Citrus Sinensis ID: 032333

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140---
Protein Sequence
MAMAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHcccccEEEEEEEEcccEEEEEEEcccccccHHHHHccccccccEEEEEEEEEEcccccccccEEEEEEcccccccHHHHHHHHHHHHHHHHHccEEEEEEEcccccccHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccHHHHcccccEEcHHHHHHHHHHHHHccccEEEEEEEccccEEEEEEEccccccHHHHHccccccccEEEEEEEEEEcccccEEEEEEEEEEccccccHHHHHHHHHHHHHHHcccccccEEEEEcccccccHHHHHHHHc
Coil and Loop (DISEMBL)
MAMAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKideksklvtvdkvggagegyedlaaslpdddcryavfdfdfvtvdncrkSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIhyevqatdptemgfDVIMDRAK
Flexible Loop (DISEMBL)
mamafkmattgmwvaDECKNSFMEMKWKKVHRYIvfkideksklvTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFfiawaptasrIRAKMLYATSKDGLRRVLDGIhyevqatdptemgfDVIMDRAK
Low Complexity Region (SEG)
MAMAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK
Disordered region (IsUnstruct)
****FKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDV******
Disordered Region (DISOPRED)
**********GMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK
Disordered Region (DISEMBL)
********TTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK
Disordered Region (DISPRO)
**********GMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAMAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	143	2.2.26 [Sep-21-2011]
Q9ZNT3	143	Actin-depolymerizing fact	yes	no	1.0	1.0	0.853	2e-68
O49606	141	Actin-depolymerizing fact	no	no	0.986	1.0	0.794	3e-65
Q10P87	143	Actin-depolymerizing fact	yes	no	1.0	1.0	0.783	7e-64
Q9ZSK2	146	Actin-depolymerizing fact	no	no	0.951	0.931	0.632	9e-49
Q8SAG3	143	Actin-depolymerizing fact	no	no	0.979	0.979	0.647	1e-48
Q2QLT8	145	Actin-depolymerizing fact	no	no	0.944	0.931	0.592	4e-48
Q9FVI2	139	Actin-depolymerizing fact	N/A	no	0.944	0.971	0.614	7e-48
Q6EUH7	139	Actin-depolymerizing fact	no	no	0.944	0.971	0.607	4e-46
Q9AY76	145	Actin-depolymerizing fact	no	no	0.944	0.931	0.585	5e-46
Q9LQ81	140	Actin-depolymerizing fact	no	no	0.937	0.957	0.589	6e-46

>sp|Q9ZNT3|ADF5_ARATH Actin-depolymerizing factor 5 OS=Arabidopsis thaliana GN=ADF5 PE=1 SV=1

 Score =  256 bits (655), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 122/143 (85%), Positives = 132/143 (92%)

Query: 1   MAMAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDL 60
           MAMAFKMATTGM V DEC +SFM+MKWKKVHRYIVFKI+EKS+ VTVDKVGGAGE Y DL
Sbjct: 1   MAMAFKMATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDL 60

Query: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG 120
             SLP DDCRYAVFDFDFVTVDNCRKSKIFFIAW+P AS+IRAK+LYATSKDGLRRVL+G
Sbjct: 61  EDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGFDVIMDRAK 143
           IHYE+QATDPTEMGFD+I DRAK
Sbjct: 121 IHYELQATDPTEMGFDIIQDRAK 143

Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.
Arabidopsis thaliana (taxid: 3702)

>sp|O49606|ADF9_ARATH Actin-depolymerizing factor 9 OS=Arabidopsis thaliana GN=ADF9 PE=2 SV=2

 Score =  246 bits (628), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 112/141 (79%), Positives = 127/141 (90%)

Query: 3   MAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAA 62
           MA K AT+GMW+ D+CK SFMEMKWKKVHRY+V+K++EKS+ VTVDKVG AGE Y+DLAA
Sbjct: 1   MALKTATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAA 60

Query: 63  SLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIH 122
           SLP+DDCRYAVFDFD+VTVDNCR SKIFFI W+P ASRIR KM+YATSK GLRRVLDG+H
Sbjct: 61  SLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVH 120

Query: 123 YEVQATDPTEMGFDVIMDRAK 143
           YE+QATDPTEMGFD I DRAK
Sbjct: 121 YELQATDPTEMGFDKIQDRAK 141

Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.

Arabidopsis thaliana (taxid: 3702)

>sp|Q10P87|ADF5_ORYSJ Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica GN=ADF5 PE=2 SV=1

 Score =  241 bits (616), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 112/143 (78%), Positives = 129/143 (90%)

Query: 1   MAMAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDL 60
           MAMA+KMAT GM V +EC+  FMEMKWKKVHR++V+KIDE+S+ V VDKVGG GEGYE+L
Sbjct: 1   MAMAYKMATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEEL 60

Query: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG 120
            A+LP DDCRYAVFDFDFVTVDNC+KSKIFFIAW+PTASRIRAK+LYATSK GLRRVLDG
Sbjct: 61  VAALPTDDCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDG 120

Query: 121 IHYEVQATDPTEMGFDVIMDRAK 143
           +HYEVQATD +EMG+DVI  RA+
Sbjct: 121 VHYEVQATDSSEMGYDVIRGRAQ 143

Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9ZSK2|ADF6_ARATH Actin-depolymerizing factor 6 OS=Arabidopsis thaliana GN=ADF6 PE=1 SV=1

 Score =  191 bits (486), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 107/136 (78%)

Query: 8   ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDD 67
           A +GM VADE K +F+E++ KK HRY+VFKIDE  K V V+K G   E Y+D  ASLPD+
Sbjct: 11  AISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDN 70

Query: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQA 127
           DCRYAV+DFDFVT +NC+KSKIFF AW+P+ S IRAK+LY+TSKD L R L GIHYE+QA
Sbjct: 71  DCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQA 130

Query: 128 TDPTEMGFDVIMDRAK 143
           TDPTE+  +V+ +RA 
Sbjct: 131 TDPTEVDLEVLRERAN 146

Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8SAG3|ADF_VITVI Actin-depolymerizing factor OS=Vitis vinifera PE=2 SV=1

 Score =  191 bits (485), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 92/142 (64%), Positives = 119/142 (83%), Gaps = 2/142 (1%)

Query: 3   MAFK--MATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDL 60
           M+F+   A++GM VAD  KN+F+E+K KKVHRY++FKIDEK K V V+K GG  E +++ 
Sbjct: 1   MSFRGLNASSGMGVADHSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEF 60

Query: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG 120
           AA+LP++DCRYAV+DFDFVT +NC+KSKIFFIAW+P +SRIRAKMLYATSK+  RR LDG
Sbjct: 61  AAALPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKMLYATSKERFRRELDG 120

Query: 121 IHYEVQATDPTEMGFDVIMDRA 142
           +HYE+QATDPTEM  +V+ +RA
Sbjct: 121 VHYEIQATDPTEMDLEVLRERA 142

Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.

Vitis vinifera (taxid: 29760)

>sp|Q2QLT8|ADF11_ORYSJ Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica GN=ADF11 PE=2 SV=1

 Score =  189 bits (481), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 80/135 (59%), Positives = 111/135 (82%)

Query: 8   ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDD 67
           A++G+ VA ECK +F+E++ KK HRY++FKID+K K V V+K G + E ++D   SLP+ 
Sbjct: 10  ASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPES 69

Query: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQA 127
           DCRYA++DFDFVT +NC+KSKIFF+AW+P+ SRIRAKMLYATSK+  RR LDG+HYE+QA
Sbjct: 70  DCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEIQA 129

Query: 128 TDPTEMGFDVIMDRA 142
           TDP+E+  +++ +RA
Sbjct: 130 TDPSELDIELLRERA 144

Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9FVI2|ADF1_PETHY Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1

 Score =  189 bits (479), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 83/135 (61%), Positives = 107/135 (79%)

Query: 8   ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDD 67
           A +GM V D+CK  F+E+K K+ HR+IV+KI+EK K V V+K+G   E YED AASLP++
Sbjct: 4   AASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASLPEN 63

Query: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQA 127
           +CRYAV+DFDFVT +NC+KS+IFFIAW P  +R+R+KM+YA+SKD  +R LDGI  E+QA
Sbjct: 64  ECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVELQA 123

Query: 128 TDPTEMGFDVIMDRA 142
            DPTEMG DVI  RA
Sbjct: 124 CDPTEMGLDVIQSRA 138

Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.

Petunia hybrida (taxid: 4102)

>sp|Q6EUH7|ADF1_ORYSJ Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1

 Score =  182 bits (463), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 82/135 (60%), Positives = 105/135 (77%)

Query: 8   ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDD 67
           + +GM V DECK  F+E+K K+  R+IVFKI+EK + V VD++G  GE Y+D  A LP D
Sbjct: 4   SASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLPAD 63

Query: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQA 127
           +CRYAVFDFDFVT +NC+KSKIFFI+WAP  SR+R+KMLYA+SKD  +R LDGI  E+QA
Sbjct: 64  ECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQA 123

Query: 128 TDPTEMGFDVIMDRA 142
           TDP+EM  D++  RA
Sbjct: 124 TDPSEMSMDIVKSRA 138

Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9AY76|ADF2_ORYSJ Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica GN=ADF2 PE=2 SV=1

 Score =  182 bits (463), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 79/135 (58%), Positives = 110/135 (81%)

Query: 8   ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDD 67
           A++GM VA + +++F+E++ KK  RY++FKI+EK K V V+K G   E Y+D  ASLP++
Sbjct: 10  ASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPEN 69

Query: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQA 127
           DCRYA++DFDFVT +N +KSKIFFIAW+P+ SRIRAKMLY+TSKD +++ LDG HYE+QA
Sbjct: 70  DCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQA 129

Query: 128 TDPTEMGFDVIMDRA 142
           TDPTE+  +V+ +RA
Sbjct: 130 TDPTEVDLEVLRERA 144

Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9LQ81|ADF10_ARATH Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1

 Score =  182 bits (461), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 79/134 (58%), Positives = 106/134 (79%)

Query: 8   ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDD 67
           + +GM V+DECK  F+E+K K+ +R+IVFKIDEK++ V +DK+G   E YED   S+P+D
Sbjct: 4   SASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPED 63

Query: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQA 127
           +CRYAV+D+DF T +NC+KSKIFFIAW+P  SR+R+KMLYA+SKD  +R LDGI  E+QA
Sbjct: 64  ECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQA 123

Query: 128 TDPTEMGFDVIMDR 141
           TDP+EM  D+I  R
Sbjct: 124 TDPSEMSLDIIKGR 137

Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	143
224078252	143	predicted protein [Populus trichocarpa]	1.0	1.0	0.923	3e-73
351725399	143	uncharacterized protein LOC100526982 [Gl	1.0	1.0	0.930	2e-72
224105181	143	predicted protein [Populus trichocarpa]	1.0	1.0	0.909	9e-72
388496012	173	unknown [Lotus japonicus]	1.0	0.826	0.909	9e-72
388510466	173	unknown [Medicago truncatula]	1.0	0.826	0.895	3e-71
225427991	143	PREDICTED: actin-depolymerizing factor 5	1.0	1.0	0.909	6e-71
89276301	141	actin depolymerizing factor 5 [Gossypium	0.979	0.992	0.928	8e-71
449458600	143	PREDICTED: actin-depolymerizing factor 5	1.0	1.0	0.895	1e-70
449489758	142	PREDICTED: actin-depolymerizing factor 5	0.993	1.0	0.894	4e-70
356516593	143	PREDICTED: actin-depolymerizing factor 5	1.0	1.0	0.874	8e-68

>gi|224078252|ref|XP_002305510.1| predicted protein [Populus trichocarpa] gi|118484861|gb|ABK94297.1| unknown [Populus trichocarpa] gi|222848474|gb|EEE86021.1| predicted protein [Populus trichocarpa]

 Score =  279 bits (713), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 132/143 (92%), Positives = 139/143 (97%)

Query: 1   MAMAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDL 60
           MAMAFKMATTGMWV DECKNSF EMKW+KVHRYIVFKIDEKS+LVTVDKVGG GEGY+DL
Sbjct: 1   MAMAFKMATTGMWVTDECKNSFHEMKWRKVHRYIVFKIDEKSRLVTVDKVGGPGEGYDDL 60

Query: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG 120
           AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVL+G
Sbjct: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGFDVIMDRAK 143
           +HYE+QATDPTEMGFD+I DRAK
Sbjct: 121 VHYELQATDPTEMGFDLIRDRAK 143

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725399|ref|NP_001236835.1| uncharacterized protein LOC100526982 [Glycine max] gi|255631302|gb|ACU16018.1| unknown [Glycine max]

 Score =  276 bits (706), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 133/143 (93%), Positives = 135/143 (94%)

Query: 1   MAMAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDL 60
           MAMAFKMATTGMWV DECKNSFMEMKWKKVHRYIVFKIDEKS+LVTVDKVGG GE Y DL
Sbjct: 1   MAMAFKMATTGMWVTDECKNSFMEMKWKKVHRYIVFKIDEKSRLVTVDKVGGPGESYGDL 60

Query: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG 120
           AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAW+PTASRIRAKMLYATSKDGLRR LDG
Sbjct: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKMLYATSKDGLRRALDG 120

Query: 121 IHYEVQATDPTEMGFDVIMDRAK 143
           I YEVQATDP EMGFDVI DRAK
Sbjct: 121 ISYEVQATDPAEMGFDVIQDRAK 143

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105181|ref|XP_002313717.1| predicted protein [Populus trichocarpa] gi|118487354|gb|ABK95505.1| unknown [Populus trichocarpa] gi|222850125|gb|EEE87672.1| predicted protein [Populus trichocarpa]

 Score =  274 bits (700), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 130/143 (90%), Positives = 137/143 (95%)

Query: 1   MAMAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDL 60
           MAMAFKMATTGMWV DECKNSF +MKWK+VHRYIVFKIDEKS+LVTVDKVGG GE Y+DL
Sbjct: 1   MAMAFKMATTGMWVTDECKNSFHQMKWKRVHRYIVFKIDEKSRLVTVDKVGGPGESYDDL 60

Query: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG 120
           AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAP ASRIRAKMLYATSKDGLRRVL+G
Sbjct: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPPASRIRAKMLYATSKDGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGFDVIMDRAK 143
           IHYE+QATDPTEMGFD+I DRAK
Sbjct: 121 IHYELQATDPTEMGFDLIRDRAK 143

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388496012|gb|AFK36072.1| unknown [Lotus japonicus]

 Score =  274 bits (700), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 130/143 (90%), Positives = 135/143 (94%)

Query: 1   MAMAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDL 60
           MAMAFKMATTGMWV DECKNSFMEMKWKKVHRYIVFKIDE+S+LVTVDKVGG GE Y DL
Sbjct: 31  MAMAFKMATTGMWVTDECKNSFMEMKWKKVHRYIVFKIDERSRLVTVDKVGGPGESYADL 90

Query: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG 120
           AASLP DDCRYAVFDFDFVTVDNCRKSKIFFIAW+PTASRIRAK+LYATSKDGLRR LDG
Sbjct: 91  AASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKDGLRRALDG 150

Query: 121 IHYEVQATDPTEMGFDVIMDRAK 143
           I YE+QATDPTEMGFDVI DRAK
Sbjct: 151 ISYELQATDPTEMGFDVIQDRAK 173

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388510466|gb|AFK43299.1| unknown [Medicago truncatula]

 Score =  272 bits (696), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 128/143 (89%), Positives = 135/143 (94%)

Query: 1   MAMAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDL 60
           MAMAFKMATTGMWV DECKNSFMEMKWKKVHRYIVFKIDEK++LVTVDKVGG GE Y+DL
Sbjct: 1   MAMAFKMATTGMWVTDECKNSFMEMKWKKVHRYIVFKIDEKTRLVTVDKVGGPGENYDDL 60

Query: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG 120
           AASLP+DDCRYAVFDFDFVTVDNCRKSKIFFIAW+PTASRIR K+LYATSKDGLRR LDG
Sbjct: 61  AASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIREKILYATSKDGLRRALDG 120

Query: 121 IHYEVQATDPTEMGFDVIMDRAK 143
           I YE+QATDP EMGFDVI DRAK
Sbjct: 121 ISYELQATDPNEMGFDVIQDRAK 143

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427991|ref|XP_002277796.1| PREDICTED: actin-depolymerizing factor 5 [Vitis vinifera] gi|297744627|emb|CBI37889.3| unnamed protein product [Vitis vinifera]

 Score =  271 bits (693), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 130/143 (90%), Positives = 136/143 (95%)

Query: 1   MAMAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDL 60
           MAMAFKMATTGMWV DECKNSFMEMKWKKVHRYIVFKIDE SKLVTVDKVGG GEGY++L
Sbjct: 1   MAMAFKMATTGMWVTDECKNSFMEMKWKKVHRYIVFKIDEGSKLVTVDKVGGPGEGYDEL 60

Query: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG 120
           AASLP DDCRYAVFDFDFVT DNCRKSKIFFIAW+PTASRIRAKMLYATSK+GLRRVLDG
Sbjct: 61  AASLPTDDCRYAVFDFDFVTNDNCRKSKIFFIAWSPTASRIRAKMLYATSKEGLRRVLDG 120

Query: 121 IHYEVQATDPTEMGFDVIMDRAK 143
           IHY++QATDPTEMG DVI DRAK
Sbjct: 121 IHYDMQATDPTEMGMDVIKDRAK 143

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|89276301|gb|ABD66507.1| actin depolymerizing factor 5 [Gossypium hirsutum]

 Score =  271 bits (692), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 130/140 (92%), Positives = 133/140 (95%)

Query: 3   MAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAA 62
           MAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGE Y+D  A
Sbjct: 1   MAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGESYDDFTA 60

Query: 63  SLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIH 122
           SLP DDCRYAVFDFDFVTVDNCRKSKIFFIAW+PTASRIRAKMLYATSKDGLRRVLDGIH
Sbjct: 61  SLPTDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKMLYATSKDGLRRVLDGIH 120

Query: 123 YEVQATDPTEMGFDVIMDRA 142
           YEVQATDPTEMG DVI  +A
Sbjct: 121 YEVQATDPTEMGMDVIKHKA 140

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449458600|ref|XP_004147035.1| PREDICTED: actin-depolymerizing factor 5-like isoform 2 [Cucumis sativus]

 Score =  270 bits (690), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 128/143 (89%), Positives = 135/143 (94%)

Query: 1   MAMAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDL 60
           MAMAFKMATTGMWV+DECKNSFMEMKWKKVHRYIVFKIDE S+LVTVDKVGG  E Y+DL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60

Query: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG 120
            ASLP+DDCRYAVFDFDFVTVDNCRKSKIFFIAW+PT SRIRAK+LYATSKDGLRRVL+G
Sbjct: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGFDVIMDRAK 143
           IHYEVQATDPTEMG DVI DRAK
Sbjct: 121 IHYEVQATDPTEMGIDVIKDRAK 143

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449489758|ref|XP_004158407.1| PREDICTED: actin-depolymerizing factor 5-like, partial [Cucumis sativus]

 Score =  268 bits (686), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 127/142 (89%), Positives = 134/142 (94%)

Query: 1   MAMAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDL 60
           MAMAFKMATTGMWV+DECKNSFMEMKWKKVHRYIVFKIDE S+LVTVDKVGG  E Y+DL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60

Query: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG 120
            ASLP+DDCRYAVFDFDFVTVDNCRKSKIFFIAW+PT SRIRAK+LYATSKDGLRRVL+G
Sbjct: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGFDVIMDRA 142
           IHYEVQATDPTEMG DVI DRA
Sbjct: 121 IHYEVQATDPTEMGIDVIKDRA 142

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356516593|ref|XP_003526978.1| PREDICTED: actin-depolymerizing factor 5-like [Glycine max]

 Score =  261 bits (666), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 125/143 (87%), Positives = 132/143 (92%)

Query: 1   MAMAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDL 60
           MAMAFKMATTGMWV DECKNSFM+MKWKK HRYIVFKIDE S+LVTVDK+GG  EGY+DL
Sbjct: 1   MAMAFKMATTGMWVTDECKNSFMDMKWKKEHRYIVFKIDEGSRLVTVDKLGGPTEGYDDL 60

Query: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG 120
            ASLP DDCRYAVFDFDFVTVDNCRKSKIFFIAW+PTASRIRAK+LYATSKDGLRR LDG
Sbjct: 61  TASLPTDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKDGLRRALDG 120

Query: 121 IHYEVQATDPTEMGFDVIMDRAK 143
           I YE+QATDPTEMGFDVI D AK
Sbjct: 121 ISYELQATDPTEMGFDVIRDIAK 143

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	143
TAIR|locus:2059861	143	ADF5 "actin depolymerizing fac	1.0	1.0	0.853	9.7e-64
TAIR|locus:2131556	141	ADF9 "actin depolymerizing fac	0.986	1.0	0.794	3.4e-61
TAIR|locus:2042546	146	ADF6 "actin depolymerizing fac	0.944	0.924	0.637	1.9e-44
TAIR|locus:2198175	140	ADF11 "actin depolymerizing fa	0.937	0.957	0.589	8.4e-42
TAIR|locus:2127073	140	ADF8 "actin depolymerizing fac	0.937	0.957	0.582	8.4e-42
TAIR|locus:2168063	139	ADF4 "actin depolymerizing fac	0.937	0.964	0.604	1.7e-41
TAIR|locus:2077122	150	ADF1 "actin depolymerizing fac	0.944	0.9	0.592	2.8e-41
TAIR|locus:2168052	139	ADF3 "actin depolymerizing fac	0.944	0.971	0.570	4.2e-40
TAIR|locus:2131879	137	ADF7 "actin depolymerizing fac	0.930	0.970	0.585	5.3e-40
TAIR|locus:2077107	137	ADF2 "actin depolymerizing fac	0.923	0.963	0.582	2.9e-39

TAIR|locus:2059861 ADF5 "actin depolymerizing factor 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
 Identities = 122/143 (85%), Positives = 132/143 (92%)

Query:     1 MAMAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDL 60
             MAMAFKMATTGM V DEC +SFM+MKWKKVHRYIVFKI+EKS+ VTVDKVGGAGE Y DL
Sbjct:     1 MAMAFKMATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDL 60

Query:    61 AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG 120
               SLP DDCRYAVFDFDFVTVDNCRKSKIFFIAW+P AS+IRAK+LYATSKDGLRRVL+G
Sbjct:    61 EDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEG 120

Query:   121 IHYEVQATDPTEMGFDVIMDRAK 143
             IHYE+QATDPTEMGFD+I DRAK
Sbjct:   121 IHYELQATDPTEMGFDIIQDRAK 143

GO:0003779 "actin binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2131556 ADF9 "actin depolymerizing factor 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 112/141 (79%), Positives = 127/141 (90%)

Query:     3 MAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAA 62
             MA K AT+GMW+ D+CK SFMEMKWKKVHRY+V+K++EKS+ VTVDKVG AGE Y+DLAA
Sbjct:     1 MALKTATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAA 60

Query:    63 SLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIH 122
             SLP+DDCRYAVFDFD+VTVDNCR SKIFFI W+P ASRIR KM+YATSK GLRRVLDG+H
Sbjct:    61 SLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVH 120

Query:   123 YEVQATDPTEMGFDVIMDRAK 143
             YE+QATDPTEMGFD I DRAK
Sbjct:   121 YELQATDPTEMGFDKIQDRAK 141

GO:0003779 "actin binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0030041 "actin filament polymerization" evidence=IDA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TAIR|locus:2042546 ADF6 "actin depolymerizing factor 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 86/135 (63%), Positives = 107/135 (79%)

Query:     8 ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDD 67
             A +GM VADE K +F+E++ KK HRY+VFKIDE  K V V+K G   E Y+D  ASLPD+
Sbjct:    11 AISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDN 70

Query:    68 DCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQA 127
             DCRYAV+DFDFVT +NC+KSKIFF AW+P+ S IRAK+LY+TSKD L R L GIHYE+QA
Sbjct:    71 DCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQA 130

Query:   128 TDPTEMGFDVIMDRA 142
             TDPTE+  +V+ +RA
Sbjct:   131 TDPTEVDLEVLRERA 145

GO:0003779 "actin binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2198175 ADF11 "actin depolymerizing factor 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 79/134 (58%), Positives = 106/134 (79%)

Query:     8 ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDD 67
             + +GM V+DECK  F+E+K K+ +R+IVFKIDEK++ V +DK+G   E YED   S+P+D
Sbjct:     4 SASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPED 63

Query:    68 DCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQA 127
             +CRYAV+D+DF T +NC+KSKIFFIAW+P  SR+R+KMLYA+SKD  +R LDGI  E+QA
Sbjct:    64 ECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQA 123

