Citrus Sinensis ID: 032148

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140------
Protein Sequence
MANAIALLSCNTVVLAAQQRPQRRAKKLKKPNTKQNNKNSTSTSSSVGFGIEKMEPLWRCVQGCGACCKLDKGPDFATPEEIFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYPERPYFCRVEPAVFLSLYGINKKKFNKEACK
Secondary Structure (PSIPRED)
cccccccccccEEEEccccccHHHHHHccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccHHHHHHHHHHHccccEEEEEccccccEEccccccccccccHHHHHHHHcccHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccHEEccccccEEEEcccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccHHHHHcccHHHHHHHHHHccccccEEEEcccccEEEEccccccEEEccHHHHHHHccccHHHHHHHHcc
Coil and Loop (DISEMBL)
MANAIALLSCNTVVLAAQQRPQRRakklkkpntkqnnknststsssvgfgiekmeplwrcvqgcgacckldkgpdfatpeeifddpsdvELYRsligpdgwcinyekstrkcsiyperpyfcrvepaVFLSLYGINKKKFNKEACK
Flexible Loop (DISEMBL)
manaiallscntvvlaaqqrpqrrakklkkpntkqnnknststsssvgfGIEKMEPLWRCVQGCGACCKLDKGPDFATPEEIFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYPERPYFCRVEPAVFLSlyginkkkfnkeack
Low Complexity Region (SEG)
MANAIALLSCNTVVLAAQQRPQRRAkklkkpntkqnnknststsssVGFGIEKMEPLWRCVQGCGACCKLDKGPDFATPEEIFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYPERPYFCRVEPAVFLSLYGINKKKFNKEACK
Disordered region (IsUnstruct)
****IALLSCNTVVLA*******************************GFGIEKMEPLWRCVQGCGACCKLDKGPDFATPEEIFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYPERPYFCRVEPAVFLSLYGINK*********
Disordered Region (DISOPRED)
*********C***********************************************WRCVQGCGACCKLDKGPDFATPEEIFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYPERPYFCRVEPAVFLSLYGINKKKFNKEACK
Disordered Region (DISEMBL)
MANAIALLSCNTVVLAAQQ***************************VGFGIEKMEPLWRCVQGCGACCKLDKGPDFATPEEIFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYPERPYFCRVEPAVFLSLYGINKKKFNKEACK
Disordered Region (DISPRO)
*ANAIALLSCNTVVLAAQ**********************************KMEPLWRCVQGCGACCKLDKGPDFATPEEIFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYPERPYFCRVEPAVFLSLYGINKKKFNKEACK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MANAIALLSCNTVVLAAQQRPQRRAKKLKKPNTKQNNKNSTSTSSSVGFGIEKMEPLWRCVQGCGACCKLDKGPDFATPEEIFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYPERPYFCRVEPAVFLSLYGINKKKFNKEACK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
224088603	168	predicted protein [Populus trichocarpa]	0.945	0.821	0.664	4e-49
225439815	184	PREDICTED: uncharacterized protein LOC10	0.760	0.603	0.711	1e-44
255568492	175	conserved hypothetical protein [Ricinus	0.691	0.577	0.782	3e-43
356548184	165	PREDICTED: uncharacterized protein LOC10	0.910	0.806	0.598	9e-43
297806201	177	hypothetical protein ARALYDRAFT_487044 [	0.952	0.785	0.602	9e-41
21553724	174	unknown [Arabidopsis thaliana]	0.965	0.810	0.569	4e-39
15241920	176	uncharacterized protein [Arabidopsis tha	0.965	0.801	0.569	4e-39
449502625	156	PREDICTED: uncharacterized LOC101220204,	0.856	0.801	0.586	2e-37
449448683	162	PREDICTED: uncharacterized protein LOC10	0.684	0.617	0.7	3e-37
148907146	169	unknown [Picea sitchensis]	0.917	0.792	0.555	1e-35

>gi|224088603|ref|XP_002308492.1| predicted protein [Populus trichocarpa] gi|222854468|gb|EEE92015.1| predicted protein [Populus trichocarpa]

 Score =  199 bits (505), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 97/146 (66%), Positives = 114/146 (78%), Gaps = 8/146 (5%)

