjct: 14 LGALPRRALAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPL 73

Query: 55 LKVLFGCAYLGPFGHFLHLILD 76
             ++G  + GP  HF +  ++
Sbjct: 74 RYAVYGFFFTGPLSHFFYFFME 95

Seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the peroxisomal membrane.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	150
351723819	185	uncharacterized protein LOC100499909 [Gl	0.94	0.762	0.808	3e-63
356532038	185	PREDICTED: peroxisomal membrane protein	0.94	0.762	0.794	1e-61
255637621	185	unknown [Glycine max]	0.94	0.762	0.780	5e-60
224113703	185	predicted protein [Populus trichocarpa]	0.933	0.756	0.785	5e-56
449523477	185	PREDICTED: peroxisomal membrane protein	0.926	0.751	0.676	1e-52
449433976	185	PREDICTED: peroxisomal membrane protein	0.926	0.751	0.676	1e-52
449458842	183	PREDICTED: peroxisomal membrane protein	0.926	0.759	0.697	3e-52
255554829	185	peroxisomal membrane protein 2, pxmp2, p	0.933	0.756	0.828	4e-51
449520295	183	PREDICTED: LOW QUALITY PROTEIN: peroxiso	0.926	0.759	0.683	5e-51
297800820	185	predicted protein [Arabidopsis lyrata su	0.926	0.751	0.669	2e-50

>gi|351723819|ref|NP_001237804.1| uncharacterized protein LOC100499909 [Glycine max] gi|255627583|gb|ACU14136.1| unknown [Glycine max]

 Score =  245 bits (626), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 114/141 (80%), Positives = 131/141 (92%)

Query: 1   MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIQKLQLRRLLLKVLFG 60
           MGS+AKKGL  Y+ QLQQHPLRTK ITAGVLSAISD+V+QKLTGIQKLQL+RLL KV+FG
Sbjct: 1   MGSLAKKGLNNYVKQLQQHPLRTKVITAGVLSAISDVVSQKLTGIQKLQLKRLLFKVIFG 60

Query: 61  CAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPW 120
            AYLGPFGHF HLILDKIFKGK+D+ TVAKKV++EQLTS+PWNNL+FMIYYG+VVEG+PW
Sbjct: 61  AAYLGPFGHFFHLILDKIFKGKRDSKTVAKKVLIEQLTSNPWNNLLFMIYYGLVVEGQPW 120

Query: 121 RDVKTKIKKDYPTVQYTSWTV 141
            +VK K+KKDYP+VQYTSWTV
Sbjct: 121 VNVKAKVKKDYPSVQYTSWTV 141

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532038|ref|XP_003534581.1| PREDICTED: peroxisomal membrane protein PMP22-like [Glycine max]

 Score =  240 bits (613), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 112/141 (79%), Positives = 130/141 (92%)

Query: 1   MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIQKLQLRRLLLKVLFG 60
           MGS+AKKGL  Y+ QLQQHPLRTK ITAGVLSAISD+V+QKLTGIQK+QL+RLL KV+FG
Sbjct: 1   MGSLAKKGLNNYVKQLQQHPLRTKVITAGVLSAISDVVSQKLTGIQKIQLKRLLFKVIFG 60

Query: 61  CAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPW 120
            AYLGPFGHF HLILDKIFKGK+D+ TVAKKV++EQLTS+PWNNL+FMIYYG+VVEG+PW
Sbjct: 61  AAYLGPFGHFFHLILDKIFKGKRDSKTVAKKVLIEQLTSNPWNNLLFMIYYGLVVEGQPW 120

Query: 121 RDVKTKIKKDYPTVQYTSWTV 141
            +VK K+KKDY +VQYTSWTV
Sbjct: 121 VNVKAKVKKDYLSVQYTSWTV 141

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637621|gb|ACU19135.1| unknown [Glycine max]

 Score =  235 bits (599), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 110/141 (78%), Positives = 128/141 (90%)

