Citrus Sinensis ID: 032367

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140--
Protein Sequence
MKPCICSFSSRLLPLSHTSQHHLIHQTRLVAKKMQESPSPLMEKVNHTHSKDNKEEQMDQIRERCGKEACELTSSKRISDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLMCAHGVKQIKSAFYAISKVGQEASQEPRNS
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEcccccccccccccccHHHHHHHHHHHHHccccccHHEcccccccccHHHcccHHHHHccHHHHccccccHHHHHHHHHHHHHHcccccHcccEEEccccccccHHHHHccHHHHHHHHHHcHHHccccccccccc
Coil and Loop (DISEMBL)
mkpcicsfssrllplshtsqhhLIHQTRLVAKKmqespsplmekvnhthskdnkeEQMDQIRERCGKEAceltsskrisddimPHILNLygscatshdfeiyaphasfedplmcahgVKQIKSAFYAISKVgqeasqeprns
Flexible Loop (DISEMBL)
MKPCICSFSSRLLPLSHTSQHHLIHQTRLVAKKMQESPSPLMekvnhthskdnkeeqMDQIRERCGKEACELTsskrisddimPHILNLYGSCATSHDFEIYAPHASFEDPLMCAHGVKQIKSAFYAISKVgqeasqeprns
Low Complexity Region (SEG)
MKPCICSFSSRLLPLSHTSQHHLIHQTRLVAKKMQESPSPLMEKVNHTHSKDNKEEQMDQIRERCGKEACELTSSKRISDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLMCAHGVKQIKSAFYAISKVGQEASQEPRNS
Disordered region (IsUnstruct)
****ICSFSSRLLPL******HLIH****************************************************ISDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLMCAHGVKQIKSAFYAISK************
Disordered Region (DISOPRED)
***C*CSFSSRLLPLSHTSQHHLIHQTRLV***************************************************IMPHILNLYGSCATSHDFEIYAPHASFEDPLMCAHGVKQIKSAFYAISKVGQE********
Disordered Region (DISEMBL)
MKPCICSFSSRLLPLSHTSQHHLIHQTRLVAKKMQESPSPLMEKVNHTHSKDNKEEQMDQIRERCGKEACELTSSKRISDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLMCAHGVKQIKSAFYAISKV***********
Disordered Region (DISPRO)
*KPCICSFSSRLLPLSHTSQHHLIHQTRLVAKKMQESPSPLMEK***************QIR**CGKEAC*LTSSKRISDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLMCAHGVKQIKSAFYAISKVGQ*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKPCICSFSSRLLPLSHTSQHHLIHQTRLVAKKMQESPSPLMExxxxxxxxxxxxxxxxxxxxxCGKEACELTSSKRISDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLMCAHGVKQIKSAFYAISKVGQEASQEPRNS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	142
296084460	206	unnamed protein product [Vitis vinifera]	0.626	0.432	0.651	1e-28
359487029	187	PREDICTED: uncharacterized protein LOC10	0.598	0.454	0.689	2e-28
147845895	177	hypothetical protein VITISV_019410 [Viti	0.549	0.440	0.730	6e-28
255551167	212	conserved hypothetical protein [Ricinus	0.626	0.419	0.651	4e-26
224110130	187	predicted protein [Populus trichocarpa]	0.570	0.433	0.679	7e-26
118489664	187	unknown [Populus trichocarpa x Populus d	0.570	0.433	0.679	7e-26
449434514	232	PREDICTED: uncharacterized protein LOC10	0.542	0.331	0.688	2e-23
297810573	178	hypothetical protein ARALYDRAFT_487267 [	0.549	0.438	0.653	6e-22
18414706	178	Nuclear transport factor 2 (NTF2) family	0.549	0.438	0.653	2e-21
357442823	177	hypothetical protein MTR_1g090630 [Medic	0.549	0.440	0.641	7e-21

>gi|296084460|emb|CBI25019.3| unnamed protein product [Vitis vinifera]

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 58/89 (65%), Positives = 71/89 (79%)

Query: 47  HTHSKDNKEEQMDQIRERCGKEACELTSSKRISDDIMPHILNLYGSCATSHDFEIYAPHA 106
           H       +++MDQ RE+ GKEA E+ + KR+SDDI+PHILNLYG+CA   DFEIYAP A
Sbjct: 19  HMEKNSQDKQEMDQQREQLGKEASEVNALKRVSDDIIPHILNLYGACAAPRDFEIYAPDA 78

Query: 107 SFEDPLMCAHGVKQIKSAFYAISKVGQEA 135
           +FEDPLMCAHGVKQIKSAFY++SKV  E+
Sbjct: 79  TFEDPLMCAHGVKQIKSAFYSLSKVFNES 107

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359487029|ref|XP_002268344.2| PREDICTED: uncharacterized protein LOC100248122 [Vitis vinifera]

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 60/87 (68%), Positives = 73/87 (83%), Gaps = 2/87 (2%)

Query: 49  HSKDNKEEQMDQIRERCGKEACELTSSKRISDDIMPHILNLYGSCATSHDFEIYAPHASF 108
           +S+D +E  MDQ RE+ GKEA E+ + KR+SDDI+PHILNLYG+CA   DFEIYAP A+F
Sbjct: 4   NSQDKQE--MDQQREQLGKEASEVNALKRVSDDIIPHILNLYGACAAPRDFEIYAPDATF 61

Query: 109 EDPLMCAHGVKQIKSAFYAISKVGQEA 135
           EDPLMCAHGVKQIKSAFY++SKV  E+
Sbjct: 62  EDPLMCAHGVKQIKSAFYSLSKVFNES 88

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147845895|emb|CAN82169.1| hypothetical protein VITISV_019410 [Vitis vinifera]

 Score =  129 bits (323), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 57/78 (73%), Positives = 67/78 (85%)

Query: 58  MDQIRERCGKEACELTSSKRISDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLMCAHG 117
           MDQ RE+ GKEA E+ + KR+SDDI+PHILNLYG+CA   DFEIYAP A+FEDPLMCAHG
Sbjct: 1   MDQQREQLGKEASEVNALKRVSDDIIPHILNLYGACAAPRDFEIYAPDATFEDPLMCAHG 60

Query: 118 VKQIKSAFYAISKVGQEA 135
           VKQIKSAFY++SKV  E+
Sbjct: 61  VKQIKSAFYSLSKVFNES 78

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255551167|ref|XP_002516631.1| conserved hypothetical protein [Ricinus communis] gi|223544233|gb|EEF45755.1| conserved hypothetical protein [Ricinus communis]

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 58/89 (65%), Positives = 71/89 (79%)

Query: 50  SKDNKEEQMDQIRERCGKEACELTSSKRISDDIMPHILNLYGSCATSHDFEIYAPHASFE 109
           S+ +K+++ DQ+RE   KEAC+  S K +SDDI+PHILNLY S ATS DFEIYA  ASFE
Sbjct: 6   SQQDKQDKGDQMRESYSKEACDFGSEKGVSDDIIPHILNLYASRATSRDFEIYATDASFE 65

Query: 110 DPLMCAHGVKQIKSAFYAISKVGQEASQE 138
           DPLMCAHGVKQIKS+FY++SKV  E+  E
Sbjct: 66  DPLMCAHGVKQIKSSFYSLSKVFSESRIE 94

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224110130|ref|XP_002315423.1| predicted protein [Populus trichocarpa] gi|222864463|gb|EEF01594.1| predicted protein [Populus trichocarpa]

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 55/81 (67%), Positives = 67/81 (82%)

Query: 55  EEQMDQIRERCGKEACELTSSKRISDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLMC 114
           +++ D+ RE C KE+CE    K +SDDI+PHILNLYGSCAT  DFEIYA +ASFEDPLMC
Sbjct: 8   KDKEDETRECCSKESCEYKPGKPVSDDIIPHILNLYGSCATPRDFEIYASNASFEDPLMC 67

Query: 115 AHGVKQIKSAFYAISKVGQEA 135
           AHGVKQIKSAFY++SK+  E+
Sbjct: 68  AHGVKQIKSAFYSLSKIFSES 88

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489664|gb|ABK96633.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 55/81 (67%), Positives = 67/81 (82%)

Query: 55  EEQMDQIRERCGKEACELTSSKRISDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLMC 114
           +++ D+ RE C KE+CE    K +SDDI+PHILNLYGSCAT  DFEIYA +ASFEDPLMC
Sbjct: 8   KDKEDETRECCSKESCEYKPGKPVSDDIIPHILNLYGSCATPRDFEIYASNASFEDPLMC 67

Query: 115 AHGVKQIKSAFYAISKVGQEA 135
           AHGVKQIKSAFY++SK+  E+
Sbjct: 68  AHGVKQIKSAFYSLSKIFSES 88

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434514|ref|XP_004135041.1| PREDICTED: uncharacterized protein LOC101206496 [Cucumis sativus]

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/77 (68%), Positives = 62/77 (80%)

Query: 59  DQIRERCGKEACELTSSKRISDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLMCAHGV 118
           D   E C KEAC+  ++KR++DDIMPHILNLYGS AT  DFEIYAP ASFEDPL  AHGV
Sbjct: 60  DPTIEACTKEACDSKTTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHGV 119

Query: 119 KQIKSAFYAISKVGQEA 135
           K+IKSAFY++SKV  E+
Sbjct: 120 KEIKSAFYSLSKVFSES 136

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297810573|ref|XP_002873170.1| hypothetical protein ARALYDRAFT_487267 [Arabidopsis lyrata subsp. lyrata] gi|297319007|gb|EFH49429.1| hypothetical protein ARALYDRAFT_487267 [Arabidopsis lyrata subsp. lyrata]

 Score =  108 bits (271), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 51/78 (65%), Positives = 63/78 (80%)

Query: 58  MDQIRERCGKEACELTSSKRISDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLMCAHG 117
           MD  RE  GK ACEL S++R +D IMPH+LNLYGSCA + DF++YAP+ASFEDPL  A G
Sbjct: 1   MDPSRECEGKGACELKSNQRFADKIMPHLLNLYGSCAKASDFDMYAPNASFEDPLTHAQG 60

Query: 118 VKQIKSAFYAISKVGQEA 135
           VKQIKSAFY+++KV  E+
Sbjct: 61  VKQIKSAFYSLAKVFSES 78

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18414706|ref|NP_568142.1| Nuclear transport factor 2 (NTF2) family protein [Arabidopsis thaliana] gi|30680652|ref|NP_850766.1| Nuclear transport factor 2 (NTF2) family protein [Arabidopsis thaliana] gi|13507539|gb|AAK28632.1|AF360335_1 unknown protein [Arabidopsis thaliana] gi|9758458|dbj|BAB08987.1| unnamed protein product [Arabidopsis thaliana] gi|15293273|gb|AAK93747.1| unknown protein [Arabidopsis thaliana] gi|332003408|gb|AED90791.1| Nuclear transport factor 2 (NTF2) family protein [Arabidopsis thaliana] gi|332003409|gb|AED90792.1| Nuclear transport factor 2 (NTF2) family protein [Arabidopsis thaliana]

 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 51/78 (65%), Positives = 62/78 (79%)

Query: 58  MDQIRERCGKEACELTSSKRISDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLMCAHG 117
           MD  RE  GK ACEL S+KR +D IMPH+LNLYGS A ++DF++YAP+ASFEDPL  A G
Sbjct: 1   MDPARECEGKGACELKSNKRFADKIMPHLLNLYGSSAKANDFDMYAPNASFEDPLTHAQG 60

Query: 118 VKQIKSAFYAISKVGQEA 135
           VKQIKSAFY++ KV  E+
Sbjct: 61  VKQIKSAFYSLPKVFGES 78

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357442823|ref|XP_003591689.1| hypothetical protein MTR_1g090630 [Medicago truncatula] gi|355480737|gb|AES61940.1| hypothetical protein MTR_1g090630 [Medicago truncatula]

 Score =  105 bits (261), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 50/78 (64%), Positives = 61/78 (78%)