Query: 1   MANAIALLSCNTVVLAAQQRPQR-RAKKLKKPNTKQNNKNSTSTSSSVGFGIEKMEPLWR 59
           M+ AI+L   N+V+ AA++ PQ+ + K  K P        +T   S+ GFG  K EPLWR
Sbjct: 1   MSPAISLPCFNSVIFAARRSPQKGKLKNAKVPG-------ATPKLSNTGFGTSKKEPLWR 53

Query: 60  CVQGCGACCKLDKGPDFATPEEIFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYPERP 119
           CV+GCGACCKL KGP FATPEEIF +PSD+ELY+SLIGPDGWCI+YEKSTRKCSIYP+RP
Sbjct: 54  CVEGCGACCKLAKGPAFATPEEIFTNPSDIELYKSLIGPDGWCIHYEKSTRKCSIYPDRP 113

Query: 120 YFCRVEPAVFLSLYGINKKKFNKEAC 145
           YFCRVEP +F SLYGI KKKFNKEAC
Sbjct: 114 YFCRVEPDIFESLYGITKKKFNKEAC 139

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439815|ref|XP_002274142.1| PREDICTED: uncharacterized protein LOC100243090 [Vitis vinifera] gi|297741516|emb|CBI32648.3| unnamed protein product [Vitis vinifera]

 Score =  184 bits (467), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 79/111 (71%), Positives = 94/111 (84%)

Query: 35  QNNKNSTSTSSSVGFGIEKMEPLWRCVQGCGACCKLDKGPDFATPEEIFDDPSDVELYRS 94
           Q  +  +  S  +GFG ++ +P W+C+QGCGACCKLDKGP FATPEEIFDDPSDV+LYRS
Sbjct: 43  QTKQRQSRGSDGIGFGGKRNDPTWQCIQGCGACCKLDKGPSFATPEEIFDDPSDVKLYRS 102

Query: 95  LIGPDGWCINYEKSTRKCSIYPERPYFCRVEPAVFLSLYGINKKKFNKEAC 145
           ++GPDGWCI+YEKSTR CSIY +RPYFCRVEP VF +LYGI KK+FNKEAC
Sbjct: 103 MVGPDGWCIHYEKSTRTCSIYSDRPYFCRVEPNVFQTLYGIGKKRFNKEAC 153

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568492|ref|XP_002525220.1| conserved hypothetical protein [Ricinus communis] gi|223535517|gb|EEF37186.1| conserved hypothetical protein [Ricinus communis]

 Score =  179 bits (454), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 79/101 (78%), Positives = 89/101 (88%)

Query: 45  SSVGFGIEKMEPLWRCVQGCGACCKLDKGPDFATPEEIFDDPSDVELYRSLIGPDGWCIN 104
           S+ GFG ++ E LWRCV+GCGACCKLDKGP FATPEEIF DP D+ELYRSL+GPDGWC++
Sbjct: 46  SATGFGAKRPEQLWRCVEGCGACCKLDKGPSFATPEEIFTDPCDIELYRSLVGPDGWCVH 105

Query: 105 YEKSTRKCSIYPERPYFCRVEPAVFLSLYGINKKKFNKEAC 145
           Y+KSTRKCSIY ERPYFCRVE  VFL LYGI +KKFNKEAC
Sbjct: 106 YDKSTRKCSIYSERPYFCRVEAPVFLKLYGIPQKKFNKEAC 146

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548184|ref|XP_003542483.1| PREDICTED: uncharacterized protein LOC100818260 [Glycine max]

 Score =  177 bits (450), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 88/147 (59%), Positives = 106/147 (72%), Gaps = 14/147 (9%)

Query: 1   MANAIALLS--CNTVVLAAQQRPQRRAKKLKKPNTKQNNKNSTSTSSSVGFGIEKMEPLW 58
           M+ A+  LS   +  V +A +RP  R   + K   KQ          S+GFG +K E  W
Sbjct: 1   MSPALTTLSPPLSLSVTSAARRP--RLTAMVKTEKKQ----------SLGFGSDKKETKW 48

Query: 59  RCVQGCGACCKLDKGPDFATPEEIFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYPER 118
            CV+GCG+CCKL KGP F +PEEIFDDPSDV+LY+SLIGPDGWCI+YEKSTRKCSIYPER
Sbjct: 49  HCVEGCGSCCKLQKGPSFPSPEEIFDDPSDVQLYKSLIGPDGWCIHYEKSTRKCSIYPER 108

Query: 119 PYFCRVEPAVFLSLYGINKKKFNKEAC 145
           PYFCRVEP VF SL+G+ +K F+KEAC
Sbjct: 109 PYFCRVEPEVFKSLFGVKEKNFHKEAC 135