Query: 1   MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIQKLQLRRLLLKVLFG 60
           MGS+AKKGL  Y+ QLQQHPLRTK ITAGVLSAISD+V+QKLTGIQK+QL+RLL KV+FG
Sbjct: 1   MGSLAKKGLNNYVKQLQQHPLRTKVITAGVLSAISDVVSQKLTGIQKIQLKRLLFKVIFG 60

Query: 61  CAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPW 120
            AY GPFGH  HLILDKIFKGK+D+ TVAKKV++EQLTS+PWNNL+FMIYYG+VVEG+PW
Sbjct: 61  AAYPGPFGHLFHLILDKIFKGKRDSKTVAKKVLIEQLTSNPWNNLLFMIYYGLVVEGQPW 120

Query: 121 RDVKTKIKKDYPTVQYTSWTV 141
            +VK K+KKDY +VQYTSWTV
Sbjct: 121 VNVKAKVKKDYLSVQYTSWTV 141

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113703|ref|XP_002316547.1| predicted protein [Populus trichocarpa] gi|222859612|gb|EEE97159.1| predicted protein [Populus trichocarpa]

 Score =  222 bits (565), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 110/140 (78%), Positives = 134/140 (95%)

Query: 1   MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIQKLQLRRLLLKVLFG 60
           MGS+AKKGLQQY++QLQQHPLRTKAITAGVLSA+SDIV+QKL+GIQKLQ++R+LLKVLFG
Sbjct: 1   MGSVAKKGLQQYMLQLQQHPLRTKAITAGVLSALSDIVSQKLSGIQKLQIKRILLKVLFG 60

Query: 61  CAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPW 120
             YLGPFGH+LH++LDK+FKGKKDT+TVAKKV +EQLT+SPWNNL+FM+YYG+V++GRPW
Sbjct: 61  FGYLGPFGHYLHILLDKLFKGKKDTTTVAKKVAVEQLTASPWNNLVFMVYYGMVIDGRPW 120

Query: 121 RDVKTKIKKDYPTVQYTSWT 140
             VKTK+KK+YP VQ+TSWT
Sbjct: 121 LQVKTKLKKEYPAVQFTSWT 140

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449523477|ref|XP_004168750.1| PREDICTED: peroxisomal membrane protein PMP22-like [Cucumis sativus]

 Score =  211 bits (536), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 94/139 (67%), Positives = 119/139 (85%)

Query: 1   MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIQKLQLRRLLLKVLFG 60
           MGS+AKK L +YL QL  HPLRTK IT+GVL A+SD+ +QKLTGIQKLQL+R+LLKVL+G
Sbjct: 1   MGSLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYG 60

Query: 61  CAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPW 120
           C YLGPF H+LH ILDKIF GK+DT TVAKKV LEQLT+SPWN+ +F++YYG+++EGR W
Sbjct: 61  CLYLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTW 120

Query: 121 RDVKTKIKKDYPTVQYTSW 139
             VK K+KK++P++Q T+W
Sbjct: 121 VQVKAKVKKEFPSLQLTAW 139

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433976|ref|XP_004134772.1| PREDICTED: peroxisomal membrane protein PMP22-like [Cucumis sativus]

 Score =  211 bits (536), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 94/139 (67%), Positives = 119/139 (85%)

Query: 1   MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIQKLQLRRLLLKVLFG 60
           MGS+AKK L +YL QL  HPLRTK IT+GVL A+SD+ +QKLTGIQKLQL+R+LLKVL+G
Sbjct: 1   MGSLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYG 60

Query: 61  CAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPW 120
           C YLGPF H+LH ILDKIF GK+DT TVAKKV LEQLT+SPWN+ +F++YYG+++EGR W
Sbjct: 61  CLYLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTW 120

Query: 121 RDVKTKIKKDYPTVQYTSW 139
             VK K+KK++P++Q T+W
Sbjct: 121 VQVKAKVKKEFPSLQLTAW 139

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449458842|ref|XP_004147155.1| PREDICTED: peroxisomal membrane protein PMP22-like [Cucumis sativus]