Query:   128 TDPTEMGFDVIMDR 141
             TDP+EM  D+I  R
Sbjct:   124 TDPSEMSLDIIKGR 137

GO:0003779 "actin binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010054 "trichoblast differentiation" evidence=RCA

TAIR|locus:2127073 ADF8 "actin depolymerizing factor 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 78/134 (58%), Positives = 106/134 (79%)

Query:     8 ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDD 67
             + +GM V DECK  F+E+K K+ +R+IVFKIDEK++ V ++K+G   E Y+D  +S+PDD
Sbjct:     4 SASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDD 63

Query:    68 DCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQA 127
             +CRYAV+DFDF T DNC+KSKIFFIAW+P  SR+R+KMLYA+SKD  +R ++GI  E+QA
Sbjct:    64 ECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQA 123

Query:   128 TDPTEMGFDVIMDR 141
             TDP+EM  D+I  R
Sbjct:   124 TDPSEMSLDIIKGR 137

GO:0003779 "actin binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010054 "trichoblast differentiation" evidence=RCA

TAIR|locus:2168063 ADF4 "actin depolymerizing factor 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 81/134 (60%), Positives = 104/134 (77%)

Query:     8 ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDD 67
             A +GM V D+CK  F+E+K K+ HR+IV+KI+EK K V V+KVG     YED AASLP D
Sbjct:     4 AASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPAD 63

Query:    68 DCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQA 127
             +CRYA++DFDFVT +NC+KSKIFFIAW P  +++R+KM+YA+SKD  +R LDGI  E+QA
Sbjct:    64 ECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQA 123

Query:   128 TDPTEMGFDVIMDR 141
             TDPTEM  DV+  R
Sbjct:   124 TDPTEMDLDVLKSR 137

GO:0003779 "actin binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0009870 "defense response signaling pathway, resistance gene-dependent" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

TAIR|locus:2077122 ADF1 "actin depolymerizing factor 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 80/135 (59%), Positives = 104/135 (77%)

Query:     8 ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDD 67
             A +GM V D+CK  F+E+K K+ HR+IV+KI+EK K V V+KVG   + YE+ AA LP D
Sbjct:    15 AASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPAD 74

Query:    68 DCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQA 127
             +CRYA++DFDFVT +NC+KSKIFFIAW P  +++R+KM+YA+SKD  +R LDGI  E+QA
Sbjct:    75 ECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQA 134

Query:   128 TDPTEMGFDVIMDRA 142
             TDPTEM  DV   RA
Sbjct:   135 TDPTEMDLDVFRSRA 149

GO:0003779 "actin binding" evidence=IEA;TAS

GO:0005622 "intracellular" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0009507 "chloroplast" evidence=ISM

GO:0007015 "actin filament organization" evidence=IMP

GO:0030042 "actin filament depolymerization" evidence=IDA

TAIR|locus:2168052 ADF3 "actin depolymerizing factor 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 77/135 (57%), Positives = 104/135 (77%)

Query:     8 ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDD 67
             A +GM V D+CK  FME+K K+ HR+I++KI+E  K V V+K+G  G+ +EDLAASLP D
Sbjct:     4 AASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLPAD 63

Query:    68 DCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQA 127
             +CRYA+FDFDFV+ +   +S+IFF+AW+P  +R+R+KM+YA+SKD  +R LDGI  E+QA
Sbjct:    64 ECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQA 123

Query:   128 TDPTEMGFDVIMDRA 142
             TDPTEM  DV   RA
Sbjct:   124 TDPTEMDLDVFKSRA 138

GO:0003779 "actin binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005739 "mitochondrion" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP;RCA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

TAIR|locus:2131879 ADF7 "actin depolymerizing factor 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 79/135 (58%), Positives = 105/135 (77%)

Query:     8 ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDD 67
             A +GM V DECK  F+E+K K+ +R+I+F+ID +   V V+K+G   E Y+D  ASLP +
Sbjct:     4 AASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQ--VVVEKLGNPDETYDDFTASLPAN 61

Query:    68 DCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQA 127
             +CRYAVFDFDF+T +NC+KSKIFFIAW+P +SR+R KM+YA+SKD  +R LDGI  E+QA
Sbjct:    62 ECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQA 121

Query:   128 TDPTEMGFDVIMDRA 142
             TDP+EM FD+I  RA
Sbjct:   122 TDPSEMSFDIIKSRA 136

GO:0003779 "actin binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005884 "actin filament" evidence=IDA

TAIR|locus:2077107 ADF2 "actin depolymerizing factor 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
 Identities = 78/134 (58%), Positives = 101/134 (75%)

Query:     8 ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDD 67
             A +GM V D+CK  FME+K K+  R IV+KI++K   V V+K+G   + Y+D AASLP D
Sbjct:     4 AASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQ--VIVEKLGEPEQSYDDFAASLPAD 61

Query:    68 DCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQA 127
             DCRY ++DFDFVT +NC+KSKIFFIAW+P  +++R KM+YA+SKD  +R LDGI  E+QA
Sbjct:    62 DCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQA 121

Query:   128 TDPTEMGFDVIMDR 141
             TDPTEMG DV   R
Sbjct:   122 TDPTEMGLDVFKSR 135

GO:0003779 "actin binding" evidence=IEA

GO:0005622 "intracellular" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P0CM06	COFI_CRYNJ	No assigned EC number	0.3481	0.9300	0.9637	yes	no
Q9FVI2	ADF1_PETHY	No assigned EC number	0.6148	0.9440	0.9712	N/A	no
Q9FVI1	ADF2_PETHY	No assigned EC number	0.5777	0.9440	0.9440	N/A	no
P0DJ27	COFB_DICDI	No assigned EC number	0.344	0.8671	0.9051	yes	no
Q6C0Y0	COFI_YARLI	No assigned EC number	0.3602	0.9370	0.8758	yes	no
Q9HF97	COFI_ZYGRO	No assigned EC number	0.3455	0.9370	0.9370	yes	no
Q03048	COFI_YEAST	No assigned EC number	0.3529	0.9370	0.9370	yes	no
O49606	ADF9_ARATH	No assigned EC number	0.7943	0.9860	1.0	no	no
Q9ZNT3	ADF5_ARATH	No assigned EC number	0.8531	1.0	1.0	yes	no
Q759P0	COFI_ASHGO	No assigned EC number	0.3382	0.9370	0.9370	yes	no
P30175	ADF_LILLO	No assigned EC number	0.5851	0.9440	0.9712	N/A	no
P30174	ADF_BRANA	No assigned EC number	0.5905	0.8671	0.9841	N/A	no
P45594	CADF_DROME	No assigned EC number	0.3333	0.9160	0.8851	yes	no
P0DJ26	COFA_DICDI	No assigned EC number	0.344	0.8671	0.9051	yes	no
Q4I963	COFI_GIBZE	No assigned EC number	0.3356	0.9160	0.8562	yes	no
P78929	COFI_SCHPO	No assigned EC number	0.3676	0.9370	0.9781	yes	no
Q6BWX4	COFI_DEBHA	No assigned EC number	0.3382	0.9370	0.9370	yes	no
Q43694	ADF2_MAIZE	No assigned EC number	0.5147	0.9510	0.9784	N/A	no
Q6CQ22	COFI_KLULA	No assigned EC number	0.3602	0.9370	0.9370	yes	no
Q10P87	ADF5_ORYSJ	No assigned EC number	0.7832	1.0	1.0	yes	no
Q6FV81	COFI_CANGA	No assigned EC number	0.3308	0.9370	0.9370	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_IV1110 SubName- Full=Putative uncharacterized protein; (143 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	143
PLN03216	141	PLN03216, PLN03216, actin depolymerizing factor; P	1e-100
cd11286	133	cd11286, ADF_cofilin_like, Cofilin, Destrin, and r	6e-60
smart00102	127	smart00102, ADF, Actin depolymerisation factor/cof	5e-49
pfam00241	127	pfam00241, Cofilin_ADF, Cofilin/tropomyosin-type a	2e-45
cd00013	97	cd00013, ADF_gelsolin, Actin depolymerization fact	4e-19
PTZ00152	122	PTZ00152, PTZ00152, cofilin/actin-depolymerizing f	1e-16
cd11284	132	cd11284, ADF_Twf-C_like, C-terminal ADF domain of	4e-12
cd11283	122	cd11283, ADF_GMF-beta_like, ADF-homology domain of	2e-11
cd11285	139	cd11285, ADF_Twf-N_like, N-terminal ADF domain of	3e-08
cd11282	114	cd11282, ADF_coactosin_like, Coactosin-like member	4e-06

>gnl|CDD|178755 PLN03216, PLN03216, actin depolymerizing factor; Provisional

 Score =  282 bits (722), Expect = e-100
 Identities = 129/141 (91%), Positives = 134/141 (95%)

Query: 3   MAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAA 62
           MAFKMATTGMWV DECKNSFMEMKWKKVHRYIVFKIDEKS+ VTVDKVGG GE Y+DLAA
Sbjct: 1   MAFKMATTGMWVTDECKNSFMEMKWKKVHRYIVFKIDEKSRKVTVDKVGGPGESYDDLAA 60

Query: 63  SLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIH 122
           SLP DDCRYAVFDFDFVTVDNCRKSKIFFIAW+P ASRIRAKMLYATSKDGLRRVLDG+H
Sbjct: 61  SLPTDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASRIRAKMLYATSKDGLRRVLDGVH 120

Query: 123 YEVQATDPTEMGFDVIMDRAK 143
           YE+QATDPTEMGFDVI DRAK
Sbjct: 121 YELQATDPTEMGFDVIRDRAK 141

Length = 141

>gnl|CDD|200442 cd11286, ADF_cofilin_like, Cofilin, Destrin, and related actin depolymerizing factors

 Score =  180 bits (460), Expect = 6e-60
 Identities = 60/133 (45%), Positives = 95/133 (71%)

Query: 10  TGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDC 69
           +G+ V+DEC  +F E+K KK H+YI+FKI +  K + V+KVG     Y+D    LP+++C
Sbjct: 1   SGVKVSDECITAFNELKLKKKHKYIIFKISDDKKEIVVEKVGERDASYDDFLEKLPENEC 60

Query: 70  RYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATD 129
           RYAV+DF++ T D  ++SK+ FI+W P  + I++KMLYA+SKD L++ L+GI  E+QATD
Sbjct: 61  RYAVYDFEYETKDGGKRSKLVFISWCPDTAPIKSKMLYASSKDALKKKLNGIKKEIQATD 120

Query: 130 PTEMGFDVIMDRA 142
            +E+  + I+++ 
Sbjct: 121 LSELSEEEILEKL 133

Actin depolymerization factor/cofilin-like domains (ADF domains) are present in a family of essential eukaryotic actin regulatory proteins. These proteins enhance the turnover rate of actin, and interact with actin monomers (G-actin) as well as actin filaments (F-actin), typically with a preference for ADP-G-actin subunits. The basic function of cofilin is to promote disassembly of aged actin filaments. Vertebrates have three isoforms of cofilin: cofilin-1 (Cfl1, non-muscle cofilin), cofilin-2 (muscle cofilin), and ADF (destrin). When bound to actin monomers, cofilins inhibit their spontaneous exchange of nucleotides. The cooperative binding to (aged) ADP-F-actin induces a local change in the actin filament structure and further promotes aging. Length = 133

>gnl|CDD|214516 smart00102, ADF, Actin depolymerisation factor/cofilin -like domains

 Score =  153 bits (388), Expect = 5e-49
 Identities = 53/128 (41%), Positives = 89/128 (69%), Gaps = 1/128 (0%)

Query: 16  DECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFD 75
           ++CK +F E+K K+ H  I+FKID+ ++ + V++VG   + Y++    LP+D+CRYA++D
Sbjct: 1   EDCKEAFNELKKKRKHSAIIFKIDKDNEEIVVEEVGSTEDSYDEFVEELPEDECRYALYD 60

Query: 76  FDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGF 135
           + F T +  +KSKI FI W+P  + +++KMLYA+SKD L++ L GI  EVQATD  ++  
Sbjct: 61  YKFTT-EESKKSKIVFIFWSPDGAPVKSKMLYASSKDTLKKELGGIQVEVQATDEDDLDE 119

Query: 136 DVIMDRAK 143
           + + ++ K
Sbjct: 120 EALKEKLK 127

Severs actin filaments and binds to actin monomers. Length = 127

>gnl|CDD|143992 pfam00241, Cofilin_ADF, Cofilin/tropomyosin-type actin-binding protein

 Score =  143 bits (363), Expect = 2e-45
 Identities = 55/128 (42%), Positives = 87/128 (67%), Gaps = 1/128 (0%)

Query: 16  DECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFD 75
           D  K SF E+K +K H YI+FKID+    + V++VG  G+ Y++    LP+ +CRYAV+D
Sbjct: 1   DNLKASFNELKKRKKHNYIIFKIDKDKDQIVVEQVGDTGDSYDEFVEELPERECRYAVYD 60

Query: 76  FDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGF 135
            ++ T D  +KSKI F++W+P  + +++KMLYA+SKD L+R L GI  EVQATD  ++  
Sbjct: 61  VEY-TTDGSKKSKIVFVSWSPDGAPVKSKMLYASSKDALKRALGGIQVEVQATDADDLSE 119

Query: 136 DVIMDRAK 143
           + ++++  
Sbjct: 120 EELLEKLS 127

Severs actin filaments and binds to actin monomers. Length = 127

>gnl|CDD|200435 cd00013, ADF_gelsolin, Actin depolymerization factor/cofilin- and gelsolin-like domains

 Score = 76.0 bits (187), Expect = 4e-19
 Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 5/99 (5%)

Query: 32  RYIVFKIDEKSKLVTVDKVGGAGEGYED-LAASLPDDDCRYAVFDFDFVTVDNCRKSKIF 90
            +++FK+D K + +    VG  G G+ D     LP+DD RYA + F +   D+ R SK  
Sbjct: 1   DWVLFKVDAKKEEI---VVGSTGAGFLDEFLEELPEDDPRYAFYRFKYPHSDDKR-SKFV 56

Query: 91  FIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATD 129
           FI+W P    I+ KM+YAT+K  L+  L G+   VQ  D
Sbjct: 57  FISWIPDGVSIKQKMVYATNKQTLKEALFGLAVPVQIRD 95

Actin depolymerization factor/cofilin-like domains are present in a family of essential eukaryotic actin regulatory proteins; these proteins enhance the turnover rate of actin and interact with actin monomers as well as actin filaments. Length = 97

>gnl|CDD|173441 PTZ00152, PTZ00152, cofilin/actin-depolymerizing factor 1-like protein; Provisional

 Score = 70.4 bits (172), Expect = 1e-16
 Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 15/115 (13%)

Query: 10  TGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDD- 68
           +G+ V D C   F  MK +K  R+I+F I E  +++   K  GA     +L  S+  +D 
Sbjct: 3   SGIRVNDNCVTEFNNMKIRKTCRWIIFVI-ENCEIIIHSK--GATTTLTELVGSIDKNDK 59

Query: 69  --CRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGI 121
             C Y VFD           +KI F  +A  +S  R +M YA+SK  L + ++G+
Sbjct: 60  IQCAYVVFD---------AVNKIHFFMYARESSNSRDRMTYASSKQALLKKIEGV 105

Length = 122

>gnl|CDD|200440 cd11284, ADF_Twf-C_like, C-terminal ADF domain of twinfilin and related proteins

 Score = 59.2 bits (144), Expect = 4e-12
 Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 25/146 (17%)

Query: 3   MAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKID---EKSKLVTVDKVGGAGEGYED 59
           +AF ++       +E K++  E+    V+  +   ID   E  +LV+   +       +D
Sbjct: 3   VAFPVS-------EEAKDALSELASGGVN-LVQLSIDLENETIELVSSSSISIP----DD 50

Query: 60  LAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLD 119
           L++ +P D  RY  + +      +   S + FI   P+ S+++ +MLYA+SK GL    +
Sbjct: 51  LSSLIPSDHPRYHFYRYP-----HTYLSSVVFIYSCPSGSKVKERMLYASSKSGLLNHAE 105

Query: 120 G-----IHYEVQATDPTEMGFDVIMD 140
                 I  +++  DP E+    + D
Sbjct: 106 DEGKIEIDKKIEIGDPDELTESFLSD 131

Actin depolymerization factor/cofilin-like domains (ADF domains) are present in a family of essential eukaryotic actin regulatory proteins. Twinfilin contains two ADF domains, and inhibits the assembly of actin filaments by strongly interacting with monomeric ADP-actin (ADP-G-actin) in a 1:1 stochiometry (with it's C-terminal ADF domain, Twf-C) and inhibiting the actin monomer's nucleotide exchange. Mammalian twinfilin may also cap the barbed ends of F-actin filaments and prevent further assembly (or disassembly), in a process which requires both ADF domains. The N-terminal ADF domain (Twf-N) binds G-actin with a lower affinity than Twf-C; Twf-C can also bind F-actin. During capping, Twf-N may interact with the terminal actin subunit, and Twf-C may bind between two adjacent subunits at the side of the filament. Length = 132

>gnl|CDD|200439 cd11283, ADF_GMF-beta_like, ADF-homology domain of glia maturation factor beta and related proteins

 Score = 56.9 bits (138), Expect = 2e-11
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 3/87 (3%)

Query: 34  IVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKS-KIFFI 92
           ++ KID++ + + VD+        E+LA  LP+   R+ ++ +     D  R S  +  I
Sbjct: 24  LILKIDKEKQEIVVDEEL-EDISIEELAEELPEHSPRFVLYSYKMKHDDG-RISYPLVLI 81

Query: 93  AWAPTASRIRAKMLYATSKDGLRRVLD 119
            W+P       +MLYA +K+ L +  +
Sbjct: 82  YWSPQGCSPELQMLYAGAKELLVKEAE 108

Actin depolymerization factor/cofilin-like domains (ADF domains) are present in a family of essential eukaryotic actin regulatory proteins. Most of these proteins enhance the turnover rate of actin and interact with actin monomers as well as actin filaments. The glia maturation factor (GMF), however, does not bind actin but interacts with the Arp2/3 complex (which contains actin-related proteins, amongst others) and suppresses Arp2/3 activity, inducing the dissociation of branched daughter filaments from their mother filaments. This family includes both mammalian GMF isoforms, GMF-beta and GMF-gamma. GMF-beta regulates cellular growth, fission, differentiation and apoptosis. GMF-gamma is important in myeloid cell development and is an important regulator for cell migration and polarity in neutrophils. Length = 122

>gnl|CDD|200441 cd11285, ADF_Twf-N_like, N-terminal ADF domain of twinfilin and related proteins

 Score = 48.8 bits (117), Expect = 3e-08
 Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 11/130 (8%)

Query: 10  TGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAA----SLP 65
           +G+  ++E  ++F   K     R I   I E  +LV    +   G   +D        L 
Sbjct: 2   SGITASEELLDAFKSAKSSGSVRAIKITI-ENEELVPDATIETTGSWEQDFDLLVLPLLE 60

Query: 66  DDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIH--Y 123
           + +  Y ++  D          +  FI++ P ++ +R KMLYA+++  L+R L   H   
Sbjct: 61  EKEPCYILYRLD----SKSAGYEWVFISFVPDSAPVRQKMLYASTRATLKRELGSNHIKD 116

Query: 124 EVQATDPTEM 133
           E+ AT+  E+
Sbjct: 117 ELFATELEEL 126

Actin depolymerization factor/cofilin-like domains (ADF domains) are present in a family of essential eukaryotic actin regulatory proteins. Twinfilin contains two ADF domains, and inhibits the assembly of actin filaments by strongly interacting with monomeric ADP-actin (ADP-G-actin) in a 1:1 stochiometry (with it's C-terminal ADF domain, Twf-C) and inhibiting the actin monomer's nucleotide exchange. Mammalian twinfilin may also cap the barbed ends of F-actin filaments and prevent further assembly (or disassembly), in a process which requires both ADF domains. The N-terminal ADF domain (Twf-N) binds G-actin with a lower affinity than Twf-C; Twf-C can also bind F-actin. During capping, Twf-N may interact with the terminal actin subunit, and Twf-C may bind between two adjacent subunits at the side of the filament. Length = 139

>gnl|CDD|200438 cd11282, ADF_coactosin_like, Coactosin-like members of the ADF homology domain family

 Score = 43.0 bits (102), Expect = 4e-06
 Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 6/102 (5%)

Query: 33  YIVFKIDEKSKLVTVDKVGGAGEGY-EDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFF 91
           +++   +  + LV    + G+G G  ++L A LPDD+  +             ++SK  F
Sbjct: 18  WVLLGYESSNTLV----LRGSGSGGIDELKAQLPDDEVLFGYVRITL-GDGESKRSKFVF 72

Query: 92  IAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEM 133
           I W      +  +   +  K  ++ VL   H E+ A+   E+
Sbjct: 73  ITWIGENVSVLRRAKVSVHKGDVKEVLSPFHVELTASSKDEL 114

Actin depolymerization factor/cofilin-like domains (ADF domains) are present in a family of essential eukaryotic actin regulatory proteins. Many of these proteins enhance the turnover rate of actin and interact with actin monomers as well as actin filaments. The function of coactosins is not well understood. They appear to interfere with the capping of actin filaments in Dictyostelium, and may not be able to bind monomeric globular actin. A role for coactosins as chaperones stabilizing 5-lipoxygenase (5LO) has been suggested; 5LO plays a crucial role in leukotriene synthesis. Length = 114

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	143
PLN03216	141	actin depolymerizing factor; Provisional	100.0
cd00013	132	ADF Actin depolymerisation factor/cofilin -like do	100.0
KOG1735	146	consensus Actin depolymerizing factor [Cytoskeleto	100.0
PF00241	127	Cofilin_ADF: Cofilin/tropomyosin-type actin-bindin	100.0
smart00102	127	ADF Actin depolymerisation factor/cofilin -like do	100.0
PTZ00152	122	cofilin/actin-depolymerizing factor 1-like protein	100.0
KOG1736	143	consensus Glia maturation factor beta [Extracellul	99.94
KOG1747	342	consensus Protein tyrosine kinase 9/actin monomer-	99.93
KOG1747	342	consensus Protein tyrosine kinase 9/actin monomer-	99.9
KOG3655	484	consensus Drebrins and related actin binding prote	99.8

>PLN03216 actin depolymerizing factor; Provisional

Probab=100.00  E-value=6.4e-49  Score=279.05  Aligned_cols=141  Identities=91%  Similarity=1.450  Sum_probs=133.8

Q ss_pred             ccccccccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecC
Q 032333            3 MAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVD   82 (143)
Q Consensus         3 ~~~~m~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~   82 (143)
                      |+|.|++|||+++++|.++|++||.++.+|||+|+|+.++++|+|++++..+.+|+||.+.||+++|||++||+++.+++
T Consensus         1 ~~~~m~~SGi~v~~~c~~~f~~lk~~k~~r~iifkI~~~~~~ivv~~~~~~~~~~~d~~~~L~~~~~rY~vyd~~~~~~~   80 (141)
T PLN03216          1 MAFKMATTGMWVTDECKNSFMEMKWKKVHRYIVFKIDEKSRKVTVDKVGGPGESYDDLAASLPTDDCRYAVFDFDFVTVD   80 (141)
T ss_pred             CcceecCCCCeeCHHHHHHHHHHHhCCCceEEEEEEcCCCCEEEEEecCCCCCCHHHHHHhCCCCCCeEEEEEeEeccCC
Confidence            67889999999999999999999988778999999999888999998765567899999999999999999999999999


Q ss_pred             CceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333           83 NCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK  143 (143)
Q Consensus        83 ~~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~  143 (143)
                      |+.++||+||+|||++|++|+||+|||+|++|++.|+|++.+|||+|.+||+++.+.++|+
T Consensus        81 g~~~~klvFI~w~Pd~a~vk~KMlYAssK~~lk~~l~gi~~~iqatd~~el~~~~~~~~~~  141 (141)
T PLN03216         81 NCRKSKIFFIAWSPEASRIRAKMLYATSKDGLRRVLDGVHYELQATDPTEMGFDVIRDRAK  141 (141)
T ss_pred             CCcccCEEEEEECCCCCCHHHHHHHHHHHHHHHHHhcCCeEEEEECChHhcCHHHHHHHhC
Confidence            9999999999999999999999999999999999999999999999999999999999974

>cd00013 ADF Actin depolymerisation factor/cofilin -like domains; present in a family of essential eukaryotic actin regulatory proteins; these proteins enhance the turnover rate of actin and interact with actin monomers as well as actin filaments

Probab=100.00  E-value=2.6e-40  Score=231.81  Aligned_cols=132  Identities=46%  Similarity=0.891  Sum_probs=124.1