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806201|ref|XP_002870984.1| hypothetical protein ARALYDRAFT_487044 [Arabidopsis lyrata subsp. lyrata] gi|297316821|gb|EFH47243.1| hypothetical protein ARALYDRAFT_487044 [Arabidopsis lyrata subsp. lyrata]

 Score =  171 bits (433), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 85/141 (60%), Positives = 102/141 (72%), Gaps = 2/141 (1%)

Query: 4   AIALLSCNTVVLAAQQRPQRRAKKLKKPNTKQNNKNSTSTSSSVGFGIEKMEPLWRCVQG 63
           A++    +T +++A +R Q    K KK   K  NK  T+TS+S   G    E  W+CV+G
Sbjct: 6   ALSTAPMSTTIISATRRSQVSQPKAKK--VKPENKRPTTTSTSGFSGRTTKELTWKCVEG 63

Query: 64  CGACCKLDKGPDFATPEEIFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYPERPYFCR 123
           CGACCK+ K   FATP+EIFD+P DVELYRS+IG DGWCINY KSTRKCSIY +RPYFCR
Sbjct: 64  CGACCKIAKDFAFATPDEIFDNPDDVELYRSMIGDDGWCINYNKSTRKCSIYSDRPYFCR 123

Query: 124 VEPAVFLSLYGINKKKFNKEA 144
           VEP VF SLYGI +KKFNKEA
Sbjct: 124 VEPEVFKSLYGIEEKKFNKEA 144

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21553724|gb|AAM62817.1| unknown [Arabidopsis thaliana]

 Score =  166 bits (419), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 82/144 (56%), Positives = 103/144 (71%), Gaps = 3/144 (2%)

Query: 1   MANAIALLSCNTVVLAAQQRPQRRAKKLKKPNTKQNNKNSTSTSSSVGFGIEKMEPLWRC 60
           M+ A++    +  +++A +R Q    K KK   K  NK  T ++S    G  K E  W+C
Sbjct: 1   MSLALSTAPMSRTIISATRRSQVSQPKAKK--VKPANKRPTMSTSGFSGGTTK-ELTWKC 57

Query: 61  VQGCGACCKLDKGPDFATPEEIFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYPERPY 120
           V+GCGACCK+ K   FATP+EIFD+P DVELYRS+IG DGWC+NY+K+TRKCSIY +RPY
Sbjct: 58  VEGCGACCKIAKDFSFATPDEIFDNPDDVELYRSMIGDDGWCLNYDKATRKCSIYADRPY 117

Query: 121 FCRVEPAVFLSLYGINKKKFNKEA 144
           FCRVEP VF SLYGI +KKFNKEA
Sbjct: 118 FCRVEPEVFKSLYGIEEKKFNKEA 141

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15241920|ref|NP_195891.1| uncharacterized protein [Arabidopsis thaliana] gi|7413546|emb|CAB86025.1| putative protein [Arabidopsis thaliana] gi|15450946|gb|AAK96744.1| putative protein [Arabidopsis thaliana] gi|30102908|gb|AAP21372.1| At5g02710 [Arabidopsis thaliana] gi|62318528|dbj|BAD94876.1| hypothetical protein [Arabidopsis thaliana] gi|332003125|gb|AED90508.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  166 bits (419), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 82/144 (56%), Positives = 103/144 (71%), Gaps = 3/144 (2%)

Query: 1   MANAIALLSCNTVVLAAQQRPQRRAKKLKKPNTKQNNKNSTSTSSSVGFGIEKMEPLWRC 60
           M+ A++    +  +++A +R Q    K KK   K  NK  T ++S    G  K E  W+C
Sbjct: 3   MSLALSTAPMSRTIISATRRSQVSQPKAKK--VKPANKRPTMSTSGFSGGTTK-ELTWKC 59

Query: 61  VQGCGACCKLDKGPDFATPEEIFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYPERPY 120
           V+GCGACCK+ K   FATP+EIFD+P DVELYRS+IG DGWC+NY+K+TRKCSIY +RPY
Sbjct: 60  VEGCGACCKIAKDFSFATPDEIFDNPDDVELYRSMIGDDGWCLNYDKATRKCSIYADRPY 119