 Score =  209 bits (532), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 97/139 (69%), Positives = 119/139 (85%)

Query: 1   MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIQKLQLRRLLLKVLFG 60
           M SI  +  Q YL+QLQ++PLRTKAITAGVL+ ISD VAQK++GI+KLQ RRLLL +L+G
Sbjct: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  CAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPW 120
            AY GPFGHFLH ++D+IFKGKK  +TVAKKV+LEQ+TSSPWNNL FM+YYG+VVEGRPW
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPW 120

Query: 121 RDVKTKIKKDYPTVQYTSW 139
             VK K++KDYPT+Q T+W
Sbjct: 121 SLVKAKVRKDYPTIQLTAW 139

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255554829|ref|XP_002518452.1| peroxisomal membrane protein 2, pxmp2, putative [Ricinus communis] gi|223542297|gb|EEF43839.1| peroxisomal membrane protein 2, pxmp2, putative [Ricinus communis]

 Score =  205 bits (522), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 116/140 (82%), Positives = 129/140 (92%)

Query: 1   MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIQKLQLRRLLLKVLFG 60
           MGS+AKKGLQ YL+QLQ HPLRTKAITAG LSA+SDI+AQK++GIQKLQLRRLLLKVLFG
Sbjct: 1   MGSVAKKGLQLYLLQLQHHPLRTKAITAGFLSAVSDIIAQKISGIQKLQLRRLLLKVLFG 60

Query: 61  CAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPW 120
            AYLGPFGHFLH+ILDKIFKGKKDT TVAKKVV+EQLTSSPWNN++FMIYYGV+VE RPW
Sbjct: 61  SAYLGPFGHFLHIILDKIFKGKKDTKTVAKKVVVEQLTSSPWNNMLFMIYYGVIVERRPW 120

Query: 121 RDVKTKIKKDYPTVQYTSWT 140
             VK +IKK+YP VQ TSWT
Sbjct: 121 MHVKARIKKEYPKVQLTSWT 140

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449520295|ref|XP_004167169.1| PREDICTED: LOW QUALITY PROTEIN: peroxisomal membrane protein PMP22-like [Cucumis sativus]

 Score =  205 bits (521), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 95/139 (68%), Positives = 118/139 (84%)

Query: 1   MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIQKLQLRRLLLKVLFG 60
           M SI  +  Q YL+QLQ++PLRTKAITAGVL+ ISD VAQK++GI+KLQ RRLLL +L+G
Sbjct: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  CAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPW 120
            AY GPFGHFLH ++D+IFKGKK  +TVAKKV+LEQ+TSSPWN  +FM+YYG+VVEGRPW
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNXFIFMMYYGLVVEGRPW 120

Query: 121 RDVKTKIKKDYPTVQYTSW 139
             VK K++KDYPT+Q T+W
Sbjct: 121 SLVKAKVRKDYPTIQLTAW 139

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297800820|ref|XP_002868294.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297314130|gb|EFH44553.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  203 bits (517), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 93/139 (66%), Positives = 115/139 (82%)

Query: 1   MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIQKLQLRRLLLKVLFG 60
           M  +AK   ++YLIQLQ HPLRTKAITAGVL+  SD +AQK++G++++Q RRLLL +L+G
Sbjct: 1   MSDLAKDAWRKYLIQLQAHPLRTKAITAGVLTGCSDAIAQKISGVKRIQFRRLLLLMLYG 60

Query: 61  CAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPW 120
            AY GPFGHF H ++D IFKGKK  STVAKKV+LEQLTSSPWNN +FM YYG+VVEGRPW
Sbjct: 61  FAYGGPFGHFFHKLMDTIFKGKKGNSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPW 120