Q ss_pred             cCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeeeE
Q 032333           10 TGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKI   89 (143)
Q Consensus        10 sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~   89 (143)
                      ||++++++|.++|++++.+++++|++|+|+.++++|+++++++.+.++++|.+.||+++|||++||+++.+. |+.++|+
T Consensus         1 sgi~i~~e~~~a~~~~~~~~~~~~vi~~i~~~~~~i~~~~~~~~~~~~~~l~~~l~~~~~~y~~~~~~~~~~-~~~~~k~   79 (132)
T cd00013           1 SGIKVSDECKEAFEELKSGKKTRWIIFKIDDDKKEIVVEKTGEGGESFDEFVEELPEDECRYALYDYDFTTE-GSKKSKI   79 (132)
T ss_pred             CCceECHHHHHHHHHHHhCCceeEEEEEEcCCCCEEEEEecCCCCCCHHHHHHhCCcCCceEEEEEecccCC-CccccCE
Confidence            799999999999999998867999999999988899999988744589999999999999999999998765 7899999


Q ss_pred             EEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhh
Q 032333           90 FFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRA  142 (143)
Q Consensus        90 vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~  142 (143)
                      +||+|||++|++|+||+|||++.+|++.++|+++.+++++.+||+++.|.+||
T Consensus        80 vfI~w~P~~a~~k~km~yas~k~~l~~~l~~~~~~i~a~~~~dl~~~~i~~kl  132 (132)
T cd00013          80 VFIYWSPETAPVKSKMLYASSKAALKRELVGIQVEVQATDPDELDEEALLEKL  132 (132)
T ss_pred             EEEEECCCCCChhhhhhhHHHHHHHHHhcCCceEEEEECChhhcCHHHHHhhC
Confidence            99999999999999999999999999999999999999999999999999886

>KOG1735 consensus Actin depolymerizing factor [Cytoskeleton]

Probab=100.00  E-value=1.5e-40  Score=233.58  Aligned_cols=135  Identities=53%  Similarity=0.973  Sum_probs=128.0

Q ss_pred             cccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCC---CCCceEEEEeeeeeecC--
Q 032333            8 ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLP---DDDCRYAVFDFDFVTVD--   82 (143)
Q Consensus         8 ~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~---~~~pry~~y~~~~~~~~--   82 (143)
                      ++||+.++|+|+..|++|+.++.+|+++|+|+.++.+|++++.|+++.+|++|...||   .++|||++||++|.+..  
T Consensus         1 ~aSGv~Vsde~~~~F~elk~kk~~r~ivF~i~~~~~~i~ve~~g~~~~s~~~f~~~l~~~~~~dCrYA~yDf~f~t~~~g   80 (146)
T KOG1735|consen    1 MASGVAVSDECKKVFNELKVKKRKRYVVFKISEDKKQIIVEKGGSPGASYDDFVASLPKMPEKDCRYALYDFEFETKESG   80 (146)
T ss_pred             CCcceEecHHHHHHHHHHHhhcceeEEEEEeccccccccccccCCCCCchhhhHHHhccCCccccceEEecceEEeeccc
Confidence            4799999999999999999988899999999998889999998988999999999999   99999999999998844  


Q ss_pred             CceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhh
Q 032333           83 NCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRA  142 (143)
Q Consensus        83 ~~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~  142 (143)
                      ++.++|++||.|||++||+|.||+|||++++|++.|.|+++++||||++|++++.|+++|
T Consensus        81 ~~~~~Ki~f~~wsPd~a~vKsKMiYaSSkDalkr~L~Gi~~elQatd~~E~~~~~~~ekl  140 (146)
T KOG1735|consen   81 NCKKSKIFFIAWSPDTAPVKSKMIYASSKDALKRELTGIQHELQATDPSEMSLDSLAEKL  140 (146)
T ss_pred             cceeeeEEEEEECCCccchhhheeehhhHHHHhhhccCceeeeecCChHHhhHHHHHHHh
Confidence            348899999999999999999999999999999999999999999999999999999987

>PF00241 Cofilin_ADF: Cofilin/tropomyosin-type actin-binding protein; InterPro: IPR002108 The actin-depolymerising factor homology (ADF-H) domain is an ~150-amino acid motif that is present in three phylogenetically distinct classes of eukaryotic actin-binding proteins [, , ]: ADF/cofilins, which include ADF, cofilin, destrin, actophorin, coactosin, depactin and glia maturation factors (GMFs) beta and gamma

Probab=100.00  E-value=5.7e-39  Score=223.75  Aligned_cols=127  Identities=42%  Similarity=0.842  Sum_probs=118.9

Q ss_pred             HHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeeeEEEEEEc
Q 032333           16 DECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWA   95 (143)
Q Consensus        16 ~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~vfI~w~   95 (143)
                      |||.++|++++.+++++|++|+|++++++|+|+++|+...+++||.+.||+++|||++||+.++++ |+.++|++||+||
T Consensus         1 ~e~~~~~~~~~~~~~~~~i~~~i~~~~~~i~v~~~g~~~~~~~el~~~l~~~~p~y~~~~~~~~~~-~~~~~k~vfI~w~   79 (127)
T PF00241_consen    1 DECKAAFQELKSKKSTRWIIFKIDDEKEEIVVEKSGSEGGSFDELLSHLPDDEPRYILYRFEYTHK-GSRRSKLVFIYWC   79 (127)
T ss_dssp             HHHHHHHHHHHTTTSCSEEEEEEETTSTEEEEEEEEEESSHHHHHHHCSCTTSEEEEEEEEEEEET-TSEEEEEEEEEEE
T ss_pred             CHHHHHHHHHHcCCCceEEEEEEeCCCcEEEEEeccCCCCCHHHHHHhcccCCcEEEEEEeeeccc-CCCCceEEEEEEe
Confidence            689999999999977999999999998899999988556799999999999999999999999876 7899999999999


Q ss_pred             CCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333           96 PTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK  143 (143)
Q Consensus        96 P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~  143 (143)
                      |++||+|+||+|||++.+|++.|++++.+++++|++||+++.|.+||+
T Consensus        80 P~~~~vk~km~yas~k~~l~~~l~~~~~~~~~~d~~dl~~~~i~~kl~  127 (127)
T PF00241_consen   80 PDNAPVKEKMLYASSKASLKKKLGGIHIEIQASDPDDLSEEEILEKLK  127 (127)
T ss_dssp             STTS-HHHHHHHHHHHHHHHHHCTTEEEEEEESSGGGGSHHHHHHHH-
T ss_pred             cCCccHHHhhhhHHhHHHHHHHhCCceEEEEECChHHCCHHHHHHhhC
Confidence            999999999999999999999999999999999999999999999985

ADF/cofilins are small actin-binding proteins composed of a single ADF-H domain. They bind both actin-monomers and filaments and promote rapid filament turnover in cells by depolymerising/fragmenting actin filaments. ADF/cofilins bind ADP-actin with higher affinity than ATP-actin and inhibit the spontaneous nucleotide exchange on actin monomers Twinfilins, which are actin monomer-binding proteins that are composed of two ADF-H domains Abp1/Drebrins, which are relatively large proteins composed of an N-terminal ADF-H domain followed by a variable region and a C-terminal SH3 domain. Abp1/Drebrins interact only with actin filaments and do not promote filament depolymerisation or fragmentation Although these proteins are biochemically distinct and play different roles in actin dynamics, they all appear to use the ADF-H domain for their interactions with actin. The ADF-H domain consists of a six-stranded mixed beta-sheet in which the four central strands (beta2-beta5) are anti-parallel and the two edge strands (beta1 and beta6) run parallel with the neighbouring strands. The sheet is surrounded by two alpha-helices on each side [, , ].; GO: 0003779 actin binding, 0005622 intracellular; PDB: 1AK6_A 1AK7_A 1V6F_A 2L72_A 1CFY_A 1QPV_A 1COF_A 1TVJ_A 1X67_A 3L50_A ....

>smart00102 ADF Actin depolymerisation factor/cofilin -like domains

Probab=100.00  E-value=1.4e-37  Score=217.12  Aligned_cols=127  Identities=42%  Similarity=0.845  Sum_probs=118.2

Q ss_pred             HHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeeeEEEEEEc
Q 032333           16 DECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWA   95 (143)
Q Consensus        16 ~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~vfI~w~   95 (143)
                      ++|.++|++|+.+++.+|++|+|+.++++|+|+++|..+.+|+||.+.||+++|||++||++++++ ++++++++||+||
T Consensus         1 ~~~~~~~~~~~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~el~~~l~~~~~ry~~~~~~~~~~-~~~~~k~vfI~w~   79 (127)
T smart00102        1 EDCKEAFNELKKKRKHSAIIFKIDKDNEEIVVEEVGSTEDSYDEFVEELPEDECRYALYDYKFTTE-ESKKSKIVFIFWS   79 (127)
T ss_pred             ChHHHHHHHHHcCCCceEEEEEEecCCCEEEEEecCCCCCCHHHHHHhCCccCceEEEEEeecccC-CCccccEEEEEEC
Confidence            479999999998877999999999988899999887656789999999999999999999998765 5688999999999


Q ss_pred             CCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333           96 PTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK  143 (143)
Q Consensus        96 P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~  143 (143)
                      |++|++|.||+|||++.+|++.|+|++..|++++.+||+++.|.++++
T Consensus        80 P~~a~~~~km~yas~k~~l~~~l~~~~~~i~~~~~~el~~~~i~~kl~  127 (127)
T smart00102       80 PDGAPVKSKMLYASSKDTLKKELGGIQVEVQATDEDDLDEEALKEKLK  127 (127)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHcCCceEEEEECChhhcCHHHHHHHhC
Confidence            999999999999999999999999999999999999999999999974

Severs actin filaments and binds to actin monomers.

>PTZ00152 cofilin/actin-depolymerizing factor 1-like protein; Provisional

Probab=100.00  E-value=1e-35  Score=206.10  Aligned_cols=114  Identities=30%  Similarity=0.567  Sum_probs=100.6

Q ss_pred             cccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCC---ceEEEEeeeeeecCCc
Q 032333            8 ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDD---CRYAVFDFDFVTVDNC   84 (143)
Q Consensus         8 ~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~---pry~~y~~~~~~~~~~   84 (143)
                      ++|||+++++|.++|++|+.++.+|||+|+|++  ++|+|++.++ ..+|++|.+.||+++   |||++|+++       
T Consensus         1 m~SGi~v~de~~~~f~~lk~~k~~r~iifkI~~--~~Ivv~~~~~-~~~~~e~~~~L~~~~~~~crY~vyd~~-------   70 (122)
T PTZ00152          1 MISGIRVNDNCVTEFNNMKIRKTCRWIIFVIEN--CEIIIHSKGA-TTTLTELVGSIDKNDKIQCAYVVFDAV-------   70 (122)
T ss_pred             CCCCcCcCHHHHHHHHHHhcCCcceEEEEEEcC--cEEEEEecCC-CCCHHHHHHhccccCCCCceEEEEccC-------
Confidence            479999999999999999998779999999975  5899998887 468999999999988   999999874       


Q ss_pred             eeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeE-EEEeCCCCCC
Q 032333           85 RKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHY-EVQATDPTEM  133 (143)
Q Consensus        85 ~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~-~i~~~d~~dl  133 (143)
                        ++++||+|||++|++|.||+|||||.+|++.|.|+++ ..++++.+|+
T Consensus        71 --~klvFI~w~Pd~a~ik~KMlYASsK~~l~~~l~Gi~~~~~~~~~~~~~  118 (122)
T PTZ00152         71 --NKIHFFMYARESSNSRDRMTYASSKQALLKKIEGVNVLTSVIESAQDV  118 (122)
T ss_pred             --CCEEEEEECCCCCChHHhhhhHhHHHHHHHHhcchhHHHHHHHHhhhh
Confidence              4799999999999999999999999999999998753 4566666655

>KOG1736 consensus Glia maturation factor beta [Extracellular structures]

Probab=99.94  E-value=8.7e-26  Score=153.55  Aligned_cols=130  Identities=19%  Similarity=0.373  Sum_probs=118.7

Q ss_pred             ceeCHHHHHHHHHhhcc-C--ceeEEEEEEeCCCcEEEEee-cCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceee
Q 032333           12 MWVADECKNSFMEMKWK-K--VHRYIVFKIDEKSKLVTVDK-VGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKS   87 (143)
Q Consensus        12 i~is~e~~~a~~~lk~~-~--~~~~ii~~i~~~~~~i~l~~-~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~   87 (143)
                      .+|+++..+.+++++-+ +  ...++|++|+.+...|+++. ..+ ..+.+|+.+.||+..|||++|.|+++++||+..+
T Consensus         8 ~~i~~et~~ki~kFR~r~k~t~~~A~imKidK~~~eiV~d~Eeld-~is~eEladeLpe~~PRFvl~sYpt~t~DGr~st   86 (143)
T KOG1736|consen    8 CKIGTETREKIRKFRFRTKETSNAAIIMKIDKDSYEIVLDEEELD-EISPEELADELPERQPRFVLYSYPTTTDDGRVST   86 (143)
T ss_pred             EEeCHHHHHHHHHhhhhhccccceeEEEEecCCceEeecCHHHhc-cCChHHHHhhccccCCcEEEEECcccccCCcccc
Confidence            57899999999999875 2  57889999999988999984 343 5788899999999999999999999999999999


Q ss_pred             eEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333           88 KIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK  143 (143)
Q Consensus        88 k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~  143 (143)
                      +++||||.|.+|+.-++|+||++|.-+.+.. ++++.+++++-+|++.+++.++|.
T Consensus        87 PL~~Iyw~P~~~~~e~~MmYAgak~~~~~~~-~~~KvfEir~tdD~t~e~l~E~L~  141 (143)
T KOG1736|consen   87 PLCFIYWSPVGCKPEQQMMYAGAKNMLVQTA-ELTKVFEIRSTDDLTEEWLREKLE  141 (143)
T ss_pred             cEEEEEecCccCCHHHHHHHHHHHHHHHHHh-hheEEEEecccccccHHHHHHHhh
Confidence            9999999999999999999999999999887 678999999999999999999874

>KOG1747 consensus Protein tyrosine kinase 9/actin monomer-binding protein [Extracellular structures]

Probab=99.93  E-value=4.5e-26  Score=175.74  Aligned_cols=127  Identities=24%  Similarity=0.413  Sum_probs=108.4

Q ss_pred             ccccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCC----CCChHHHhhcC-CCCCceEEEEeeeeeec
Q 032333            7 MATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGA----GEGYEDLAASL-PDDDCRYAVFDFDFVTV   81 (143)
Q Consensus         7 m~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~----~~~~~e~~~~l-~~~~pry~~y~~~~~~~   81 (143)
                      .+|+||..++++.+.|++-++++ .|.+...|+++  ++.+..+...    ..+|+.++..| .+.+|||++||.+.   
T Consensus         2 S~QtGI~A~e~l~~~l~~~~~~k-~R~ikIvI~nE--ql~~~s~~e~~~~w~~D~~~~v~~ll~~~ePcyILyrlds---   75 (342)
T KOG1747|consen    2 SHQTGIRATEALKKFLNEAKNGK-LRLIKIVIENE--QLSPGSTSEPSTSWERDYDKLVLPLLDAREPCYILYRLDS---   75 (342)
T ss_pred             CcccccchHHHHHHHHHhcccCc-eEEEEEEEecc--cccCCccccccccHHHHHHHHHHHhhccCCceEEEEeecC---
Confidence            36899999999999999999997 99998888875  7877665544    34567766654 57899999999973   


Q ss_pred             CCceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCC--eeEEEEeCCCCCCCHHHHHhhh
Q 032333           82 DNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG--IHYEVQATDPTEMGFDVIMDRA  142 (143)
Q Consensus        82 ~~~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~g--i~~~i~~~d~~dl~~~~i~~k~  142 (143)
                         +..+|+||.|+||+||||+||||||||++|++++++  +..+.++++++||+...+.+.+
T Consensus        76 ---~~~~w~lIs~vPD~apVR~KMLYAsTrATlkrefG~~~i~ee~~~T~~~dl~~~~~~k~l  135 (342)
T KOG1747|consen   76 ---KNAEWLLISWVPDNAPVRQKMLYASTRATLKREFGGAYITEELFATDLEDLTLLGYFKSL  135 (342)
T ss_pred             ---CCccEEEEEECCCCChHHHHHHHHHHHHHHHHHhccceeccccccCCHHHhhhHHHHHhh
Confidence               344899999999999999999999999999999987  6789999999999999887654

>KOG1747 consensus Protein tyrosine kinase 9/actin monomer-binding protein [Extracellular structures]

Probab=99.90  E-value=2.2e-23  Score=160.92  Aligned_cols=131  Identities=21%  Similarity=0.396  Sum_probs=114.9

Q ss_pred             cCce--eCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceee
Q 032333           10 TGMW--VADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKS   87 (143)
Q Consensus        10 sGi~--is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~   87 (143)
                      +|+.  ++++..+|+++|+.++ ++||+|.||..++.|.|..+.+ ..+.+|+...+|.+.|||.+|.|.+++. |....
T Consensus       173 ~Gva~pi~~~a~kAl~~L~~~~-~n~vql~ID~~nE~I~l~~t~~-~~e~sdL~s~vP~d~prY~ff~~~ht~e-GD~~e  249 (342)
T KOG1747|consen  173 QGVAFPIDRNAEKALQDLKSSK-LNYVQLSIDLENETIQLSQTDT-CTEPSDLPSRVPRDGPRYHFFLFKHTHE-GDPLE  249 (342)
T ss_pred             cceeecccHHHHHHHHHHHhhc-cceEEEEeccccceeeeeccCC-CCChHHhhhhcCCCCCceEEEecccccC-CCCce
Confidence            5655  7999999999999987 9999999998888999987765 4679999999999999999999998764 55567


Q ss_pred             eEEEEEEcCC-CCCcchhhhhhhhHHHHHHhcC---C--eeEEEEeCCCCCCCHHHHHhhhC
Q 032333           88 KIFFIAWAPT-ASRIRAKMLYATSKDGLRRVLD---G--IHYEVQATDPTEMGFDVIMDRAK  143 (143)
Q Consensus        88 k~vfI~w~P~-~a~vk~KMlyassk~~l~~~l~---g--i~~~i~~~d~~dl~~~~i~~k~~  143 (143)
                      .++|||.||. +|+||+||+|||+|..|...+.   |  |.++|++.|.+||+++.+.+.++
T Consensus       250 s~~FIYS~P~~~~sVKeRMlYSScK~~fLd~~k~~~gi~i~kKiEi~d~~eLte~~L~e~~H  311 (342)
T KOG1747|consen  250 SIVFIYSMPGYGCSVKERMLYSSCKSGFLDSLKNDLGIVISKKIEIDDGAELTEKFLYEELH  311 (342)
T ss_pred             eEEEEEECCCCCcchhhhhHhhhcchhHHHHHHHhcCeeEEEEEeeCcHHHhhHHHHHHhhC
Confidence            8999999999 9999999999999988866654   3  67899999999999998887654

>KOG3655 consensus Drebrins and related actin binding proteins [Cytoskeleton]

Probab=99.80  E-value=7.4e-19  Score=142.61  Aligned_cols=128  Identities=17%  Similarity=0.258  Sum_probs=114.0

Q ss_pred             CceeCHHHHHHHHHhhccC-ceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeeeE
Q 032333           11 GMWVADECKNSFMEMKWKK-VHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKI   89 (143)
Q Consensus        11 Gi~is~e~~~a~~~lk~~~-~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~   89 (143)
                      +-.=..+++++|+++..+. .+.|+||+++++.+.+.+..++.  .++++|++.+....-.|+++++.   +.++.++||
T Consensus         6 ~~~~~aei~aaY~~v~~d~~dt~WaiF~Yeg~s~~~~~~~s~~--~~~~e~~~df~~~kv~yg~~rv~---D~~s~l~Kf   80 (484)
T KOG3655|consen    6 TTTHGAEIRAAYERVVDDSSDTDWALFTYEGNSNDLKVAGSGE--GGLEEFLGDFDSGKVMYGFCRVK---DPMSGLPKF   80 (484)
T ss_pred             ccccHHHHHHHHHHhhccCCCceeEEEeecCCccceeeecccc--ccHHHHhhhcccCceeEEEEEec---CcccCCcce
Confidence            3334578999999998864 79999999999866666655554  68999999999999999999986   667889999


Q ss_pred             EEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333           90 FFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK  143 (143)
Q Consensus        90 vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~  143 (143)
                      |||.||++++++-+|-.+|++++.+++.|.|+|++|+|++.+||+.+.|.++|+
T Consensus        81 vLI~W~GE~vp~~Rka~~ath~a~v~~~lkg~hV~i~Ar~e~Dld~d~i~~~ls  134 (484)
T KOG3655|consen   81 VLINWIGEGVPVLRKAKCATHKALVKNFLKGFHVEINARSEEDLDEDAIREKLS  134 (484)
T ss_pred             EEEEecCCccHHHhhhhhcchHHHHHHHhhcceEEEeccchhhcCHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	143
1f7s_A	139	Crystal Structure Of Adf1 From Arabidopsis Thaliana		9e-46
1ahq_A	137	Recombinant Actophorin Length = 137		1e-31
1cnu_A	137	Phosphorylated Actophorin From Acantamoeba Polyphag		2e-31
2i2q_A	137	Fission Yeast Cofilin Length = 137		6e-25
1cfy_A	143	Yeast Cofilin, Monoclinic Crystal Form Length = 143		4e-24
1ak6_A	174	Destrin, Nmr, Minimized Average Structure Length =		2e-16
2lj8_A	144	Solution Structure Of AdfCOFILIN FROM TRYPANOSOMA B		3e-15
1q8g_A	166	Nmr Structure Of Human Cofilin Length = 166		1e-14
2xfa_A	148	Crystal Structure Of Plasmodium Berghei Actin Depol		2e-14
2l72_A	139	Solution Structure And Dynamics Of Adf From Toxopla		1e-13
1tvj_A	166	Solution Structure Of Chick Cofilin Length = 166		2e-13
2kvk_A	144	Solution Structure Of AdfCOFILIN (LDCOF) FROM LEISH		2e-11
3q2b_A	124	Crystal Structure Of An Actin Depolymerizing Factor		5e-07
2xf1_A	124	Crystal Structure Of Plasmodium Falciparum Actin De		8e-07
1m4j_A	142	Crystal Structure Of The N-Terminal Adf-H Domain Of		5e-05
1wfs_A	151	Solution Structure Of Glia Maturation Factor-Gamma		5e-04
3l50_A	136	The Crystal Structure Of Human Glia Maturation Fact		5e-04
1vkk_A	154	Crystal Structure Of Glia Maturation Factor-Gamma (		5e-04
2vac_A	134	Structure Of N-Terminal Actin Depolymerizing Factor		7e-04

>pdb|1F7S|A Chain A, Crystal Structure Of Adf1 From Arabidopsis Thaliana Length = 139

Iteration: 1
 Score =  178 bits (452), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 80/135 (59%), Positives = 104/135 (77%)
Query: 8   ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDD 67
           A +GM V D+CK  F+E+K K+ HR+IV+KI+EK K V V+KVG   + YE+ AA LP D
Sbjct: 4   AASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPAD 63
Query: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQA 127
           +CRYA++DFDFVT +NC+KSKIFFIAW P  +++R+KM+YA+SKD  +R LDGI  E+QA
Sbjct: 64  ECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQA 123
Query: 128 TDPTEMGFDVIMDRA 142
           TDPTEM  DV   RA
Sbjct: 124 TDPTEMDLDVFRSRA 138

>pdb|1AHQ|A Chain A, Recombinant Actophorin Length = 137

Iteration: 1
 Score =  131 bits (329), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 59/134 (44%), Positives = 90/134 (67%), Gaps = 1/134 (0%)
Query: 10  TGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDC 69
           +G+ V+D+C   F E+K    HRY+ FK++  +  V V+ VGG    YED  + LP+ DC
Sbjct: 1   SGIAVSDDCVQKFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDC 60
Query: 70  RYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATD 129
           RYA+FD++F  VD  +++KI FI WAP ++ I++KM+Y ++KD +++ L GI  EVQATD
Sbjct: 61  RYAIFDYEF-QVDGGQRNKITFILWAPDSAPIKSKMMYTSTKDSIKKKLVGIQVEVQATD 119
Query: 130 PTEMGFDVIMDRAK 143
             E+  D + +RAK
Sbjct: 120 AAEISEDAVSERAK 133

>pdb|1CNU|A Chain A, Phosphorylated Actophorin From Acantamoeba Polyphaga Length = 137