Query: 58  MDQIRERCGKEACELTSSKRISDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLMCAHG 117
           MD  +E   KEA + T+ K I+D I+PHIL+LYGSCAT+ DFEIYAP ASFEDPLM A G
Sbjct: 1   MDAGKETSYKEAFDSTAKKSIADGIIPHILHLYGSCATARDFEIYAPDASFEDPLMRAQG 60

Query: 118 VKQIKSAFYAISKVGQEA 135
           VKQIKSAFY++ K+  E+
Sbjct: 61  VKQIKSAFYSLPKLFSES 78

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	142
TAIR|locus:2175463	178	AT5G04830 "AT5G04830" [Arabido	0.549	0.438	0.653	5.5e-22

TAIR|locus:2175463 AT5G04830 "AT5G04830" [Arabidopsis thaliana (taxid:3702)]

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 51/78 (65%), Positives = 62/78 (79%)

Query:    58 MDQIRERCGKEACELTSSKRISDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLMCAHG 117
             MD  RE  GK ACEL S+KR +D IMPH+LNLYGS A ++DF++YAP+ASFEDPL  A G
Sbjct:     1 MDPARECEGKGACELKSNKRFADKIMPHLLNLYGSSAKANDFDMYAPNASFEDPLTHAQG 60

Query:   118 VKQIKSAFYAISKVGQEA 135
             VKQIKSAFY++ KV  E+
Sbjct:    61 VKQIKSAFYSLPKVFGES 78


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.128   0.380    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      142       142   0.00091  102 3  11 22  0.44    31
                                                     30  0.47    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  565 (60 KB)
  Total size of DFA:  140 KB (2087 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.91u 0.14s 18.05t   Elapsed:  00:00:00
  Total cpu time:  17.91u 0.14s 18.05t   Elapsed:  00:00:00
  Start:  Sat May 11 02:46:11 2013   End:  Sat May 11 02:46:11 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00013811001 SubName- Full=Chromosome undetermined scaffold_100, whole genome shotgun sequence; (177 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	142
PF10184	113	DUF2358: Uncharacterized conserved protein (DUF235	97.26
cd00781	122	ketosteroid_isomerase ketosteroid isomerase: Many	95.53
PF12680	102	SnoaL_2: SnoaL-like domain; PDB: 3F40_A 3RGA_A 3G8	95.31
TIGR02096	129	conserved hypothetical protein, steroid delta-isom	93.41
TIGR02246	128	conserved hypothetical protein. This family consis	89.05
PF07366	126	SnoaL: SnoaL-like polyketide cyclase; InterPro: IP	87.92
TIGR02960	324	SigX5 RNA polymerase sigma-70 factor, TIGR02960 fa	85.23

>PF10184 DUF2358: Uncharacterized conserved protein (DUF2358); InterPro: IPR018790 This entry represents a family of conserved proteins

Probab=97.26  E-value=0.00029  Score=50.72  Aligned_cols=55  Identities=16%  Similarity=0.349  Sum_probs=42.1

Q ss_pred             hhchHHHHHHHhCCCCCccccccccCCCcccCcccccccHHHHHHH---HHhhhh-hccccc
Q 032367           79 SDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLMCAHGVKQIKSA---FYAISK-VGQEAS  136 (142)
Q Consensus        79 ~~~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~~A~Gv~qIksQ---FYgLPK-vFseSe  136 (142)
                      .+.+-.++-.+|.+.   -+++||++|..|.||+..-+|+..++..   .-.|-. .|++++
T Consensus         4 ~~~Lr~D~~~~f~~~---~~~~iY~~dv~F~Dp~~~f~g~~~Y~~~~~~l~~l~~~~~~~~~   62 (113)
T PF10184_consen    4 IRTLREDLPRFFTGD---LDYSIYDEDVVFIDPIVSFKGLDRYKRNLWALRFLGRLFFSDPS   62 (113)
T ss_pred             HHHHHHHHHHHhcCC---CChhhcCCCeEEECCCCceecHHHHHHHHHHHHHHHhhccCCcE
Confidence            345677888899444   5688999999999999999999999999   444444 344443

The function is unknown.

>cd00781 ketosteroid_isomerase ketosteroid isomerase: Many biological reactions proceed by enzymatic cleavage of a C-H bond adjacent to carbonyl or a carboxyl group, leading to an enol or a enolate intermediate that is subsequently re-protonated at the same or an adjacent carbon

Probab=95.53  E-value=0.014  Score=39.68  Aligned_cols=54  Identities=13%  Similarity=0.161  Sum_probs=42.5

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCcccc--cccHHHHHHHHHhhhhhccc
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPLMC--AHGVKQIKSAFYAISKVGQE  134 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~~--A~Gv~qIksQFYgLPKvFse  134 (142)
                      .++....+.++..-...-.++|++|++|+||.+.  ..|+..|+.-|-.+...+..
T Consensus         7 ~~v~~~~~a~~~~D~~~~~~l~aed~~~~~p~~~~~~~G~~~i~~~~~~~~~~~~~   62 (122)
T cd00781           7 AAVQRYVEAVNAGDPEGIVALFADDATVEDPVGSPPRSGRAAIAAFYAQSLGGAKR   62 (122)
T ss_pred             HHHHHHHHHHHCCCHHHHHHHcCCCeEEeCCCCCCCccCHHHHHHHHHHHhccCce
Confidence            4666677777666666667789999999999765  89999999999988775543

Ketosteroid isomerases are important members of this class of enzymes which are the most proficient of all enzymes known and have served as a paradigm for enzymatic enolizations since its discovery in 1954. This CD includes members of this class that calalyze the isomerization of various beta,gamma-unsaturated isomers at nearly a diffusion-controlled rate. These enzymes are widely distributed in bacteria.

>PF12680 SnoaL_2: SnoaL-like domain; PDB: 3F40_A 3RGA_A 3G8Z_A 3DMC_A 3FH1_A 1TUH_A 3F14_A 3ER7_A 1Z1S_A 3F7X_A

Probab=95.31  E-value=0.0046  Score=38.87  Aligned_cols=50  Identities=18%  Similarity=0.217  Sum_probs=37.9

Q ss_pred             HHhCCCCCccccccccCCCcccCcccccccHHHHHHHHHhhhhhcccccc
Q 032367           88 NLYGSCATSHDFEIYAPHASFEDPLMCAHGVKQIKSAFYAISKVGQEASQ  137 (142)
Q Consensus        88 eLYsc~PT~edFeiYApdAtFEDPl~~A~Gv~qIksQFYgLPKvFseSei  137 (142)
                      +.++..--..-.+.|+||++|+||.....|+.+|++.|-.+-+.|++.+.
T Consensus         6 ~a~~~~d~~~i~~~~~~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~   55 (102)
T PF12680_consen    6 EAWNAGDLDAIAALFAPDAVFHDPGGTLRGREAIREFFEEFFESFPDIRF   55 (102)
T ss_dssp             HHHHTTHHHHHHHTEEEEEEEEETTSEEESHHHHHHHHHHHHHHEEEEEE
T ss_pred             HHHHcCCHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHhcCCceEE
Confidence            33333333445678999999999977889999999999988887765543

...

>TIGR02096 conserved hypothetical protein, steroid delta-isomerase-related

Probab=93.41  E-value=0.086  Score=35.90  Aligned_cols=55  Identities=9%  Similarity=0.136  Sum_probs=39.6

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCccc--ccccHHHHHHHHHhhhhhcccc
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPLM--CAHGVKQIKSAFYAISKVGQEA  135 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~--~A~Gv~qIksQFYgLPKvFseS  135 (142)
                      .|+....+.++.+--..-.++|+||++|+||..  .-.|+..|+.-|-.+-+.++.-
T Consensus         2 ~iv~~~~~a~~~~d~~~~~~~~~~d~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~   58 (129)
T TIGR02096         2 ELAQHWIEAFNRGDMDAVLALLAEDVLYDDNQGGRVLGGKAQLARFLAPYRTAFPDL   58 (129)
T ss_pred             HHHHHHHHHHHCCCHHHHHHhcCCCeEEEcCCCCcEeccHHHHHHHHHHHHHhCchh
Confidence            356666666666666677788999999999975  3466999986665666666544

This family of proteins about 135 amino acids in length largely restricted to the Proteobacteria. This family and a delta5-3-ketosteroid isomerase from Pseudomonas testosteroni appear homologous, especially toward their respective N-termini. Members, therefore, probably are enzymes.

>TIGR02246 conserved hypothetical protein

Probab=89.05  E-value=0.54  Score=31.56  Aligned_cols=52  Identities=12%  Similarity=0.077  Sum_probs=36.4

Q ss_pred             hHHHHHHHhCCCCCccccccccCCCcccCccc-ccccHHHHHHHHHhhhhhcc
Q 032367           82 IMPHILNLYGSCATSHDFEIYAPHASFEDPLM-CAHGVKQIKSAFYAISKVGQ  133 (142)
Q Consensus        82 Il~~IleLYsc~PT~edFeiYApdAtFEDPl~-~A~Gv~qIksQFYgLPKvFs  133 (142)
                      ++....+.+..+--.+-.++|++||+|.++.+ ..+|+.+|++.|-.+-..++
T Consensus         9 l~~~~~~a~~~~D~~~~~~~~~~Da~~~~~~g~~~~G~~~i~~~~~~~~~~~~   61 (128)
T TIGR02246         9 LVATWEAAWAAGDAEGFADLFTPDGVFVTVPGQVWKGREAIAAAHEAFLAGPY   61 (128)
T ss_pred             HHHHHHHHHHcCCHHHHHHhhCCCceEECCCCCeecCHHHHHHHHHHHhcccC
Confidence            44455555555555567778999999985544 67999999998876554443

This family consists of uncharacterized proteins found in a number of genera and species, including Streptomyces, Xanthomonas, Oceanobacillus iheyensis, Caulobacter crescentus CB15, and Xylella fastidiosa. The function is unknown.

>PF07366 SnoaL: SnoaL-like polyketide cyclase; InterPro: IPR009959 This domain is found in SnoaL [] a polyketide cyclase involved in nogalamycin biosynthesis

Probab=87.92  E-value=0.39  Score=33.09  Aligned_cols=56  Identities=14%  Similarity=0.096  Sum_probs=46.6

Q ss_pred             hHHHHHHHhCCCCCccccccccCCCcccCcc-cccccHHHHHHHHHhhhhhcccccc
Q 032367           82 IMPHILNLYGSCATSHDFEIYAPHASFEDPL-MCAHGVKQIKSAFYAISKVGQEASQ  137 (142)
Q Consensus        82 Il~~IleLYsc~PT~edFeiYApdAtFEDPl-~~A~Gv~qIksQFYgLPKvFseSei  137 (142)
                      +++...++++.+--..--++|+||.++++|. ....|+..+++.+-.+-..|++.+.
T Consensus         3 v~~~~~~~~n~~d~~~~~~~~~~d~~~~~~~~~~~~G~~~~~~~~~~~~~afPD~~~   59 (126)
T PF07366_consen    3 VRRFYEEVWNRGDLDALDELVAPDVVFHDPGPGPPVGREGFKEFLKELRAAFPDLRF   59 (126)
T ss_dssp             HHHHHHHHHHTT-GCHHHGTEEEEEEEEGCTTTEEEHHHHHHHHHHHHHHHSTTTEE
T ss_pred             HHHHHHHHHhCCCHHHHHHhcCCCEEEEecCCCCCCCHHHHHHHHHHHHHHCCCCEE
Confidence            5666777887776667777899999999997 7999999999999999999987654

This domain was formerly known as DUF1486. It adopts a distorted alpha-beta barrel fold []. Structural data together with site-directed mutagenesis experiments have shown that SnoaL has a different mechanism to that of the classical aldolase for catalysing intramolecular aldol condensation [].; PDB: 2GEY_C 3F9S_A 2GEX_A 3EHC_B 2F99_D 2F98_D 1SJW_A 3K0Z_B.