Query: 121 RDVKTKIKKDYPTVQYTSW 139
           + VK K+ KDYPT+Q T+W
Sbjct: 121 KLVKQKVGKDYPTIQLTAW 139

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	150
TAIR|locus:1009023385	185	AT4G14305 "AT4G14305" [Arabido	0.926	0.751	0.625	1.5e-44
TAIR|locus:2137124	190	PMP22 [Arabidopsis thaliana (t	0.933	0.736	0.640	5.7e-43
DICTYBASE|DDB_G0290223	184	DDB_G0290223 "pmp22 family pro	0.873	0.711	0.314	5.6e-13
ASPGD|ASPL0000063859	252	AN7258 [Emericella nidulans (t	0.92	0.547	0.302	1.5e-12
TAIR|locus:2091767	235	AT3G24570 "AT3G24570" [Arabido	0.58	0.370	0.333	1.8e-11
DICTYBASE|DDB_G0290631	185	DDB_G0290631 "pmp22 family pro	0.866	0.702	0.328	5.8e-11
TAIR|locus:2167816	254	AT5G43140 "AT5G43140" [Arabido	0.833	0.492	0.292	6.2e-11
UNIPROTKB|G4N5Q6	279	MGG_05292 "Integral membrane p	0.886	0.476	0.268	7.4e-11
MGI|MGI:107487	194	Pxmp2 "peroxisomal membrane pr	0.933	0.721	0.26	3.2e-10
ZFIN|ZDB-GENE-040912-184	194	zgc:92599 "zgc:92599" [Danio r	0.913	0.706	0.256	4.1e-10

TAIR|locus:1009023385 AT4G14305 "AT4G14305" [Arabidopsis thaliana (taxid:3702)]

 Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
 Identities = 87/139 (62%), Positives = 106/139 (76%)

Query:     1 MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIXXXXXXXXXXXVLFG 60
             M  +AK   ++YLIQLQ HPLRTKAITAGVL+  SD +AQK++G+           +L+G
Sbjct:     1 MSDLAKDAWRKYLIQLQAHPLRTKAITAGVLAGCSDAIAQKISGVKRIQFRRLLLLMLYG 60

Query:    61 CAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPW 120
              AY GPFGHF H ++D IFKGKK  STVAKKV+LEQLTSSPWNN +FM YYG+VVEGRPW
Sbjct:    61 FAYGGPFGHFFHKLMDTIFKGKKGNSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPW 120

Query:   121 RDVKTKIKKDYPTVQYTSW 139
             + VK K+ KDYPT+Q T+W
Sbjct:   121 KLVKHKLGKDYPTIQLTAW 139

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2137124 PMP22 [Arabidopsis thaliana (taxid:3702)]

 Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
 Identities = 91/142 (64%), Positives = 105/142 (73%)

Query:     1 MGSIAKKG--LQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIXXXXXXXXXXXVL 58
             MGS   K   LQ+YL QLQQHPLRTKAITAGVLS +SD+V+QKL+GI           V+
Sbjct:     1 MGSSPPKKTTLQRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVI 60

Query:    59 FGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGR 118
             F   +LGP GHF H  LDK FKGKKDT TVAKKV+LEQLT SP N+L+FMIYYGVV+E  
Sbjct:    61 FAGGFLGPAGHFFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERT 120

Query:   119 PWRDVKTKIKKDYPTVQYTSWT 140
             PW  V+ +IKK YPTVQ T+WT
Sbjct:   121 PWTLVRERIKKTYPTVQLTAWT 142

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IDA

DICTYBASE|DDB_G0290223 DDB_G0290223 "pmp22 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 44/140 (31%), Positives = 78/140 (55%)

Query:    12 YLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIXXXXXXXXXXXVLFGCAYLGPFGHFL 71
             Y+ +L+  P++TKA+T+  LS IS +VAQK                ++G     P  H+ 
Sbjct:    17 YMKKLKSKPIQTKALTSATLSFISSVVAQKFIEKKKINWNAVVKFTVWGLIS-SPLVHYW 75

Query:    72 HLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGV--VVEGRPWRDVKTKIKK 129
             H+ILD++FK  KD      K++++QL  +P+ N+ F   Y V  +++G+P + +  K+  
Sbjct:    76 HIILDRLFKNIKDKYQSWGKLIVDQLVFAPFINIAF---YSVLAILDGKP-KSILFKLYF 131