Iteration: 1
 Score =  130 bits (327), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 59/133 (44%), Positives = 89/133 (66%), Gaps = 1/133 (0%)
Query: 11  GMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCR 70
           G+ V+D+C   F E+K    HRY+ FK++  +  V V+ VGG    YED  + LP+ DCR
Sbjct: 2   GIAVSDDCVQKFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCR 61
Query: 71  YAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDP 130
           YA+FD++F  VD  +++KI FI WAP ++ I++KM+Y ++KD +++ L GI  EVQATD 
Sbjct: 62  YAIFDYEF-QVDGGQRNKITFILWAPDSAPIKSKMMYTSTKDSIKKKLVGIQVEVQATDA 120
Query: 131 TEMGFDVIMDRAK 143
            E+  D + +RAK
Sbjct: 121 AEISEDAVSERAK 133

>pdb|2I2Q|A Chain A, Fission Yeast Cofilin Length = 137

Iteration: 1
 Score =  109 bits (272), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 89/136 (65%), Gaps = 2/136 (1%)
Query: 7   MATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPD 66
           M+ +G+ V+ EC  +F E+K  K  RY+VFK+++    + V+K     + ++     LP+
Sbjct: 1   MSFSGVKVSPECLEAFQELKLGKSLRYVVFKMNDTKTEIVVEK-KSTDKDFDTFLGDLPE 59
Query: 67  DDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQ 126
            DCRYA++DF+F   +  R +KI FI+W+P  + I++KM+Y++SKD LRR   GI  ++Q
Sbjct: 60  KDCRYAIYDFEFNLGEGVR-NKIIFISWSPDVAPIKSKMVYSSSKDTLRRAFTGIGTDIQ 118
Query: 127 ATDPTEMGFDVIMDRA 142
           ATD +E+ ++ ++++ 
Sbjct: 119 ATDFSEVAYETVLEKV 134

>pdb|1CFY|A Chain A, Yeast Cofilin, Monoclinic Crystal Form Length = 143

Iteration: 1
 Score =  106 bits (265), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 88/136 (64%), Gaps = 2/136 (1%)
Query: 7   MATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPD 66
           M+ +G+ VADE   +F ++K  K +++I+F +++    + V K       Y+     LP+
Sbjct: 1   MSRSGVAVADESLTAFNDLKLGKKYKFILFGLNDAKTEIVV-KETSTDPSYDAFLEKLPE 59
Query: 67  DDCRYAVFDFDF-VTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEV 125
           +DC YA++DF++ +  +  ++SKI F  W+P  + +R+KM+YA+SKD LRR L+G+  +V
Sbjct: 60  NDCLYAIYDFEYEINGNEGKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRALNGVSTDV 119
Query: 126 QATDPTEMGFDVIMDR 141
           Q TD +E+ +D +++R
Sbjct: 120 QGTDFSEVSYDSVLER 135

>pdb|1AK6|A Chain A, Destrin, Nmr, Minimized Average Structure Length = 174

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 81/152 (53%), Gaps = 19/152 (12%)
Query: 8   ATTGMWVADECKNSFMEMK---------WKKVHRYIVFKIDEKSKLVTVDK-----VGGA 53
           + +G+ VADE    F +MK          KK  + ++F +    K + V++     VG  
Sbjct: 10  SASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDV 69
Query: 54  G----EGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYAT 109
           G    + ++     LP+ DCRYA++D  F T ++ RK ++ F  WAP  + +++KM+YA+
Sbjct: 70  GVTITDPFKHFVGMLPEKDCRYALYDASFETKES-RKEELMFFLWAPELAPLKSKMIYAS 128
Query: 110 SKDGLRRVLDGIHYEVQATDPTEMGFDVIMDR 141
           SKD +++   GI +E QA  P ++    I ++
Sbjct: 129 SKDAIKKKFQGIKHECQANGPEDLNRACIAEK 160

>pdb|2LJ8|A Chain A, Solution Structure Of AdfCOFILIN FROM TRYPANOSOMA BRUCEI Length = 144

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 74/137 (54%), Gaps = 4/137 (2%)
Query: 7   MATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPD 66
           MA +G+ VADEC  +  +++ KK    I+  +D+KS  + V  +G  G  ++    ++  
Sbjct: 9   MAMSGVSVADECVTALNDLRHKKSRYVIMHIVDQKS--IAVKTIGERGANFDQFIEAIDK 66
Query: 67  DDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQ 126
           +   YA FDF++ T D  R  K+  I+W P +   R KMLY++S+D L  +  G    +Q
Sbjct: 67  NVPCYAAFDFEYTTNDGPR-DKLILISWNPDSGAPRTKMLYSSSRDALVPLTQGFQ-GIQ 124
Query: 127 ATDPTEMGFDVIMDRAK 143
           A D + + F+ I  + K
Sbjct: 125 ANDASGLDFEEISRKVK 141

>pdb|1Q8G|A Chain A, Nmr Structure Of Human Cofilin Length = 166

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 79/137 (57%), Gaps = 19/137 (13%)
Query: 10  TGMWVADECKNSFMEMKW---------KKVHRYIVFKIDEKSKLVTVDK-----VGGAGE 55
           +G+ V+D     F +MK          KK  + ++F + E  K + +++     VG  G+
Sbjct: 3   SGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQ 62
Query: 56  GYEDLAAS----LPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSK 111
             +D  A+    LPD DCRYA++D  + T ++ +K  + FI WAP ++ +++KM+YA+SK
Sbjct: 63  TVDDPYATFVKMLPDKDCRYALYDATYETKES-KKEDLVFIFWAPESAPLKSKMIYASSK 121
Query: 112 DGLRRVLDGIHYEVQAT 128
           D +++ L GI +E+QA 
Sbjct: 122 DAIKKKLTGIKHELQAN 138

>pdb|2XFA|A Chain A, Crystal Structure Of Plasmodium Berghei Actin Depolymerization Factor 2 Length = 148

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 70/126 (55%), Gaps = 7/126 (5%)
Query: 9   TTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVD------KVGGAGEGYEDLAA 62
            +G+ V+DEC   F  +K K +++YI++KI+   K+V VD      ++         +  
Sbjct: 7   VSGVNVSDECIYEFNRLKVKHLNKYIIYKIENLEKIV-VDVLEHDMELTSLDNIIMRIKN 65
Query: 63  SLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIH 122
           +L + +CRY + D    T +   + +I+FI W+P  S+ + KMLYA SK+ L R ++GI 
Sbjct: 66  NLKNTECRYIIADMPIPTPEGVLRDRIYFIFWSPGLSKPKEKMLYAASKESLVRKINGIF 125
Query: 123 YEVQAT 128
             ++ T
Sbjct: 126 KSLEIT 131

>pdb|2L72|A Chain A, Solution Structure And Dynamics Of Adf From Toxoplasma Gondii (Tgadf) Length = 139

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 15/126 (11%)
Query: 9   TTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDD 68
            +GM V + C   F E+K +K  ++IVFKI+    +V  D  G A E       +LP +D
Sbjct: 23  ASGMGVDENCVARFNELKIRKTVKWIVFKIENTKIVVEKDGKGNADE----FRGALPAND 78
Query: 69  CRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQAT 128
           CR+ V+D           +KI F+ W P  + ++ +M YA+SKD L + LDG      A 
Sbjct: 79  CRFGVYDCG---------NKIQFVLWCPDNAPVKPRMTYASSKDALLKKLDG--ATAVAL 127
Query: 129 DPTEMG 134
           +  EMG
Sbjct: 128 EAHEMG 133

>pdb|1TVJ|A Chain A, Solution Structure Of Chick Cofilin Length = 166

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 80/151 (52%), Gaps = 24/151 (15%)
Query: 10  TGMWVADECKNSFMEMK---------WKKVHRYIVFKIDEKSKLVTVDK-----VGGAGE 55
           +G+ V DE    F +MK          KK  + ++F + +  K + V++     VG  G+
Sbjct: 3   SGVTVNDEVIKVFNDMKVRKSSTPEEIKKRKKAVLFCLSDDKKQIIVEEAKQILVGDIGD 62
Query: 56  GYED----LAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSK 111
             ED        LP +DCRYA++D  + T ++ +K  + FI WAP ++ +++KM+YA+SK
Sbjct: 63  TVEDPYTAFVKLLPLNDCRYALYDATYETKES-KKEDLVFIFWAPESAPLKSKMIYASSK 121
Query: 112 DGLRRVLDGIHYEVQATDPTEMGFDVIMDRA 142
           D +++   GI +E Q       G D I DR+
Sbjct: 122 DAIKKKFTGIKHEWQVN-----GLDDIKDRS 147

>pdb|2KVK|A Chain A, Solution Structure Of AdfCOFILIN (LDCOF) FROM LEISHMANIA DONOVANI Length = 144

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 7   MATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPD 66
           MA +G+ + +  + +  +++ KK  RY++  I    K + V +VG     Y DL      
Sbjct: 1   MAISGVTLEESVRGAIDDLRMKK-SRYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFST 59
Query: 67  DDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQ 126
           +   Y  FDF++      ++ K+  I W P  +R R KM+Y+ S+D L  V +G +  +Q
Sbjct: 60  EKPCYVAFDFEYNDA-GSKREKLILIQWIPDTARPREKMMYSASRDALSSVSEG-YLPIQ 117
Query: 127 ATDPTEMGFD 136
           A D  E G D
Sbjct: 118 AND--ESGLD 125

>pdb|3Q2B|A Chain A, Crystal Structure Of An Actin Depolymerizing Factor Length = 124

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 10  TGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDD- 68
           +G+ V D C   F  MK +K   +I+F I +  +++   K  GA     +L  S+  ++ 
Sbjct: 5   SGIRVNDNCVTEFNNMKIRKTCGWIIFVI-QNCEIIIHSK--GASTTLTELVQSIDKNNE 61
Query: 69  --CRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIH 122
             C Y VFD           SKI F  +A  +S  R +M YA+SK  + + ++G++
Sbjct: 62  IQCAYVVFD---------AVSKIHFFMYARESSNSRDRMTYASSKQAILKKIEGVN 108

>pdb|1M4J|A Chain A, Crystal Structure Of The N-Terminal Adf-H Domain Of Mouse Twinfilin Isoform-1 Length = 142

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Query: 10  TGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYED-----LAASL 64
           TG+  +++ K  F   +  K   Y + KI  +++ + V       + +E      +   L
Sbjct: 5   TGIQASEDVKEIFARARNGK---YRLLKISIENEQLVVGSCSPPSDSWEQDYDSFVLPLL 61
Query: 65  PDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIH 122
            D    Y +F  D     N +  +  FIAW+P  S +R KMLYA ++  L++   G H
Sbjct: 62  EDKQPCYVLFRLD---SQNAQGYEWIFIAWSPDHSHVRQKMLYAATRATLKKEFGGGH 116

>pdb|1WFS|A Chain A, Solution Structure Of Glia Maturation Factor-Gamma From Mus Musculus Length = 151

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 60/120 (50%), Gaps = 6/120 (5%)
Query: 14  VADECKNSFMEMKWKKV--HRYIVFKIDEKSKLVTV-DKVGGAGEGYEDLAASLPDDDCR 70
           V  E K +  + +++K   +  I+ K+D+  ++V + D++       E+L   LP+   R
Sbjct: 16  VDPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDELQNISP--EELKLELPERQPR 73
Query: 71  YAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIH-YEVQATD 129
           + V+ + +V  D      + FI  +P   +   +M+YA SK+ L +  +    +E++ TD
Sbjct: 74  FVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRTTD 133

>pdb|3L50|A Chain A, The Crystal Structure Of Human Glia Maturation Factor, Gamma (Gmfg) Length = 136

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 34  IVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIA 93
           I+ K+D+  ++V +++        E+L   LP+   R+ V+ + +V  D      + FI 
Sbjct: 28  IIMKVDKDRQMVVLEE-EFQNISPEELKMELPERQPRFVVYSYKYVHDDGRVSYPLCFIF 86
Query: 94  WAPTASRIRAKMLYATSKDGLRRVLDGIH-YEVQATD 129
            +P   +   +M+YA SK+ L +  +    +E++ TD
Sbjct: 87  SSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRTTD 123

>pdb|1VKK|A Chain A, Crystal Structure Of Glia Maturation Factor-Gamma (Gmfg) From Mus Musculus At 1.50 A Resolution Length = 154

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 60/120 (50%), Gaps = 6/120 (5%)
Query: 14  VADECKNSFMEMKWKKV--HRYIVFKIDEKSKLVTV-DKVGGAGEGYEDLAASLPDDDCR 70
           V  E K +  + +++K   +  I+ K+D+  ++V + D++       E+L   LP+   R
Sbjct: 22  VDPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDELQNISP--EELKLELPERQPR 79
Query: 71  YAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIH-YEVQATD 129
           + V+ + +V  D      + FI  +P   +   +M+YA SK+ L +  +    +E++ TD
Sbjct: 80  FVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRTTD 139

>pdb|2VAC|A Chain A, Structure Of N-Terminal Actin Depolymerizing Factor Homology (Adf-H) Domain Of Human Twinfilin-2 Length = 134

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 9   TTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKL-VTVDKVGGAGEGYEDLAASLPDD 67
           + G+   +E K  F + +   V    V   DE+  L  + + VG   + Y+   A LP  
Sbjct: 1   SMGIHATEELKEFFAKARAGSVRLIKVVIEDEQLVLGASQEPVGRWDQDYD--RAVLPLL 58
Query: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIH 122
           D +   +    +   N +  +  F+AW+P  S +R KMLYA ++  +++   G H
Sbjct: 59  DAQQPCYLLYRLDSQNAQGFEWLFLAWSPDNSPVRLKMLYAATRATVKKEFGGGH 113

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	143
1f7s_A	139	Actin depolymerizing factor (ADF); KINK in alpha-h	1e-49
1cnu_A	137	Actophorin, ADF, cofilin; actin-binding protein, c	3e-47
2i2q_A	137	Cofilin; N-terminal serine, actin-binding protein;	2e-45
2kd5_A	144	ADF H, actin severing and dynamics regulatory prot	7e-45
1cfy_A	143	Cofilin; actin-binding, cytoskeleton, actin-bindin	1e-44
2xfa_A	148	Actin depolymerization factor 2; actin binding pro	4e-42
1ak6_A	174	Destrin; actin depolymerization factor, actin-bind	3e-38
3q2b_A	124	Pfadf1, cofilin/actin-depolymerizing factor homolo	3e-38
2l72_A	139	Tgadf, actin depolymerizing factor, putative; ADF/	5e-38
1tvj_A	166	Cofilin; ADF, actin binding protein, actin depolym	2e-37
1v6f_A	151	MGMF-beta, GLIA maturation factor, beta; actin bin	4e-36
3daw_B	164	Twinfilin-1, protein A6; actin depolymerisation, a	4e-36
1vkk_A	154	GMF-gamma, GLIA maturation factor gamma; 15079298,	2e-35
2vac_A	134	Twinfilin-2; transferase, actin binding, phosphory	3e-35
2w0i_A	135	Twinfilin-2; cytoskeleton, actin-binding, actin bi	8e-35
2d8b_A	166	Twinfilin-1; cell-free protein synthesis, actin-bi	1e-33
1m4j_A	142	A6 gene product, twinfilin; mixed beta-sheet, PAIR	7e-33
1x67_A	146	Drebrin-like protein; cell-free protein synthesis,	2e-26
1hqz_1	141	ABP1P, actin-binding protein; cofilin homology dom	9e-26
1t3y_A	141	Coactosin-like protein; beta sheet, protein bindin	1e-19

>1f7s_A Actin depolymerizing factor (ADF); KINK in alpha-helix 3, plant protein; HET: LDA; 2.00A {Arabidopsis thaliana} SCOP: d.109.1.2 Length = 139

 Score =  154 bits (390), Expect = 1e-49
 Identities = 80/135 (59%), Positives = 104/135 (77%)

Query: 8   ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDD 67
           A +GM V D+CK  F+E+K K+ HR+IV+KI+EK K V V+KVG   + YE+ AA LP D
Sbjct: 4   AASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPAD 63

Query: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQA 127
           +CRYA++DFDFVT +NC+KSKIFFIAW P  +++R+KM+YA+SKD  +R LDGI  E+QA
Sbjct: 64  ECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQA 123

Query: 128 TDPTEMGFDVIMDRA 142
           TDPTEM  DV   RA
Sbjct: 124 TDPTEMDLDVFRSRA 138

>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A Length = 137

 Score =  148 bits (375), Expect = 3e-47
 Identities = 59/133 (44%), Positives = 89/133 (66%), Gaps = 1/133 (0%)

Query: 11  GMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCR 70
           G+ V+D+C   F E+K    HRY+ FK++  +  V V+ VGG    YED  + LP+ DCR
Sbjct: 2   GIAVSDDCVQKFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCR 61

Query: 71  YAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDP 130
           YA+FD++F  VD  +++KI FI WAP ++ I++KM+Y ++KD +++ L GI  EVQATD 
Sbjct: 62  YAIFDYEF-QVDGGQRNKITFILWAPDSAPIKSKMMYTSTKDSIKKKLVGIQVEVQATDA 120

Query: 131 TEMGFDVIMDRAK 143
            E+  D + +RAK
Sbjct: 121 AEISEDAVSERAK 133

>2i2q_A Cofilin; N-terminal serine, actin-binding protein; HET: LDA; 1.72A {Schizosaccharomyces pombe} Length = 137

 Score =  143 bits (363), Expect = 2e-45
 Identities = 49/137 (35%), Positives = 88/137 (64%), Gaps = 2/137 (1%)

Query: 7   MATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPD 66
           M+ +G+ V+ EC  +F E+K  K  RY+VFK+++    + V +     + ++     LP+
Sbjct: 1   MSFSGVKVSPECLEAFQELKLGKSLRYVVFKMNDTKTEI-VVEKKSTDKDFDTFLGDLPE 59

Query: 67  DDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQ 126
            DCRYA++DF+F   +  R +KI FI+W+P  + I++KM+Y++SKD LRR   GI  ++Q
Sbjct: 60  KDCRYAIYDFEFNLGEGVR-NKIIFISWSPDVAPIKSKMVYSSSKDTLRRAFTGIGTDIQ 118

Query: 127 ATDPTEMGFDVIMDRAK 143
           ATD +E+ ++ ++++  
Sbjct: 119 ATDFSEVAYETVLEKVT 135

>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A Length = 143

 Score =  142 bits (358), Expect = 1e-44
 Identities = 47/138 (34%), Positives = 88/138 (63%), Gaps = 2/138 (1%)

Query: 7   MATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPD 66
           M+ +G+ VADE   +F ++K  K +++I+F +++    + V +       Y+     LP+
Sbjct: 1   MSRSGVAVADESLTAFNDLKLGKKYKFILFGLNDAKTEIVVKE-TSTDPSYDAFLEKLPE 59

Query: 67  DDCRYAVFDFDF-VTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEV 125
           +DC YA++DF++ +  +  ++SKI F  W+P  + +R+KM+YA+SKD LRR L+G+  +V
Sbjct: 60  NDCLYAIYDFEYEINGNEGKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRALNGVSTDV 119

Query: 126 QATDPTEMGFDVIMDRAK 143
           Q TD +E+ +D +++R  
Sbjct: 120 QGTDFSEVSYDSVLERVS 137

>2xfa_A Actin depolymerization factor 2; actin binding protein, protein binding; 2.10A {Plasmodium berghei} Length = 148

 Score =  135 bits (341), Expect = 4e-42
 Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 6/136 (4%)

Query: 8   ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAG-----EGYEDLAA 62
             +G+ V+DEC   F  +K K +++YI++KI+   K+V                   +  
Sbjct: 6   MVSGVNVSDECIYEFNRLKVKHLNKYIIYKIENLEKIVVDVLEHDMELTSLDNIIMRIKN 65

Query: 63  SLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIH 122
           +L + +CRY + D    T +   + +I+FI W+P  S+ + KMLYA SK+ L R ++GI 
Sbjct: 66  NLKNTECRYIIADMPIPTPEGVLRDRIYFIFWSPGLSKPKEKMLYAASKESLVRKINGIF 125

Query: 123 YEVQAT-DPTEMGFDV 137
             ++ T D  E   ++
Sbjct: 126 KSLEITCDINEFEEEL 141

>1ak6_A Destrin; actin depolymerization factor, actin-binding protein; NMR {Homo sapiens} SCOP: d.109.1.2 PDB: 1ak7_A 1q8g_A 1q8x_A 3j0s_M Length = 174

 Score =  126 bits (318), Expect = 3e-38
 Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 19/153 (12%)

Query: 8   ATTGMWVADECKNSFMEMK---------WKKVHRYIVFKIDEKSKLVTVDKVGGAGEG-- 56
           + +G+ VADE    F +MK          KK  + ++F +    K + V++      G  
Sbjct: 10  SASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDV 69

Query: 57  -------YEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYAT 109
                  ++     LP+ DCRYA++D  F T    RK ++ F  WAP  + +++KM+YA+
Sbjct: 70  GVTITDPFKHFVGMLPEKDCRYALYDASFET-KESRKEELMFFLWAPELAPLKSKMIYAS 128

Query: 110 SKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRA 142
           SKD +++   GI +E QA  P ++    I ++ 
Sbjct: 129 SKDAIKKKFQGIKHECQANGPEDLNRACIAEKL 161

>3q2b_A Pfadf1, cofilin/actin-depolymerizing factor homolog 1; actin regulator, actin-binding protein; HET: TAR; 1.60A {Plasmodium falciparum} PDB: 2xf1_A Length = 124

 Score =  125 bits (314), Expect = 3e-38
 Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 15/133 (11%)

Query: 8   ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDD 67
             +G+ V D C   F  MK +K   +I+F I     ++      GA     +L  S+  +
Sbjct: 3   MISGIRVNDNCVTEFNNMKIRKTCGWIIFVIQNCEIII---HSKGASTTLTELVQSIDKN 59

Query: 68  D---CRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYE 124
           +   C Y VFD           SKI F  +A  +S  R +M YA+SK  + + ++G++  
Sbjct: 60  NEIQCAYVVFDA---------VSKIHFFMYARESSNSRDRMTYASSKQAILKKIEGVNVL 110

Query: 125 VQATDPTEMGFDV 137
               +  +   D+
Sbjct: 111 TSVIESAQDVADL 123

>2l72_A Tgadf, actin depolymerizing factor, putative; ADF/cofilin, actin binding, protein binding; NMR {Toxoplasma gondii} Length = 139

 Score =  125 bits (314), Expect = 5e-38
 Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 15/129 (11%)

Query: 6   KMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLP 65
            MA+ GM V + C   F E+K +K  ++IVFKI+    +V  D         ++   +LP
Sbjct: 21  HMAS-GMGVDENCVARFNELKIRKTVKWIVFKIENTKIVVEKDG----KGNADEFRGALP 75

Query: 66  DDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG-IHYE 124
            +DCR+ V+D            KI F+ W P  + ++ +M YA+SKD L + LDG     
Sbjct: 76  ANDCRFGVYDCGN---------KIQFVLWCPDNAPVKPRMTYASSKDALLKKLDGATAVA 126

Query: 125 VQATDPTEM 133
           ++A +  ++
Sbjct: 127 LEAHEMGDL 135

>1tvj_A Cofilin; ADF, actin binding protein, actin depolymerizing factor, actin-binding protein; NMR {Gallus gallus} Length = 166

 Score =  124 bits (311), Expect = 2e-37
 Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 20/154 (12%)

Query: 7   MATTGMWVADECKNSFMEMK---------WKKVHRYIVFKIDEKSKLVTVDKVGGAGEG- 56
           MA+ G+ V DE    F +MK          KK  + ++F + +  K + V++      G 
Sbjct: 1   MAS-GVTVNDEVIKVFNDMKVRKSSTPEEIKKRKKAVLFCLSDDKKQIIVEEAKQILVGD 59

Query: 57  --------YEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYA 108
                   Y      LP +DCRYA++D  + T    +K  + FI WAP ++ +++KM+YA
Sbjct: 60  IGDTVEDPYTAFVKLLPLNDCRYALYDATYET-KESKKEDLVFIFWAPESAPLKSKMIYA 118

Query: 109 TSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRA 142
           +SKD +++   GI +E Q     ++     +   
Sbjct: 119 SSKDAIKKKFTGIKHEWQVNGLDDIKDRSTLGEK 152

>1v6f_A MGMF-beta, GLIA maturation factor, beta; actin binding protein, cytoskeleton, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.109.1.2 Length = 151

 Score =  120 bits (303), Expect = 4e-36
 Identities = 26/140 (18%), Positives = 64/140 (45%), Gaps = 6/140 (4%)

Query: 6   KMATTGMW--VADECKNSFMEMKWKK--VHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLA 61
             + + +   VA++      + +++K   +  I+ KID+  +LV +D+    G   ++L 
Sbjct: 6   SGSESLVVCDVAEDLVEKLRKFRFRKETHNAAIIMKIDKDERLVVLDE-ELEGVSPDELK 64

Query: 62  ASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGI 121
             LP+   R+ V+ + +   D      + FI  +P   +   +M+YA SK+ L +  +  
Sbjct: 65  DELPERQPRFIVYSYKYQHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNKLVQTAELT 124

