Citrus Sinensis ID: 032264
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 144 | ||||||
| 357465013 | 154 | HVA22-like protein e [Medicago truncatul | 0.993 | 0.928 | 0.664 | 7e-51 | |
| 388512045 | 152 | unknown [Lotus japonicus] | 0.993 | 0.940 | 0.673 | 1e-50 | |
| 351726453 | 146 | uncharacterized protein LOC100305818 [Gl | 0.986 | 0.972 | 0.675 | 6e-50 | |
| 356516527 | 146 | PREDICTED: protein HVA22-like [Glycine m | 0.986 | 0.972 | 0.668 | 3e-49 | |
| 224134018 | 175 | predicted protein [Populus trichocarpa] | 0.958 | 0.788 | 0.719 | 1e-48 | |
| 225456377 | 141 | PREDICTED: HVA22-like protein e [Vitis v | 0.972 | 0.992 | 0.675 | 3e-47 | |
| 255540165 | 114 | Protein HVA22, putative [Ricinus communi | 0.791 | 1.0 | 0.756 | 4e-45 | |
| 297795871 | 116 | hypothetical protein ARALYDRAFT_495134 [ | 0.791 | 0.982 | 0.719 | 3e-42 | |
| 449440530 | 118 | PREDICTED: HVA22-like protein d-like [Cu | 0.812 | 0.991 | 0.717 | 4e-42 | |
| 18423191 | 116 | HVA22-like protein e [Arabidopsis thalia | 0.791 | 0.982 | 0.701 | 4e-41 |
| >gi|357465013|ref|XP_003602788.1| HVA22-like protein e [Medicago truncatula] gi|355491836|gb|AES73039.1| HVA22-like protein e [Medicago truncatula] | Back alignment and taxonomy information |
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Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 103/155 (66%), Positives = 120/155 (77%), Gaps = 12/155 (7%)
Query: 1 MSRFWNLIYGVHSLAGPVLMLLYPLYASVVAIESPSKVDDEQWLAYWILYSFLTLTEMVL 60
M++ W LI +HSLAGPV+ LLYPLYASVVAIESPSK+DDEQWLAYWI+YSFLTL EM++
Sbjct: 1 MTKLWTLITQLHSLAGPVVTLLYPLYASVVAIESPSKLDDEQWLAYWIIYSFLTLGEMLM 60
Query: 61 QPVLEWIPIWYSVKLVLAAWLVLPQFRGAAFIYERFVRQQIRQYRGGKDHHQHQHR---- 116
QP LEWIPIWY VKL++AAWLVLPQF GAA++YERFVR IR+Y K+H + H
Sbjct: 61 QPALEWIPIWYDVKLLVAAWLVLPQFMGAAYLYERFVRDHIRKYVTEKEHQRVHHHPPEN 120
Query: 117 -------KSSPTGTGKGKNKFVDFIMPKKGEHEAY 144
K SPTG K K KFVDFI+PKKG+ EAY
Sbjct: 121 NQQQKQNKKSPTG-AKTKKKFVDFIIPKKGDQEAY 154
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Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388512045|gb|AFK44084.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
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| >gi|351726453|ref|NP_001237127.1| uncharacterized protein LOC100305818 [Glycine max] gi|255626697|gb|ACU13693.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|356516527|ref|XP_003526945.1| PREDICTED: protein HVA22-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|224134018|ref|XP_002321716.1| predicted protein [Populus trichocarpa] gi|222868712|gb|EEF05843.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225456377|ref|XP_002284092.1| PREDICTED: HVA22-like protein e [Vitis vinifera] gi|297734449|emb|CBI15696.