Query: 121 FCRVEPAVFLSLYGINKKKFNKEA 144
           FCRVEP VF SLYGI +KKFNKEA
Sbjct: 120 FCRVEPEVFKSLYGIEEKKFNKEA 143

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449502625|ref|XP_004161697.1| PREDICTED: uncharacterized LOC101220204, partial [Cucumis sativus]

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/133 (58%), Positives = 94/133 (70%), Gaps = 8/133 (6%)

Query: 13  VVLAAQQRPQRRAKKLKKPNTKQNNKNSTSTSSSVGFGIEKMEPLWRCVQGCGACCKLDK 72
           V + A  RPQ+   K  K    +N         +VGFG ++ E LW+C++GCGACCKL K
Sbjct: 4   VTVTAAHRPQKTKTKDYKTTQGRN--------INVGFGGKRKEELWQCIEGCGACCKLAK 55

Query: 73  GPDFATPEEIFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYPERPYFCRVEPAVFLSL 132
           GP FA PEEIF + SD+ELY+SLIG DGWCI+YEK+TRKCSIY +RPYFCRVE  VF  L
Sbjct: 56  GPSFAAPEEIFQNTSDIELYKSLIGVDGWCIHYEKTTRKCSIYADRPYFCRVESPVFEKL 115

Query: 133 YGINKKKFNKEAC 145
           YGI + KFNK AC
Sbjct: 116 YGIKENKFNKAAC 128

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448683|ref|XP_004142095.1| PREDICTED: uncharacterized protein LOC101220204 [Cucumis sativus]

 Score =  159 bits (402), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 83/100 (83%)

Query: 46  SVGFGIEKMEPLWRCVQGCGACCKLDKGPDFATPEEIFDDPSDVELYRSLIGPDGWCINY 105
           +VGFG ++ E LW+C++GCGACCKL KGP FA PEEIF + SD+ELY+SLIG DGWCI+Y
Sbjct: 35  NVGFGGKRKEELWQCIEGCGACCKLAKGPSFAAPEEIFQNTSDIELYKSLIGVDGWCIHY 94

Query: 106 EKSTRKCSIYPERPYFCRVEPAVFLSLYGINKKKFNKEAC 145
           EK+TRKCSIY +RPYFCRVE  VF  LYGI + KFNK AC
Sbjct: 95  EKTTRKCSIYADRPYFCRVESPVFEKLYGIKENKFNKAAC 134

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148907146|gb|ABR16716.1| unknown [Picea sitchensis]

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 75/135 (55%), Positives = 89/135 (65%), Gaps = 1/135 (0%)

Query: 11  NTVVLAAQQRPQRRAKKLKKPNTKQNNKNSTSTSSSVGFGIEKMEPLWRCVQGCGACCKL 70
           NT V+   Q  +     L     K+   N T   +  GF  ++ E  W CV GCGACCKL
Sbjct: 5   NTTVIDRPQSHESGIPVLAMAKMKKKQLN-TKLKNGKGFETKQEEVTWACVSGCGACCKL 63

Query: 71  DKGPDFATPEEIFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYPERPYFCRVEPAVFL 130
            KGP FA PE+IFDDP D+ LY SLIG DGWC+NY+K TR CSIY ERPYFCRV+P VF 
Sbjct: 64  AKGPSFAPPEDIFDDPDDIALYWSLIGSDGWCVNYDKVTRTCSIYNERPYFCRVKPDVFK 123

Query: 131 SLYGINKKKFNKEAC 145
            LYGI++ +FNKEAC
Sbjct: 124 KLYGIDENRFNKEAC 138

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
TAIR|locus:2151321	176	AT5G02710 "AT5G02710" [Arabido	0.664	0.551	0.714	6.3e-37
UNIPROTKB|Q4K6A0	102	PFL_5154 "Uncharacterized prot	0.458	0.656	0.361	2.1e-06
UNIPROTKB|Q481K2	96	CPS_2552 "Putative uncharacter	0.404	0.614	0.348	0.00013
TIGR_CMR|CPS_2552	96	CPS_2552 "conserved hypothetic	0.404	0.614	0.348	0.00013
UNIPROTKB|Q5HVR5	124	CJE0604 "Putative uncharacteri	0.294	0.346	0.391	0.00014
TIGR_CMR|CJE_0604	124	CJE_0604 "conserved hypothetic	0.294	0.346	0.391	0.00014
UNIPROTKB|Q4K3T5	117	PFL_6040 "Uncharacterized prot	0.431	0.538	0.304	0.00027
UNIPROTKB|Q888B6	74	PSPTO_1114 "Uncharacterized pr	0.321	0.635	0.38	0.00057

