Citrus Sinensis ID: 032229

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-----
Protein Sequence
MEQDYYNRSKSYGPGMMRNHNHMEITGYYDPPPPRAPAAASYDLRCYSASYAQSQMSNFDNNFNYNVKDFNTKKGKITSGSSSSSKSWSLADPEFQRKKRVASYKMYSVEGKVKGSFRKSVRWLKDRSDLGICFLKSTYLQSAVS
Secondary Structure (PSIPRED)
ccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcEEEEEEEEccccHHHcccccEEcccccEEEEEHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccEEccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHEEEEEEEccEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
meqdyynrsksygpgmmrnhnhmeitgyydpppprapaaasydlrcYSASyaqsqmsnfdnnfnynvkdfntkkgkitsgssssskswsladpefqrkkRVASYKMYSVEGKVKGSFRKSVRWlkdrsdlgicflkstylqsavs
Flexible Loop (DISEMBL)
MEQDYYNRSKSYGPGMMRNHNHMEITGYYDPPPPRAPAAASYDLRCYSASYAQSQMSNFDNNFNYNVKDFNTKKgkitsgssssskswsladpefqrkkrvasykmysvegkvkgsfrksvrwlkdrsdlgicflkstylqsavs
Low Complexity Region (SEG)
MEQDYYNRSKSYGPGMMRNHNHMEITGYYDpppprapaaaSYDLRCYSASYAQSQMSNFDNNFNYNVKDFNtkkgkitsgssssskswsLADPEFQRKKRVASYKMYSVEGKVKGSFRKSVRWLKDRSDLGICFLKSTYLQSAVS
Disordered region (IsUnstruct)
*****************************************YDLRCYSASYA*****NFDNNFNYNVK**********************************SYKMYSVEGKVKGSFRKSVRWLKDRSDLGICFLKSTYL*****
Disordered Region (DISOPRED)
******N**************************************************************************************EFQRKKRVASYKMYSVEGKVKGSFRKSVRWLKDRSDLGICFLKSTYLQS***
Disordered Region (DISEMBL)
********SKSYGPGMMRNHNHMEITGYYDPPPPRAPAAASYDLRCYSASYAQSQMSNFDNNFNYNVKDFNTKKG******************EFQRKKRVASYKMYSVEGKVKGSFRKSVRWLKDRSDLGICFLKSTYLQSAVS
Disordered Region (DISPRO)
******NRSKSYGPGMMRNHNHMEITGYYDPP******AASYDLRCYSASYAQSQMSN*****************************WSLADPEFQRKKRVASYKMYSVEGKVKGSFRKSVRWLKDRSDLGICFLKSTYLQS***
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEQDYYNRSKSYGPGMMRNHNHMEITGYYDPPPPRAPAAASYDLRCYSASYAQSQMSNFDNNFNYNVKDFNTKKGKITSGSSSSSKSWSLADPEFQRKKRVASYKMYSVEGKVKGSFRKSVRWLKDRSDLGICFLKSTYLQSAVS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	145
255550081	130	conserved hypothetical protein [Ricinus	0.703	0.784	0.695	2e-26
356552376	127	PREDICTED: uncharacterized protein LOC10	0.779	0.889	0.606	2e-24
351721565	115	uncharacterized protein LOC100305934 [Gl	0.724	0.913	0.542	2e-23
351723617	115	uncharacterized protein LOC100527044 [Gl	0.724	0.913	0.534	2e-22
255546143	124	conserved hypothetical protein [Ricinus	0.675	0.790	0.555	4e-22
388517509	123	unknown [Medicago truncatula]	0.758	0.894	0.536	3e-20
388511571	121	unknown [Lotus japonicus]	0.744	0.892	0.512	5e-20
224088800	130	predicted protein [Populus trichocarpa]	0.8	0.892	0.564	5e-20
351725801	116	uncharacterized protein LOC100306567 [Gl	0.668	0.836	0.503	8e-20
388499238	123	unknown [Medicago truncatula]	0.758	0.894	0.528	1e-19