>TIGR02960 SigX5 RNA polymerase sigma-70 factor, TIGR02960 family

Probab=85.23  E-value=1.1  Score=35.94  Aligned_cols=57  Identities=12%  Similarity=0.131  Sum_probs=46.0

Q ss_pred             cchhchHHHHHHHhCCCCCccccccccCCCcccCcccc--cccHHHHHHHHHhh--hhhcc
Q 032367           77 RISDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLMC--AHGVKQIKSAFYAI--SKVGQ  133 (142)
Q Consensus        77 ~~~~~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~~--A~Gv~qIksQFYgL--PKvFs  133 (142)
                      .....+++...+-++..-...-.++++||++|++|.+.  -.|...|+.-|-++  ...|.
T Consensus       204 ~~~~~~v~~~~~a~~~gD~~~l~~Lla~Dv~~~~p~~~~~~~G~~~v~~~~~~~~~~~~~~  264 (324)
T TIGR02960       204 PEEQDLLERYIAAFESYDLDALTALLHEDAIWEMPPYTLWYQGRPAIVGFIHTVCPGEGAA  264 (324)
T ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHhcCCeEEEcCCCCcceeCHHHHHHHHHHhcccccCC
Confidence            34566788888888888888888999999999999854  88999999877777  44443

This group of sigma factors are members of the sigma-70 family (TIGR02937). They and appear by homology, tree building, bidirectional best hits and one-to-a-genome distribution, to represent a conserved family.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	142
3dxo_A	121	Uncharacterized snoal-like protein; putative isome	96.4
3h3h_A	122	Uncharacterized snoal-like protein; structural gen	96.15
4h3u_A	158	Hypothetical protein; structural genomics, PSI-bio	95.93
3mso_A	143	Steroid delta-isomerase; structural genomics, join	95.88
1oh0_A	131	Steroid delta-isomerase; ketosteroid isomerase, KS	95.87
3jum_A	185	Phenazine biosynthesis protein A/B; chirality, dru	95.81
2a15_A	139	Hypothetical protein RV0760C; beta-alpha-barrel, s	95.76
3f8x_A	148	Putative delta-5-3-ketosteroid isomerase; structur	95.38
3hk4_A	136	MLR7391 protein; NTF2-like protein, structural gen	94.94
1ohp_A	125	Steroid delta-isomerase; inhibitor; HET: ESR; 1.53	94.79
1s5a_A	150	Hypothetical protein YESE; structural genomics, PS	94.63
3k0z_A	159	Putative polyketide cyclase; structural genomics,	94.39
3ff2_A	117	Uncharacterized cystatin fold protein (YP_497570.	94.3
3ebt_A	132	Uncharacterized NTF2-like protein; structural geno	94.01
1nww_A	149	Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {R	93.95
1z1s_A	163	Hypothetical protein PA3332; beta barrel, conserve	93.93
3fgy_A	135	Uncharacterized NTF2-like protein; structural geno	93.88
2gey_A	158	ACLR protein; alpha+beta barrel, oxidoreductase; H	93.57
1sjw_A	144	Nogalonic acid methyl ester cyclase; anthracycline	93.49
3f9s_A	146	Putative polyketide cyclase; structural genomics,	93.45
2gex_A	152	SNOL; alpha+beta barrel, oxidoreductase; 2.50A {St	93.35
2f99_A	153	Aklanonic acid methyl ester cyclase, AKNH; anthrac	93.2
3fh1_A	129	Uncharacterized NTF2-like protein; structural geno	92.86
3g0k_A	148	Putative membrane protein; snoal-like polyketide c	92.21
3rga_A	283	Epoxide hydrolase; NTF2-like, epoxide-opening cycl	92.16
3rga_A	283	Epoxide hydrolase; NTF2-like, epoxide-opening cycl	92.08
2gxf_A	142	Hypothetical protein YYBH; alpha-beta protein., st	91.96
3hx8_A	129	MLR2180 protein, putative ketosteroid isomerase; s	91.78
3kkg_A	146	Putative snoal-like polyketide cyclase; structural	91.37
3i0y_A	140	Putative polyketide cyclase; cystatin-like fold, s	91.19
3ec9_A	140	Uncharacterized NTF2-like protein; structural geno	90.48
3dm8_A	143	Uncharacterized protein RPA4348; siras, putative i	89.79
3ke7_A	134	Putative ketosteroid isomerase; structural genomic	89.78
3f7x_A	151	Putative polyketide cyclase; structural genomics,	89.66
2k54_A	123	Protein ATU0742; protein of unknown function, stru	89.42
3ehc_A	128	Snoal-like polyketide cyclase; structural genomics	89.19
3dmc_A	134	NTF2-like protein; structural genomics, joint cent	88.28
3d9r_A	135	Ketosteroid isomerase-like protein; YP_049581.1, s	88.07
3flj_A	155	Uncharacterized protein conserved in bacteria WIT	87.73
3h51_A	156	Putative calcium/calmodulin dependent protein KIN	87.33
1tuh_A	156	BAL32A, hypothetical protein EGC068; unknown funct	86.73
3g8z_A	148	Protein of unknown function with cystatin-like FO;	86.61
2bng_A	149	MB2760; epoxide hydrolase, limonene, hydrolase, st	83.41
2rfr_A	155	Uncharacterized protein; structural genomics, join	82.68
3g16_A	156	Uncharacterized protein with cystatin-like fold; Y	81.8

>3dxo_A Uncharacterized snoal-like protein; putative isomerase of the snoal-like family; HET: MSE PGE; 2.70A {Agrobacterium tumefaciens str} SCOP: d.17.4.19

Probab=96.40  E-value=0.00079  Score=46.00  Aligned_cols=58  Identities=17%  Similarity=0.125  Sum_probs=45.7

Q ss_pred             hchHHHHHHHhCCCCCc----cccccccCCCcccCcccccccHHHHHHHHHhhhhhcccccc
Q 032367           80 DDIMPHILNLYGSCATS----HDFEIYAPHASFEDPLMCAHGVKQIKSAFYAISKVGQEASQ  137 (142)
Q Consensus        80 ~~Il~~IleLYsc~PT~----edFeiYApdAtFEDPl~~A~Gv~qIksQFYgLPKvFseSei  137 (142)
                      +.+++...+.|+..-..    .--++|++|++|+||.+...|+..|++-|-++-..|+.-+.
T Consensus         6 ~~~v~ry~~aw~~~d~~~~~~~l~~l~a~D~~~~dP~~~~~G~~ai~~~~~~~~~~~~~~~f   67 (121)
T 3dxo_A            6 LTIAQTYLAAWNEEDNERRRHLVGQAWAENTRYVDPLMQGEGQQGIAAMIEAARQKFPGYRF   67 (121)
T ss_dssp             HHHHHHHHHHHHCSCHHHHHHHHHHHEEEEEEEECSSCEEEHHHHHHHHHHHHHHHSTTCEE
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHhcCCCeEEECCCCCcCCHHHHHHHHHHHHHHCCCcEE
Confidence            34677788888765543    34577999999999999999999999988888777765443

>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}

Probab=96.15  E-value=0.0013  Score=43.92  Aligned_cols=57  Identities=9%  Similarity=0.139  Sum_probs=46.6

Q ss_pred             hchHHHHHHHhCCCCCccccccccCCCcccCcc---------cccccHHHHHHHHHhhhhhccccc
Q 032367           80 DDIMPHILNLYGSCATSHDFEIYAPHASFEDPL---------MCAHGVKQIKSAFYAISKVGQEAS  136 (142)
Q Consensus        80 ~~Il~~IleLYsc~PT~edFeiYApdAtFEDPl---------~~A~Gv~qIksQFYgLPKvFseSe  136 (142)
                      +.+++...+-++..--..-.++|++|++|+||.         ...+|+..|++-|-.+-..|+.-+
T Consensus        11 ~~~~~~~~~a~n~~D~~~l~~l~a~D~v~~~p~~~~~~g~~~~~~~G~~ai~~~~~~~~~~~~~~~   76 (122)
T 3h3h_A           11 QQFSREWIDAWNAHDLDAILSHYADGFEMSSPMIVQIAGEPSGRLRGKEQVGAYWREALRMIPDLH   76 (122)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHTTEEEEEEEECHHHHHHHC-CCCEEEHHHHHHHHHHHHHHHCTTCC
T ss_pred             HHHHHHHHHHHhccCHHHHHHhcCCCEEEECCCcccccCCCCCcEEcHHHHHHHHHHHHHHCCCcE
Confidence            457778888888777777888999999999995         578999999999988777776543

>4h3u_A Hypothetical protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.15A {Catenulispora acidiphila}

Probab=95.93  E-value=0.0019  Score=45.08  Aligned_cols=74  Identities=12%  Similarity=0.082  Sum_probs=49.9

Q ss_pred             HHHHhhcccccccccCCccchhchHHHHHHHhCCCCCccccccccCCCcccCccc--ccccHHHHHHHHHhhhhhccccc
Q 032367           59 DQIRERCGKEACELTSSKRISDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLM--CAHGVKQIKSAFYAISKVGQEAS  136 (142)
Q Consensus        59 d~~~E~~~kEa~~~~~~~~~~~~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~--~A~Gv~qIksQFYgLPKvFseSe  136 (142)
                      |-.+|..+.++..-..     ..||....+.|+..-...-.++|++||+|+||..  ...|+..|++-|-++...|+..+
T Consensus        12 ~~~~e~l~~~~~~mt~-----~eiv~~y~~A~n~~D~d~~~~l~a~D~v~~d~~~g~~~~Greai~~~~~~~~~~~~d~~   86 (158)
T 4h3u_A           12 DLGTENLYFQSNAMTT-----PEIVTAWAAAWTGTNPNALGTLFAADGTYVDHAIGATMTGREQISGWKARTDAMIENVH   86 (158)
T ss_dssp             -------------CCC-----CHHHHHHHHHHHSSCHHHHHTTEEEEEEEEETTTTEEEESHHHHHHHHHHHHHHEEEEE
T ss_pred             ccCCccceeccCCCCH-----HHHHHHHHHHHHcCCHHHHHHHhcccceEeccCCCceEecchhhhhhhhhhhccCCccc
Confidence            4445555554333222     3589999999999888888899999999999864  57899999998888888887654


Q ss_pred             c
Q 032367          137 Q  137 (142)
Q Consensus       137 i  137 (142)
                      .
T Consensus        87 ~   87 (158)
T 4h3u_A           87 V   87 (158)
T ss_dssp             E
T ss_pred             e
Confidence            3

>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}

Probab=95.88  E-value=0.0062  Score=43.26  Aligned_cols=58  Identities=14%  Similarity=0.132  Sum_probs=46.9

Q ss_pred             cchhchHHHHHHHhCCCCCccccccccCCCcccCcc--cccccHHHHHHHHHhhhhhccc
Q 032367           77 RISDDIMPHILNLYGSCATSHDFEIYAPHASFEDPL--MCAHGVKQIKSAFYAISKVGQE  134 (142)
Q Consensus        77 ~~~~~Il~~IleLYsc~PT~edFeiYApdAtFEDPl--~~A~Gv~qIksQFYgLPKvFse  134 (142)
                      +-...++....+-....-...-.++|++|++|+||+  ..-.|+..|+.-|-++-..|..
T Consensus         9 ~~~~~~~~~~~~a~~~~D~~~l~~l~a~D~v~~~P~~~~~~~G~~~v~~~~~~~~~~~~~   68 (143)
T 3mso_A            9 ANAAATLAEWHGLIARRDLSGLPRLLHPDAVFRSPMAHKPYAGAPVVSMILNTVLTVFED   68 (143)
T ss_dssp             HHHHHHHHHHHHHHHTTCCTTGGGGEEEEEEEECSSCSSCEESHHHHHHHHHHHHHHCEE
T ss_pred             HHHHHHHHHHHHHHhcCCHHHHHHhcCCCEEEECCCCCCCccCHHHHHHHHHHHHhhCCc
Confidence            334556677777777777777888999999999999  6679999999999988887763

>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} SCOP: d.17.4.3 PDB: 1e3v_A* 1opy_A 1dmq_A 1dmm_A 1ea2_A 3cpo_A 1e3r_A* 1ogx_A 2inx_A 2pzv_A 1c7h_A 1dmn_A 1k41_A 1oho_A* 3fzw_A* 1cqs_A* 1w00_A 1e97_A 1w6y_A* 3ipt_A* ...