TAIR|locus:2151321 AT5G02710 "AT5G02710" [Arabidopsis thaliana (taxid:3702)]

 Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
 Identities = 70/98 (71%), Positives = 81/98 (82%)

Query:    48 GF-GIEKMEPLWRCVQGCGACCKLDKGPDFATPEEIFDDPSDVELYRSLIGPDGWCINYE 106
             GF G    E  W+CV+GCGACCK+ K   FATP+EIFD+P DVELYRS+IG DGWC+NY+
Sbjct:    46 GFSGGTTKELTWKCVEGCGACCKIAKDFSFATPDEIFDNPDDVELYRSMIGDDGWCLNYD 105

Query:   107 KSTRKCSIYPERPYFCRVEPAVFLSLYGINKKKFNKEA 144
             K+TRKCSIY +RPYFCRVEP VF SLYGI +KKFNKEA
Sbjct:   106 KATRKCSIYADRPYFCRVEPEVFKSLYGIEEKKFNKEA 143

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

UNIPROTKB|Q4K6A0 PFL_5154 "Uncharacterized protein" [Pseudomonas protegens Pf-5 (taxid:220664)]

 Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 26/72 (36%), Positives = 33/72 (45%)

Query:    55 EPLWRCVQGCGACCKLDKG--PDFATPEEIFD-DPSDVELYRSLIGPDGWCINYEKSTRK 111
             EP   C      CC+L+     D   PE   D D    E+ R L   DGWC   ++ + +
Sbjct:    12 EPAVSCSTCAACCCQLEVMLITDTGVPERFIDTDDWGGEVMRRL--DDGWCAALDRDSMR 69

Query:   112 CSIYPERPYFCR 123
             CSIY  RP  CR
Sbjct:    70 CSIYELRPLICR 81

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q481K2 CPS_2552 "Putative uncharacterized protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 23/66 (34%), Positives = 31/66 (46%)

Query:    62 QGCGACCKLDKG--PDFATPEE-IFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYPER 118
             Q C  CC L+     D   P+  ++ D    E    L   DGWC   ++ T  CSIY  R
Sbjct:    19 QAC--CCSLEVMLLTDTGVPDRHVYVDEYGKETM--LRFDDGWCSALDRDTLMCSIYENR 74

Query:   119 PYFCRV 124
             P+ CR+
Sbjct:    75 PWVCRI 80

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CPS_2552 CPS_2552 "conserved hypothetical protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 23/66 (34%), Positives = 31/66 (46%)

Query:    62 QGCGACCKLDKG--PDFATPEE-IFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYPER 118
             Q C  CC L+     D   P+  ++ D    E    L   DGWC   ++ T  CSIY  R
Sbjct:    19 QAC--CCSLEVMLLTDTGVPDRHVYVDEYGKETM--LRFDDGWCSALDRDTLMCSIYENR 74

Query:   119 PYFCRV 124
             P+ CR+
Sbjct:    75 PWVCRI 80

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5HVR5 CJE0604 "Putative uncharacterized protein" [Campylobacter jejuni RM1221 (taxid:195099)]

 Score = 77 (32.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 18/46 (39%), Positives = 25/46 (54%)

Query:    99 DGW-CINYEKSTRKCSIYPERPYFCRVEPAVFLSLYGINKKKFNKE 143
             DG+ CI ++   R CSIY  RP  CR  P  F   +  ++K+  KE
Sbjct:    73 DGFACIFFDTQKRNCSIYDFRPKQCRTFP--FWEYFKTHQKELEKE 116

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CJE_0604 CJE_0604 "conserved hypothetical protein" [Campylobacter jejuni RM1221 (taxid:195099)]

 Score = 77 (32.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 18/46 (39%), Positives = 25/46 (54%)

Query:    99 DGW-CINYEKSTRKCSIYPERPYFCRVEPAVFLSLYGINKKKFNKE 143
             DG+ CI ++   R CSIY  RP  CR  P  F   +  ++K+  KE
Sbjct:    73 DGFACIFFDTQKRNCSIYDFRPKQCRTFP--FWEYFKTHQKELEKE 116

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q4K3T5 PFL_6040 "Uncharacterized protein" [Pseudomonas protegens Pf-5 (taxid:220664)]

 Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
 Identities = 21/69 (30%), Positives = 31/69 (44%)