Query:   130 D-YPTVQYTSWTVLLLSLIV 148
             D +PT++  SW V  L+ ++
Sbjct:   132 DLFPTLK-ASWKVWPLAQLI 150

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

ASPGD|ASPL0000063859 AN7258 [Emericella nidulans (taxid:162425)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 43/142 (30%), Positives = 64/142 (45%)

Query:     9 LQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIXXXXXXXXXXXV----LFGCAYL 64
             L  YL QLQ +PLRTK +T+GVLS+  + +A  L              V    L+G    
Sbjct:    48 LALYLRQLQSNPLRTKMLTSGVLSSAQEFLASYLANDVSKHGHYFSSRVPKMLLYGMFIS 107

Query:    65 GPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVK 124
              P GH L  IL K+F G+        +++   L  SP  N++++    ++   R    V+
Sbjct:   108 APLGHVLVGILQKVFAGRTSLKAKVLQILASNLIVSPIQNVVYLTCMAIIAGARTLHQVR 167

Query:   125 TKIKKDYPTVQYTSWTVLLLSL 146
               IK  +  V   SW    L+L
Sbjct:   168 ATIKAGFFPVMKVSWITSPLAL 189

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2091767 AT3G24570 "AT3G24570" [Arabidopsis thaliana (taxid:3702)]

 Score = 116 (45.9 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
 Identities = 32/96 (33%), Positives = 50/96 (52%)

Query:    58 LFGCAYLGPFGHFLHLILDKIFKGK-----KDTSTVAKKVVLEQLTSSPWNNLMFMIYYG 112
             +FG  ++GP GHF +  LDK  K K     K T  VA KV ++ L   P + L+F  Y G
Sbjct:    85 MFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFVAAKVAMDGLIFGPVDLLVFFTYMG 144

Query:   113 VVVEGRPWRDVKTKIKKDY-PTVQYT--SWTVLLLS 145
                 G+   +VK  +K+D+ P +     +W +L ++
Sbjct:   145 FAT-GKNTAEVKEGLKRDFLPALALEGGAWPLLQIA 179

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

DICTYBASE|DDB_G0290631 DDB_G0290631 "pmp22 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 45/137 (32%), Positives = 65/137 (47%)

Query:     6 KKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLT----GIXXXXXXXXXXXVLFGC 61
             K     YL QL ++P+ TKA+T+G L  ISD + Q +                   +FG 
Sbjct:     9 KLAQSHYLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFGF 68

Query:    62 AYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWR 121
             A  GP  H+    LDK F  KK       K+ ++Q+  SP  N +F    G++ EG+   
Sbjct:    69 AVTGPLFHYWFKYLDKHFP-KKSYRHAFIKLTIDQVVCSPVFNFLFFSGMGIL-EGKSKD 126

Query:   122 DVKTKIKKDYPTVQYTS 138
             D+  K+KKD+ T  Y S
Sbjct:   127 DIVEKLKKDWLTT-YVS 142

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2167816 AT5G43140 "AT5G43140" [Arabidopsis thaliana (taxid:3702)]

 Score = 153 (58.9 bits), Expect = 6.2e-11, P = 6.2e-11
 Identities = 38/130 (29%), Positives = 64/130 (49%)

Query:     9 LQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLT--GIXXXXXXXXXXXVLFGCAYLGP 66
             L+ YL +L+ HP  TK+IT  V+   +D+ +Q +T                 FG  +LGP
Sbjct:    79 LRWYLRKLESHPFMTKSITTSVIYMAADLTSQMITMEPTGSFDLIRTARMASFGLIFLGP 138

Query:    67 FGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTK 126
               H     L KI   K+D  T  KK+++ Q+   P +N +F  Y    ++G    ++  +
Sbjct:   139 SQHLWFSYLSKILP-KRDVLTTFKKIMMGQVLFGPVSNTVFYSY-NAALQGENSEEIVAR 196