>gi|255550081|ref|XP_002516091.1| conserved hypothetical protein [Ricinus communis] gi|223544577|gb|EEF46093.1| conserved hypothetical protein [Ricinus communis]

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/105 (69%), Positives = 80/105 (76%), Gaps = 3/105 (2%)

Query: 23  MEITGYYDPPPPRAPAAASYDLRCYSASYAQSQMSNFDNNFNYNVKDFNTKKGKITSGSS 82
           M+I  Y+ P  P  PA  SY+LR YSASYAQSQM+N  NNF  N +DF  K GK  +  S
Sbjct: 20  MQIESYHGPQIPPPPATTSYELRSYSASYAQSQMAN--NNFTTNTRDFKLKTGK-NASGS 76

Query: 83  SSSKSWSLADPEFQRKKRVASYKMYSVEGKVKGSFRKSVRWLKDR 127
           SSSKSWS  DPEFQRKKRVASYKMYSVEGKVKGSFR+S RWLKDR
Sbjct: 77  SSSKSWSFTDPEFQRKKRVASYKMYSVEGKVKGSFRRSFRWLKDR 121

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552376|ref|XP_003544544.1| PREDICTED: uncharacterized protein LOC100780149 [Glycine max]

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/132 (60%), Positives = 89/132 (67%), Gaps = 19/132 (14%)

Query: 1   MEQDYYNRSKSYGPGMMRNHNHMEITGYYD--PPPPRAPAAASYDLRCYSASYAQSQMSN 58
           ME   YNRS+S+G G M     M++  YY    PPPR P     DLR YS SYAQ+QM  
Sbjct: 1   MEDFNYNRSRSHGNGQM-----MKMERYYGGATPPPR-PC----DLRSYSVSYAQAQMGP 50

Query: 59  FDNNFNYNVKDFNT-KKGK-ITSGSSSSSKSWSLA-DPEFQRKKRVASYKMYSVEGKVKG 115
                NYN KD    KKGK ++S ++S SKSWS A DPE QRKKRVASYKMYSVEGKVKG
Sbjct: 51  N----NYNNKDLKMMKKGKSMSSRATSISKSWSFATDPEIQRKKRVASYKMYSVEGKVKG 106

Query: 116 SFRKSVRWLKDR 127
           SFRKS RWLKDR
Sbjct: 107 SFRKSFRWLKDR 118

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721565|ref|NP_001235166.1| uncharacterized protein LOC100305934 [Glycine max] gi|255627025|gb|ACU13857.1| unknown [Glycine max]

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/129 (54%), Positives = 81/129 (62%), Gaps = 24/129 (18%)

Query: 1   MEQDYYNRSKSYGPGMMRNHNHMEITGYYDPPPPRAPAAASYDL--RCYSASYAQSQMSN 58
           ME+  + RS+SY  G M     M+I  YY  P P       YDL  R YSASYAQ+ M  
Sbjct: 1   MEE--FQRSRSYANGQM-----MQIESYYGAPRP-------YDLSLRTYSASYAQTHMGP 46

Query: 59  FDNNFNYNVKDFNTKKGKITSGSSSSSKSWSLADPEFQRKKRVASYKMYSVEGKVKGSFR 118
                    +D   KKGK  S  SS SKSWSLADPE +RKKR+ASYKMYSVEGK+KGSFR
Sbjct: 47  --------NRDLKLKKGKSISAGSSFSKSWSLADPEIRRKKRIASYKMYSVEGKIKGSFR 98

Query: 119 KSVRWLKDR 127
           KS RWLK++
Sbjct: 99  KSFRWLKNK 107

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723617|ref|NP_001237797.1| uncharacterized protein LOC100527044 [Glycine max] gi|255631432|gb|ACU16083.1| unknown [Glycine max]

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/129 (53%), Positives = 80/129 (62%), Gaps = 24/129 (18%)