Query:    56 PLWRCVQGCGACCKLDKGPDFATPEEIFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIY 115
             P + CV GC  CC    GP   +PEE+   P      +     +  C++       C++Y
Sbjct:    16 PSFECVPGCHDCC----GPVTTSPEEMSRLPRKTAAEQEAAMDELNCVHL--GPNGCTVY 69

Query:   116 PERPYFCRV 124
              ERP  CR+
Sbjct:    70 DERPLICRL 78

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q888B6 PSPTO_1114 "Uncharacterized protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)]

 Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
 Identities = 19/50 (38%), Positives = 25/50 (50%)

Query:    75 DFATPEEIFD-DPSDVELYRSLIGPDGWCINYEKSTRKCSIYPERPYFCR 123
             D   PE   D D    E+   L   DGWC   +++T  C+IY +RP  CR
Sbjct:     6 DTGVPERYIDTDEWGGEVMLRL--DDGWCAALDRNTMMCTIYEKRPLICR 53


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.140   0.460    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      146       125   0.00091  102 3  11 22  0.50    30
                                                     29  0.39    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  580 (62 KB)
  Total size of DFA:  144 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.04u 0.11s 12.15t   Elapsed:  00:00:01
  Total cpu time:  12.04u 0.11s 12.15t   Elapsed:  00:00:01
  Start:  Fri May 10 17:34:34 2013   End:  Fri May 10 17:34:35 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_Genewise1_v1.C_LG_VI2546	hypothetical protein (168 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pg.C_LG_XI0474	hypothetical protein (304 aa)	•		•						0.599
	gw1.XIII.355.1	hypothetical protein (158 aa)			•	•					0.521
	eugene3.00160848	hypothetical protein (215 aa)			•	•					0.520
	estExt_fgenesh4_pg.C_LG_VI0671	hypothetical protein (792 aa)	•								0.468
	gw1.II.3234.1	annotation not avaliable (153 aa)			•						0.460
	gw1.III.2351.1	annotation not avaliable (82 aa)			•						0.435
	gw1.XII.287.1	hypothetical protein (117 aa)			•	•					0.429
	estExt_Genewise1_v1.C_LG_X6026	hypothetical protein (200 aa)			•	•					0.429
	gw1.X.3026.1	hypothetical protein (245 aa)			•	•					0.427
	estExt_Genewise1_v1.C_LG_I8587	hypothetical protein (226 aa)			•						0.427

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	146
pfam03692	85	pfam03692, FliB, Flagellin N-methylase	1e-10
COG0727	132	COG0727, COG0727, Predicted Fe-S-cluster oxidoredu	4e-10

>gnl|CDD|217675 pfam03692, FliB, Flagellin N-methylase

 Score = 54.2 bits (130), Expect = 1e-10
 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 9/80 (11%)

Query: 63  GCGACCKLDKGP------DFATPEEIFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYP 116
           GCGACCK           +   P  + ++  D+E Y  +   DG C+  ++ T  CSIY 
Sbjct: 4   GCGACCKALGIKLTDEDTERLAPTGVAEEDEDLEEYVKV---DGRCVFLDEETCLCSIYE 60

Query: 117 ERPYFCRVEPAVFLSLYGIN 136
           ERP  CR+ P   +  +G  
Sbjct: 61  ERPLCCRLFPFSNIEEFGWL 80

This family of proteins contains 8 conserved cysteines. It is one of the complex of proteins of the flagellar Fli complex. FliB is a lysine-N-methylase that is required for post-translational methylation of lysine residues in the flagellin. It is found in a wide range of different Proteobacteria including E coli and various Salmonella spp. Length = 85

>gnl|CDD|223799 COG0727, COG0727, Predicted Fe-S-cluster oxidoreductase [General function prediction only]

 Score = 53.9 bits (129), Expect = 4e-10
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 10/87 (11%)

Query: 53  KMEPLWRCVQGCGACCKL----------DKGPDFATPEEIFDDPSDVELYRSLIGPDGWC 102
           K + ++ C +GCGACC            D+G     P +    P  +      +  +G C
Sbjct: 5   KFKFIFFCCEGCGACCCAIEVSLPEPGFDRGELKGYPADTEALPKYLRCKLLDVDINGRC 64

Query: 103 INYEKSTRKCSIYPERPYFCRVEPAVF 129
           +  +  T+ C IY  RP  CR  P V 
Sbjct: 65  VFLDGETKLCRIYEIRPLACRTFPFVE 91