Query:   127 IKKDY-PTVQ 135
             +K+D  PT++
Sbjct:   197 LKRDLLPTLK 206

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|G4N5Q6 MGG_05292 "Integral membrane protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 154 (59.3 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 37/138 (26%), Positives = 62/138 (44%)

Query:     7 KG-LQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIXXXXXXXXXXXV----LFGC 61
             KG L  Y+ QL+ +PLRTK +TAG LS   +++A  L              V     +G 
Sbjct:    63 KGYLAAYIKQLEDNPLRTKMLTAGTLSGAQELIASFLAKDRNKHGNYFTSRVPKMAAYGA 122

Query:    62 AYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWR 121
                 P GHFL  +L K FK +        ++++  L  +P  N +++    ++   R + 
Sbjct:   123 LVSAPMGHFLIWLLQKAFKNRTSLRAKIMQIIVSNLIIAPIQNSVYLTAMALIAGARTYH 182

Query:   122 DVKTKIKKDYPTVQYTSW 139
              V+  ++  +  V   SW
Sbjct:   183 QVRATVRVGFWRVMKVSW 200

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

MGI|MGI:107487 Pxmp2 "peroxisomal membrane protein 2" [Mus musculus (taxid:10090)]

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 39/150 (26%), Positives = 80/150 (53%)

Query:     1 MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLT-----GIXXXXXXXXXX 55
             +GS+ K+ L QYL+ L+ +P+ TKA+++G+LSA+ +++AQ +                  
Sbjct:    14 LGSLPKRALAQYLLLLKLYPVLTKAVSSGILSALGNLLAQTIEKKQRKDSRLLEVSGLLR 73

Query:    56 XVLFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVV 115
              +++G    GP  H+L+L ++     +   ++V K+++L++L  +P   L+F     ++ 
Sbjct:    74 YLVYGLFVTGPLSHYLYLFMEYSVPPEVPWASV-KRLLLDRLFFAPTFLLLFFFVMNLL- 131

Query:   116 EGRPWRDVKTKIKKDY-PTVQ--YTSWTVL 142
             EG+       K++  + P +Q  +  WT L
Sbjct:   132 EGKNVSVFVAKMRSGFWPALQMNWRMWTPL 161

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=IDA

GO:0005777 "peroxisome" evidence=ISO

GO:0005778 "peroxisomal membrane" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0043234 "protein complex" evidence=ISO

ZFIN|ZDB-GENE-040912-184 zgc:92599 "zgc:92599" [Danio rerio (taxid:7955)]

 Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 38/148 (25%), Positives = 75/148 (50%)

Query:     3 SIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLT---GIXXXXXXXXXXXV-- 57
             S+  + LQQYL  L+++P+ TK++T+G+LSA+ ++++Q L     +           +  
Sbjct:    12 SLLARALQQYLSLLKKYPIITKSVTSGILSALGNLLSQVLEYQKNVKENSPKKKISILGP 71

Query:    58 ----LFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGV 113
                 ++G    GP  H+ + +L+ +         + K+++LE+L  +P   L+F +    
Sbjct:    72 VHFAIYGLFITGPVSHYFYHLLEVLLPTTVPYCLI-KRLLLERLIFAPAFLLLFYVVMNA 130

Query:   114 VVEGRPWRDVKTKIKKDYPTVQYTSWTV 141
             + EG+   DV+ K+K  Y      +W V
Sbjct:   131 L-EGKTLADVQNKLKTSYWPAMKMNWKV 157

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_XI1336 hypothetical protein (185 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	150
KOG1944	222	consensus Peroxisomal membrane protein MPV17 and r	100.0
PF04117	68	Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR0	99.2

>KOG1944 consensus Peroxisomal membrane protein MPV17 and related proteins [General function prediction only]

Probab=100.00  E-value=7.8e-33  Score=211.95  Aligned_cols=133  Identities=35%  Similarity=0.551  Sum_probs=126.1