Probab=95.87  E-value=0.002  Score=42.19  Aligned_cols=54  Identities=24%  Similarity=0.308  Sum_probs=42.7

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCccc--ccccHHHHHHHHHhhhhhccc
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPLM--CAHGVKQIKSAFYAISKVGQE  134 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~--~A~Gv~qIksQFYgLPKvFse  134 (142)
                      .++....+.++..-...-.++|+||++|++|.+  ...|+..|++.|-++...|+.
T Consensus        11 ~~v~~~~~a~~~~D~~~l~~l~a~D~~~~~p~~~~~~~G~~~i~~~~~~~~~~~~~   66 (131)
T 1oh0_A           11 GLMARYIELVDVGDIEAIVQMYADDATVEDPFGQPPIHGREQIAAFYRQGLGGGKV   66 (131)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHEEEEEEEESSTTSCCEEHHHHHHHHHHHHHSSSCC
T ss_pred             HHHHHHHHHHhCCCHHHHHHHcCCCEEEEcCCCCCCcccHHHHHHHHHHHhhccce
Confidence            355666666665555566678999999999987  889999999999888877764

>3jum_A Phenazine biosynthesis protein A/B; chirality, drug design, medicinal CH inhibitor, biosynthetic protein; HET: AOD; 1.45A {Burkholderia SP} PDB: 3b4o_A* 3b4p_A* 3dzl_A* 3ex9_A 3cnm_A* 3jun_A* 3juo_A* 3jup_A* 3juq_A*

Probab=95.81  E-value=0.0047  Score=47.94  Aligned_cols=53  Identities=8%  Similarity=-0.030  Sum_probs=42.9

Q ss_pred             hHHHHHHHhCCCCCccccccccCCCcccCccc------ccccHHHHHHHHHhhhhhcccc
Q 032367           82 IMPHILNLYGSCATSHDFEIYAPHASFEDPLM------CAHGVKQIKSAFYAISKVGQEA  135 (142)
Q Consensus        82 Il~~IleLYsc~PT~edFeiYApdAtFEDPl~------~A~Gv~qIksQFYgLPKvFseS  135 (142)
                      +++..++..+. --..-.++||+||+++.|+.      ...|+..|++-|-++++.|..-
T Consensus        46 vV~~yl~~~~~-D~~~~~eLfAeDav~e~P~~~~G~P~r~~GReai~~~~~~~~~~~~d~  104 (185)
T 3jum_A           46 IVEQYMHTRGE-ARLKRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFPDW  104 (185)
T ss_dssp             HHHHHHHCCGG-GGGGGGGGEEEEEEEEESCCTTSSCEEEESHHHHHHHHHHHHHHSTTC
T ss_pred             HHHHHHHHhcc-CHHHHHHhCCCCEEEEecCCCCCCCccccCHHHHHHHHHHHHhhCCCC
Confidence            88888887443 44567889999999999853      3789999999999999988763

>2a15_A Hypothetical protein RV0760C; beta-alpha-barrel, structural genomics, PSI, protein structure initiative; 1.68A {Mycobacterium tuberculosis} SCOP: d.17.4.3 PDB: 2z76_A* 2z77_A* 2z7a_A

Probab=95.76  E-value=0.0035  Score=41.97  Aligned_cols=51  Identities=12%  Similarity=0.075  Sum_probs=39.8

Q ss_pred             hHHHHHHHhCCCCCccccccccCCCcccCcccc---------cccHHHHHHHHHhhhhhc
Q 032367           82 IMPHILNLYGSCATSHDFEIYAPHASFEDPLMC---------AHGVKQIKSAFYAISKVG  132 (142)
Q Consensus        82 Il~~IleLYsc~PT~edFeiYApdAtFEDPl~~---------A~Gv~qIksQFYgLPKvF  132 (142)
                      ++....+.++..--..-.++||+||+|+||++.         .+|+..|++-|-.+...|
T Consensus        12 ~v~~~~~a~~~~D~~~~~~l~a~D~v~~~p~~~~~~~~~g~~~~G~~ai~~~~~~~~~~~   71 (139)
T 2a15_A           12 ASQSSWRCVQAHDREGWLALMADDVVIEDPIGKSVTNPDGSGIKGKEAVGAFFDTHIAAN   71 (139)
T ss_dssp             HHHHHHHHHHTTCHHHHHHTEEEEEEEESSSSSBTTBTTSSCEESHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHHHhCCCHHHHHHhcCCCEEEECCCCCCccCCCCceeecHHHHHHHHHHhcccc
Confidence            555566666665556667789999999999874         589999999998887665

>3f8x_A Putative delta-5-3-ketosteroid isomerase; structural genomics, joint center for structural genomics; HET: MSE; 1.55A {Pectobacterium atrosepticum SCRI1043}

Probab=95.38  E-value=0.0085  Score=43.71  Aligned_cols=61  Identities=11%  Similarity=0.091  Sum_probs=51.7

Q ss_pred             CccchhchHHHHHHHhCCCCCccccccccCCCcccCcccc--cccHHHHHHHHHhhhhhcccc
Q 032367           75 SKRISDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLMC--AHGVKQIKSAFYAISKVGQEA  135 (142)
Q Consensus        75 ~~~~~~~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~~--A~Gv~qIksQFYgLPKvFseS  135 (142)
                      +.+..+.++....+.....-...-.++||+|++|+||...  -.|+..|+.-|-++-..|..-
T Consensus        18 ~~~~~~~~l~~f~~a~~~gD~~aL~~LlA~Dvv~~~P~~~~~~~G~~av~~~~~~~~~~~~~f   80 (148)
T 3f8x_A           18 PNAAVQSGLQEWHRIIAEADWERLPDLLAEDVVFSNPSTFDPYHGKGPLMVILPAVFSVLENF   80 (148)
T ss_dssp             CCHHHHHHHHHHHHHHHHTCGGGSGGGEEEEEEEECSSCSSCEESHHHHHHHHHHHHHHCEEE
T ss_pred             hhHHHHHHHHHHHHHHHcCCHHHHHHHhCCCEEEECCCCCCCcCCHHHHHHHHHHHHhhCCCE
Confidence            4455667888888888888888889999999999999875  689999999999998888543

>3hk4_A MLR7391 protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, lyase; HET: MSE; 1.96A {Mesorhizobium loti}

Probab=94.94  E-value=0.0087  Score=42.75  Aligned_cols=52  Identities=10%  Similarity=0.063  Sum_probs=36.5

Q ss_pred             hHHHHHHHhCCCCCcc-ccccccCCCcccCc----ccccccHHHHHHHHHhhhhhcc
Q 032367           82 IMPHILNLYGSCATSH-DFEIYAPHASFEDP----LMCAHGVKQIKSAFYAISKVGQ  133 (142)
Q Consensus        82 Il~~IleLYsc~PT~e-dFeiYApdAtFEDP----l~~A~Gv~qIksQFYgLPKvFs  133 (142)
                      |+..+.++....-..+ -.++||||++|+||    .+...|+..|++.|-.+...|.
T Consensus        25 vv~r~~e~~~~gd~~~~l~~lya~D~v~~dp~~~~~~~~~G~eai~~~~~~~~~~~~   81 (136)
T 3hk4_A           25 IAKDFTELLKQGDNAGAAEKYNADDIASYEAMEGPMAVSHGKEALRQKSQWWQENHE   81 (136)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHEEEEEEEECSSCSTTSEEESHHHHHHHHHHHHHTEE
T ss_pred             HHHHHHHHHHcCCcHHHHHHHCCCCEEEEcCCCCCccccCCHHHHHHHHHHHHhcCC
Confidence            6666666655444333 37789999999999    4556899999986665555443

>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A* 1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A* 3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A 3ov4_A* 3nm2_A

Probab=94.79  E-value=0.0078  Score=38.09  Aligned_cols=53  Identities=13%  Similarity=0.196  Sum_probs=40.3

Q ss_pred             hHHHHHHHhCCCCCccccccccCCCcccCccc--ccccHHHHHHHHHhhhhhccc
Q 032367           82 IMPHILNLYGSCATSHDFEIYAPHASFEDPLM--CAHGVKQIKSAFYAISKVGQE  134 (142)
Q Consensus        82 Il~~IleLYsc~PT~edFeiYApdAtFEDPl~--~A~Gv~qIksQFYgLPKvFse  134 (142)
                      ++....+.+...-...-.++|+||++|++|.+  ...|+..|++.|-++.+.|+.
T Consensus        10 ~v~~~~~a~~~~D~~~~~~l~a~D~~~~~~~~~~~~~G~~~i~~~~~~~~~~~~~   64 (125)
T 1ohp_A           10 VVQRYVAALNAGDLDGIVALFADDATVENPVGSEPRSGTAAIREFYANSLKLPLA   64 (125)
T ss_dssp             HHHHHHHHHHHTCHHHHHTTEEEEEEEESSTTSCCEESHHHHHHHHHHHTSSCCE
T ss_pred             HHHHHHHHHhCCCHHHHHHHcCCCeEEECCCCCCCccCHHHHHHHHHHhcccCce
Confidence            55555555555555556678999999999975  789999999988888777653

>1s5a_A Hypothetical protein YESE; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Bacillus subtilis} SCOP: d.17.4.10

Probab=94.63  E-value=0.011  Score=39.50  Aligned_cols=56  Identities=16%  Similarity=0.086  Sum_probs=42.7

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCcc---c---ccccHHHHHHHHHhhhhhccccc
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPL---M---CAHGVKQIKSAFYAISKVGQEAS  136 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl---~---~A~Gv~qIksQFYgLPKvFseSe  136 (142)
                      .++....+.+...--..-.++|+||++|++|+   +   ...|+..|++.|-++.+.|+..+
T Consensus        14 ~~v~~~~~a~~~~D~~~l~~l~a~D~~~~~p~~~~g~~~~~~G~~~i~~~~~~~~~~~~~~~   75 (150)
T 1s5a_A           14 ETLRKFMAYMLEKDMKSWTELWDENAVFEFPYAPEGSPKRIEGKAAIYDYIKDYPKQIHLSS   75 (150)
T ss_dssp             HHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTCCTTSCSEEESHHHHHHHHTTHHHHEEEEE
T ss_pred             HHHHHHHHHHhcCCHHHHHHhCCCCEEEEeecCCCCCCccccCHHHHHHHHHHhhhcCCccc
Confidence            36666666666555555667899999999995   3   57999999999988888776533

>3k0z_A Putative polyketide cyclase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS lipoprotein; HET: NHE; 1.91A {Bacillus cereus}

Probab=94.39  E-value=0.019  Score=40.66  Aligned_cols=56  Identities=7%  Similarity=-0.052  Sum_probs=44.9

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCcc-cccccHHHHHHHHHhhhhhccccc
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPL-MCAHGVKQIKSAFYAISKVGQEAS  136 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl-~~A~Gv~qIksQFYgLPKvFseSe  136 (142)
                      .|+....+.|+..--..-.++|+||++|+||. +...|+..+++.|-.+-..|++.+
T Consensus        38 ~~v~~~~~a~~~~d~~~l~~~~a~D~v~~~p~~g~~~G~e~~~~~~~~~~~~~pd~~   94 (159)
T 3k0z_A           38 HAAQRFYAFWDTGKEELIPQTVTENFFDHTLPKGRPQGTEGLKFAAQNFRKIVPNIH   94 (159)
T ss_dssp             HHHHHHHHHHHHCCGGGHHHHEEEEEEESSCCTTCCSSHHHHHHHHHHHHTTCCSEE
T ss_pred             HHHHHHHHHHhcCCHHHHHHHcCCCeEEecCCCCCCCCHHHHHHHHHHHHHhCCCcE
Confidence            37777777887765566667899999999997 688999999998888877776544

>3ff2_A Uncharacterized cystatin fold protein (YP_497570. NTF2 superfamily; structural genomics; 1.90A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}

Probab=94.30  E-value=0.015  Score=38.34  Aligned_cols=56  Identities=9%  Similarity=0.014  Sum_probs=47.1