Length = 132

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	146
PF03692	85	CxxCxxCC: Putative zinc- or iron-chelating domain;	99.63
COG0727	132	Predicted Fe-S-cluster oxidoreductase [General fun	99.43
PRK05170	147	hypothetical protein; Provisional	97.33
COG2983	153	Uncharacterized conserved protein [Function unknow	94.3
PF11307	183	DUF3109: Protein of unknown function (DUF3109); In	92.97

>PF03692 CxxCxxCC: Putative zinc- or iron-chelating domain; InterPro: IPR005358 This family of proteins contain 8 conserved cysteines that may form a zinc binding site

Probab=99.63  E-value=1.7e-16  Score=108.95  Aligned_cols=67  Identities=34%  Similarity=0.640  Sum_probs=51.3

Q ss_pred             cchhhhhHhcCCCCCCCcCCHHHhhhChHHHHH-----hhhhcCCCCccccccCCCCCCcccCCCCcccccchhh
Q 032148           59 RCVQGCGACCKLDKGPDFATPEEIFDDPSDVEL-----YRSLIGPDGWCINYEKSTRKCSIYPERPYFCRVEPAV  128 (146)
Q Consensus        59 ~C~~gCG~CC~~~~~~v~lt~~Ei~~i~~~l~~-----y~~l~~~dg~CpFLd~~~~~CsIYe~RP~~CR~yPf~  128 (146)
                      .|. +||.||+..  .+.++..|+.++......     .......+++|+||++++++|+||++||++||.||+.
T Consensus         1 ~C~-~Cg~CC~~~--~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~C~fL~~~~~~C~Iy~~RP~~CR~~p~~   72 (85)
T PF03692_consen    1 KCR-QCGACCRGY--RVPLTPEEIERIAEHLGIEEEFFLERYAREDGPCPFLDEDNGRCSIYEVRPLICRTYPFW   72 (85)
T ss_pred             Ccc-cHhHHHcCC--CcCCCHHHHHHHHHHhcCchhhhHHHhhccCCCCcCcCCCCCccCCcCccCHhHeeCccc
Confidence            484 799999943  367899999877654331     1112237889999997667999999999999999987

The function of these proteins is unknown.

>COG0727 Predicted Fe-S-cluster oxidoreductase [General function prediction only]

Probab=99.43  E-value=1.9e-14  Score=106.70  Aligned_cols=79  Identities=27%  Similarity=0.436  Sum_probs=52.0

Q ss_pred             cCCCCCcchhhhhHhcCCCCCCCcCCHHHhhhCh--------HHHHHhh----hhcCCCCccccccCCCCCCcccCCCCc
Q 032148           53 KMEPLWRCVQGCGACCKLDKGPDFATPEEIFDDP--------SDVELYR----SLIGPDGWCINYEKSTRKCSIYPERPY  120 (146)
Q Consensus        53 ~~~~~f~C~~gCG~CC~~~~~~v~lt~~Ei~~i~--------~~l~~y~----~l~~~dg~CpFLd~~~~~CsIYe~RP~  120 (146)
                      .+...+.| .+||+||......+  ...++.++.        ..+..+.    .....+++|+||+.+++.|+||++||.
T Consensus         6 ~~~~~~~c-~~Cg~cC~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~fl~~~~~~C~Iy~~RP~   82 (132)
T COG0727           6 FKFIFFCC-EGCGACCCAIEVSL--PEPGFDRGELKGYPADTEALPKYLRCKLLDVDINGRCVFLDGETKLCRIYEIRPL   82 (132)
T ss_pred             hhhhhhhH-HHhhHHhcCCCCCc--chhhhhHHHhcCCCccceeecccceeeeecccCCCCCEEecCCCCceeecCcCch
Confidence            44566789 69999999765432  333332221        0011121    222445699999987778999999999


Q ss_pred             ccccchhhhHHhhC
Q 032148          121 FCRVEPAVFLSLYG  134 (146)
Q Consensus       121 ~CR~yPf~~~~~~g  134 (146)
                      +||+|||++....+
T Consensus        83 ~Cr~~P~~~~~~~~   96 (132)
T COG0727          83 ACRTFPFVEERGTG   96 (132)
T ss_pred             hheecceEEeccce
Confidence            99999997766544

>PRK05170 hypothetical protein; Provisional

Probab=97.33  E-value=5.6e-05  Score=58.84  Aligned_cols=46  Identities=28%  Similarity=0.540  Sum_probs=32.4