Query: 1   MEQDYYNRSKSYGPGMMRNHNHMEITGYYDPPPPRAPAAASYDL--RCYSASYAQSQMSN 58
           ME+  + RS+SY  G M     M+I  YY  P P       YDL  R YSASYAQ+Q+  
Sbjct: 1   MEE--FQRSRSYANGQM-----MQIESYYGAPRP-------YDLSLRTYSASYAQTQIGP 46

Query: 59  FDNNFNYNVKDFNTKKGKITSGSSSSSKSWSLADPEFQRKKRVASYKMYSVEGKVKGSFR 118
                    +D   KKGK  S  SS SKSWS ADPE +RKKRVASYKMYSVEGK+KGSF 
Sbjct: 47  --------PRDLKLKKGKSISAGSSFSKSWSFADPELRRKKRVASYKMYSVEGKIKGSFM 98

Query: 119 KSVRWLKDR 127
           KS RWLK++
Sbjct: 99  KSFRWLKNK 107

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546143|ref|XP_002514131.1| conserved hypothetical protein [Ricinus communis] gi|223546587|gb|EEF48085.1| conserved hypothetical protein [Ricinus communis]

 Score =  109 bits (273), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/117 (55%), Positives = 75/117 (64%), Gaps = 19/117 (16%)

Query: 19  NHNHMEITGYYDPPPPRAPAAAS--YDLRCYSASYA------QSQMSNFDNNFNYNVKDF 70
           N   M+I  Y+ P   R+ +  +   DLRCYSASYA      Q+QM N D  F       
Sbjct: 10  NDGRMQIQSYHGPSSLRSSSGVNSMQDLRCYSASYASSVHPTQTQMGNNDVKF------- 62

Query: 71  NTKKGKITSGSSSSSKSWSLADPEFQRKKRVASYKMYSVEGKVKGSFRKSVRWLKDR 127
             KKGK T+GS S  KSWS  DPE QRKKRVASYK+Y+VEGKVKGSF+KS RWLKDR
Sbjct: 63  --KKGKSTNGSVS--KSWSFNDPELQRKKRVASYKVYTVEGKVKGSFKKSFRWLKDR 115

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388517509|gb|AFK46816.1| unknown [Medicago truncatula]

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/125 (53%), Positives = 79/125 (63%), Gaps = 15/125 (12%)

Query: 8   RSKSYGPGMMRNHNHMEITGYYDPPPPRAPAAASY---DLRCYSASYAQSQMSNFDNNFN 64
           RSKSY  G       M+I  Y    P    ++  Y   DLRCYSASYA S     +   N
Sbjct: 5   RSKSYADG------RMQIEPY--SAPSNGASSNVYGMQDLRCYSASYASSVHPTQNQIGN 56

Query: 65  YNVKDFNTKKGKITSGSSSSSKSWSLADPEFQRKKRVASYKMYSVEGKVKGSFRKSVRWL 124
            N  D   KKGK T+GS+S  KSWSL+DPE QRKKRVASYK+YSVEGK+KGS RKS +W+
Sbjct: 57  NN--DVKFKKGKSTNGSTS--KSWSLSDPELQRKKRVASYKVYSVEGKLKGSLRKSFKWI 112

Query: 125 KDRSD 129
           KDR +
Sbjct: 113 KDRCN 117

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388511571|gb|AFK43847.1| unknown [Lotus japonicus]

 Score =  102 bits (254), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/121 (51%), Positives = 75/121 (61%), Gaps = 13/121 (10%)

Query: 8   RSKSYGPGMMRNHNHMEITGYYDPPPPRAPAAASYDLRCYSASYAQS-QMSNFDNNFNYN 66
           RSKSY  G M+           +P           DLRCYSASYA S   +     F  +
Sbjct: 5   RSKSYADGRMQQQ--------IEPYSGGGGVHGMQDLRCYSASYASSVHPAQTQTQFGND 56