Q ss_pred             hchHHHHHHHhCCCCCccccccccCCCcccCc--ccccccHHHHHHHHHhhhhhcccc
Q 032367           80 DDIMPHILNLYGSCATSHDFEIYAPHASFEDP--LMCAHGVKQIKSAFYAISKVGQEA  135 (142)
Q Consensus        80 ~~Il~~IleLYsc~PT~edFeiYApdAtFEDP--l~~A~Gv~qIksQFYgLPKvFseS  135 (142)
                      ..++....+.|+..--..-.+.|++|+++++|  -....|+..|++.|-.+-+.|++.
T Consensus         5 ~~~v~~~~~a~n~~D~~~~~~~~a~D~v~h~~~~~~~~~G~~~~~~~~~~~~~~~p~~   62 (117)
T 3ff2_A            5 LETAKAMIAAYNAQDVDTYVSYMTDDACEANYRGDVVREGKEGTRSGLAAAFARWPQN   62 (117)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHTTEEEEEEEEETTSCEEECHHHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHHHHHcccCHHHHHHhcCCcEEEEeCCCCccccCHHHHHHHHHHHHhhCCCc
Confidence            45888899999988887778889999999998  457899999999988887777653

>3ebt_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; 1.30A {Burkholderia pseudomallei K96243} SCOP: d.17.4.9

Probab=94.01  E-value=0.013  Score=38.60  Aligned_cols=56  Identities=11%  Similarity=0.123  Sum_probs=43.6

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCcc--------cccccHHHHHHHHHhhhhhccccc
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPL--------MCAHGVKQIKSAFYAISKVGQEAS  136 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl--------~~A~Gv~qIksQFYgLPKvFseSe  136 (142)
                      .++....+-++..--..-.++|+||++|++|-        +...|+..|++-|-.+.+.|+..+
T Consensus         7 ~~v~~~~~a~~~~d~~~~~~l~a~D~~~~~~~~~~p~~~~~~~~G~~~~~~~~~~~~~~~~~~~   70 (132)
T 3ebt_A            7 QTVRESYEAFHRRDLPGVLAALAPDVRWTHPDGMSPYGLGGTKHGHDEVIAFIRHVPTHIAEMR   70 (132)
T ss_dssp             HHHHHHHHHHHTTCHHHHHTTEEEEEEEEECGGGGGGTCCEEEEHHHHHHHHHHHGGGTEEEEE
T ss_pred             HHHHHHHHHHhccCHHHHHHhcCCCEEEEeCCCCCCcccCCcCcCHHHHHHHHHHHHhhCCceE
Confidence            36666666677666666678899999999984        588999999988888888876543

>1nww_A Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {Rhodococcus erythropolis} SCOP: d.17.4.8 PDB: 1nu3_A*

Probab=93.95  E-value=0.039  Score=37.23  Aligned_cols=53  Identities=13%  Similarity=0.167  Sum_probs=40.7

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCcc-cccccHHHHHHHHHhhhhhcc
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPL-MCAHGVKQIKSAFYAISKVGQ  133 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl-~~A~Gv~qIksQFYgLPKvFs  133 (142)
                      .++....+-++..--..-.++|++|++|+||- ....|+..|++-|-++.+.|+
T Consensus        26 ~~v~~~~~a~~~~D~~~l~~l~a~D~~~~~~~~~~~~G~~~i~~~~~~~~~~~~   79 (149)
T 1nww_A           26 KIVLEFMDALTSNDAAKLIEYFAEDTMYQNMPLPPAYGRDAVEQTLAGLFTVMS   79 (149)
T ss_dssp             HHHHHHHHHGGGCCHHHHHTTBCSSCEEEETTSCCEESHHHHHHHHHHHHHHEE
T ss_pred             HHHHHHHHHHhcCCHHHHHHHhCCCEEEEcCCCCCccCHHHHHHHHHHHHhhCC
Confidence            46666666666555555567899999999984 467899999998888887765

>1z1s_A Hypothetical protein PA3332; beta barrel, conserved hypothetical protein, structural genomics, PSI, protein structure initiative; HET: PGE; 1.49A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.10

Probab=93.93  E-value=0.015  Score=40.97  Aligned_cols=54  Identities=17%  Similarity=0.198  Sum_probs=41.4

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCccc------ccccHHHHHHHHHhhhhhccc
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPLM------CAHGVKQIKSAFYAISKVGQE  134 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~------~A~Gv~qIksQFYgLPKvFse  134 (142)
                      .++....+.++..--..-.++|+||++|++|..      ...|+..|++-|-.+...|+.
T Consensus        27 ~~v~~~~~a~~~~D~~~l~~l~a~D~v~~~P~~~~g~~~~~~G~~ai~~~~~~~~~~~~~   86 (163)
T 1z1s_A           27 EILVHSLRLLENGDARGWCDLFHPEGVLEFPYAPPGWKTRFEGRETIWAHMRLFPEHLTV   86 (163)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHTEEEEEEEECSSCCTTSCCEEESHHHHHHTTTTGGGTEEE
T ss_pred             HHHHHHHHHHHCCCHHHHHHHCCCCEEEECcCCCCCCCcccCCHHHHHHHHHHHHHhCcc
Confidence            366667776666555566678999999999953      478999999988888777664

>3fgy_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.59A {Burkholderia xenovorans LB400} SCOP: d.17.4.0

Probab=93.88  E-value=0.015  Score=38.55  Aligned_cols=58  Identities=12%  Similarity=0.095  Sum_probs=44.0

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCcc-----cccccHHHHHHHHHhhhhhccccccC
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPL-----MCAHGVKQIKSAFYAISKVGQEASQE  138 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl-----~~A~Gv~qIksQFYgLPKvFseSei~  138 (142)
                      .|+....+.++..--..-.++|+||++|++|-     +...|+..|++-|-.+...|+..+..
T Consensus         9 ~~v~~~~~a~~~~d~~~~~~l~a~D~~~~~p~~~p~~g~~~G~~~i~~~~~~~~~~~~~~~~~   71 (135)
T 3fgy_A            9 QIVKDFFAAMGRGDKKGLLAVSAEDIEWIIPGEWPLAGTHRGHAALAALLQKASEMVEISYPE   71 (135)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHTEEEEEEEEECSSSTTCEEEEHHHHHHHHHHHHHHHEEEECSS
T ss_pred             HHHHHHHHHHHcCCHHHHHHhcCCCeEEEEcCCCccceEEeCHHHHHHHHHHHHHhhCcceee
Confidence            36666666666665556668899999999986     35689999998888888888765443

>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} SCOP: d.17.4.9

Probab=93.57  E-value=0.026  Score=39.29  Aligned_cols=55  Identities=5%  Similarity=-0.028  Sum_probs=43.9

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCcccccccHHHHHHHHHhhhhhccccc
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPLMCAHGVKQIKSAFYAISKVGQEAS  136 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~~A~Gv~qIksQFYgLPKvFseSe  136 (142)
                      .++....+.++..--..-.++|+||++|+|| +...|+..|++-|-.+-..|++.+
T Consensus         8 ~~v~~~~~a~~~~D~~~~~~~~a~D~v~~~p-~~~~G~~~~~~~~~~~~~~~~~~~   62 (158)
T 2gey_A            8 ALCLEMVAAWNRWDLSGIIKHWSPDIVHYSE-DNEVSSADMVKLMEGGLKAFPDLQ   62 (158)
T ss_dssp             HHHHHHHHHHHTTCTHHHHTTEEEEEEEEET-TEEECHHHHHHHHHHHHHHSTTCE
T ss_pred             HHHHHHHHHHcCCCHHHHHHHcCCCeEEeCC-CCCCCHHHHHHHHHHHHHhCCCcE
Confidence            3677777777776666666789999999999 577999999998888887776543

>1sjw_A Nogalonic acid methyl ester cyclase; anthracyclines, nogalamycin, snoal, aldol condensation, LYAS structural genomics; HET: NGV; 1.35A {Streptomyces nogalater} SCOP: d.17.4.9

Probab=93.49  E-value=0.037  Score=36.96  Aligned_cols=53  Identities=13%  Similarity=0.078  Sum_probs=42.4

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCccccc--ccHHHHHHHHHhhhhhcc
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPLMCA--HGVKQIKSAFYAISKVGQ  133 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~~A--~Gv~qIksQFYgLPKvFs  133 (142)
                      .++....+.++..--..-.++|+||++++||..-.  .|+..|++.|-.+-+.|+
T Consensus         6 ~~v~~~~~a~~~~d~~~~~~~~a~d~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~   60 (144)
T 1sjw_A            6 EIVRRMVSAFNTGRTDDVDEYIHPDYLNPATLEHGIHTGPKAFAQLVGWVRATFS   60 (144)
T ss_dssp             HHHHHHHHHHHHCCCTTGGGTEEEEEECGGGGGGTCCSHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCHHHHHHHcCcCeEEccCCCCCCCCCHHHHHHHHHHHHHhCC
Confidence            36777777777665566678899999999997653  899999988888877776

>3f9s_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative; 1.76A {Acidithiobacillus ferrooxidans atcc 23}

Probab=93.45  E-value=0.052  Score=36.74  Aligned_cols=56  Identities=13%  Similarity=0.148  Sum_probs=44.3

Q ss_pred             chHHHHHH-HhCCCCCccccccccCCCc-ccCcc----cccccHHHHHHHHHhhhhhccccc
Q 032367           81 DIMPHILN-LYGSCATSHDFEIYAPHAS-FEDPL----MCAHGVKQIKSAFYAISKVGQEAS  136 (142)
Q Consensus        81 ~Il~~Ile-LYsc~PT~edFeiYApdAt-FEDPl----~~A~Gv~qIksQFYgLPKvFseSe  136 (142)
                      .|+....+ +++..-...-.++|+||++ ++||.    +...|+..+++-|-.+-..|++-+
T Consensus        10 ~~v~~~~~~~~~~~d~~~~~~~~a~d~~~~~~p~~~~~g~~~G~~~~~~~~~~~~~~~pd~~   71 (146)
T 3f9s_A           10 EILTQFTREVWSEGNIEASDKYIAPKYTVLHDPGDPWEGRELDVAGYKERVKTLRAAFPDQC   71 (146)
T ss_dssp             HHHHHHHHHHTTTCCGGGHHHHEEEEEEEEECTTCTTTTCEECHHHHHHHHHHHHHHSTTCE
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHcCCCeeeccCCCCCCCCCcCCHHHHHHHHHHHHhhCCCcE
Confidence            37777774 8877766666778999999 99994    578999999998888877776543

>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} SCOP: d.17.4.9

Probab=93.35  E-value=0.028  Score=38.57  Aligned_cols=55  Identities=7%  Similarity=0.012  Sum_probs=41.7

Q ss_pred             hHHHHHHHhCCCCCccccccccCCCcccCcccccccHHHHHHHHHhhhhhccccc
Q 032367           82 IMPHILNLYGSCATSHDFEIYAPHASFEDPLMCAHGVKQIKSAFYAISKVGQEAS  136 (142)
Q Consensus        82 Il~~IleLYsc~PT~edFeiYApdAtFEDPl~~A~Gv~qIksQFYgLPKvFseSe  136 (142)
                      ++....+.++..--..-.++|+||++|+||-+...|+..|++-|-.+-+.|+..+
T Consensus         9 ~v~~~~~a~~~~d~~~~~~~~a~D~v~~~~~~~~~G~~~~~~~~~~~~~~~~~~~   63 (152)
T 2gex_A            9 RCLEMVAAWNRWDVSGVVAHWAPDVVHYDDEDKPVSAEEVVRRMNSAVEAFPDLR   63 (152)
T ss_dssp             HHHHHHHHHHTTCHHHHHTTEEEEEEEECTTSCEECHHHHHHHHHHHHHHCTTCE
T ss_pred             HHHHHHHHHhCCCHHHHHHHcCCCeEEeCCCCCCCCHHHHHHHHHHHHHhCCCcE
Confidence            5566666665544445557899999999987888999999998888877776544