Query: 122 HYEVQATDPTEMGFDVIMDR 141
               +  +  ++  + + ++
Sbjct: 125 K-VFEIRNTEDLTEEWLREK 143

>3daw_B Twinfilin-1, protein A6; actin depolymerisation, actin binding proteins, cytoskeleton, structural protein/contractIle protein complex; HET: ATP; 2.55A {Mus musculus} PDB: 2hd7_A Length = 164

 Score =  120 bits (303), Expect = 4e-36
 Identities = 24/136 (17%), Positives = 56/136 (41%), Gaps = 8/136 (5%)

Query: 11  GMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCR 70
              ++ +   +  ++  K+   Y+  +ID K++ + +           DL   +P D  R
Sbjct: 21  AFPISRDAFQALEKLSKKQ-LNYVQLEIDIKNETIILAN--TENTELRDLPKRIPKDSAR 77

Query: 71  YAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG-----IHYEV 125
           Y  F +      +  +S +F  +       IR +MLY++ K  L  +++      +  ++
Sbjct: 78  YHFFLYKHSHEGDYLESVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKI 137

Query: 126 QATDPTEMGFDVIMDR 141
           +  +  E+  D + D 
Sbjct: 138 EIDNGDELTADFLYDE 153

>1vkk_A GMF-gamma, GLIA maturation factor gamma; 15079298, structural GEN JCSG, protein structure initiative, PSI, joint center for S genomics; 1.35A {Mus musculus} SCOP: d.109.1.2 PDB: 1wfs_A 3l50_A Length = 154

 Score =  119 bits (298), Expect = 2e-35
 Identities = 25/137 (18%), Positives = 59/137 (43%), Gaps = 4/137 (2%)

Query: 7   MATTGMWVADECKNSFMEMKWKK--VHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASL 64
            +     V  E K +  + +++K   +  I+ K+D+  ++V ++         E+L   L
Sbjct: 15  DSLVVCEVDPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLED-ELQNISPEELKLEL 73

Query: 65  PDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYE 124
           P+   R+ V+ + +V  D      + FI  +P   +   +M+YA SK+ L +  +     
Sbjct: 74  PERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTK-V 132

Query: 125 VQATDPTEMGFDVIMDR 141
            +     ++    + ++
Sbjct: 133 FEIRTTDDLTETWLKEK 149

>2vac_A Twinfilin-2; transferase, actin binding, phosphorylation, cofilin-like, cytoskeleton, actin-binding, protein tyrosine kinase-9; 1.70A {Homo sapiens} Length = 134

 Score =  118 bits (296), Expect = 3e-35
 Identities = 28/130 (21%), Positives = 56/130 (43%), Gaps = 3/130 (2%)

Query: 9   TTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDD 68
           + G+   +E K  F + +     R I   I+++  ++   +        +   A LP  D
Sbjct: 1   SMGIHATEELKEFFAKARAGS-VRLIKVVIEDEQLVLGASQEPVGRWDQDYDRAVLPLLD 59

Query: 69  CRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHY--EVQ 126
            +   +    +   N +  +  F+AW+P  S +R KMLYA ++  +++   G H   E+ 
Sbjct: 60  AQQPCYLLYRLDSQNAQGFEWLFLAWSPDNSPVRLKMLYAATRATVKKEFGGGHIKDELF 119

Query: 127 ATDPTEMGFD 136
            T   ++ F 
Sbjct: 120 GTVKDDLSFA 129

>2w0i_A Twinfilin-2; cytoskeleton, actin-binding, actin binding, cofilin-like, phosphoprotein, phosphorylation, transferase, protein tyros kinase-9; 1.8A {Homo sapiens} Length = 135

 Score =  116 bits (293), Expect = 8e-35
 Identities = 26/135 (19%), Positives = 55/135 (40%), Gaps = 8/135 (5%)

Query: 12  MWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRY 71
           M +  E + +  ++K K    YI  K+D + + + +            L + +P D  RY
Sbjct: 2   MPLQPEAQRALQQLKQKM-VNYIQMKLDLERETIELVHT--EPTDVAQLPSRVPRDAARY 58

Query: 72  AVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLD-----GIHYEVQ 126
             F +      +  +S +F  +       I+ +MLY++ K  L   ++      I  +++
Sbjct: 59  HFFLYKHTHEGDPLESVVFIYSMPGYKCSIKERMLYSSCKSRLLDSVEQDFHLEIAKKIE 118

Query: 127 ATDPTEMGFDVIMDR 141
             D  E+  + + D 
Sbjct: 119 IGDGAELTAEFLDDE 133

>2d8b_A Twinfilin-1; cell-free protein synthesis, actin-binding protein, developmental regulation, cellular remodeling, cytoskeleton, morphology; NMR {Mus musculus} Length = 166

 Score =  114 bits (287), Expect = 1e-33
 Identities = 24/136 (17%), Positives = 56/136 (41%), Gaps = 8/136 (5%)

Query: 11  GMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCR 70
              ++ +   +  ++  K+   Y+  +ID K++ + +           DL   +P D  R
Sbjct: 26  AFPISRDAFQALEKLSKKQ-LNYVQLEIDIKNETIILAN--TENTELRDLPKRIPKDSAR 82

Query: 71  YAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG-----IHYEV 125
           Y  F +      +  +S +F  +       IR +MLY++ K  L  +++      +  ++
Sbjct: 83  YHFFLYKHSHEGDYLESVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKI 142

Query: 126 QATDPTEMGFDVIMDR 141
           +  +  E+  D + D 
Sbjct: 143 EIDNGDELTADFLYDE 158

>1m4j_A A6 gene product, twinfilin; mixed beta-sheet, PAIR of alpha-helices, structural protein; 1.60A {Mus musculus} SCOP: d.109.1.2 Length = 142

 Score =  112 bits (281), Expect = 7e-33
 Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 14/145 (9%)

Query: 7   MAT-TGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYED-----L 60
           M+  TG+  +++ K  F   +     +Y + KI  +++ + V       + +E      +
Sbjct: 1   MSHQTGIQASEDVKEIFARAR---NGKYRLLKISIENEQLVVGSCSPPSDSWEQDYDSFV 57

Query: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG 120
              L D    Y +F  D     N +  +  FIAW+P  S +R KMLYA ++  L++   G
Sbjct: 58  LPLLEDKQPCYVLFRLDS---QNAQGYEWIFIAWSPDHSHVRQKMLYAATRATLKKEFGG 114

Query: 121 IH--YEVQATDPTEMGFDVIMDRAK 143
            H   EV  T   ++          
Sbjct: 115 GHIKDEVFGTVKEDVSLHGYKKYLL 139

>1x67_A Drebrin-like protein; cell-free protein synthesis, actin-binding protein, SH3P7, MABP1, T-cell lymphocyte signaling and regulation; NMR {Homo sapiens} Length = 146

 Score = 95.9 bits (238), Expect = 2e-26
 Identities = 26/139 (18%), Positives = 47/139 (33%), Gaps = 6/139 (4%)

Query: 4   AFKMATTGMWVADECKNSFMEMKWKKVH-RYIVFKIDEKSKLVTVDKVGGAGEGYEDLAA 62
           +  MA          + +++ +  +K    + +F  +  S  + V   G  G   E++  
Sbjct: 5   SSGMAANLSRNGPALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGEGG--LEEMVE 62

Query: 63  SLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIH 122
            L      YA   F  V   N    K   I W         K   A+    +   L G H
Sbjct: 63  ELNSGKVMYA---FCRVKDPNSGLPKFVLINWTGEGVNDVRKGACASHVSTMASFLKGAH 119

Query: 123 YEVQATDPTEMGFDVIMDR 141
             + A    ++  + IM++
Sbjct: 120 VTINARAEEDVEPECIMEK 138

>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2 Length = 141

 Score = 93.9 bits (233), Expect = 9e-26
 Identities = 21/144 (14%), Positives = 54/144 (37%), Gaps = 13/144 (9%)

Query: 1   MAMAFKMATTGMWVADECKNSFMEMKWKKV--HRYIVFKIDEKSKLVTVDKVGGAGEGYE 58
           MA+     TT    + E    ++++         +++   + K +     +    G  + 
Sbjct: 1   MALEPIDYTT---HSREIDAEYLKIVRGSDPDTTWLIISPNAKKEY----EPESTGSSFH 53

Query: 59  DLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGL-RRV 117
           D      +   +Y +     V+       KI  I W P ++ ++ +  +A +   +   +
Sbjct: 54  DFLQLFDETKVQYGLAR---VSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNL 110

Query: 118 LDGIHYEVQATDPTEMGFDVIMDR 141
             G H +V A D  ++  + ++ +
Sbjct: 111 FKGYHVQVTARDEDDLDENELLMK 134

>1t3y_A Coactosin-like protein; beta sheet, protein binding; 1.15A {Homo sapiens} SCOP: d.109.1.2 PDB: 1t2l_A 1t3x_A 1vfq_A 1tmw_A 1wnj_A 1udm_A 1wm4_A Length = 141

 Score = 78.1 bits (192), Expect = 1e-19
 Identities = 23/116 (19%), Positives = 37/116 (31%), Gaps = 6/116 (5%)

Query: 28  KKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKS 87
                ++ FK D  + +      G  G  Y+       DD   +A   F        ++S
Sbjct: 20  GSAVIWVTFKYDGSTIVP-----GEQGAEYQHFIQQCTDDVRLFAFVRFTT-GDAMSKRS 73

Query: 88  KIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK 143
           K   I W         +    T K  ++ V+     E   +D  E+  D I    K
Sbjct: 74  KFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIKSELK 129

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	143
1f7s_A	139	Actin depolymerizing factor (ADF); KINK in alpha-h	100.0
2i2q_A	137	Cofilin; N-terminal serine, actin-binding protein;	100.0
1cfy_A	143	Cofilin; actin-binding, cytoskeleton, actin-bindin	100.0
2kvk_A	144	Actin severing and dynamics regulatory protein; AD	100.0
1cnu_A	137	Actophorin, ADF, cofilin; actin-binding protein, c	100.0
2xfa_A	148	Actin depolymerization factor 2; actin binding pro	100.0
2kd5_A	144	ADF H, actin severing and dynamics regulatory prot	100.0
2lj8_A	144	Cofilin/actin depolymerizing factor, putative; pro	100.0
1tvj_A	166	Cofilin; ADF, actin binding protein, actin depolym	100.0
1vkk_A	154	GMF-gamma, GLIA maturation factor gamma; 15079298,	100.0
1m4j_A	142	A6 gene product, twinfilin; mixed beta-sheet, PAIR	100.0
1ak6_A	174	Destrin; actin depolymerization factor, actin-bind	100.0
1v6f_A	151	MGMF-beta, GLIA maturation factor, beta; actin bin	100.0
2w0i_A	135	Twinfilin-2; cytoskeleton, actin-binding, actin bi	100.0
2vac_A	134	Twinfilin-2; transferase, actin binding, phosphory	100.0
2d8b_A	166	Twinfilin-1; cell-free protein synthesis, actin-bi	100.0
1hqz_1	141	ABP1P, actin-binding protein; cofilin homology dom	100.0
3daw_B	164	Twinfilin-1, protein A6; actin depolymerisation, a	100.0
3q2b_A	124	Pfadf1, cofilin/actin-depolymerizing factor homolo	100.0
2l72_A	139	Tgadf, actin depolymerizing factor, putative; ADF/	100.0
1x67_A	146	Drebrin-like protein; cell-free protein synthesis,	100.0
1t3y_A	141	Coactosin-like protein; beta sheet, protein bindin	100.0

>1f7s_A Actin depolymerizing factor (ADF); KINK in alpha-helix 3, plant protein; HET: LDA; 2.00A {Arabidopsis thaliana} SCOP: d.109.1.2

Probab=100.00  E-value=1.7e-45  Score=259.90  Aligned_cols=137  Identities=58%  Similarity=1.020  Sum_probs=119.0

Q ss_pred             ccccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCcee
Q 032333            7 MATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRK   86 (143)
Q Consensus         7 m~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~   86 (143)
                      |++|||.+++||+++|++++.++.+|||+|+|++++++|+|+++|++..+|+||.+.||+++|||++||+++++.+|+.+
T Consensus         3 ~~~sGi~v~~e~~~af~~~~~~~~~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~   82 (139)
T 1f7s_A            3 NAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENCQK   82 (139)
T ss_dssp             --CCCCEECHHHHHHHHHHHHHCCCSEEEEEEETTTTEEEEEEECCSSCCHHHHHTTSCTTSCEEEEEEEEEECTTSCEE
T ss_pred             cCccCcEeCHHHHHHHHHHHcCCCcEEEEEEECCCCcEEEEEeecCCCCCHHHHHHhCCCCCceEEEEEeeeeccccCcc
Confidence            78999999999999999999976799999999998889999998876568999999999999999999999999999999


Q ss_pred             eeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333           87 SKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK  143 (143)
Q Consensus        87 ~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~  143 (143)
                      +||+||+|||++|++|+||+|||+|++|++.|+|++.+||++|++||+++.|.+|++
T Consensus        83 ~k~vfI~w~P~~a~v~~KmlyAssk~~l~~~l~g~~v~i~a~d~~el~~~~i~~~~~  139 (139)
T 1f7s_A           83 SKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRAN  139 (139)
T ss_dssp             EEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCCEEEEECCTTC-----------
T ss_pred             cCEEEEEECCCCCChhHheehHHhHHHHHHhcCCeEEEEEECChHHCCHHHHHHhhC
Confidence            999999999999999999999999999999999999999999999999999999874

>2i2q_A Cofilin; N-terminal serine, actin-binding protein; HET: LDA; 1.72A {Schizosaccharomyces pombe}

Probab=100.00  E-value=4.5e-45  Score=256.95  Aligned_cols=135  Identities=36%  Similarity=0.782  Sum_probs=115.1

Q ss_pred             ccccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCcee
Q 032333            7 MATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRK   86 (143)
Q Consensus         7 m~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~   86 (143)
                      |++|||++++||.++|++|+.++.+|||+|+|+.++++|++++ +..+.+|++|.+.||+++|||++||+++.+.+| .+
T Consensus         1 ~~~sGi~v~~e~~~a~~~~~~~~~~~~ii~~i~~~~~~i~v~~-~~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~-~~   78 (137)
T 2i2q_A            1 MSFSGVKVSPECLEAFQELKLGKSLRYVVFKMNDTKTEIVVEK-KSTDKDFDTFLGDLPEKDCRYAIYDFEFNLGEG-VR   78 (137)
T ss_dssp             -CCSCCEECHHHHHHHHHHHHTCCCSEEEEEECTTSSEEEEEE-EECCCCHHHHHHTSCSSSCEEEEEEEEECSSSS-CE
T ss_pred             CCCCCcccCHHHHHHHHHHHCCCCceEEEEEECCCCcEEEEec-CCCCCCHHHHHHhCCCcCceEEEEEeeeecCCC-Cc
Confidence            7899999999999999999998779999999998888999987 444578999999999999999999999988777 89


Q ss_pred             eeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333           87 SKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK  143 (143)
Q Consensus        87 ~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~  143 (143)
                      +||+||+|||++|++|+||+|||+|++|++.|+|++++||++|++||+++.+.+|++
T Consensus        79 ~k~vfI~w~Pd~a~vk~KMlyassk~~l~~~l~g~~~~i~a~d~~el~~~~i~~kl~  135 (137)
T 2i2q_A           79 NKIIFISWSPDVAPIKSKMVYSSSKDTLRRAFTGIGTDIQATDFSEVAYETVLEKVT  135 (137)
T ss_dssp             EEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCCCCCEEEEECCCC------------
T ss_pred             cCEEEEEECCCCCChhHhhhhHHHHHHHHHHhcCceEEEEECChHHcCHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999999999999874

>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A

Probab=100.00  E-value=1e-44  Score=256.79  Aligned_cols=135  Identities=36%  Similarity=0.744  Sum_probs=124.6

Q ss_pred             ccccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCC-ce
Q 032333            7 MATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDN-CR   85 (143)
Q Consensus         7 m~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~-~~   85 (143)
                      |++|||.+++||.++|++++.++.+|||+|+|+.++++|+|+++++ ..+|++|.+.||+++|||++||+++.+++| +.
T Consensus         1 ~~~sGi~v~~e~~~a~~~~~~~~~~~~ii~~i~~~~~~i~v~~~g~-~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~   79 (143)
T 1cfy_A            1 MSRSGVAVADESLTAFNDLKLGKKYKFILFGLNDAKTEIVVKETST-DPSYDAFLEKLPENDCLYAIYDFEYEINGNEGK   79 (143)
T ss_dssp             -----CEECHHHHHHHHHHHHHCCCSEEEEEECTTSSEEEEEEEEC-CCCHHHHHTTSCTTCCEEEEEEEEEECSSSCCE
T ss_pred             CCcCCcEeCHHHHHHHHHHHCCCCeeEEEEEEcCCCCEEEEEecCC-CCCHHHHHHhCCCCCcEEEEEEeeeecCCCccc
Confidence            7899999999999999999998779999999998888999998886 578999999999999999999999988888 89


Q ss_pred             eeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhh
Q 032333           86 KSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRA  142 (143)
Q Consensus        86 ~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~  142 (143)
                      ++||+||+|||++|++|+||+|||+|++|++.|+|++.+||++|++||+++.|.+|+
T Consensus        80 ~~k~vfI~w~Pd~a~v~~KmlyAssk~~l~~~l~g~~~~i~a~d~~el~~~~i~~kl  136 (143)
T 1cfy_A           80 RSKIVFFTWSPDTAPVRSKMVYASSKDALRRALNGVSTDVQGTDFSEVSYDSVLERV  136 (143)
T ss_dssp             EEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTTCCEEEEESSGGGGSHHHHHHHH
T ss_pred             ccCEEEEEECCCCCChhheeehHhhHHHHHHhcCCceEEEEeCChHHCCHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999987

>2kvk_A Actin severing and dynamics regulatory protein; ADF/cofilin, hormone; NMR {Leishmania donovani}

Probab=100.00  E-value=5.1e-44  Score=253.82  Aligned_cols=133  Identities=28%  Similarity=0.583  Sum_probs=125.3

Q ss_pred             ccccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCcee
Q 032333            7 MATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRK   86 (143)
Q Consensus         7 m~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~   86 (143)
                      |+.|||.++++|+++|++||.++ +||++|+|+.++++|+++.+++.+.+|+||.+.||+++|||++||+++.+. ++.+
T Consensus         1 Ma~SGv~v~de~~~af~~lk~~k-~~~vi~~I~~~~~~i~v~~~~~~~~~~~e~~~~L~~~~prY~~y~~~~~~~-~~~~   78 (144)
T 2kvk_A            1 MAISGVTLEESVRGAIDDLRMKK-SRYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFSTEKPCYVAFDFEYNDA-GSKR   78 (144)
T ss_dssp             CCCCCCEECHHHHHHHHHHHTTS-SSEEEEEECTTSCEEEEEEEECTTCCHHHHHHTCCTTSCCEEEEEEEEEET-TEEE
T ss_pred             CCcCCcccCHHHHHHHHHHhcCC-ceEEEEEEeCCCcEEEEEeccCCCCCHHHHHHhCCccCceEEEEEeeeccC-CCCc
Confidence            88999999999999999999976 899999999998999999888777899999999999999999999999754 5678


Q ss_pred             eeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhh
Q 032333           87 SKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRA  142 (143)
Q Consensus        87 ~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~  142 (143)
                      +||+||+|||++||+|+||+|||+|.+|++.|+| +++||++|++||+++.|.+|+
T Consensus        79 ~k~vfI~w~Pd~a~vk~KMlyassk~~lk~~l~~-~~~i~a~d~~el~~e~i~~kl  133 (144)
T 2kvk_A           79 EKLILIQWIPDTARPREKMMYSASRDALSSVSEG-YLPIQANDESGLDAEEIIRKV  133 (144)
T ss_dssp             EEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTT-EEEEEESSGGGGCHHHHHHHH
T ss_pred             ccEEEEEECCCCCCHHHHHHHHHHHHHHHHhcCC-EEEEEECChHHCCHHHHHHHH
Confidence            9999999999999999999999999999999988 579999999999999999987

>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A

Probab=100.00  E-value=2.2e-43  Score=248.23  Aligned_cols=133  Identities=43%  Similarity=0.842  Sum_probs=125.5

Q ss_pred             cCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeeeE
Q 032333           10 TGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKI   89 (143)
Q Consensus        10 sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~   89 (143)
                      |||++++||.++|++|+.++.+|||+|+|+.++++|+++++|+.+.+|++|.+.||+++|||++||+++.+.+| .++||
T Consensus         1 SGi~v~~e~~~a~~~~~~~~~~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~-~~~k~   79 (137)
T 1cnu_A            1 SGIAVSDDCVQKFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCRYAIFDYEFQVDGG-QRNKI   79 (137)
T ss_dssp             -CCEECHHHHHHHHHHHHHCCCSEEEEEECTTSSEEEEEEECCTTCCHHHHHTTSCTTSCEEEEEEEEEEETTE-EEEEE
T ss_pred             CCCccCHHHHHHHHHHHcCCCccEEEEEEcCCCCEEEEEeccCCCCCHHHHHHhCCCCCceEEEEEeeeecCCC-CccCE
Confidence            79999999999999999986799999999988889999998865678999999999999999999999988776 89999


Q ss_pred             EEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333           90 FFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK  143 (143)
Q Consensus        90 vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~  143 (143)
                      +||+|||++|++|+||+|||+|++|++.|+|++++||++|++||+++.|.+|++
T Consensus        80 vfI~w~Pd~a~v~~Kmlyassk~~l~~~l~g~~~~i~a~~~~el~~~~i~~kl~  133 (137)
T 1cnu_A           80 TFILWAPDSAPIKSKMMYTSTKDSIKKKLVGIQVEVQATDAAEISEDAVSERAK  133 (137)
T ss_dssp             EEEEECCTTSCHHHHHHHHHHHHHHHHHSTTCCEEEEECSTTTTSHHHHHHHHT
T ss_pred             EEEEECCCCCChHHheehHHhHHHHHHHhcCceEEEEECChHHCCHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999974

>2xfa_A Actin depolymerization factor 2; actin binding protein, protein binding; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=5.7e-44  Score=254.41  Aligned_cols=134  Identities=30%  Similarity=0.549  Sum_probs=124.3

Q ss_pred             cccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEe------ecCCCCCChHHHhhcCCCCCceEEEEeeeeeec
Q 032333            8 ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVD------KVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTV   81 (143)
Q Consensus         8 ~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~------~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~   81 (143)
                      ++|||.+++||.++|++++.++.+|||+|+| .++++|+++      .+++...+|++|.+.||+++|||++||++++++
T Consensus         6 m~sGi~v~~e~~~af~~~k~~k~~~~ii~~i-~~~~~i~v~~~~~~~~~g~~~~~~~~~~~~L~~~~prY~~y~~~~~~~   84 (148)
T 2xfa_A            6 MVSGVNVSDECIYEFNRLKVKHLNKYIIYKI-ENLEKIVVDVLEHDMELTSLDNIIMRIKNNLKNTECRYIIADMPIPTP   84 (148)
T ss_dssp             CCCCCEECHHHHHHHHHHHTSCCCSEEEEEE-ETTTEEEEEEEECCTTCCCHHHHHHHHHHTCBTTBCEEEEEEEEECCS
T ss_pred             ccCCCeeCHHHHHHHHHHHCCCceEEEEEEE-CCCCEEEEEecccccccCCCCCCHHHHHHhCCcCCcEEEEEecccccC
Confidence            4699999999999999999987799999999 556789998      555434679999999999999999999999998


Q ss_pred             CCceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333           82 DNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK  143 (143)
Q Consensus        82 ~~~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~  143 (143)
                      +|++++||+||+|||++|++|+||+|||+|++|++.|+|++++||++| +||+++.|.++|+
T Consensus        85 ~g~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~i~atd-~el~~~~i~~k~~  145 (148)
T 2xfa_A           85 EGVLRDRIYFIFWSPGLSKPKEKMLYAASKESLVRKINGIFKSLEITC-DINEFEEELKAII  145 (148)
T ss_dssp             SCCCEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCSEEEEECS-CGGGHHHHHHHHH
T ss_pred             CCCcccCEEEEEECCCCCChHHHhHhHHHHHHHHHHhcCCeEEEEEEc-ccCCHHHHHHHhh
Confidence            999999999999999999999999999999999999999999999999 9999999999873

>2lj8_A Cofilin/actin depolymerizing factor, putative; protein binding; NMR {Trypanosoma brucei}

Probab=100.00  E-value=3.7e-43  Score=249.40  Aligned_cols=135  Identities=32%  Similarity=0.660  Sum_probs=121.9