Query: 67  VKDFNTKKGKITSGSSSSSKSWSLADPEFQRKKRVASYKMYSVEGKVKGSFRKSVRWLKD 126
           V  F  KKGK T+GS+S  KSWS +DPE QRKKRVASYK+Y+VEG++KGSFRKS +W+KD
Sbjct: 57  VAKF--KKGKSTNGSAS--KSWSFSDPELQRKKRVASYKVYAVEGRLKGSFRKSFKWIKD 112

Query: 127 R 127
           R
Sbjct: 113 R 113

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224088800|ref|XP_002308546.1| predicted protein [Populus trichocarpa] gi|222854522|gb|EEE92069.1| predicted protein [Populus trichocarpa]

 Score =  102 bits (254), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 85/124 (68%), Gaps = 8/124 (6%)

Query: 6   YNRSKSYGPGMMRNHNHMEITGYYDPPPPRAPAAASYDLRCYSASYAQSQMSNFDNNFNY 65
           YNRSKSY       ++ M++  Y     P+ P  +SY+LR YS SYAQ+Q++N + N N 
Sbjct: 4   YNRSKSYS--YSHGNDMMQMESY---NGPQRPPTSSYELRSYSTSYAQTQVANGNYNTNN 58

Query: 66  NV--KDFNTKKGKITSGSSSSSKSWSLADPEFQRKKRVASYKMYSVEGKVKGSFRKSVRW 123
               +DF  KKGK  +GSSSS    S  DPEFQRKKRVASYKMYSVEGKVKG+FRKS RW
Sbjct: 59  FGNNRDFKAKKGKGYTGSSSSKSW-SFDDPEFQRKKRVASYKMYSVEGKVKGTFRKSFRW 117

Query: 124 LKDR 127
           +KDR
Sbjct: 118 IKDR 121

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725801|ref|NP_001236849.1| uncharacterized protein LOC100306567 [Glycine max] gi|255628905|gb|ACU14797.1| unknown [Glycine max]

 Score =  102 bits (253), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 66/131 (50%), Positives = 76/131 (58%), Gaps = 34/131 (25%)

Query: 8   RSKSYGPGMMRNHNHMEITGYYDPPPPRAPAAASYDLRCYSASYA---------QSQMSN 58
           RSKSYG G       M+I  Y              DLRCYSASYA         Q+QM N
Sbjct: 5   RSKSYGDG------RMQIGAY--------RGTNMQDLRCYSASYASSVHPTTTQQTQMGN 50

Query: 59  FDNNFNYNVKDFNTKKGKITSGSSSSSKSWSLADPEFQRKKRVASYKMYSVEGKVKGSFR 118
            D  F         KKGK T+GS+S  KSWS +DPE QRKKRVASYK+Y+VEGK+KGS R
Sbjct: 51  SDAKF---------KKGKSTNGSTS--KSWSFSDPELQRKKRVASYKVYAVEGKLKGSLR 99

Query: 119 KSVRWLKDRSD 129
           KS +W KDR +
Sbjct: 100 KSFKWFKDRCN 110

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388499238|gb|AFK37685.1| unknown [Medicago truncatula]

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/125 (52%), Positives = 78/125 (62%), Gaps = 15/125 (12%)

Query: 8   RSKSYGPGMMRNHNHMEITGYYDPPPPRAPAAASY---DLRCYSASYAQSQMSNFDNNFN 64
           RSKSY  G       M+I  Y    P    ++  Y   DLRCYSASYA S     +   N
Sbjct: 5   RSKSYADG------RMQIEPY--SAPSNGASSNVYGMQDLRCYSASYASSVHPTQNQIGN 56

Query: 65  YNVKDFNTKKGKITSGSSSSSKSWSLADPEFQRKKRVASYKMYSVEGKVKGSFRKSVRWL 124
            N  D   KKGK T+GS+S  KSWS +DPE QRKKRVASYK+YSVEGK+KGS RKS +W+
Sbjct: 57  NN--DVKFKKGKSTNGSTS--KSWSFSDPELQRKKRVASYKVYSVEGKLKGSLRKSFKWI 112