>2f99_A Aklanonic acid methyl ester cyclase, AKNH; anthracycline,polyketide cyclase,stereoselectivity, aklavino biosynthetic protein; HET: AKV; 1.90A {Streptomyces galilaeus} SCOP: d.17.4.9 PDB: 2f98_A*

Probab=93.20  E-value=0.041  Score=38.19  Aligned_cols=52  Identities=12%  Similarity=0.071  Sum_probs=42.1

Q ss_pred             hHHHHHHHhCCCCCccccccccCCCcccCcccc--cccHHHHHHHHHhhhhhcc
Q 032367           82 IMPHILNLYGSCATSHDFEIYAPHASFEDPLMC--AHGVKQIKSAFYAISKVGQ  133 (142)
Q Consensus        82 Il~~IleLYsc~PT~edFeiYApdAtFEDPl~~--A~Gv~qIksQFYgLPKvFs  133 (142)
                      ++....+.++..--..-.++|+||++|+||..-  ..|+..|++-|-.+-+.|+
T Consensus        16 ~v~~~~~a~~~~d~~~~~~~~a~D~v~~~p~~~~~~~G~~~~~~~~~~~~~~~p   69 (153)
T 2f99_A           16 AVRRMVEAYNTGKTDDVADYIHPEYMNPGTLEFTSLRGPELFAINVAWVKKTFS   69 (153)
T ss_dssp             HHHHHHHHHHHCCCTTGGGTEEEEEECGGGTTTCCCCHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCHHHHHHhcCCCeEEecCCCCCCCCCHHHHHHHHHHHHHHCC
Confidence            666677777766666677889999999999876  4899999998888877776

>3fh1_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=92.86  E-value=0.059  Score=36.09  Aligned_cols=52  Identities=13%  Similarity=0.131  Sum_probs=41.2

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCcc----cc-cccHHHHHHHHHhhhhhcc
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPL----MC-AHGVKQIKSAFYAISKVGQ  133 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl----~~-A~Gv~qIksQFYgLPKvFs  133 (142)
                      .++....+.++..-...-.++|+||++|+||.    +. ..|+..|++.|-+ -..|+
T Consensus        21 ~~v~~~~~a~~~~D~~~l~~l~a~D~v~~~p~~~~~g~~~~G~~~i~~~~~~-~~~~~   77 (129)
T 3fh1_A           21 EIMRRFNDVFQLHDPAALPELIAEECVIENTVPAPDGARHAGRQACVQLWSA-IATQP   77 (129)
T ss_dssp             HHHHHHHHHHHTTCGGGHHHHEEEEEEEECSCSTTTCCEEESHHHHHHHHHH-HHHCT
T ss_pred             HHHHHHHHHHHccCHHHHHHhcCCCEEEECCCCCCCCCcccCHHHHHHHHHH-HhcCC
Confidence            47888888888877777888899999999984    33 4899999998876 44454

>3g0k_A Putative membrane protein; snoal-like polyketide cyclase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.30A {Novosphingobium aromaticivorans}

Probab=92.21  E-value=0.1  Score=37.02  Aligned_cols=53  Identities=15%  Similarity=0.135  Sum_probs=43.4

Q ss_pred             hHHHHHH-HhCCCCCccccccccCCCcccCcccccccHHHHHHHHHhhhhhcccc
Q 032367           82 IMPHILN-LYGSCATSHDFEIYAPHASFEDPLMCAHGVKQIKSAFYAISKVGQEA  135 (142)
Q Consensus        82 Il~~Ile-LYsc~PT~edFeiYApdAtFEDPl~~A~Gv~qIksQFYgLPKvFseS  135 (142)
                      |+....+ +|+..-...-.++|+||.++++|. ...|+..+++.|-.+-+.|+.-
T Consensus        32 lV~~f~~~a~~~~D~~~~~~~~a~D~v~h~P~-~~~G~e~~~~~~~~~~~~~pd~   85 (148)
T 3g0k_A           32 LVIEMYNKVLIAMDSSAVDRYIAPGYVQHSSL-AEPSVEALKGFLDRVRAESPDA   85 (148)
T ss_dssp             HHHHHHHHTTTTTCGGGGGGTEEEEEEECCSS-SCSSHHHHHHHHHHHHHHCCSC
T ss_pred             HHHHHHHHHHhcCCHHHHHHhcCcCeEEcCCC-CCCCHHHHHHHHHHHHHhCCCc
Confidence            6777777 887776667778899999999995 5799999999888888877653

>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}

Probab=92.16  E-value=0.05  Score=42.78  Aligned_cols=50  Identities=14%  Similarity=0.253  Sum_probs=40.8

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCccc--ccccHHHHHHHHHhhhh
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPLM--CAHGVKQIKSAFYAISK  130 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~--~A~Gv~qIksQFYgLPK  130 (142)
                      .+++...+..+..-...-.++|++||+|+||++  .-.|+..|++-|-.+..
T Consensus       142 ~~v~~~~~a~~~~D~~~l~~l~a~D~v~~~P~~~~~~~G~~ai~~~~~~~~~  193 (283)
T 3rga_A          142 ELAREHCLRINDGDVDGLLKLYSPRIRFEDPVGSWTRTGLEALRAHATMAVG  193 (283)
T ss_dssp             HHHHHHHHHHHTTCHHHHHTTEEEEEEEESSTTSCEEESHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCHHHHHHhcCCCeEEECCCCCCcccCHHHHHHHHHHhhc
Confidence            366777777777777778889999999999987  47999999998877654

>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}

Probab=92.08  E-value=0.043  Score=43.14  Aligned_cols=53  Identities=13%  Similarity=0.155  Sum_probs=38.3

Q ss_pred             hHHHHHHHhCCCCCccccccccCCCcccCccc--ccccHHHHHHHHHhhhhhccc
Q 032367           82 IMPHILNLYGSCATSHDFEIYAPHASFEDPLM--CAHGVKQIKSAFYAISKVGQE  134 (142)
Q Consensus        82 Il~~IleLYsc~PT~edFeiYApdAtFEDPl~--~A~Gv~qIksQFYgLPKvFse  134 (142)
                      ++....+..+..--..--++||+||+|+||++  ...|+..|++-|-.+-..|..
T Consensus        11 ~v~~~~~~~~~~D~~~l~~l~a~Dav~~~P~~~~~~~Gr~ai~~~~~~~~~~~~~   65 (283)
T 3rga_A           11 VALEYCRRVNAGELEGVLQLFAPDARLVDPLGTEPVVGRAALAARLAPALRGAVH   65 (283)
T ss_dssp             HHHHHHHHHHHTCHHHHHHTEEEEEEEECSSSSCCEESHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHHHHhcCCHHHHHHhcCCCEEEECCCCCCCcCcHHHHHHHHHHHHhhcCc
Confidence            44444444444444556678999999999987  579999999988777666643

>2gxf_A Hypothetical protein YYBH; alpha-beta protein., structural genomics, PSI, protein structure initiative; HET: MES; 3.10A {Bacillus subtilis} SCOP: d.17.4.22

Probab=91.96  E-value=0.061  Score=36.58  Aligned_cols=52  Identities=23%  Similarity=0.216  Sum_probs=37.9

Q ss_pred             hHHHHHHHhCCCCCccccccccCCCcc-cCcccccccHHHHHHHHHhhhhhcc
Q 032367           82 IMPHILNLYGSCATSHDFEIYAPHASF-EDPLMCAHGVKQIKSAFYAISKVGQ  133 (142)
Q Consensus        82 Il~~IleLYsc~PT~edFeiYApdAtF-EDPl~~A~Gv~qIksQFYgLPKvFs  133 (142)
                      ++....+.+...--..-.++|++||+| .+|-....|+.+|++.|-++.+.|.
T Consensus         8 l~~~~~~A~~~~D~d~~~~lfa~Dav~~~~~g~~~~G~~aI~~~~~~~~~~~~   60 (142)
T 2gxf_A            8 IISACDLAIQNEDFDTLMNYYSEDAVLVVKPGMIARGKEEIKKAFITIANYFN   60 (142)
T ss_dssp             HHHHHHHHHHTTCHHHHTTSEEEEEEEECSSSCEEEHHHHHHHHHHHTTSCCC
T ss_pred             HHHHHHHHHHcCCHHHHHHhcCCCEEEEcCCCCcccCHHHHHHHHHHHHHhhC
Confidence            344444555555555566789999999 6776678999999999988776553

>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}

Probab=91.78  E-value=0.066  Score=34.43  Aligned_cols=44  Identities=18%  Similarity=0.179  Sum_probs=31.8

Q ss_pred             HHHhCCCCCccccccccCCCcccCccc-ccccHHHHHHHHHhhhh
Q 032367           87 LNLYGSCATSHDFEIYAPHASFEDPLM-CAHGVKQIKSAFYAISK  130 (142)
Q Consensus        87 leLYsc~PT~edFeiYApdAtFEDPl~-~A~Gv~qIksQFYgLPK  130 (142)
                      .+-+...--..-.++|+|||+|.||-+ ...|+..|++.|-++..
T Consensus        16 ~~a~~~~D~~~~~~l~a~Da~~~~~~~~~~~G~~~i~~~~~~~~~   60 (129)
T 3hx8_A           16 VKAYNSKDAAGVASKYMDDAAAFPPDMARVDGRQNIQKLWQGAMD   60 (129)
T ss_dssp             HHHHHTTCHHHHHTTEEEEEEEECTTSCCEESHHHHHHHHHHHHH
T ss_pred             HHHHHcCCHHHHHHhhCCCeEEeCCCCCcccCHHHHHHHHHHHHh
Confidence            333444444445678999999999964 57999999998876644

>3kkg_A Putative snoal-like polyketide cyclase; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, lyase; HET: MSE PGE; 1.40A {Jannaschia SP}

Probab=91.37  E-value=0.035  Score=37.74  Aligned_cols=55  Identities=9%  Similarity=-0.019  Sum_probs=38.7

Q ss_pred             hHHHHHH-HhCCCC--CccccccccCCCccc-CcccccccHHHHHHHHHhhhhhccccc
Q 032367           82 IMPHILN-LYGSCA--TSHDFEIYAPHASFE-DPLMCAHGVKQIKSAFYAISKVGQEAS  136 (142)
Q Consensus        82 Il~~Ile-LYsc~P--T~edFeiYApdAtFE-DPl~~A~Gv~qIksQFYgLPKvFseSe  136 (142)
                      |+....+ .++..-  -..-.++|+||++|+ +|.+...|+..+++.|-.+-..|++-+
T Consensus        14 ~v~~~~~~~~~~~d~~~~~~~~~~a~d~~~~~~~~~~~~G~~~~~~~~~~~~~~~pd~~   72 (146)
T 3kkg_A           14 TVLRLFDEGWGAQDGWRDVWRETMTPGFRSIFHSNQAVEGIEQAIAFNAVLFEGFPRLE   72 (146)
T ss_dssp             HHHGGGTTTSTTSTTHHHHHHHHEEEEEEEEETTSCCEESHHHHHHHHHHHHHHSTTCE
T ss_pred             HHHHHHHHHHcCCCcHHHHHHHHcCCCeEEecCCCCCCCCHHHHHHHHHHHHHhCCCce
Confidence            4444444 444443  334456799999999 566789999999998888888877543

>3i0y_A Putative polyketide cyclase; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG, protein structure initiative; HET: MSE UNL; 1.50A {Xanthomonas campestris PV}

Probab=91.19  E-value=0.065  Score=35.47  Aligned_cols=53  Identities=6%  Similarity=-0.003  Sum_probs=41.4

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCcc-cccccHHHHHHHHHhhhhhcc
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPL-MCAHGVKQIKSAFYAISKVGQ  133 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl-~~A~Gv~qIksQFYgLPKvFs  133 (142)
                      .|+....+-++..-...-.++|+||++|++|. ....|+..|+.-|-.++..|.
T Consensus        12 ~~v~~~~~a~~~~D~~~~~~l~a~D~~~~~p~~~~~~G~~~~~~~~~~~~~~~~   65 (140)
T 3i0y_A           12 GLVQAYYEAFNRGDWDAMLAFLAEDVAHDLNQGPREIGRAAFASFLQRMNDSYR   65 (140)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHTEEEEEEEECTTSCEEESHHHHHHHHHHHHHHEE
T ss_pred             HHHHHHHHHHHcCCHHHHHHHcCCcEEEEcCCCCceEcHHHHHHHHHHHhhhcc
Confidence            36666667776666666667899999999985 468999999998888887764