Q ss_pred             ccccccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCc
Q 032333            5 FKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNC   84 (143)
Q Consensus         5 ~~m~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~   84 (143)
                      -+|++|||.+++||+++|++||.++ .||++|+|+++ ++++++..+..+.+|++|.+.||+++|||++|++.+.+.+ +
T Consensus         7 ~~Ma~SGi~vsde~~~af~~lk~~k-~~~ii~~i~d~-~~~vv~~~~~~~~~~de~~~~L~~~~prY~~y~~~~~~~~-~   83 (144)
T 2lj8_A            7 HHMAMSGVSVADECVTALNDLRHKK-SRYVIMHIVDQ-KSIAVKTIGERGANFDQFIEAIDKNVPCYAAFDFEYTTND-G   83 (144)
T ss_dssp             --CCCSSCEECHHHHHHHHHHTTTS-SSEEEEEEETT-TEEEEEEECSSCCCHHHHHHHCCSSSCEEEEEEEEECSSS-S
T ss_pred             CccccCCceeCHHHHHHHHHHhcCC-ceEEEEEEECC-cEEEEEecCCCCCCHHHHHHhCcccCCcceeeeeeeccCC-C
Confidence            3799999999999999999999876 89999999876 4666777776678999999999999999999999998765 4


Q ss_pred             eeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333           85 RKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK  143 (143)
Q Consensus        85 ~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~  143 (143)
                      .++||+||+|||++||+|+||+|||+|++|++.|+|++ +||++|++||+++.|.+||+
T Consensus        84 ~~~k~vfI~w~Pd~a~vk~KMlYASsk~~l~~~l~~~~-~i~a~d~~el~~e~i~~kl~  141 (144)
T 2lj8_A           84 PRDKLILISWNPDSGAPRTKMLYSSSRDALVPLTQGFQ-GIQANDASGLDFEEISRKVK  141 (144)
T ss_dssp             SEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTTTSE-EEECCGGGTSCHHHHHHHHH
T ss_pred             CcccEEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCee-EEEeCChHHCCHHHHHHHHh
Confidence            67899999999999999999999999999999999886 89999999999999999873

>1tvj_A Cofilin; ADF, actin binding protein, actin depolymerizing factor, actin-binding protein; NMR {Gallus gallus}

Probab=100.00  E-value=1.1e-42  Score=252.24  Aligned_cols=135  Identities=29%  Similarity=0.600  Sum_probs=124.4

Q ss_pred             cccCceeCHHHHHHHHHhhccC---------ceeEEEEEEeCCCcEEEEee--------cCCC-CCChHHHhhcCCCCCc
Q 032333            8 ATTGMWVADECKNSFMEMKWKK---------VHRYIVFKIDEKSKLVTVDK--------VGGA-GEGYEDLAASLPDDDC   69 (143)
Q Consensus         8 ~~sGi~is~e~~~a~~~lk~~~---------~~~~ii~~i~~~~~~i~l~~--------~~~~-~~~~~e~~~~l~~~~p   69 (143)
                      ++|||.+++||+++|++|+.++         .+||+||+|+++++.|++++        .++. ..+|++|.+.||+++|
T Consensus         1 m~SGi~vs~e~~~~f~~~k~~k~~~~~~~~~~~~~iifki~~~~~~iivee~~~~~~~~~~~~~~~~~~ef~~~L~~~~p   80 (166)
T 1tvj_A            1 MASGVTVNDEVIKVFNDMKVRKSSTPEEIKKRKKAVLFCLSDDKKQIIVEEAKQILVGDIGDTVEDPYTAFVKLLPLNDC   80 (166)
T ss_dssp             CCCCCEECHHHHHHHHHHHSCCCSCHHHHTTCEEEEEEEECTTSSEEEEEEEEEEETTTBTTTBSCHHHHHHHHCCTTSC
T ss_pred             CCCCCeeCHHHHHHHHHHhcCCCccccccccceeEEEEEECCCCcEEEEeccccccccccCccccCCHHHHHHhCCCCCc
Confidence            5799999999999999999885         48999999999888899886        3432 4689999999999999


Q ss_pred             eEEEEeeeeeecCCceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCC-CHHHHHhhhC
Q 032333           70 RYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEM-GFDVIMDRAK  143 (143)
Q Consensus        70 ry~~y~~~~~~~~~~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl-~~~~i~~k~~  143 (143)
                      ||++||++|.++++ .++||+||+|||++|++|+||+|||+|++|++.|+|++++||++|++|| +++.|.+||.
T Consensus        81 rY~vy~~~~~~~~~-~~~klvfI~W~Pd~a~vr~KMlYAssk~~lk~~l~gi~~~i~atd~~el~~~~~i~ekl~  154 (166)
T 1tvj_A           81 RYALYDATYETKES-KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKHEWQVNGLDDIKDRSTLGEKLG  154 (166)
T ss_dssp             EEEEEEEEEEESSC-EEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHTTTTCCCEEEESSGGGTCCHHHHHHHHT
T ss_pred             EEEEEeccccCCCC-CccCEEEEEECCCCCCHHHhhHHHHhHHHHHHHhcCCeEEEEECChHHcCCHHHHHHHhC
Confidence            99999999988775 8999999999999999999999999999999999999999999999999 9999999974

>1vkk_A GMF-gamma, GLIA maturation factor gamma; 15079298, structural GEN JCSG, protein structure initiative, PSI, joint center for S genomics; 1.35A {Mus musculus} SCOP: d.109.1.2 PDB: 1wfs_A 3l50_A

Probab=100.00  E-value=1.6e-42  Score=248.66  Aligned_cols=134  Identities=19%  Similarity=0.315  Sum_probs=124.2

Q ss_pred             ccccCceeCHHHHHHHHHhhccC--ceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCc
Q 032333            7 MATTGMWVADECKNSFMEMKWKK--VHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNC   84 (143)
Q Consensus         7 m~~sGi~is~e~~~a~~~lk~~~--~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~   84 (143)
                      .+.+|++++++|.++|++|+.++  +++||+|+|+.++++|+|+++++ +.+|+||.+.||+++|||++||+++++++|+
T Consensus        15 ~~~~~~~v~~e~~~a~~~lk~~k~~~~~~iifkId~~~~~I~v~~~~~-~~~~~e~~~~Lp~~~pRY~vy~~~~~~~~g~   93 (154)
T 1vkk_A           15 DSLVVCEVDPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDELQ-NISPEELKLELPERQPRFVVYSYKYVHDDGR   93 (154)
T ss_dssp             ---CCCEECHHHHHHHHHHHTCCCCSCEEEEEEEETTTTEEEEEEEEE-SCCHHHHHHHSCSSSCEEEEEECCEECTTSC
T ss_pred             ccccceeeCHHHHHHHHHHHhcccCCccEEEEEEcCCCCEEEEEEcCC-CCCHHHHHHhCCCCCcEEEEEEeeeccCCCc
Confidence            45689999999999999999874  68999999999888999998664 4689999999999999999999999998888


Q ss_pred             eeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhh
Q 032333           85 RKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRA  142 (143)
Q Consensus        85 ~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~  142 (143)
                      .++|++||+|||++|++|+||+|||+|++|++.| |++++|||+|++||+++.|.++|
T Consensus        94 ~~~klvFI~w~P~~a~vk~KMlYAssk~~l~~~l-gi~~~iea~d~~El~~e~i~~kl  150 (154)
T 1vkk_A           94 VSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTA-ELTKVFEIRTTDDLTETWLKEKL  150 (154)
T ss_dssp             EECCEEEEEECCTTSCHHHHHHHHHHHHHHHHHT-TCCCEEEESSGGGCCHHHHHHHH
T ss_pred             ccccEEEEEECCCCCChhhhhhhHhhHHHHHHhh-CceEEEEECChHhCCHHHHHHHH
Confidence            9999999999999999999999999999999999 89999999999999999999987

>1m4j_A A6 gene product, twinfilin; mixed beta-sheet, PAIR of alpha-helices, structural protein; 1.60A {Mus musculus} SCOP: d.109.1.2

Probab=100.00  E-value=1.1e-41  Score=241.23  Aligned_cols=130  Identities=25%  Similarity=0.427  Sum_probs=115.1

Q ss_pred             cccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCC----CChHHHhhcC-CCCCceEEEEeeeeeecC
Q 032333            8 ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAG----EGYEDLAASL-PDDDCRYAVFDFDFVTVD   82 (143)
Q Consensus         8 ~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~----~~~~e~~~~l-~~~~pry~~y~~~~~~~~   82 (143)
                      ++|||.+++||.++|++++.++ +||++|+|+++  +|+++++++.+    .+|++|++.| |+++|||++||+++.+.+
T Consensus         3 m~SGi~v~~e~~~~f~~~k~~k-~~~ii~~i~~~--~ivv~~~~~~~~~~~~~~~e~~~~l~~~~~~rY~~~~~~~~~~~   79 (142)
T 1m4j_A            3 HQTGIQASEDVKEIFARARNGK-YRLLKISIENE--QLVVGSCSPPSDSWEQDYDSFVLPLLEDKQPCYVLFRLDSQNAQ   79 (142)
T ss_dssp             ----CCBCHHHHHHHHHHHTTT-CSEEEEEECSS--SEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEETT
T ss_pred             CcCCCeECHHHHHHHHHHhcCC-eEEEEEEEcCC--EEEEEeecCCCccccccHHHHHHhhCCCCCceEEEEEcCcCCCC
Confidence            3799999999999999999987 99999999875  88898887654    3478999998 799999999999987754


Q ss_pred             CceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeE--EEEeCCCCCCCHHHHHhhhC
Q 032333           83 NCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHY--EVQATDPTEMGFDVIMDRAK  143 (143)
Q Consensus        83 ~~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~--~i~~~d~~dl~~~~i~~k~~  143 (143)
                         ++||+||+|||++||+|+||+|||||++|++.|+|++.  +|||+|++||+++.+.++++
T Consensus        80 ---~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~~~i~atd~~el~~~~i~~~l~  139 (142)
T 1m4j_A           80 ---GYEWIFIAWSPDHSHVRQKMLYAATRATLKKEFGGGHIKDEVFGTVKEDVSLHGYKKYLL  139 (142)
T ss_dssp             ---EEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGGEEEEEEESSHHHHSHHHHHHHHC
T ss_pred             ---CceEEEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCceeEEEEEeCChHHCCHHHHHHHHh
Confidence               59999999999999999999999999999999999777  99999999999999999874

>1ak6_A Destrin; actin depolymerization factor, actin-binding protein; NMR {Homo sapiens} SCOP: d.109.1.2 PDB: 1ak7_A 1q8g_A 1q8x_A 3j0s_M

Probab=100.00  E-value=2.3e-42  Score=252.26  Aligned_cols=136  Identities=32%  Similarity=0.643  Sum_probs=123.7

Q ss_pred             ccccCceeCHHHHHHHHHhhccC---------ceeEEEEEEeCCCcEEEEeec--------CCC-CCChHHHhhcCCCCC
Q 032333            7 MATTGMWVADECKNSFMEMKWKK---------VHRYIVFKIDEKSKLVTVDKV--------GGA-GEGYEDLAASLPDDD   68 (143)
Q Consensus         7 m~~sGi~is~e~~~a~~~lk~~~---------~~~~ii~~i~~~~~~i~l~~~--------~~~-~~~~~e~~~~l~~~~   68 (143)
                      +++|||.+++||+++|++++.++         .+|||||+|+++++.|++++.        |.. ..+|++|.+.||+++
T Consensus         9 ~m~SGi~vs~e~~~~f~~~k~~ks~~~~~~~~~~~~iifki~~~~~~Iivee~~~~~~~~~g~~~~~~~~ef~~~L~~~~   88 (174)
T 1ak6_A            9 NSASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDVGVTITDPFKHFVGMLPEKD   88 (174)
T ss_dssp             TTTTCCCCCSHHHHHHHHTSSSCCSSHHHHGGGCCCEECCCSTTSCSCCCCSSCCCCSSSTTTTCCSSSHHHHHTSCSSC
T ss_pred             cccCCCccCHHHHHHHHHHHcCCcccccccccceeEEEEEECCCCcEEEEeccccccccccCcccCCCHHHHHHhCCCCC
Confidence            35799999999999999999984         589999999988778888763        221 468999999999999


Q ss_pred             ceEEEEeeeeeecCCceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333           69 CRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK  143 (143)
Q Consensus        69 pry~~y~~~~~~~~~~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~  143 (143)
                      |||++||++|.+++| +++||+||+|||++|++|+||+|||+|++|++.|+|++++||++|++||+++.|.+||.
T Consensus        89 prY~ly~~~~~~~~~-~~~klvfI~W~Pd~a~vk~KMlYAssk~~lk~~l~gi~~~i~atd~~El~~e~i~~kl~  162 (174)
T 1ak6_A           89 CRYALYDASFETKES-RKEELMFFLWAPELAPLKSKMIYASSKDAIKKKFQGIKHECQANGPEDLNRACIAEKLG  162 (174)
T ss_dssp             CCCEECCCCCCCSSC-SCCCCCEEEECCSSSCHHHHHSHHHHHHHHHHHCTTCSCCEEESSTTTTCHHHHHHHTT
T ss_pred             cEEEEEeCcccCCCC-ccccEEEEEECCCCCCHHHhhHHHHHHHHHHHHhcCCeEEEEECChhhcCHHHHHHHhc
Confidence            999999999877775 89999999999999999999999999999999999999999999999999999999974

>1v6f_A MGMF-beta, GLIA maturation factor, beta; actin binding protein, cytoskeleton, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.109.1.2

Probab=100.00  E-value=1.5e-40  Score=237.64  Aligned_cols=132  Identities=20%  Similarity=0.352  Sum_probs=122.9

Q ss_pred             cCceeCHHHHHHHHHhhccC--ceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceee
Q 032333           10 TGMWVADECKNSFMEMKWKK--VHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKS   87 (143)
Q Consensus        10 sGi~is~e~~~a~~~lk~~~--~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~   87 (143)
                      ..++++++|.++|++|+.++  +++||+|+|+.++++|+|+++++ +.+|+||.+.||+++|||++||++|.+.+|+.++
T Consensus        12 ~~~~v~~e~~~a~~~lr~~k~~~~~~iifki~~~~~~I~v~~~~~-~~~~~el~~~Lp~~~prY~~~~~~~~~~~~~~~~   90 (151)
T 1v6f_A           12 VVCDVAEDLVEKLRKFRFRKETHNAAIIMKIDKDERLVVLDEELE-GVSPDELKDELPERQPRFIVYSYKYQHDDGRVSY   90 (151)
T ss_dssp             CCCEECHHHHHHHHHHHTCCCSSCEEEEEEECSSSCEEEEEEEEE-SCCHHHHGGGSCSSSCEEEEEECCEECTTSCEEC
T ss_pred             eEEEECHHHHHHHHHHHhccCCCccEEEEEEcCCCcEEEEEecCC-CCCHHHHHhhCCCCCceEEEEecccccCCCcccc
Confidence            34779999999999999975  58999999999888999998765 4689999999999999999999999998888999


Q ss_pred             eEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333           88 KIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK  143 (143)
Q Consensus        88 k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~  143 (143)
                      |++||+|||++|++|+||+|||+|.+|++.| |++++||++|++||+++.|.+||+
T Consensus        91 k~vfI~w~P~~a~vk~KMlYAssk~~l~~~l-gi~~~iea~d~~El~~~~i~~kl~  145 (151)
T 1v6f_A           91 PLCFIFSSPVGCKPEQQMMYAGSKNKLVQTA-ELTKVFEIRNTEDLTEEWLREKLG  145 (151)
T ss_dssp             CEEEEEECCTTSCHHHHHHHHHHHHHHHHHT-TCSEEEEESSGGGCCHHHHHHHHH
T ss_pred             cEEEEEECCCCCChHHheehHHHHHHHHHHh-CCeEEEEECChHHCCHHHHHHHHc
Confidence            9999999999999999999999999999999 899999999999999999999873

>2w0i_A Twinfilin-2; cytoskeleton, actin-binding, actin binding, cofilin-like, phosphoprotein, phosphorylation, transferase, protein tyros kinase-9; 1.8A {Homo sapiens}

Probab=100.00  E-value=2.7e-40  Score=232.29  Aligned_cols=128  Identities=20%  Similarity=0.351  Sum_probs=119.9

Q ss_pred             ceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeeeEEE
Q 032333           12 MWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFF   91 (143)
Q Consensus        12 i~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~vf   91 (143)
                      ++|+++|.++|++|+.++ ++||+|+|+.++++|+|++++  +.++++|.+.||+++|||++||+++++.+ +.++|++|
T Consensus         2 ~~v~~e~~~a~~~lk~~~-~~~ii~~id~~~~~I~v~~~~--~~~~~el~~~Lp~~~~rY~~y~~~~~~~~-~~~~k~vf   77 (135)
T 2w0i_A            2 MPLQPEAQRALQQLKQKM-VNYIQMKLDLERETIELVHTE--PTDVAQLPSRVPRDAARYHFFLYKHTHEG-DPLESVVF   77 (135)
T ss_dssp             CCBCHHHHHHHHHHHTTS-CSEEEEEEETTTTEEEEEECC--CCCGGGGGGGSCSSSCEEEEEEEEEEETT-EEEEEEEE
T ss_pred             cccCHHHHHHHHHHHcCC-CcEEEEEEeCCCCEEEEEecC--CCCHHHHHhhCCCCCcEEEEEecccccCC-CCCccEEE
Confidence            679999999999999987 999999999988899999876  47899999999999999999999998765 48999999


Q ss_pred             EEEcCC-CCCcchhhhhhhhHHHHHHhcC---Cee--EEEEeCCCCCCCHHHHHhhhC
Q 032333           92 IAWAPT-ASRIRAKMLYATSKDGLRRVLD---GIH--YEVQATDPTEMGFDVIMDRAK  143 (143)
Q Consensus        92 I~w~P~-~a~vk~KMlyassk~~l~~~l~---gi~--~~i~~~d~~dl~~~~i~~k~~  143 (143)
                      |+|||+ +|++|+||+|||+|+.|++.|.   |++  ++|||+|++||+++.|.++++
T Consensus        78 I~w~P~~~~~vk~kMlYassk~~l~~~l~~~~Gi~v~~~iea~d~~el~~~~i~~kl~  135 (135)
T 2w0i_A           78 IYSMPGYKCSIKERMLYSSCKSRLLDSVEQDFHLEIAKKIEIGDGAELTAEFLDDEVH  135 (135)
T ss_dssp             EEECCGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCGGGCCHHHHHHHHC
T ss_pred             EEECCCCCCCHHHHhHhHHhHHHHHHHHhhccCCceeEEEEcCChhhcCHHHHHHhhC
Confidence            999999 9999999999999999999998   866  999999999999999999985

>2vac_A Twinfilin-2; transferase, actin binding, phosphorylation, cofilin-like, cytoskeleton, actin-binding, protein tyrosine kinase-9; 1.70A {Homo sapiens}

Probab=100.00  E-value=9.7e-41  Score=234.20  Aligned_cols=126  Identities=21%  Similarity=0.393  Sum_probs=115.0

Q ss_pred             ccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCC----CChHHHhhcC-CCCCceEEEEeeeeeecCC
Q 032333            9 TTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAG----EGYEDLAASL-PDDDCRYAVFDFDFVTVDN   83 (143)
Q Consensus         9 ~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~----~~~~e~~~~l-~~~~pry~~y~~~~~~~~~   83 (143)
                      +|||.+++||.++|++++.++ +|||+|+|+++  +|++++.++..    .+|++|++.| |+++|||++||+++.+.+ 
T Consensus         1 ~SGi~v~~e~~~~f~~~k~~k-~r~ii~~i~~~--~ivv~~~~~~~~~~~~~~~~~~~~l~~~~~prY~v~~~~~~~~~-   76 (134)
T 2vac_A            1 SMGIHATEELKEFFAKARAGS-VRLIKVVIEDE--QLVLGASQEPVGRWDQDYDRAVLPLLDAQQPCYLLYRLDSQNAQ-   76 (134)
T ss_dssp             CCSCEECHHHHHHHHHHHHSS-CSEEEEEEETT--EEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEETT-
T ss_pred             CCCcEeCHHHHHHHHHHhcCC-eEEEEEEecCC--EEEEEeecCcCcccccCHHHHHHhcCCCCCCEEEEEECCcCCCC-
Confidence            699999999999999999988 99999999875  89999887654    2478999998 689999999999987764 


Q ss_pred             ceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeE--EEEeCCCCCCCHHHHHh
Q 032333           84 CRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHY--EVQATDPTEMGFDVIMD  140 (143)
Q Consensus        84 ~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~--~i~~~d~~dl~~~~i~~  140 (143)
                        ++||+||+|||++|++|+||+|||||++|++.|+|++.  +|||+|++||+++.+++
T Consensus        77 --~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~~~i~atd~~el~~~~~~~  133 (134)
T 2vac_A           77 --GFEWLFLAWSPDNSPVRLKMLYAATRATVKKEFGGGHIKDELFGTVKDDLSFAGYQK  133 (134)
T ss_dssp             --EEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGGEEEEEEESSHHHHSHHHHHH
T ss_pred             --CceEEEEEEcCCCCCHHHHhHHHHHHHHHHHHcCCCeeeEEEEeCChHHcCHHHHhc
Confidence              49999999999999999999999999999999999776  99999999999999875

>2d8b_A Twinfilin-1; cell-free protein synthesis, actin-binding protein, developmental regulation, cellular remodeling, cytoskeleton, morphology; NMR {Mus musculus}

Probab=100.00  E-value=1e-39  Score=236.55  Aligned_cols=132  Identities=20%  Similarity=0.390  Sum_probs=123.2

Q ss_pred             cccCce--eCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCce
Q 032333            8 ATTGMW--VADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCR   85 (143)
Q Consensus         8 ~~sGi~--is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~   85 (143)
                      +.||+.  ++++|.++|++|+.+ +++||+|+|+.++++|+|++++  ..+|++|.+.||+++|||++||+++.+.++ .
T Consensus        21 ~~sgv~~~v~~e~~~a~~~lk~~-~~~~vifkId~~~~~I~v~~~~--~~~~~el~~~Lp~~~pRY~~y~~~~~~~~~-~   96 (166)
T 2d8b_A           21 TLQGVAFPISRDAFQALEKLSKK-QLNYVQLEIDIKNETIILANTE--NTELRDLPKRIPKDSARYHFFLYKHSHEGD-Y   96 (166)
T ss_dssp             CSCCCCCCBCHHHHHHHHHHHTT-CCSCCEEEEETTTTEEEEEECC--CCCSTTHHHHSCSSCCEEEEEEEEEEETTE-E
T ss_pred             ccCCcccCcCHHHHHHHHHHHcC-CCcEEEEEEeCCCCEEEEEecC--CCCHHHHHHhCCCCCceEEEEeccccCCCC-c
Confidence            349999  999999999999998 5999999999988899999877  468999999999999999999999988765 6


Q ss_pred             eeeEEEEEEcCC-CCCcchhhhhhhhHHHHHHhcC---Ce--eEEEEeCCCCCCCHHHHHhhhC
Q 032333           86 KSKIFFIAWAPT-ASRIRAKMLYATSKDGLRRVLD---GI--HYEVQATDPTEMGFDVIMDRAK  143 (143)
Q Consensus        86 ~~k~vfI~w~P~-~a~vk~KMlyassk~~l~~~l~---gi--~~~i~~~d~~dl~~~~i~~k~~  143 (143)
                      ++|++||+|||+ +|++|+||+|||+|..|++.|.   |+  +++||++|++||+++.|.++|+
T Consensus        97 ~~k~vFI~w~P~~~~~ik~KMlYAssk~~l~~~l~~~~Gi~v~~~iea~d~~El~~~~i~~kl~  160 (166)
T 2d8b_A           97 LESVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIEIDNGDELTADFLYDEVH  160 (166)
T ss_dssp             EEEEEEEEECCCSSSCHHHHHHHHHTTHHHHHHHTTSSCCCCSEEEEESSSTTCCHHHHHHHHH
T ss_pred             cccEEEEEECCCCCCCHHHeeehhhhHHHHHHHHhhccCCceeEEEEeCChHHCCHHHHHHHhC
Confidence            999999999999 9999999999999999999999   87  8999999999999999999873

>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2

Probab=100.00  E-value=2.8e-39  Score=228.38  Aligned_cols=130  Identities=14%  Similarity=0.330  Sum_probs=118.2