Query: 125 KDRSD 129
           KDR +
Sbjct: 113 KDRCN 117

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	145
TAIR|locus:2047700	116	AT2G19460 "AT2G19460" [Arabido	0.248	0.310	0.694	6.2e-14
TAIR|locus:2143059	105	AT5G11970 "AT5G11970" [Arabido	0.482	0.666	0.505	9.1e-13
TAIR|locus:2088227	102	AT3G13910 "AT3G13910" [Arabido	0.248	0.352	0.666	7.6e-09
TAIR|locus:2030295	127	AT1G72720 "AT1G72720" [Arabido	0.255	0.291	0.621	2e-08
TAIR|locus:1006230186	124	AT3G05725 "AT3G05725" [Arabido	0.234	0.274	0.617	1.1e-07
TAIR|locus:2081630	110	AT3G62640 "AT3G62640" [Arabido	0.262	0.345	0.552	1.4e-07
TAIR|locus:2062018	110	AT2G47480 "AT2G47480" [Arabido	0.262	0.345	0.526	2.3e-07
TAIR|locus:2140598	87	AT4G09890 "AT4G09890" [Arabido	0.248	0.413	0.472	3.4e-06

TAIR|locus:2047700 AT2G19460 "AT2G19460" [Arabidopsis thaliana (taxid:3702)]

 Score = 147 (56.8 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
 Identities = 25/36 (69%), Positives = 32/36 (88%)

Query:    92 DPEFQRKKRVASYKMYSVEGKVKGSFRKSVRWLKDR 127
             DP+ QRKKRV SY+ Y+VEGK+KGSFRKS +W+KD+
Sbjct:    75 DPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDK 110

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2143059 AT5G11970 "AT5G11970" [Arabidopsis thaliana (taxid:3702)]

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 43/85 (50%), Positives = 46/85 (54%)

Query:    43 DLRCYSASYAQSQMSNFDNNFNYNVKDFNXXXXXXXXXXXXXXXXXXLADPEFQRKKRVA 102
             D R YSASY   +     NN  Y+VK                     + DPE QRKKRVA
Sbjct:    27 DFRSYSASYGTRE-----NNI-YDVKK---------EKSIARSKSWGITDPELQRKKRVA 71

Query:   103 SYKMYSVEGKVKGSFRKSVRWLKDR 127
             SYKMY VEGKVKGSFR S RWLK R
Sbjct:    72 SYKMYGVEGKVKGSFRNSFRWLKQR 96

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2088227 AT3G13910 "AT3G13910" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 24/36 (66%), Positives = 30/36 (83%)

Query:    91 ADPEFQRKKRVASYKMYSVEGKVKGSFRKSVRWLKD 126
             +DPE +RK+RVA YK+YSVE K+KGS RKS +W KD
Sbjct:    62 SDPESRRKRRVAGYKVYSVEQKMKGSIRKSFKWFKD 97

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2030295 AT1G72720 "AT1G72720" [Arabidopsis thaliana (taxid:3702)]

 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 23/37 (62%), Positives = 29/37 (78%)

Query:    90 LADPEFQRKKRVASYKMYSVEGKVKGSFRKSVRWLKD 126
             L + E QRKKRVASY +Y VEG+VKGS +KS +W K+
Sbjct:    81 LCEAEIQRKKRVASYNVYGVEGRVKGSMKKSFKWFKE 117

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:1006230186 AT3G05725 "AT3G05725" [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 21/34 (61%), Positives = 28/34 (82%)

Query:    92 DPEFQRKKRVASYKMYSVEGKVKGSFRKSVRWLK 125
             DPE +RK+RVA YK+YS EGK+K + RKS +W+K
Sbjct:    81 DPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIK 114

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2081630 AT3G62640 "AT3G62640" [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 21/38 (55%), Positives = 29/38 (76%)