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255540165|ref|XP_002511147.1| Protein HVA22, putative [Ricinus communis] gi|223550262|gb|EEF51749.1| Protein HVA22, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|297795871|ref|XP_002865820.1| hypothetical protein ARALYDRAFT_495134 [Arabidopsis lyrata subsp. lyrata] gi|297311655|gb|EFH42079.1| hypothetical protein ARALYDRAFT_495134 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|449440530|ref|XP_004138037.1| PREDICTED: HVA22-like protein d-like [Cucumis sativus] gi|449523922|ref|XP_004168972.1| PREDICTED: HVA22-like protein d-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|18423191|ref|NP_568744.1| HVA22-like protein e [Arabidopsis thaliana] gi|57012614|sp|Q9FED2.1|HA22E_ARATH RecName: Full=HVA22-like protein e; Short=AtHVA22e gi|9931544|gb|AAG02213.1|AF290892_1 AtHVA22e [Arabidopsis thaliana] gi|11225589|gb|AAG33060.1|AF313484_1 AtHVA22e [Arabidopsis thaliana] gi|21537153|gb|AAM61494.1| abscisic acid-induced-like protein [Arabidopsis thaliana] gi|114050591|gb|ABI49445.1| At5g50720 [Arabidopsis thaliana] gi|210062170|gb|ACJ06134.1| HVA22E [Arabidopsis thaliana] gi|210062172|gb|ACJ06135.1| HVA22E [Arabidopsis thaliana] gi|210062174|gb|ACJ06136.1| HVA22E [Arabidopsis thaliana] gi|210062176|gb|ACJ06137.1| HVA22E [Arabidopsis thaliana] gi|210062178|gb|ACJ06138.1| HVA22E [Arabidopsis thaliana] gi|210062180|gb|ACJ06139.1| HVA22E [Arabidopsis thaliana] gi|210062182|gb|ACJ06140.1| HVA22E [Arabidopsis thaliana] gi|210062184|gb|ACJ06141.1| HVA22E [Arabidopsis thaliana] gi|210062186|gb|ACJ06142.1| HVA22E [Arabidopsis thaliana] gi|210062188|gb|ACJ06143.1| HVA22E [Arabidopsis thaliana] gi|210062190|gb|ACJ06144.1| HVA22E [Arabidopsis thaliana] gi|210062192|gb|ACJ06145.1| HVA22E [Arabidopsis thaliana] gi|210062194|gb|ACJ06146.1| HVA22E [Arabidopsis thaliana] gi|210062196|gb|ACJ06147.1| HVA22E [Arabidopsis thaliana] gi|210062198|gb|ACJ06148.1| HVA22E [Arabidopsis thaliana] gi|210062200|gb|ACJ06149.1| HVA22E [Arabidopsis thaliana] gi|210062202|gb|ACJ06150.1| HVA22E [Arabidopsis thaliana] gi|210062204|gb|ACJ06151.1| HVA22E [Arabidopsis thaliana] gi|210062206|gb|ACJ06152.1| HVA22E [Arabidopsis thaliana] gi|210062208|gb|ACJ06153.1| HVA22E [Arabidopsis thaliana] gi|210062210|gb|ACJ06154.1| HVA22E [Arabidopsis thaliana] gi|210062212|gb|ACJ06155.1| HVA22E [Arabidopsis thaliana] gi|210062214|gb|ACJ06156.1| HVA22E [Arabidopsis thaliana] gi|210062216|gb|ACJ06157.1| HVA22E [Arabidopsis thaliana] gi|210062218|gb|ACJ06158.1| HVA22E [Arabidopsis thaliana] gi|210062220|gb|ACJ06159.1| HVA22E [Arabidopsis thaliana] gi|210062222|gb|ACJ06160.1| HVA22E [Arabidopsis thaliana] gi|210062224|gb|ACJ06161.1| HVA22E [Arabidopsis thaliana] gi|210062226|gb|ACJ06162.1| HVA22E [Arabidopsis thaliana] gi|210062228|gb|ACJ06163.1| HVA22E [Arabidopsis thaliana] gi|210062230|gb|ACJ06164.1| HVA22E [Arabidopsis thaliana] gi|210062234|gb|ACJ06166.1| HVA22E [Arabidopsis thaliana] gi|332008600|gb|AED95983.1| HVA22-like protein e [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 144 | ||||||
| TAIR|locus:2163290 | 116 | HVA22E "AT5G50720" [Arabidopsi | 0.791 | 0.982 | 0.701 | 8.4e-42 | |
| TAIR|locus:2117318 | 135 | HVA22D "AT4G24960" [Arabidopsi | 0.923 | 0.985 | 0.562 | 1.1e-39 | |
| TAIR|locus:2019225 | 177 | HVA22A "AT1G74520" [Arabidopsi | 0.590 | 0.480 | 0.611 | 7.3e-27 | |