Q ss_pred             ccccCceeC---HHHHHHHHHhhccC--ceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeec
Q 032333            7 MATTGMWVA---DECKNSFMEMKWKK--VHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTV   81 (143)
Q Consensus         7 m~~sGi~is---~e~~~a~~~lk~~~--~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~   81 (143)
                      |+.+||.++   ++|+++|++++.++  .+|||+|+|++ +++|+|+.+|+   +|+||.+.||+++|||++||++   .
T Consensus         1 ~~m~~i~l~~~~~e~~~a~~~~~~~~~~~~~~ii~~i~~-~~~i~v~~~g~---~~~el~~~l~~~~~rY~~~~~~---~   73 (141)
T 1hqz_1            1 MALEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNA-KKEYEPESTGS---SFHDFLQLFDETKVQYGLARVS---P   73 (141)
T ss_dssp             --CCCCCCSTTHHHHHHHHHHHHHTCCTTCCEEEEEECT-TSCEEEEEEES---CHHHHHTCCCTTSCEEEEEEEC---C
T ss_pred             CcccccccCCCCHHHHHHHHHHHhCCCCCceEEEEEEcC-CCEEEEEeecC---CHHHHHhhCCCCceEEEEEEEe---c
Confidence            567788884   99999999999984  69999999998 46899998875   8999999999999999999997   4


Q ss_pred             CCceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHH-hcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333           82 DNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRR-VLDGIHYEVQATDPTEMGFDVIMDRAK  143 (143)
Q Consensus        82 ~~~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~-~l~gi~~~i~~~d~~dl~~~~i~~k~~  143 (143)
                      +|+.++||+||+|||++|++|+||+|||+|++|++ .|+|++.+|++++++||+++.|.++++
T Consensus        74 ~~~~~~k~vfI~w~Pd~~~vk~Kmlyas~k~~l~~~~l~g~~~~i~a~~~~el~~e~i~~kl~  136 (141)
T 1hqz_1           74 PGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKIS  136 (141)
T ss_dssp             TTCSCCEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTSCSCSEEEEESSGGGGCHHHHHHHHH
T ss_pred             CCCceeeEEEEEECCCCCChhheEEEeccHHHHHHHhCCceEEEEEECChHHCCHHHHHHHHH
Confidence            57889999999999999999999999999999997 999999999999999999999999873

>3daw_B Twinfilin-1, protein A6; actin depolymerisation, actin binding proteins, cytoskeleton, structural protein/contractIle protein complex; HET: ATP; 2.55A {Mus musculus} PDB: 2hd7_A

Probab=100.00  E-value=2.7e-38  Score=228.68  Aligned_cols=132  Identities=20%  Similarity=0.382  Sum_probs=120.5

Q ss_pred             cccCc--eeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCce
Q 032333            8 ATTGM--WVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCR   85 (143)
Q Consensus         8 ~~sGi--~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~   85 (143)
                      +.+||  +|+++|.++|++|+.++ ++||+|+|+.++++|+|+++ . +.+|++|.+.||+++|||++|++++.++ |+.
T Consensus        16 ~~~gv~~~v~~e~~~a~~~lk~~~-~~~iifkId~~~e~I~v~~~-~-~~~~~df~~~Lp~~~pRY~vyd~~~~~~-g~~   91 (164)
T 3daw_B           16 TLQGVAFPISRDAFQALEKLSKKQ-LNYVQLEIDIKNETIILANT-E-NTELRDLPKRIPKDSARYHFFLYKHSHE-GDY   91 (164)
T ss_dssp             --CCCCCCBCHHHHHHHHHHHTTS-CSEEEEEEETTTTEEEEEEC-C-CCCGGGSGGGSCSSSCEEEEEEEEEEET-TEE
T ss_pred             ccCcceEEECHHHHHHHHHHHcCC-ceEEEEEEeCCCCEEEEEeC-C-CCCHHHHHHhCCccCceEEEEecccccC-CCc
Confidence            34777  69999999999999985 99999999998899999887 3 4799999999999999999999999776 666


Q ss_pred             eeeEEEEEEcCC-CCCcchhhhhhhhHHHHHHhcC---Ce--eEEEEeCCCCCCCHHHHHhhhC
Q 032333           86 KSKIFFIAWAPT-ASRIRAKMLYATSKDGLRRVLD---GI--HYEVQATDPTEMGFDVIMDRAK  143 (143)
Q Consensus        86 ~~k~vfI~w~P~-~a~vk~KMlyassk~~l~~~l~---gi--~~~i~~~d~~dl~~~~i~~k~~  143 (143)
                      ..+++||+|||+ +|++|+||+|||+|++|++.|.   |+  +++||++|++||+++.|.++|+
T Consensus        92 ~~~~ifi~~~P~~~a~ik~kMlYASsK~~l~~~l~~~~Gi~i~k~iea~d~~Elt~e~l~ekl~  155 (164)
T 3daw_B           92 LESVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIEIDNGDELTADFLYDEVH  155 (164)
T ss_dssp             EEEEEEEEECCSTTSCHHHHHHHHHTHHHHHHHHHHHHCCCEEEEEEESSSSSCCHHHHHHHHS
T ss_pred             cccEEEEEEcCCCCCCHHHHHHHHHhHHHHHHHHhhccCCceeEEEEeCChHHcCHHHHHhHhC
Confidence            788999999999 9999999999999999999998   77  8999999999999999999974

>3q2b_A Pfadf1, cofilin/actin-depolymerizing factor homolog 1; actin regulator, actin-binding protein; HET: TAR; 1.60A {Plasmodium falciparum} PDB: 2xf1_A

Probab=100.00  E-value=5.1e-40  Score=227.92  Aligned_cols=118  Identities=27%  Similarity=0.511  Sum_probs=106.7

Q ss_pred             cccccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCC---ceEEEEeeeeeecC
Q 032333            6 KMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDD---CRYAVFDFDFVTVD   82 (143)
Q Consensus         6 ~m~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~---pry~~y~~~~~~~~   82 (143)
                      ++++|||.+++||.++|++||.++++|||+|+|+++  +|+|+++++ ..+|++|.+.||+++   |||++||+      
T Consensus         1 ~~m~SGi~vs~e~~~~f~~lk~~k~~~~ii~kI~~~--~ivv~~~~~-~~~~~~f~~~Lp~~~~~~prY~vy~~------   71 (124)
T 3q2b_A            1 GSMISGIRVNDNCVTEFNNMKIRKTCGWIIFVIQNC--EIIIHSKGA-STTLTELVQSIDKNNEIQCAYVVFDA------   71 (124)
T ss_dssp             ---CCSCEECHHHHHHHHHHHHHTSSEEEEEEEETT--EEEEEEEEE-CSCHHHHHHHHHHCTTCSEEEEEEEC------
T ss_pred             CCCCCCCccCHHHHHHHHHHhcCCCcEEEEEEEcCC--EEEEeccCC-CCCHHHHHHHccccCCCCcEEEEEec------
Confidence            457899999999999999999987799999999974  898988876 478999999999999   99999997      


Q ss_pred             CceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCee-EEEEeCCCCCCCH
Q 032333           83 NCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIH-YEVQATDPTEMGF  135 (143)
Q Consensus        83 ~~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~-~~i~~~d~~dl~~  135 (143)
                         +++|+||+|||++|++|+||+|||+|++|++.|+|++ .+++++|++||++
T Consensus        72 ---~~k~vfI~w~Pd~a~vk~KMlYASsk~~l~~~l~g~~~~~i~a~d~~dlt~  122 (124)
T 3q2b_A           72 ---VSKIHFFMYARESSNSRDRMTYASSKQAILKKIEGVNVLTSVIESAQDVAD  122 (124)
T ss_dssp             ---SSCEEEEEEECTTSCHHHHHHHHHHHHHHHTTSTTSEECCSCBCSHHHHTT
T ss_pred             ---CCCEEEEEECCCCCChhHhhhhHHHHHHHHHHhCCCceEEEEecCHHHccc
Confidence               3699999999999999999999999999999999998 5899999999874

>2l72_A Tgadf, actin depolymerizing factor, putative; ADF/cofilin, actin binding, protein binding; NMR {Toxoplasma gondii}

Probab=100.00  E-value=1.5e-38  Score=224.43  Aligned_cols=116  Identities=34%  Similarity=0.678  Sum_probs=107.2

Q ss_pred             cccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceee
Q 032333            8 ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKS   87 (143)
Q Consensus         8 ~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~   87 (143)
                      ++|||++++||+++|++|+.++++|||+|+|+.  ++|+++++++ + +|++|.+.||+++|||++||      +|   +
T Consensus        22 m~sGi~vs~e~~~af~~lk~~k~~~~ii~~I~~--~eivv~~~g~-~-~~~el~~~Lp~~~prY~~y~------dg---~   88 (139)
T 2l72_A           22 MASGMGVDENCVARFNELKIRKTVKWIVFKIEN--TKIVVEKDGK-G-NADEFRGALPANDCRFGVYD------CG---N   88 (139)
T ss_dssp             CCTTCEECHHHHHHHHHHTTTTCCCEEEEEEET--TEEEEEEEES-S-HHHHHHHHCCCCSCCEEEEE------CS---S
T ss_pred             ccCCCCcCHHHHHHHHHHhCCCCeeEEEEEEcC--CEEEEeecCC-C-CHHHHHHhCCCCCcEEEEEc------CC---C
Confidence            589999999999999999998779999999998  5788988887 4 89999999999999999999      23   7


Q ss_pred             eEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEE-EEeCCCCCCCHH
Q 032333           88 KIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYE-VQATDPTEMGFD  136 (143)
Q Consensus        88 k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~-i~~~d~~dl~~~  136 (143)
                      ||+||+|||++|++|+||+|||+|++|++.|+|++.. +++++++||+++
T Consensus        89 k~vFI~w~Pd~a~vk~KMlYASsk~~lk~~l~g~~v~~iea~~~~DLte~  138 (139)
T 2l72_A           89 KIQFVLWCPDNAPVKPRMTYASSKDALLKKLDGATAVALEAHEMGDLAPL  138 (139)
T ss_dssp             CEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCSCCSCEEEESSTTTTSCC
T ss_pred             cEEEEEECCCCCChhHeeehHhhHHHHHHHhCCceEEEEEeCCHHHCccC
Confidence            9999999999999999999999999999999998765 999999999875

>1x67_A Drebrin-like protein; cell-free protein synthesis, actin-binding protein, SH3P7, MABP1, T-cell lymphocyte signaling and regulation; NMR {Homo sapiens}

Probab=100.00  E-value=7.1e-38  Score=222.59  Aligned_cols=131  Identities=18%  Similarity=0.301  Sum_probs=120.0

Q ss_pred             ccccCceeC-----HHHHHHHHHhhccC-ceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeee
Q 032333            7 MATTGMWVA-----DECKNSFMEMKWKK-VHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVT   80 (143)
Q Consensus         7 m~~sGi~is-----~e~~~a~~~lk~~~-~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~   80 (143)
                      .++||+.++     ++|+++|++++.++ .+||++|+|++++++|+|+.+|+  .+|+||.+.|++++|||++||++.  
T Consensus         3 ~~~~~m~~~l~~~~~e~~~a~~~v~~~~~~~~wi~~~i~~~~~~l~v~~~G~--~~~~e~~~~L~~~~~~Y~~~r~~~--   78 (146)
T 1x67_A            3 SGSSGMAANLSRNGPALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGE--GGLEEMVEELNSGKVMYAFCRVKD--   78 (146)
T ss_dssp             SSSSSSCCCCCTTHHHHHHHHHHHHCSSSSCSEEEEEESSSSSCEEEEEEES--SCHHHHHHHCCTTSEEEEEEEEEC--
T ss_pred             CcccceEEEcCCCCHHHHHHHHHHHcCCCCccEEEEEEeCCCcEEEEEeccC--CCHHHHHhhCCCCceEEEEEEEEc--
Confidence            356676665     99999999999986 59999999988777899998886  589999999999999999999973  


Q ss_pred             cCCceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhh
Q 032333           81 VDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRA  142 (143)
Q Consensus        81 ~~~~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~  142 (143)
                       +++.++||+||.||||++|+++||+||+++++|++.|+|+|.+||+++++||+++.|.+|+
T Consensus        79 -~~~~~~K~vfI~W~pd~a~v~~Km~yas~k~~lk~~l~g~~~ei~at~~~el~~~~i~~k~  139 (146)
T 1x67_A           79 -PNSGLPKFVLINWTGEGVNDVRKGACASHVSTMASFLKGAHVTINARAEEDVEPECIMEKV  139 (146)
T ss_dssp             -SSSCSEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTTEEEEECCCSGGGGCHHHHHHHH
T ss_pred             -CCCCeeeEEEEEECCCCCChhheeeehhhHHHHHHhcCCcEEEEEeCChHHCCHHHHHHHH
Confidence             4578999999999999999999999999999999999999999999999999999999987

>1t3y_A Coactosin-like protein; beta sheet, protein binding; 1.15A {Homo sapiens} SCOP: d.109.1.2 PDB: 1t2l_A 1t3x_A 1vfq_A 1tmw_A 1wnj_A 1udm_A 1wm4_A

Probab=100.00  E-value=2.5e-34  Score=203.27  Aligned_cols=122  Identities=18%  Similarity=0.283  Sum_probs=113.6

Q ss_pred             CHHHHHHHHHhhccC-ceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeeeEEEEE
Q 032333           15 ADECKNSFMEMKWKK-VHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIA   93 (143)
Q Consensus        15 s~e~~~a~~~lk~~~-~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~vfI~   93 (143)
                      +++|.++|++++.++ .++|++|+++++  +|+|+.+|+   +|+||.+.||+++|||++||+. ..++++.++|++||.
T Consensus         6 ~~~~~~a~~~v~~~~~~~~wilf~~~~~--~i~v~~~G~---g~~e~~~~L~~~~~~Ya~~r~~-~~~~~~~~~K~vfI~   79 (141)
T 1t3y_A            6 KEACRAAYNLVRDDGSAVIWVTFKYDGS--TIVPGEQGA---EYQHFIQQCTDDVRLFAFVRFT-TGDAMSKRSKFALIT   79 (141)
T ss_dssp             HHHHHHHHHHHHCTTSSCCEEEEEEETT--EEEEEEEES---SHHHHHHHCCTTCEEEEEEEEE-ECSGGGCEEEEEEEE
T ss_pred             hHHHHHHHHHHHcCCCCceEEEEEEcCC--EEEEEecCC---CHHHHHhhCCCCceEEEEEEEE-ecCCCCceeeEEEEE
Confidence            689999999999976 599999999884  599999887   4999999999999999999996 455678999999999


Q ss_pred             EcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhh
Q 032333           94 WAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRA  142 (143)
Q Consensus        94 w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~  142 (143)
                      |||++++++.||+||++++.|++.|.|++.+||++|++||+++.|.+|+
T Consensus        80 W~pd~~~~~~K~~~as~k~~vk~~l~g~~~~i~a~d~~el~~~~I~~kv  128 (141)
T 1t3y_A           80 WIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIKSEL  128 (141)
T ss_dssp             EECTTSCHHHHHHHHHHHHHHTTTSCCCSEEEEECSGGGGSHHHHHHHH
T ss_pred             ECCCCCCHHHhhhHHHHHHHHHHHhcccEEEEEeCChHHCCHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999987

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	143
d1f7sa_	124	d.109.1.2 (A:) Cofilin (actin depolymerizing facto	4e-49
d1cnua_	134	d.109.1.2 (A:) Cofilin (actin depolymerizing facto	6e-47
d1cfya_	133	d.109.1.2 (A:) Cofilin (actin depolymerizing facto	3e-41
d1ak7a_	174	d.109.1.2 (A:) Destrin {Human and pig (Homo sapien	2e-40
d1vkka_	137	d.109.1.2 (A:) Glia maturation factor gamma, GMF-g	3e-37
d1q8ga_	166	d.109.1.2 (A:) Cofilin (actin depolymerizing facto	1e-36
d1m4ja_	133	d.109.1.2 (A:) Adf-H domain of twinfilin isoform-1	2e-30
d1t3ya1	130	d.109.1.2 (A:2-131) Coactosin-like protein Cotl1 (	7e-30
d1hqz1_	139	d.109.1.2 (1:) Cofilin-like domain of actin-bindin	3e-26

>d1f7sa_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Plant (Arabidopsis thaliana), ADF1 [TaxId: 3702]} Length = 124

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Plant (Arabidopsis thaliana), ADF1 [TaxId: 3702]

 Score =  151 bits (383), Expect = 4e-49
 Identities = 74/122 (60%), Positives = 97/122 (79%)

Query: 11  GMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCR 70
           GM V D+CK  F+E+K K+ HR+IV+KI+EK K V V+KVG   + YE+ AA LP D+CR
Sbjct: 3   GMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECR 62

Query: 71  YAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDP 130
           YA++DFDFVT +NC+KSKIFFIAW P  +++R+KM+YA+SKD  +R LDGI  E+QATDP
Sbjct: 63  YAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDP 122

Query: 131 TE 132
           TE
Sbjct: 123 TE 124

>d1cnua_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Acanthamoeba castellanii, actophorin [TaxId: 5755]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Acanthamoeba castellanii, actophorin [TaxId: 5755]

 Score =  146 bits (370), Expect = 6e-47
 Identities = 58/133 (43%), Positives = 88/133 (66%), Gaps = 1/133 (0%)

Query: 11  GMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCR 70
           G+ V+D+C   F E+K    HRY+ FK++  +  V V+ VGG    YED  + LP+ DCR
Sbjct: 1   GIAVSDDCVQKFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCR 60

Query: 71  YAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDP 130
           YA+FD++F   D  +++KI FI WAP ++ I++KM+Y ++KD +++ L GI  EVQATD 
Sbjct: 61  YAIFDYEFQV-DGGQRNKITFILWAPDSAPIKSKMMYTSTKDSIKKKLVGIQVEVQATDA 119

Query: 131 TEMGFDVIMDRAK 143
            E+  D + +RAK
Sbjct: 120 AEISEDAVSERAK 132

>d1cfya_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 133

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  131 bits (332), Expect = 3e-41
 Identities = 45/131 (34%), Positives = 83/131 (63%), Gaps = 2/131 (1%)

Query: 14  VADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAV 73
           VADE   +F ++K  K +++I+F +++    + V +       Y+     LP++DC YA+
Sbjct: 3   VADESLTAFNDLKLGKKYKFILFGLNDAKTEIVVKE-TSTDPSYDAFLEKLPENDCLYAI 61

Query: 74  FDFDF-VTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTE 132
           +DF++ +  +  ++SKI F  W+P  + +R+KM+YA+SKD LRR L+G+  +VQ TD +E
Sbjct: 62  YDFEYEINGNEGKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRALNGVSTDVQGTDFSE 121

Query: 133 MGFDVIMDRAK 143
           + +D +++R  
Sbjct: 122 VSYDSVLERVS 132

>d1ak7a_ d.109.1.2 (A:) Destrin {Human and pig (Homo sapiens) and (Sus scrofa) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Destrin
species: Human and pig (Homo sapiens) and (Sus scrofa) [TaxId: 9606]

 Score =  131 bits (331), Expect = 2e-40
 Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 19/152 (12%)

Query: 8   ATTGMWVADECKNSFMEMK---------WKKVHRYIVFKIDEKSKLVTVDKVGGAGEG-- 56
           + +G+ VADE    F +MK          KK  + ++F +    K + V++      G  
Sbjct: 10  SASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDV 69

Query: 57  -------YEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYAT 109
                  ++     LP+ DCRYA++D  F T    RK ++ F  WAP  + +++KM+YA+
Sbjct: 70  GVTITDPFKHFVGMLPEKDCRYALYDASFET-KESRKEELMFFLWAPELAPLKSKMIYAS 128

Query: 110 SKDGLRRVLDGIHYEVQATDPTEMGFDVIMDR 141
           SKD +++   GI +E QA  P ++    I ++
Sbjct: 129 SKDAIKKKFQGIKHECQANGPEDLNRACIAEK 160

>d1vkka_ d.109.1.2 (A:) Glia maturation factor gamma, GMF-gamma {Mouse (Mus musculus) [TaxId: 10090]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Glia maturation factor gamma, GMF-gamma
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  121 bits (306), Expect = 3e-37
 Identities = 25/130 (19%), Positives = 58/130 (44%), Gaps = 4/130 (3%)

Query: 14  VADECKNSFMEMKWKK--VHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRY 71
           V  E K +  + +++K   +  I+ K+D+  ++V ++         E+L   LP+   R+
Sbjct: 5   VDPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLED-ELQNISPEELKLELPERQPRF 63

Query: 72  AVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPT 131
            V+ + +V  D      + FI  +P   +   +M+YA SK+ L +    +    +     
Sbjct: 64  VVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTA-ELTKVFEIRTTD 122

Query: 132 EMGFDVIMDR 141
           ++    + ++
Sbjct: 123 DLTETWLKEK 132

>d1q8ga_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Human (Homo sapiens), non-muscle isoform [TaxId: 9606]} Length = 166

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Human (Homo sapiens), non-muscle isoform [TaxId: 9606]

 Score =  121 bits (305), Expect = 1e-36
 Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 20/154 (12%)

Query: 7   MATTGMWVADECKNSFMEMK---------WKKVHRYIVFKIDEKSKLVTVDKV------- 50
           MA+ G+ V+D     F +MK          KK  + ++F + E  K + +++        
Sbjct: 1   MAS-GVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGD 59

Query: 51  --GGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYA 108
                 + Y      LPD DCRYA++D  + T ++ +   + FI WAP ++ +++KM+YA
Sbjct: 60  VGQTVDDPYATFVKMLPDKDCRYALYDATYETKESKK-EDLVFIFWAPESAPLKSKMIYA 118

Query: 109 TSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRA 142
           +SKD +++ L GI +E+QA    E+     +   
Sbjct: 119 SSKDAIKKKLTGIKHELQANCYEEVKDRCTLAEK 152

>d1m4ja_ d.109.1.2 (A:) Adf-H domain of twinfilin isoform-1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 133

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Adf-H domain of twinfilin isoform-1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  104 bits (260), Expect = 2e-30
 Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 13/132 (9%)

Query: 14  VADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYED-----LAASLPDDD 68
            +++ K  F   +     +Y + KI  +++ + V       + +E      +   L D  
Sbjct: 3   ASEDVKEIFARAR---NGKYRLLKISIENEQLVVGSCSPPSDSWEQDYDSFVLPLLEDKQ 59

Query: 69  CRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHY--EVQ 126
             Y +F  D     N +  +  FIAW+P  S +R KMLYA ++  L++   G H   EV 
Sbjct: 60  PCYVLFRLDS---QNAQGYEWIFIAWSPDHSHVRQKMLYAATRATLKKEFGGGHIKDEVF 116

Query: 127 ATDPTEMGFDVI 138
            T   ++     
Sbjct: 117 GTVKEDVSLHGY 128

>d1t3ya1 d.109.1.2 (A:2-131) Coactosin-like protein Cotl1 (Clp) {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Coactosin-like protein Cotl1 (Clp)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (257), Expect = 7e-30
 Identities = 24/129 (18%), Positives = 44/129 (34%), Gaps = 7/129 (5%)

Query: 16  DECKNSFMEMKWKKV-HRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVF 74
           + C+ ++  ++       ++ FK D  + +      G  G  Y+       DD   +A  
Sbjct: 7   EACRAAYNLVRDDGSAVIWVTFKYDGSTIVP-----GEQGAEYQHFIQQCTDDVRLFAFV 61

Query: 75  DFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMG 134
            F        ++SK   I W         +    T K  ++ V+     E   +D  E+ 
Sbjct: 62  RFTT-GDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELE 120

Query: 135 FDVIMDRAK 143
            D I    K
Sbjct: 121 EDFIKSELK 129

>d1hqz1_ d.109.1.2 (1:) Cofilin-like domain of actin-binding protein abp1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin-like domain of actin-binding protein abp1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 93.7 bits (233), Expect = 3e-26
 Identities = 15/112 (13%), Positives = 41/112 (36%), Gaps = 8/112 (7%)

Query: 31  HRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIF 90
             +++   + K +     +    G  + D      +   +Y +              KI 
Sbjct: 28  TTWLIISPNAKKEY----EPESTGSSFHDFLQLFDETKVQYGLARVSP---PGSDVEKII 80

Query: 91  FIAWAPTASRIRAKMLYATSKDGL-RRVLDGIHYEVQATDPTEMGFDVIMDR 141
            I W P ++ ++ +  +A +   +   +  G H +V A D  ++  + ++ +
Sbjct: 81  IIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMK 132

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	143
d1f7sa_	124	Cofilin (actin depolymerizing factor, ADF) {Plant	100.0
d1cnua_	134	Cofilin (actin depolymerizing factor, ADF) {Acanth	100.0
d1cfya_	133	Cofilin (actin depolymerizing factor, ADF) {Baker'	100.0
d1ak7a_	174	Destrin {Human and pig (Homo sapiens) and (Sus scr	100.0
d1vkka_	137	Glia maturation factor gamma, GMF-gamma {Mouse (Mu	100.0
d1q8ga_	166	Cofilin (actin depolymerizing factor, ADF) {Human	100.0
d1m4ja_	133	Adf-H domain of twinfilin isoform-1 {Mouse (Mus mu	100.0
d1t3ya1	130	Coactosin-like protein Cotl1 (Clp) {Human (Homo sa	100.0
d1hqz1_	139	Cofilin-like domain of actin-binding protein abp1p	100.0
d3cipg1	124	Gelsolin {Human (Homo sapiens) [TaxId: 9606]}	82.02