>3ec9_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.60A {Burkholderia thailandensis E264} SCOP: d.17.4.10

Probab=90.48  E-value=0.056  Score=36.20  Aligned_cols=55  Identities=9%  Similarity=0.038  Sum_probs=40.4

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCcc-----cccccHHHHHH-HHHhhhhhcccc
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPL-----MCAHGVKQIKS-AFYAISKVGQEA  135 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl-----~~A~Gv~qIks-QFYgLPKvFseS  135 (142)
                      .++....+.++..--..-.++|+||++|++|-     +...|+..|.+ -|-.+...|+..
T Consensus        16 ~~v~~~~~a~~~gD~~~~~~l~a~D~~~~~~~~~p~~g~~~G~~~i~~~~~~~~~~~~~~~   76 (140)
T 3ec9_A           16 QIVADHYAASDRHDPAAMMADIAPAIEWTEMAGFPCAGTYRSADEIVRNVFRRLGEEWDGY   76 (140)
T ss_dssp             HHHHHHHHHHHTTCHHHHHTTEEEEEEEEECTTSTTCEEECSHHHHHHHTHHHHHHHEEEE
T ss_pred             HHHHHHHHHHhCCCHHHHHHhcCCCeEEEEcCCCccceEEcCHHHHHHHHHHHHHhhCCcc
Confidence            36666666666665566678899999999985     46789999965 466677777643

>3dm8_A Uncharacterized protein RPA4348; siras, putative isomerase, structural genomics, PSI-2, prote structure initiative; HET: CE9; 1.80A {Rhodopseudomonas palustris} SCOP: d.17.4.20

Probab=89.79  E-value=0.064  Score=36.90  Aligned_cols=54  Identities=7%  Similarity=-0.066  Sum_probs=41.6

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCcc--------cccccHHHHHHHHHhhhhhccc
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPL--------MCAHGVKQIKSAFYAISKVGQE  134 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl--------~~A~Gv~qIksQFYgLPKvFse  134 (142)
                      .+++...+-++..--..-.++|+||++|++|-        +..+|+..|++-|-.+...|..
T Consensus         8 ~~v~~~~~a~~~gD~~~l~~l~a~Dv~~~~~g~~~~~p~~g~~~G~~av~~~~~~~~~~~~~   69 (143)
T 3dm8_A            8 RFSRALHRALNDRQTEELATIIDDNIDWAIYGPIDMFPFFGARQGKAAVLEVCRQIADSVRI   69 (143)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHHEEEEEEEEEESCTTTCTTCEEEESHHHHHHHHHHHHHHEEE
T ss_pred             HHHHHHHHHHHCCCHHHHHHhcCCCeEEEecCCCCcCCCCccccCHHHHHHHHHHHHHhcCc
Confidence            45666666666666666778899999999973        4679999999988888887654

>3ke7_A Putative ketosteroid isomerase; structural genomics, joint C structural genomics, JCSG, protein structure initiative; HET: MSE BCN; 1.45A {Parabacteroides distasonis atcc 8503}

Probab=89.78  E-value=0.15  Score=36.85  Aligned_cols=49  Identities=14%  Similarity=0.205  Sum_probs=34.9

Q ss_pred             hhchHHHHHHHhCCCCCccccccccCCCcccCcccc--cccHHHHHHHHHh
Q 032367           79 SDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLMC--AHGVKQIKSAFYA  127 (142)
Q Consensus        79 ~~~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~~--A~Gv~qIksQFYg  127 (142)
                      .+.||.--..+-...-...-+++|+||+||.||..-  -+|...|+.=|-.
T Consensus        16 ~~~i~~~~~~~L~~gD~~~~~~lyapDvt~fDp~~~~~~~G~~a~r~yf~~   66 (134)
T 3ke7_A           16 PEMIISLEKEALASTDPMAFVELSDTDVIYFDPSLETKIEGLEQLRTYYKG   66 (134)
T ss_dssp             HHHHHHHHHHHHHCSCTTHHHHHEEEEEEEECTTCSSCEESHHHHHHHHHH
T ss_pred             HHHHHHHhHHHHhCCCHHHHHHhcCCCEEEEcCCCccccCCHHHHHHHHHh
Confidence            334444444444566667777889999999999865  6899999865544

>3f7x_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}

Probab=89.66  E-value=0.1  Score=36.53  Aligned_cols=54  Identities=2%  Similarity=0.019  Sum_probs=42.5

Q ss_pred             hchHHHHHHHhCCCCCccccccccCCCcccCccc-ccccHHHHHHHHHhhhhhcc
Q 032367           80 DDIMPHILNLYGSCATSHDFEIYAPHASFEDPLM-CAHGVKQIKSAFYAISKVGQ  133 (142)
Q Consensus        80 ~~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~-~A~Gv~qIksQFYgLPKvFs  133 (142)
                      +.++....+-++..-...-.++|+||++|+.|.+ ...|+..|++-|-.++..|.
T Consensus        23 ~~lv~~~~~a~~~~D~~~l~~l~a~D~v~~~p~g~~~~G~e~i~~~~~~~~~~~~   77 (151)
T 3f7x_A           23 TELVNAYYAAFNAGDMPAFLALLSEDVIHDINQGERQMGKARFAAFMEKMNRCYR   77 (151)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHTEEEEEEEECTTSCEEESHHHHHHHHHHHHHHEE
T ss_pred             HHHHHHHHHHHHcCCHHHHHHhcCCCEEEECCCCCCcCCHHHHHHHHHHHHHhhc
Confidence            3477777777776666666788999999998765 68899999998888887764

>2k54_A Protein ATU0742; protein of unknown function, structural genomics, PSI-2, Pro structure initiative; NMR {Agrobacterium tumefaciens str} SCOP: d.17.4.29

Probab=89.42  E-value=0.073  Score=34.99  Aligned_cols=49  Identities=10%  Similarity=0.047  Sum_probs=39.6

Q ss_pred             hchHHHHHHHhCCCCCccccccccCCCcccCccc--ccccHHHHHHHHHhh
Q 032367           80 DDIMPHILNLYGSCATSHDFEIYAPHASFEDPLM--CAHGVKQIKSAFYAI  128 (142)
Q Consensus        80 ~~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~--~A~Gv~qIksQFYgL  128 (142)
                      ..++....+.|+..-...-.+.|++|++++||-+  ...|+..|++-|-.+
T Consensus         6 ~~~v~~~~~a~n~~D~~~~~~~~a~D~~~~~~~g~~~~~G~~ai~~~~~~~   56 (123)
T 2k54_A            6 ELPVQKQLEAYNARDIDAFMAWWADDCQYYAFPATLLAGNAAEIRVRHIER   56 (123)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHTEEEEEEEEETTTEEEEESHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCHHHHHhhcCCceEEEcCCCCcccCCHHHHHHHHHHH
Confidence            3477888888888877778888999999999765  578999998877544

>3ehc_A Snoal-like polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.12A {Agrobacterium tumefaciens str}

Probab=89.19  E-value=0.39  Score=31.76  Aligned_cols=54  Identities=9%  Similarity=-0.049  Sum_probs=42.4

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCcccccccHHHHHHHHHhhhhhcccccc
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPLMCAHGVKQIKSAFYAISKVGQEASQ  137 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~~A~Gv~qIksQFYgLPKvFseSei  137 (142)
                      .|+....+.++..--..--++|+||++|++   ...|+..+++.|-.+-..|++-+.
T Consensus         7 ~~v~~~~~~~~~~d~~~~~~~~a~d~~~~~---~~~G~~~~~~~~~~~~~~~pd~~~   60 (128)
T 3ehc_A            7 DIYLAYLDSLNHQAFDELGTFVDDNVEHNG---RPFGLSGYRDMLVKDFADIPDLRF   60 (128)
T ss_dssp             HHHHHHHHHHHTTCGGGGGGTEEEEEEETT---BCCHHHHHHHHHHHHHHHCTTCCC
T ss_pred             HHHHHHHHHHhcCCHHHHHHhcCcceEeCC---CCCCHHHHHHHHHHHHhhCCCceE
Confidence            377777777777666666778999999997   458999999888888888876544

>3dmc_A NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, unknow function; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.17.4.10

Probab=88.28  E-value=0.18  Score=34.92  Aligned_cols=55  Identities=11%  Similarity=0.052  Sum_probs=45.2

Q ss_pred             hhchHHHHHHHhCCCCCccccccccCCCcccCccc----ccccHHHHHHHHHhhhhhcc
Q 032367           79 SDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLM----CAHGVKQIKSAFYAISKVGQ  133 (142)
Q Consensus        79 ~~~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~----~A~Gv~qIksQFYgLPKvFs  133 (142)
                      .+.++.+.++..+..-...-.+++|||++++.|-.    ...|+..|+..|-++...|.
T Consensus        14 ~~~~~~~f~~A~~~gD~~~l~~lla~D~v~~~pg~~~~g~~~G~~~v~~~~~~~~~~~~   72 (134)
T 3dmc_A           14 AHQGFEFFTQGLATGEWQKFLDMLTEDFTFWFPMGEFHGLNVGKERAKEFFTYVSESFH   72 (134)
T ss_dssp             HHHHHHHHHHHHHHSCCHHHHTTEEEEEEEEESSGGGBEEEESHHHHHHHHHHHHHTCT
T ss_pred             HHHHHHHHHHHHHcCCHHHHHHHcCCCEEEEecCCCCCccchhHHHHHHHHHHHHHhhc
Confidence            34466666666677777888899999999999986    68899999998888888876

>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27

Probab=88.07  E-value=0.21  Score=32.38  Aligned_cols=46  Identities=11%  Similarity=0.203  Sum_probs=32.4

Q ss_pred             HHHHHhCCCCCccccccccCCCcccCcccc-cccHHHHHHHHHhhhh
Q 032367           85 HILNLYGSCATSHDFEIYAPHASFEDPLMC-AHGVKQIKSAFYAISK  130 (142)
Q Consensus        85 ~IleLYsc~PT~edFeiYApdAtFEDPl~~-A~Gv~qIksQFYgLPK  130 (142)
                      ...+.+...--..-.++|+|||+|.+|-+. ..|+..|++.|-.+..
T Consensus        19 ~~~~a~~~~D~~~~~~l~a~D~v~~~~~~~~~~G~~ai~~~~~~~~~   65 (135)
T 3d9r_A           19 AYLTAFNRADIPAVIATYTDDGVLMGPGRPAAVGKDELAEVYLSVFE   65 (135)
T ss_dssp             HHHHHHHTTCHHHHHHTEEEEEEEECTTSCCEESHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCHHHHHHhcCCCEEEECCCCCcccCHHHHHHHHHHHHh
Confidence            333333444444556789999999998764 4699999998887654

>3flj_A Uncharacterized protein conserved in bacteria WIT cystatin-like fold; YP_168589.1; HET: MSE; 2.00A {Silicibacter pomeroyi dss-3}

Probab=87.73  E-value=0.26  Score=36.92  Aligned_cols=53  Identities=13%  Similarity=0.152  Sum_probs=45.0

Q ss_pred             hHHHHHHHhCCCCCccccccccCCCcccCccc--ccccHHHHHHHHHhhhhhccc
Q 032367           82 IMPHILNLYGSCATSHDFEIYAPHASFEDPLM--CAHGVKQIKSAFYAISKVGQE  134 (142)
Q Consensus        82 Il~~IleLYsc~PT~edFeiYApdAtFEDPl~--~A~Gv~qIksQFYgLPKvFse  134 (142)
                      ++....+..+..-...-.++||||++|++|..  .-.|+..++.-|-++-.+|..
T Consensus        23 ~v~~f~~A~~~gD~~aL~~LlA~Dvv~~sP~~~~p~~Gr~av~~~l~~~~~~~~d   77 (155)
T 3flj_A           23 TIARMQEVVAKGDESLIHALLAEDVRFMPPTYYKTWTGRDPVAAVLGHVGQVFSE   77 (155)
T ss_dssp             HHHHHHHHHTTTCHHHHHTTEEEEEEEECSSSSCCEESHHHHHHHHHHHHHHEEE
T ss_pred             HHHHHHHHHHhCCHHHHHHhcCCCEEEECCCCCCCcCCHHHHHHHHHHHHhhCCC
Confidence            77777888888888888899999999999965  456999999999998888863