| TAIR|locus:2052339 | 158 | HVA22F "AT2G42820" [Arabidopsi | 0.722 | 0.658 | 0.514 | 2.5e-26 | |
| TAIR|locus:2154139 | 167 | HVA22B "AT5G62490" [Arabidopsi | 0.590 | 0.508 | 0.576 | 7.8e-23 | |
| TAIR|locus:2205055 | 184 | HVA22C "AT1G69700" [Arabidopsi | 0.638 | 0.5 | 0.532 | 4.3e-22 | |
| WB|WBGene00022127 | 183 | yop-1 [Caenorhabditis elegans | 0.708 | 0.557 | 0.371 | 3.3e-15 | |
| UNIPROTKB|Q96HR9 | 184 | REEP6 "Receptor expression-enh | 0.694 | 0.543 | 0.382 | 4.2e-15 | |
| ZFIN|ZDB-GENE-040912-98 | 208 | reep6 "receptor accessory prot | 0.729 | 0.504 | 0.355 | 1.4e-14 | |
| ASPGD|ASPL0000048393 | 169 | AN2279 [Emericella nidulans (t | 0.652 | 0.556 | 0.36 | 2.3e-14 |
| TAIR|locus:2163290 HVA22E "AT5G50720" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 80/114 (70%), Positives = 96/114 (84%)
Query: 1 MSRFWNLIYGVHSLAGPVLMLLYPLYASVVAIESPSKVDDEQWLAYWILYSFLTLTEMVL 60
M++ W + +HSLAGPV+MLLYPLYASV+AIESPSKVDDEQWLAYWILYSFLTL+E++L
Sbjct: 1 MTKLWTSLSALHSLAGPVVMLLYPLYASVIAIESPSKVDDEQWLAYWILYSFLTLSELIL 60
Query: 61 QPVLEWIPIWYSVKLVLAAWLVLPQFRGAAFIYERFVRQQIRQYRGGKDHHQHQ 114
Q +LEWIPIWY+ KLV AWLVLPQFRGAAFIY + VR+Q ++Y K +HQ
Sbjct: 61 QSLLEWIPIWYTAKLVFVAWLVLPQFRGAAFIYNKVVREQFKKYGILKPKVEHQ 114
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| TAIR|locus:2117318 HVA22D "AT4G24960" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2019225 HVA22A "AT1G74520" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2052339 HVA22F "AT2G42820" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2154139 HVA22B "AT5G62490" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2205055 HVA22C "AT1G69700" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| WB|WBGene00022127 yop-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q96HR9 REEP6 "Receptor expression-enhancing protein 6" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-040912-98 reep6 "receptor accessory protein 6" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000048393 AN2279 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 144 | |||
| pfam03134 | 94 | pfam03134, TB2_DP1_HVA22, TB2/DP1, HVA22 family | 3e-34 | |
| COG5052 | 186 | COG5052, YOP1, Protein involved in membrane traffi | 4e-19 |
| >gnl|CDD|217381 pfam03134, TB2_DP1_HVA22, TB2/DP1, HVA22 family | Back alignment and domain information |
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Score = 114 bits (288), Expect = 3e-34
Identities = 43/86 (50%), Positives = 59/86 (68%)
Query: 13 SLAGPVLMLLYPLYASVVAIESPSKVDDEQWLAYWILYSFLTLTEMVLQPVLEWIPIWYS 72
L ++ LYP YAS A+ES K DD QWL YW++YSFLTL E +L WIP +Y
Sbjct: 6 RLLSNLIGFLYPAYASYKALESKDKEDDTQWLTYWVVYSFLTLFESFSDIILSWIPFYYE 65
Query: 73 VKLVLAAWLVLPQFRGAAFIYERFVR 98
+KL+ WLVLP+ +GA++IY++F+R
Sbjct: 66 LKLLFLVWLVLPKTQGASYIYDKFIR 91
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This family includes members from a wide variety of eukaryotes. It includes the TB2/DP1 (deleted in polyposis) protein, which in humans is deleted in severe forms of familial adenomatous polyposis, an autosomal dominant oncological inherited disease. The family also includes the plant protein of known similarity to TB2/DP1, the HVA22 abscisic acid-induced protein, which is thought to be a regulatory protein. Length = 94 |