Q ss_pred             cchhhhhHhcCCCCCCCcCCHHHhhhChHHHHHhhhhcCCCCccccccCCCCCCcccCCCCc
Q 032148           59 RCVQGCGACCKLDKGPDFATPEEIFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYPERPY  120 (146)
Q Consensus        59 ~C~~gCG~CC~~~~~~v~lt~~Ei~~i~~~l~~y~~l~~~dg~CpFLd~~~~~CsIYe~RP~  120 (146)
                      .| .|||.||-+.-     ..+|-          ..+.-.+..|.+||.++.+|++|+.|=.
T Consensus        23 LC-DgCG~CCl~Kl-----eDedt----------gei~~T~vaC~lLD~~T~~C~~Y~~R~~   68 (147)
T PRK05170         23 LC-DGCGKCCLHKL-----EDEDT----------GEIYYTNVACRLLDIKTCQCSDYENRFE   68 (147)
T ss_pred             Hh-hhhhHHhceee-----eccCC----------CcEEEcceecccccCCCCCCCChhhhcc
Confidence            49 69999998531     22221          1122356789999988999999999954

>COG2983 Uncharacterized conserved protein [Function unknown]

Probab=94.30  E-value=0.013  Score=45.72  Aligned_cols=20  Identities=25%  Similarity=0.373  Sum_probs=17.6

Q ss_pred             ccccccCCCCCCcccCCCCc
Q 032148          101 WCINYEKSTRKCSIYPERPY  120 (146)
Q Consensus       101 ~CpFLd~~~~~CsIYe~RP~  120 (146)
                      .|..||.++.+|+.|+.|=.
T Consensus        54 aC~lLd~etcrC~~Y~~Rf~   73 (153)
T COG2983          54 ACELLDPETCRCKDYENRFK   73 (153)
T ss_pred             eeeecCccccccccHHhhhc
Confidence            59999999999999998843

>PF11307 DUF3109: Protein of unknown function (DUF3109); InterPro: IPR021458 This bacterial family of proteins has no known function

Probab=92.97  E-value=0.04  Score=44.44  Aligned_cols=78  Identities=23%  Similarity=0.345  Sum_probs=47.7

Q ss_pred             CCCCCcc-hhhh-hHhcCCCCCCCcCCHHHhhhChHHHH---Hhhh-------------hcC----------CCCccccc
Q 032148           54 MEPLWRC-VQGC-GACCKLDKGPDFATPEEIFDDPSDVE---LYRS-------------LIG----------PDGWCINY  105 (146)
Q Consensus        54 ~~~~f~C-~~gC-G~CC~~~~~~v~lt~~Ei~~i~~~l~---~y~~-------------l~~----------~dg~CpFL  105 (146)
                      ....|.| ...| |.||-.-..--+|+.+|+..+.+.+.   .|++             ..+          .++.|+|.
T Consensus        14 ~~~~F~CdL~~CkG~CCvEGd~GAPl~~~E~~~le~~~~~v~~~L~~~~~~~I~~qG~~~~d~~Gd~~T~~v~g~eCvf~   93 (183)
T PF11307_consen   14 LEEKFVCDLSACKGACCVEGDAGAPLEEEEIAILEEIYPKVKPYLSPEGIAAIERQGVAYEDEDGDLVTPIVNGKECVFT   93 (183)
T ss_pred             HhhcccCchhcCCCCCccCCCcCCCCCHHHHHHHHHHhHHHhhhcCHHHHHHHHHcCceEEecCCCEEeeeEcCCeeEEE
Confidence            3466777 2368 99998544345678888865543222   2210             001          23479998


Q ss_pred             cC-CC--CCCcccC---------CCCcccccchhhhHH
Q 032148          106 EK-ST--RKCSIYP---------ERPYFCRVEPAVFLS  131 (146)
Q Consensus       106 d~-~~--~~CsIYe---------~RP~~CR~yPf~~~~  131 (146)
                      .- ++  ..|.|-.         .+|..|++||-...+
T Consensus        94 ~~~e~G~~~CaiE~Ay~~G~~~~~KPISChLYPIRv~~  131 (183)
T PF11307_consen   94 CYDENGICLCAIEKAYREGKIDFKKPISCHLYPIRVKK  131 (183)
T ss_pred             EEccCCEEEEHHHHHHHcCCCCCCCCceEeecceEEEe
Confidence            53 33  3687765         799999999954443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00