Q ss_pred             HhhCchhHHHHHHHHHH-HHHHHHHHhHhcC-----CchhhHHHHHHHHHhhhhhchhhhHHHHHHHhhcCCCCchHHHH
Q 031930           16 LQQHPLRTKAITAGVLS-AISDIVAQKLTGI-----QKLQLRRLLLKVLFGCAYLGPFGHFLHLILDKIFKGKKDTSTVA   89 (150)
Q Consensus        16 l~~~Pl~t~~~ts~~l~-~~gD~~aQ~~~~~-----~~~D~~R~~~~~~~G~~~~gP~~h~wy~~L~~~~~~~~~~~~~~   89 (150)
                      ...+|+++++++++.+. .+||+++|.++.+     +.+|+.|++||+++|+++.||..|+||+.||+.+|. ++..+++
T Consensus        46 ~~~~~~l~~~i~~~~~~~~~~d~~~q~~~~~~~~~~~~~d~~rtlr~~~~G~~f~gp~~~~Wy~~L~~~~p~-~~~~~~~  124 (222)
T KOG1944|consen   46 FSLYPLLTKAITTSLLLAAAGDVISQSLEGRSKKLFQTLDLTRTLRMGIFGFLFVGPTLHYWYRLLSKLFPK-KTLITVV  124 (222)
T ss_pred             hhhhhHHHHHHHHHHHHHHhchhhhhhhhhhcccccccccHHHHHHHHhhhhheeccchhHHHHHHHHHccC-ccHHHHH
Confidence            46789999999998888 9999999999742     578999999999999999999999999999999999 7999999


Q ss_pred             HHHHHhhhccchHHHHHHHHHHHHHhcCCChHHHHHHHHhcCHHHHhhCcccchhhhhhcC
Q 031930           90 KKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTVLLLSLIVFW  150 (150)
Q Consensus        90 ~Kv~~Dq~v~~P~~~~~f~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~vWp~~q~i~~  150 (150)
                      +|++.||++++|+.+.+|+..++ ++||++.+++.++++++++|++++||++||++|+|||
T Consensus       125 ~kvl~dql~~~P~~~~~ff~~~~-~legk~~~~~~~~~~~~~~p~l~~~~~~WP~~q~inF  184 (222)
T KOG1944|consen  125 KKVLLDQLVFAPLFIVVFFLLMG-LLEGKTNEEAKAKLKRKFWPTLKANWMVWPLVQFINF  184 (222)
T ss_pred             HHHHHhhhhhchHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHhhhheecchhheeee
Confidence            99999999999999999999999 9999999999999999999999999999999999996

>PF04117 Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR007248 The 22 kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes

Probab=99.20  E-value=4.3e-12  Score=80.22  Aligned_cols=39  Identities=33%  Similarity=0.700  Sum_probs=37.2

Q ss_pred             HHHHhcCCChHHHHHHHHhcCHHHHhhCcccchhhhhhcC
Q 031930          111 YGVVVEGRPWRDVKTKIKKDYPTVQYTSWTVLLLSLIVFW  150 (150)
Q Consensus       111 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~vWp~~q~i~~  150 (150)
                      |+ ++||+|++++++++|++++++++++|++|||+|++||
T Consensus         1 Mg-~l~g~s~~~~~~~l~~~~~~~~~~~~~~Wp~~~~vnF   39 (68)
T PF04117_consen    1 MG-LLEGKSWEEIKEKLKRDYWPTLKASWKFWPPAQIVNF   39 (68)
T ss_pred             CC-cccCCCHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHh
Confidence            46 8999999999999999999999999999999999986

PMP22 seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information []. Mpv17 is a closely related peroxisomal protein involved in the development of early-onset glomerulosclerosis []. A member of this family found in Saccharomyces cerevisiae (Baker's yeast) is an integral membrane protein of the inner mitochondrial membrane and has been suggested to play a role in mitochondrial function during heat shock [].; GO: 0016021 integral to membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00