Query:    90 LADPEFQRKKRVASYKMYSVEGKVKGSFRKSVRWLKDR 127
             L D E +RKKR+A+YK Y++EGKVK + +K   W+KDR
Sbjct:    66 LIDAETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDR 103

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2062018 AT2G47480 "AT2G47480" [Arabidopsis thaliana (taxid:3702)]

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 20/38 (52%), Positives = 29/38 (76%)

Query:    90 LADPEFQRKKRVASYKMYSVEGKVKGSFRKSVRWLKDR 127
             L+D E +RKKR+A YK Y+VEGKVK + +   RW+K++
Sbjct:    65 LSDAEMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNK 102

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2140598 AT4G09890 "AT4G09890" [Arabidopsis thaliana (taxid:3702)]

 Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 17/36 (47%), Positives = 28/36 (77%)

Query:    92 DPEFQRKKRVASYKMYSVEGKVKGSFRKSVRWLKDR 127
             DPE +RKKRVASY +++ E K+K + + S +W+K++
Sbjct:    40 DPEMKRKKRVASYNLFATEEKLKSTLKNSFKWIKNK 75


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.131   0.390    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      145       117   0.00091  102 3  11 22  0.48    30
                                                     29  0.46    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  578 (61 KB)
  Total size of DFA:  134 KB (2083 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.77u 0.19s 10.96t   Elapsed:  00:00:01
  Total cpu time:  10.77u 0.19s 10.96t   Elapsed:  00:00:01
  Start:  Fri May 10 22:19:56 2013   End:  Fri May 10 22:19:57 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	145
pfam12023	47	pfam12023, DUF3511, Domain of unknown function (DU	1e-16

>gnl|CDD|204810 pfam12023, DUF3511, Domain of unknown function (DUF3511)

 Score = 68.5 bits (168), Expect = 1e-16
 Identities = 25/40 (62%), Positives = 34/40 (85%)

Query: 88  WSLADPEFQRKKRVASYKMYSVEGKVKGSFRKSVRWLKDR 127
           W L+DPE +R++RVA+YK Y+VEGKVK S RKS +W+KD+
Sbjct: 1   WGLSDPEMKRRRRVAAYKAYAVEGKVKASLRKSFKWIKDK 40

This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is about 50 amino acids in length. This domain has two completely conserved residues (Y and K) that may be functionally important. Length = 47

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	145
PF12023	47	DUF3511: Domain of unknown function (DUF3511); Int	99.96

>PF12023 DUF3511: Domain of unknown function (DUF3511); InterPro: IPR021899 This presumed domain is functionally uncharacterised

Probab=99.96  E-value=2e-30  Score=171.65  Aligned_cols=46  Identities=61%  Similarity=1.095  Sum_probs=45.2

Q ss_pred             ccCCChhHhhhhhhheeeeeeeecceehhhcccchhhhcchhhhHh
Q 032229           88 WSLADPEFQRKKRVASYKMYSVEGKVKGSFRKSVRWLKDRSDLGIC  133 (145)
Q Consensus        88 w~~~dpE~kRkkRVA~Yk~Y~vEGKvK~S~R~sfrWiK~k~s~iv~  133 (145)
                      |+|+|||+|||||||+||+|+||||||+|||+||||||++|++||+
T Consensus         1 w~~~dpE~kRkkRVA~Yk~y~vEGKvK~S~R~sfrWiK~k~s~iv~   46 (47)
T PF12023_consen    1 WGFNDPEMKRKKRVASYKVYAVEGKVKGSLRKSFRWIKNKCSRIVY   46 (47)
T ss_pred             CCCCCHHHHHHHHHHhhheeeeehHHHHHHHhhhHHHHHHhhHhhc
Confidence            8999999999999999999999999999999999999999999986

This domain is found in eukaryotes. This domain is about 50 amino acids in length. This domain has two completely conserved residues (Y and K) that may be functionally important.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00