>d1f7sa_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Plant (Arabidopsis thaliana), ADF1 [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Plant (Arabidopsis thaliana), ADF1 [TaxId: 3702]

Probab=100.00  E-value=3.1e-43  Score=242.28  Aligned_cols=124  Identities=60%  Similarity=1.067  Sum_probs=119.1

Q ss_pred             ccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeee
Q 032333            9 TTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSK   88 (143)
Q Consensus         9 ~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k   88 (143)
                      +|||++++||+++|++||.++.+||++|+|+.++++|+|+++++...+|++|.+.||+++|||++|++.+.+.+|+.++|
T Consensus         1 aSGi~v~de~~~~f~~lk~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~~ry~~~~~~~~~~~~~~~~k   80 (124)
T d1f7sa_           1 ASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENCQKSK   80 (124)
T ss_dssp             CCCCEECHHHHHHHHHHHHHCCCSEEEEEEETTTTEEEEEEECCSSCCHHHHHTTSCTTSCEEEEEEEEEECTTSCEEEE
T ss_pred             CCCeEeCHHHHHHHHHHhcCCCceEEEEEEeCCCcEEEEEecCCCCCCHHHHHHhCCcCCceEEEEEEEEecCCCCcccc
Confidence            59999999999999999998889999999999988999999988778999999999999999999999999999999999


Q ss_pred             EEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCC
Q 032333           89 IFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTE  132 (143)
Q Consensus        89 ~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~d  132 (143)
                      |+||+|||++||+|.||+|||+|.+|++.|+|++++|||+|++|
T Consensus        81 ~vfI~w~Pd~a~vk~KMlyAssk~~l~~~l~gi~~~i~a~d~~E  124 (124)
T d1f7sa_          81 IFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTE  124 (124)
T ss_dssp             EEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCCEEEEECCTTC
T ss_pred             EEEEEECCCCCCHhHeeeeHhHHHHHHHHhcCccEEEEeCCCCC
Confidence            99999999999999999999999999999999999999999986

>d1cnua_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Acanthamoeba castellanii, actophorin [TaxId: 5755]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Acanthamoeba castellanii, actophorin [TaxId: 5755]

Probab=100.00  E-value=8.4e-43  Score=243.04  Aligned_cols=132  Identities=44%  Similarity=0.858  Sum_probs=125.3

Q ss_pred             CceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeeeEE
Q 032333           11 GMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIF   90 (143)
Q Consensus        11 Gi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~v   90 (143)
                      ||.+++||.++|++|+.+++++|+||+|+.++++|++++++++..+|++|.+.||+++|||++|++.+.+ +++.++|++
T Consensus         1 Gi~v~~e~~~a~~~lk~~~~~~~vi~~I~~~~~~i~v~~~~~~~~~~~e~~~~l~~~~~ry~~~~~~~~~-~~~~~~k~v   79 (134)
T d1cnua_           1 GIAVSDDCVQKFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCRYAIFDYEFQV-DGGQRNKIT   79 (134)
T ss_dssp             CCEECHHHHHHHHHHHHHCCCSEEEEEECTTSSEEEEEEECCTTCCHHHHHTTSCTTSCEEEEEEEEEEE-TTEEEEEEE
T ss_pred             CceeCHHHHHHHHHHhcCCCeEEEEEEEeCCCeEEEEEecCCCCCCHHHHHHhCCCCCceEEEEEeeecC-CCCCceeEE
Confidence            8999999999999999988899999999998889999988877789999999999999999999999876 567889999


Q ss_pred             EEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333           91 FIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK  143 (143)
Q Consensus        91 fI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~  143 (143)
                      ||+|||++||+|.||+|||++.+|++.|+|+++.++++|.+||+++.|.+|++
T Consensus        80 fI~w~P~~a~~k~Km~yassk~~l~~~l~gi~~~i~~~d~~dL~~~~i~~kl~  132 (134)
T d1cnua_          80 FILWAPDSAPIKSKMMYTSTKDSIKKKLVGIQVEVQATDAAEISEDAVSERAK  132 (134)
T ss_dssp             EEEECCTTSCHHHHHHHHHHHHHHHHHSTTCCEEEEECSTTTTSHHHHHHHHT
T ss_pred             EEEECCCCCChhheEEeeccHHHHhhhccCceEEEEeCChHHCCHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999984

>d1cfya_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.7e-41  Score=234.87  Aligned_cols=130  Identities=35%  Similarity=0.731  Sum_probs=120.8

Q ss_pred             ceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecC-CceeeeEE
Q 032333           12 MWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVD-NCRKSKIF   90 (143)
Q Consensus        12 i~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~-~~~~~k~v   90 (143)
                      |.|++||++||++|+.++++|||+|+|+++++.++++.++. +.+|++|++.||+++|||++|++++.+++ ++.++|++
T Consensus         1 i~vs~e~~~a~~~lk~~k~~~~vi~~i~~~~~~vv~~~~~~-~~~~~~~~~~l~~~~pry~v~~~~~~~~~~~~~~~k~v   79 (133)
T d1cfya_           1 VAVADESLTAFNDLKLGKKYKFILFGLNDAKTEIVVKETST-DPSYDAFLEKLPENDCLYAIYDFEYEINGNEGKRSKIV   79 (133)
T ss_dssp             CEECHHHHHHHHHHHHHCCCSEEEEEECTTSSEEEEEEEEC-CCCHHHHHTTSCTTCCEEEEEEEEEECSSSCCEEEEEE
T ss_pred             CccCHHHHHHHHHHHcCCCeEEEEEEEcCCceEEEEecCCC-CCCHHHHHHhCCccCceEEEEEeeeecccCCCCcccEE
Confidence            67999999999999998889999999998888888877665 57899999999999999999999987655 46789999


Q ss_pred             EEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhh
Q 032333           91 FIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRA  142 (143)
Q Consensus        91 fI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~  142 (143)
                      ||+|||++||+|.||+|||++.+|++.|+|++..++++|++||+++.|.+||
T Consensus        80 fI~w~Pd~a~vk~Km~yassk~~l~~~l~gi~~~i~~~d~~dl~~e~i~~kl  131 (133)
T d1cfya_          80 FFTWSPDTAPVRSKMVYASSKDALRRALNGVSTDVQGTDFSEVSYDSVLERV  131 (133)
T ss_dssp             EEEECCTTSCHHHHHHHHHHHHHHHHHCTTCCEEEEESSGGGGSHHHHHHHH
T ss_pred             EEEECCCCCCHHHheehHhhHHHHHHhccCceEEEEECChHHCCHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999999987

>d1ak7a_ d.109.1.2 (A:) Destrin {Human and pig (Homo sapiens) and (Sus scrofa) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Destrin
species: Human and pig (Homo sapiens) and (Sus scrofa) [TaxId: 9606]

Probab=100.00  E-value=5.1e-41  Score=243.34  Aligned_cols=137  Identities=31%  Similarity=0.613  Sum_probs=123.9

Q ss_pred             ccccccCceeCHHHHHHHHHhhcc---------CceeEEEEEEeCCCcEEEEeecCC---------CCCChHHHhhcCCC
Q 032333            5 FKMATTGMWVADECKNSFMEMKWK---------KVHRYIVFKIDEKSKLVTVDKVGG---------AGEGYEDLAASLPD   66 (143)
Q Consensus         5 ~~m~~sGi~is~e~~~a~~~lk~~---------~~~~~ii~~i~~~~~~i~l~~~~~---------~~~~~~e~~~~l~~   66 (143)
                      -+.++|||.+++||.++|++||.+         +.+|||+|+|+.++++|++++..+         ..+.|++|++.||+
T Consensus         7 ~~ss~SGI~v~de~~~~f~elK~~~~~~~~~~kk~~r~ii~kI~~~~~~Iv~~~~~~~~~~~~~~~~~~~~~d~~~~l~~   86 (174)
T d1ak7a_           7 SGNSASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDVGVTITDPFKHFVGMLPE   86 (174)
T ss_dssp             SSSTTCCCCCCSSHHHHTTSSSSTTCSSHHHHTTSCCEEEECCCSSSCSSCCCSSCCCCSSSTTTTCCSSSHHHHHHSCS
T ss_pred             cCcCCCCcEeCHHHHHHHHHHhhccccchhhhccceeEEEEEEcCCCeEEEEeccccccccccccccchhHHHHHHhCCC
Confidence            456889999999999999999875         358999999999888888876543         23679999999999


Q ss_pred             CCceEEEEeeeeeecCCceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhh
Q 032333           67 DDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRA  142 (143)
Q Consensus        67 ~~pry~~y~~~~~~~~~~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~  142 (143)
                      ++|||++||+++.+.+ +.++|++||+|||++||+|.||+|||++.+|++.|+|++++||++|++||+++.|.++|
T Consensus        87 ~~prY~vyd~~~~~~~-~~~~k~vfI~w~Pd~a~vk~KMlYassk~~lk~~l~g~~~~i~a~d~~dl~~~~i~~kl  161 (174)
T d1ak7a_          87 KDCRYALYDASFETKE-SRKEELMFFLWAPELAPLKSKMIYASSKDAIKKKFQGIKHECQANGPEDLNRACIAEKL  161 (174)
T ss_dssp             SSCCEEEECCCCCBSS-CSCCCCCCEEECCSSSCGGGTTTHHHHHHHHHHHCSCCSCCEEESSTTTTCHHHHHHHT
T ss_pred             CCceEEEEEeeccCCC-CCcccEEEEEeCCCCCChhHhhhhHhhHHHHHHHhcCeeEEEEeCChHHCCHHHHHHHH
Confidence            9999999999987654 56789999999999999999999999999999999999999999999999999999987

>d1vkka_ d.109.1.2 (A:) Glia maturation factor gamma, GMF-gamma {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Glia maturation factor gamma, GMF-gamma
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.6e-39  Score=226.16  Aligned_cols=129  Identities=19%  Similarity=0.327  Sum_probs=119.2

Q ss_pred             ceeCHHHHHHHHHhhcc--CceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeeeE
Q 032333           12 MWVADECKNSFMEMKWK--KVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKI   89 (143)
Q Consensus        12 i~is~e~~~a~~~lk~~--~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~   89 (143)
                      +.|++||.++|++|+.+  ++++||+|+|+.++++|+++++.. +.++++|.+.||+++|||++|++++.+.+|+.++++
T Consensus         3 ~~v~~e~~~~l~~~k~~~~~~~~~ii~~Id~~~~~iv~~~~~~-~~~~~~~~~~lp~~~prY~vy~~~~~~~~g~~~~k~   81 (137)
T d1vkka_           3 CEVDPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDELQ-NISPEELKLELPERQPRFVVYSYKYVHDDGRVSYPL   81 (137)
T ss_dssp             CEECHHHHHHHHHHHTCCCCSCEEEEEEEETTTTEEEEEEEEE-SCCHHHHHHHSCSSSCEEEEEECCEECTTSCEECCE
T ss_pred             EEcCHHHHHHHHHHHhccCCCCCEEEEEECCCceEEEEEecCC-CCCHHHHHhhCCCCCcEEEEEEcccccCCCCccccE
Confidence            57999999999999864  368999999999988999887765 578999999999999999999999999999999999


Q ss_pred             EEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhh
Q 032333           90 FFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRA  142 (143)
Q Consensus        90 vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~  142 (143)
                      +||+|||++|++|+||+|||++.+|++.+++ .+.+|++|.+||+++.+.+||
T Consensus        82 vfi~w~Pd~a~ik~kMlYassk~~l~~~l~~-~k~ie~~d~del~~e~l~ekl  133 (137)
T d1vkka_          82 CFIFSSPVGCKPEQQMMYAGSKNRLVQTAEL-TKVFEIRTTDDLTETWLKEKL  133 (137)
T ss_dssp             EEEEECCTTSCHHHHHHHHHHHHHHHHHTTC-CCEEEESSGGGCCHHHHHHHH
T ss_pred             EEEEECCCCCChHHhhhhHHHHHHHHHHhCC-eEEEEeCChHHcCHHHHHHHh
Confidence            9999999999999999999999999999965 457999999999999999987

>d1q8ga_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Human (Homo sapiens), non-muscle isoform [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Human (Homo sapiens), non-muscle isoform [TaxId: 9606]

Probab=100.00  E-value=1.2e-39  Score=234.52  Aligned_cols=134  Identities=31%  Similarity=0.588  Sum_probs=118.6

Q ss_pred             cccCceeCHHHHHHHHHhhcc---------CceeEEEEEEeCCCcEEEEeecCC---------CCCChHHHhhcCCCCCc
Q 032333            8 ATTGMWVADECKNSFMEMKWK---------KVHRYIVFKIDEKSKLVTVDKVGG---------AGEGYEDLAASLPDDDC   69 (143)
Q Consensus         8 ~~sGi~is~e~~~a~~~lk~~---------~~~~~ii~~i~~~~~~i~l~~~~~---------~~~~~~e~~~~l~~~~p   69 (143)
                      ++|||.++++|+++|++||.+         +.++|+||+|+.+.+.|++++..+         ...+|++|.+.||+++|
T Consensus         1 MsSGi~vs~e~~~~f~~lK~~~~~~~~~~~~~~~~vi~kI~~~~~~Ivv~~~~e~~~~~~~~~~~~~~~e~~~~l~~~~p   80 (166)
T d1q8ga_           1 MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYATFVKMLPDKDC   80 (166)
T ss_dssp             CCSCCCCCSHHHHHHHHHHHCCCCSHHHHTSCEEEEEEEECSSSSCEEEEEEEEEESGGGTTTCSCHHHHHHHTCCTTSC
T ss_pred             CCCCcCcCHHHHHHHHHHHhccccchhhhccccceEEEEEcCCCcEEEEecccccccccccccccchHHHHHHhCCCCCc
Confidence            359999999999999999864         258999999999888888875432         24568999999999999


Q ss_pred             eEEEEeeeeeecCCceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHH-HHhhh
Q 032333           70 RYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDV-IMDRA  142 (143)
Q Consensus        70 ry~~y~~~~~~~~~~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~-i~~k~  142 (143)
                      ||++||+++.+.+| .++|||||+|||++|++|.||+|||++.+|++.|+|+++.||++|.+||+++. +.+|+
T Consensus        81 rY~v~d~~~~~~~~-~~~klvfi~w~Pd~a~ik~KMlYassk~~l~~~l~g~~~~i~a~d~~el~~~~~~~ekl  153 (166)
T d1q8ga_          81 RYALYDATYETKES-KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKLTGIKHELQANCYEEVKDRCTLAEKL  153 (166)
T ss_dssp             BCCCEECCEEBSSC-EECCEEEEEECCTTSCGGGTHHHHHHHHHHHHHHTSCSEEEEESSHHHHSCHHHHTTTT
T ss_pred             EEEEEEeecccCCC-CcccEEEEEEcCCCCChhheeeeHhhHHHHHHHhcCccEEEEeCChHHhChhHHHHHHh
Confidence            99999999988765 67999999999999999999999999999999999999999999999999877 55554

>d1m4ja_ d.109.1.2 (A:) Adf-H domain of twinfilin isoform-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Adf-H domain of twinfilin isoform-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.4e-36  Score=208.23  Aligned_cols=125  Identities=24%  Similarity=0.442  Sum_probs=107.8

Q ss_pred             ceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCC----hHHHh-hcCCCCCceEEEEeeeeeecCCcee
Q 032333           12 MWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEG----YEDLA-ASLPDDDCRYAVFDFDFVTVDNCRK   86 (143)
Q Consensus        12 i~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~----~~e~~-~~l~~~~pry~~y~~~~~~~~~~~~   86 (143)
                      |++++||.++|++++.+   +|++|+++.++++|+|+++++...+    +++++ +.+++++|||++||+++.+.   .+
T Consensus         1 I~~s~e~~~~f~~~k~~---~~~~~~i~~~~~~ivv~~~~~~~~~~~~~~~~~l~~~l~~~~prY~~~~~~~~~~---~~   74 (133)
T d1m4ja_           1 IQASEDVKEIFARARNG---KYRLLKISIENEQLVVGSCSPPSDSWEQDYDSFVLPLLEDKQPCYVLFRLDSQNA---QG   74 (133)
T ss_dssp             CCBCHHHHHHHHHHHTT---TCSEEEEEECSSSEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEET---TE
T ss_pred             CCcCHHHHHHHHhccCC---CEEEEEEEeCCcEEEEEEecCCCccchhhHHHHHhhcCCCCCcEEEEEEecCCCC---Cc
Confidence            67899999999999865   4777788777779999988765444    44544 55788999999999997654   46


Q ss_pred             eeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCC--eeEEEEeCCCCCCCHHHHHhhh
Q 032333           87 SKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG--IHYEVQATDPTEMGFDVIMDRA  142 (143)
Q Consensus        87 ~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~g--i~~~i~~~d~~dl~~~~i~~k~  142 (143)
                      +||+||+|||++||+|+||+|||||.+|++.|+|  ++++||+++++||++++++++|
T Consensus        75 ~k~vfI~w~Pd~a~vk~KMlyASsk~~l~~~l~g~~i~~~i~a~~~~dl~~~~~~~~l  132 (133)
T d1m4ja_          75 YEWIFIAWSPDHSHVRQKMLYAATRATLKKEFGGGHIKDEVFGTVKEDVSLHGYKKYL  132 (133)
T ss_dssp             EEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGGEEEEEEESSHHHHSHHHHHHHH
T ss_pred             ceEEEEEECCCCCCHHHHHHHHHHHHHHHHHcCCceEEEEEEeCChHHCCHHHHHHhh
Confidence            8999999999999999999999999999999998  7789999999999999999876

>d1t3ya1 d.109.1.2 (A:2-131) Coactosin-like protein Cotl1 (Clp) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Coactosin-like protein Cotl1 (Clp)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-34  Score=200.01  Aligned_cols=125  Identities=19%  Similarity=0.282  Sum_probs=111.4

Q ss_pred             eeCHH-HHHHHHHhhccC-ceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeeeEE
Q 032333           13 WVADE-CKNSFMEMKWKK-VHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIF   90 (143)
Q Consensus        13 ~is~e-~~~a~~~lk~~~-~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~v   90 (143)
                      ++++| |+++|++++.++ .++|++|+++++  .+++.+++   .+|+||.+.||+++|||++||+.+.. +++.++|+|
T Consensus         3 ~vd~e~~~~a~~~vr~~~~~~~w~if~~d~~--~~v~~~~~---~~~~e~~~~l~~~~~~y~~~r~~~~~-~~~~~~K~v   76 (130)
T d1t3ya1           3 KIDKEACRAAYNLVRDDGSAVIWVTFKYDGS--TIVPGEQG---AEYQHFIQQCTDDVRLFAFVRFTTGD-AMSKRSKFA   76 (130)
T ss_dssp             EECHHHHHHHHHHHHCTTSSCCEEEEEEETT--EEEEEEEE---SSHHHHHHHCCTTCEEEEEEEEEECS-GGGCEEEEE
T ss_pred             ccCHHHHHHHHHHHHcCCCCcEEEEEEeCCC--EEEEcCCC---CCHHHHHHhCCCCceEEEEEEEEecC-CCCccccEE
Confidence            46555 778999999865 799999999864  56665544   47999999999999999999999854 468899999


Q ss_pred             EEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333           91 FIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK  143 (143)
Q Consensus        91 fI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~  143 (143)
                      ||+|||++||++.||+||+++.++++.|+|++.+|++++++||+++.|.+||+
T Consensus        77 fI~w~p~~~~~~~Km~~ss~~~~ik~~l~~~~~~i~a~~~~el~~~~i~~kl~  129 (130)
T d1t3ya1          77 LITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIKSELK  129 (130)
T ss_dssp             EEEEECTTSCHHHHHHHHHHHHHHTTTSCCCSEEEEECSGGGGSHHHHHHHHH
T ss_pred             EEEeCCCcCCHhHeeehHHhHHHHHHhcCCceEEEEECChHHCCHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999974

>d1hqz1_ d.109.1.2 (1:) Cofilin-like domain of actin-binding protein abp1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin-like domain of actin-binding protein abp1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.8e-34  Score=200.20  Aligned_cols=123  Identities=14%  Similarity=0.337  Sum_probs=109.9

Q ss_pred             eCHHHHHHHHHhhccC--ceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeeeEEE
Q 032333           14 VADECKNSFMEMKWKK--VHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFF   91 (143)
Q Consensus        14 is~e~~~a~~~lk~~~--~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~vf   91 (143)
                      .++|++++|++++.++  +++|++|.++++ ++|++..+|.   +++||.+.|++++|||++||+.+   ++++++|+||
T Consensus         9 ~s~ei~~ay~~v~~~~~~~~~wvi~~~~~~-~~i~v~~~g~---~~~e~~~~l~~~~~~Y~~~r~~~---~~s~~~K~vf   81 (139)
T d1hqz1_           9 HSREIDAEYLKIVRGSDPDTTWLIISPNAK-KEYEPESTGS---SFHDFLQLFDETKVQYGLARVSP---PGSDVEKIII   81 (139)
T ss_dssp             THHHHHHHHHHHHHTCCTTCCEEEEEECTT-SCEEEEEEES---CHHHHHTCCCTTSCEEEEEEECC---TTCSCCEEEE
T ss_pred             CCHHHHHHHHHHHhCCCCCccEEEEEECCC-cEEEEecCCC---CHHHHHHhcCCCceEEEEEEEec---CCCCcccEEE
Confidence            5899999999986643  599999999985 5788888773   79999999999999999999974   3567899999


Q ss_pred             EEEcCCCCCcchhhhhhhhHHHHHHh-cCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333           92 IAWAPTASRIRAKMLYATSKDGLRRV-LDGIHYEVQATDPTEMGFDVIMDRAK  143 (143)
Q Consensus        92 I~w~P~~a~vk~KMlyassk~~l~~~-l~gi~~~i~~~d~~dl~~~~i~~k~~  143 (143)
                      |+|||++||++.||+||+++.++++. +.+++.+||+++.+||+++.|.+||+
T Consensus        82 I~W~pd~a~~~~Km~yas~~~~v~k~~l~~~~~~i~a~~~~dl~~e~i~~kl~  134 (139)
T d1hqz1_          82 IGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKIS  134 (139)
T ss_dssp             EEECCTTSCHHHHHHHHHHHHHHHHHTSCSCSEEEEESSGGGGCHHHHHHHHH
T ss_pred             EEEcCCCCCHhHhhheeccHHHHHHHhcCCceEEEEeCChHHCCHHHHHHHHH
Confidence            99999999999999999999999655 67899999999999999999999873

>d3cipg1 d.109.1.1 (G:2-125) Gelsolin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Gelsolin-like
domain: Gelsolin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.02  E-value=4.2  Score=25.45  Aligned_cols=79  Identities=14%  Similarity=0.117  Sum_probs=48.9

Q ss_pred             cCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeeeEEEEEEcCCCCCcchhhhh
Q 032333           28 KKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLY  107 (143)
Q Consensus        28 ~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~vfI~w~P~~a~vk~KMly  107 (143)
                      +++.=.-|.+|++. +.+.|.+..     +-    .|-. .-||++.. .+...  +.+...++-+|+...|+..++..-
T Consensus        11 g~~~Gl~VWrIe~~-~~~~vp~~~-----~G----~Fy~-gd~YIil~-ty~~~--~g~~~~~iy~W~G~~ss~~e~~~a   76 (124)
T d3cipg1          11 GKEPGLQIWRVEKF-DLVPVPTNL-----YG----DFFT-GDAYVILK-TVQLR--NGNLQYDLHYWLGNECSQDESGAA   76 (124)
T ss_dssp             TSSSEEEEEEEETT-EEEECCGGG-----TT----EEET-TCEEEEEE-EEECT--TSCEEEEEEEEECTTCCHHHHHHH
T ss_pred             CCCCceEEEEEeCC-EEEECCHHH-----cc----EEeC-CCEEEEEE-EEEcC--CCCEeEEEEEEECCCCChhHHHHH
Confidence            33333558888864 344343221     11    1222 35677643 23222  335678899999999999999887


Q ss_pred             hhhHHHHHHhcCC
Q 032333          108 ATSKDGLRRVLDG  120 (143)
Q Consensus       108 assk~~l~~~l~g  120 (143)
                      |.--..|-+.|+|
T Consensus        77 a~~aveLd~~l~g   89 (124)
T d3cipg1          77 AIFTVQLDDYLNG   89 (124)
T ss_dssp             HHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHcCC
Confidence            7777788888876