| >gnl|CDD|227385 COG5052, YOP1, Protein involved in membrane traffic [Intracellular trafficking and secretion] | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 144 | |||
| KOG1725 | 186 | consensus Protein involved in membrane traffic (YO | 99.97 | |
| PF03134 | 94 | TB2_DP1_HVA22: TB2/DP1, HVA22 family; InterPro: IP | 99.97 | |
| KOG1726 | 225 | consensus HVA22/DP1 gene product-related proteins | 99.96 | |
| COG5052 | 186 | YOP1 Protein involved in membrane traffic [Intrace | 99.88 | |
| KOG1726 | 225 | consensus HVA22/DP1 gene product-related proteins | 89.78 |
| >KOG1725 consensus Protein involved in membrane traffic (YOP1/TB2/DP1/HVA22 family) [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
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Probab=99.97 E-value=3.4e-31 Score=207.95 Aligned_cols=111 Identities=45% Similarity=0.785 Sum_probs=105.8
Q ss_pred HHHHHHhHHHHHHhHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHhc
Q 032264 4 FWNLIYGVHSLAGPVLMLLYPLYASVVAIESPSKVDDEQWLAYWILYSFLTLTEMVLQPVLEWIPIWYSVKLVLAAWLVL 83 (144)
Q Consensus 4 ~~~ll~~l~~l~~~~vg~lyPay~S~kaL~~~~~~~~~~WL~YWiv~a~~~~~E~~~~~il~wiPfY~~iKl~flvwL~~ 83 (144)
+|-+++..+.++|+++|++||+|+|++|+|++++.|+++||+||++||++.++|...+.+++|+|+||++|++|++||.+
T Consensus 50 v~l~~g~~~~l~cn~ig~~yP~y~Sv~aIes~~k~dD~~wL~YWivys~lslie~~~~~il~~iP~y~~~K~~fl~~l~l 129 (186)
T KOG1725|consen 50 VYLLFGSGGPLLCNLIGFLYPAYASVKAIESPSKDDDTQWLTYWIVYSILSLVEFFSVAILSWIPFYWYAKLIFLLWLVL 129 (186)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHhhhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHhc
Confidence 45567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHhHHHhhhcccchhhhh
Q 032264 84 PQFRGAAFIYERFVRQQIRQYRGGKDHHQHQ 114 (144)
Q Consensus 84 P~~~GA~~lY~~~i~P~l~~~e~~ID~~l~~ 114 (144)
|+++||..+|+++++|++.++..++|+..+.
T Consensus 130 P~~~Ga~~iY~~~vrp~~~~~~~~~~~~~~~ 160 (186)
T KOG1725|consen 130 PQFNGAAIIYNHIVRPFFLKHSREIDDIEDA 160 (186)
T ss_pred cCCCCceeeechhhhhhhhhhhhhhhhhhhc
Confidence 9999999999999999999999999988754
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| >PF03134 TB2_DP1_HVA22: TB2/DP1, HVA22 family; InterPro: IPR004345 This family includes members from a wide variety of eukaryotes | Back alignment and domain information |
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| >KOG1726 consensus HVA22/DP1 gene product-related proteins [Defense mechanisms] | Back alignment and domain information |
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| >COG5052 YOP1 Protein involved in membrane traffic [Intracellular trafficking and secretion] | Back alignment and domain information |
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| >KOG1726 consensus HVA22/DP1 gene product-related proteins [Defense mechanisms] | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00