>3h51_A Putative calcium/calmodulin dependent protein KIN association domain; NP_636218.1; HET: MSE PG4; 1.70A {Xanthomonas campestris PV}

Probab=87.33  E-value=0.23  Score=34.28  Aligned_cols=41  Identities=15%  Similarity=0.175  Sum_probs=30.6

Q ss_pred             CCCCccccccccCCCcccCccc--ccccHHHHHHHHHhhhhhc
Q 032367           92 SCATSHDFEIYAPHASFEDPLM--CAHGVKQIKSAFYAISKVG  132 (142)
Q Consensus        92 c~PT~edFeiYApdAtFEDPl~--~A~Gv~qIksQFYgLPKvF  132 (142)
                      .+--..-.++|++|++|.||.+  ...|+..|++.|-.+...+
T Consensus        35 ~~D~~~l~~l~a~Dav~~~~~~~~~~~G~~~i~~~~~~~~~~~   77 (156)
T 3h51_A           35 TGNPHKVADLYAPDGVLLPTVSNEVRASREQIENYFEMFLTKK   77 (156)
T ss_dssp             HTCHHHHHTTEEEEEEEECSSCSSCBCSHHHHHHHHHHHGGGC
T ss_pred             cCCHHHHHhhcCCCEEEecCCCCccccCHHHHHHHHHHHHhhC
Confidence            3333444577999999999874  5789999999987765543

>1tuh_A BAL32A, hypothetical protein EGC068; unknown function; 1.85A {Uncultured bacterium} SCOP: d.17.4.11

Probab=86.73  E-value=0.17  Score=34.73  Aligned_cols=51  Identities=16%  Similarity=0.134  Sum_probs=38.2

Q ss_pred             hHHHHHHHhCCCCCccccccccCCCcccCcccc-----cccHHHHHHHHHhhhhhc
Q 032367           82 IMPHILNLYGSCATSHDFEIYAPHASFEDPLMC-----AHGVKQIKSAFYAISKVG  132 (142)
Q Consensus        82 Il~~IleLYsc~PT~edFeiYApdAtFEDPl~~-----A~Gv~qIksQFYgLPKvF  132 (142)
                      ++....+.++..--..-.++|+||++|++|..-     ..|+..|++-|-.+...+
T Consensus        34 ~v~~~~~a~~~gD~~~l~~l~a~D~~~~~~~~~~~~g~~~G~~~i~~~~~~~~~~~   89 (156)
T 1tuh_A           34 TVRRGYAAFNSGDMKTLTELFDENASWHTPGRSRIAGDHKGREAIFAQFGRYGGET   89 (156)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHEEEEEEEEECSSSTTCEEEESHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhCCCHHHHHHhcCCCEEEEccCCCCccceEcCHHHHHHHHHHHHhhc
Confidence            566666666655555666789999999999763     589999988777776554

>3g8z_A Protein of unknown function with cystatin-like FO; NP_639274.1, snoal-like polyketide cyclase; HET: MSE; 1.90A {Xanthomonas campestris PV}

Probab=86.61  E-value=0.18  Score=34.96  Aligned_cols=52  Identities=12%  Similarity=0.138  Sum_probs=38.8

Q ss_pred             hHHHHHHHhCCCCCccccccccCCCcccCccc-----ccccHHHHHHHHHhhhhhcc
Q 032367           82 IMPHILNLYGSCATSHDFEIYAPHASFEDPLM-----CAHGVKQIKSAFYAISKVGQ  133 (142)
Q Consensus        82 Il~~IleLYsc~PT~edFeiYApdAtFEDPl~-----~A~Gv~qIksQFYgLPKvFs  133 (142)
                      ++....+-+...--..-.++|+||++|++|..     ...|+..|++-|-++...|+
T Consensus        25 ~v~~~~~a~~~gD~~~l~~l~a~D~v~~~p~~~~~~g~~~G~~~v~~~~~~~~~~~~   81 (148)
T 3g8z_A           25 IAKSYITAIQTGDHATLGSIISPDVIWHQPGNHQFSGTHRGMAVVGPMLGKMMEVSN   81 (148)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHEEEEEEEEECSSSTTCEEEESHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcCCHHHHHHHcCCCEEEEcCCCCCCCceEcCHHHHHHHHHHHHHhcC
Confidence            56666666654444555677999999999965     35899999998877777775

>2bng_A MB2760; epoxide hydrolase, limonene, hydrolase, structural proteomics in europe, spine, structural genomics; 2.5A {Mycobacterium tuberculosis} SCOP: d.17.4.8

Probab=83.41  E-value=0.3  Score=33.24  Aligned_cols=52  Identities=8%  Similarity=0.010  Sum_probs=37.7

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCc-ccccccHHHHHHHHHhhhhhc
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDP-LMCAHGVKQIKSAFYAISKVG  132 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDP-l~~A~Gv~qIksQFYgLPKvF  132 (142)
                      .++....+-++..--..-.++|+||++|++| .....|+..|++-|-++...|
T Consensus        19 ~~v~~f~~a~~~gD~~~l~~l~a~D~v~~~~~~~~~~G~~~i~~~~~~~~~~~   71 (149)
T 2bng_A           19 RAVEAFLNALQNEDFDTVDAALGDDLVYENVGFSRIRGGRRTATLLRRMQGRV   71 (149)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHEEEEEEEEETTTEEEECHHHHHHHHHTTTTTC
T ss_pred             HHHHHHHHHHhcCCHHHHHHHcCCCEEEEeCCCCCccCHHHHHHHHHHHHhhc
Confidence            3566666666554445556789999999954 456789999999888877655

>2rfr_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.16A {Novosphingobium aromaticivorans} SCOP: d.17.4.28

Probab=82.68  E-value=0.36  Score=32.57  Aligned_cols=31  Identities=10%  Similarity=0.147  Sum_probs=26.5

Q ss_pred             cccccCCCcccCccccc-ccHHHHHHHHHhhh
Q 032367           99 FEIYAPHASFEDPLMCA-HGVKQIKSAFYAIS  129 (142)
Q Consensus        99 FeiYApdAtFEDPl~~A-~Gv~qIksQFYgLP  129 (142)
                      .++|+|||+|..|.+.. .|+..|++.|-+++
T Consensus        41 ~~lf~~Da~~~~~~g~~~~G~~~i~~~~~~~~   72 (155)
T 2rfr_A           41 SELWVEDGEYAVVGFATAKGRAAIAALIDGQT   72 (155)
T ss_dssp             HTTEEEEEEEEETTSCCEESHHHHHHHHHSHH
T ss_pred             HhhcCCceEEEcCCCccccCHHHHHHHHHhcc
Confidence            36799999999998777 99999999887764

>3g16_A Uncharacterized protein with cystatin-like fold; YP_001022489.1, protein of unknown function with cystatin-LI structural genomics; HET: MSE; 1.45A {Methylibium petroleiphilum PM1}

Probab=81.80  E-value=0.56  Score=35.02  Aligned_cols=51  Identities=12%  Similarity=0.123  Sum_probs=40.1

Q ss_pred             hHHHHHHHhCCCCCccccccccCCCcccCccc----ccccHHHHHHHHHhhhhhc
Q 032367           82 IMPHILNLYGSCATSHDFEIYAPHASFEDPLM----CAHGVKQIKSAFYAISKVG  132 (142)
Q Consensus        82 Il~~IleLYsc~PT~edFeiYApdAtFEDPl~----~A~Gv~qIksQFYgLPKvF  132 (142)
                      +|+...+.++..-...-.++|+||++|++|-+    ...|+..|+..|-.+...|
T Consensus        15 ~v~ry~~A~n~gD~d~l~~l~aeD~v~~~p~~~p~~~~~Greai~~~f~~~~~~~   69 (156)
T 3g16_A           15 VIRTYYDGCNEADEAKMIACFVPEAVHYFPAGMYGGAFRGAAQIAHRWRTAVETL   69 (156)
T ss_dssp             HHHHHHHHHHTTCHHHHHTTEEEEEEEECBTTSTTSCEESHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCHHHHHHhcCCCEEEecCCCCCCCCccCHHHHHHHHHHHHhhc
Confidence            55556666766666667788999999998874    3489999999999888776

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	142
d3dxoa1	117	Uncharacterized protein Atu0744 {Agrobacterium tum	96.1
d1oh0a_	125	Delta-5-3-ketosteroid isomerase, steroid delta-iso	95.96
d1z1sa1	129	Uncharacterized protein PA3332 {Pseudomonas aerugi	95.79
d1ohpa1	125	Delta-5-3-ketosteroid isomerase, steroid delta-iso	95.59
d1s5aa_	139	Hypothetical protein YesE {Bacillus subtilis [TaxI	95.5
d2a15a1	132	Hypothetical protein Rv0760c {Mycobacterium tuberc	95.17
d2gexa1	138	Nogalamycin biosynthesis protein SnoL {Streptomyce	94.0
d1nwwa_	145	Limonene-1,2-epoxide hydrolase {Rhodococcus erythr	93.99
d2geya1	144	Putative hydroxylase AclR {Streptomyces galilaeus	92.59
d3en8a1	127	Uncharacterized protein BxeB2092 {Burkholderia xen	91.33
d3ebta1	131	Uncharacterized protein BPSS0132 {Burkholderia pse	89.48
d1m98a2	142	Orange carotenoid protein, C-terminal domain {Cyan	88.98
d3dm8a1	135	Uncharacterized protein Rpa4348 {Rhodopseudomonas	86.24
d2bnga1	132	Uncharacterized protein Mb2760 {Mycobacterium tube	86.21
d1sjwa_	142	Nogalonic acid methyl ester cyclase SnoaL {Strepto	85.51
d2rgqa1	133	Uncharacterized protein NpunR3134 {Nostoc punctifo	83.85
d3d9ra1	132	Uncharacterized protein ECA1476 {Pectobacterium at	81.72
d3dmca1	133	Uncharacterized protein Ava2261 {Anabaena variabil	80.54

>d3dxoa1 d.17.4.19 (A:1-117) Uncharacterized protein Atu0744 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Atu0744-like
domain: Uncharacterized protein Atu0744
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.10  E-value=0.00091  Score=43.53  Aligned_cols=57  Identities=18%  Similarity=0.165  Sum_probs=44.8

Q ss_pred             chHHHHHHHhCCCCCcc----ccccccCCCcccCcccccccHHHHHHHHHhhhhhcccccc
Q 032367           81 DIMPHILNLYGSCATSH----DFEIYAPHASFEDPLMCAHGVKQIKSAFYAISKVGQEASQ  137 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~e----dFeiYApdAtFEDPl~~A~Gv~qIksQFYgLPKvFseSei  137 (142)
                      .|++.-+++++..-..+    --++|++|++|+||++-..|+..|+.-|-++-+-|+..+.
T Consensus         6 ~~~~~y~~awn~~d~~~~~~~l~~~~a~d~~~~dP~~~~~G~~ai~~~~~~~~~~~~~~~~   66 (117)
T d3dxoa1           6 TIAQTYLAAWNEEDNERRRHLVGQAWAENTRYVDPLMQGEGQQGIAAMIEAARQKFPGYRF   66 (117)
T ss_dssp             HHHHHHHHHHHCSCHHHHHHHHHHHEEEEEEEECSSCEEEHHHHHHHHHHHHHHHSTTCEE
T ss_pred             HHHHHHHHHHhccCchhhHHHHHHHccCCEEEECCCCCcccHHHHHHHHHHHHHhCCCcEE
Confidence            46677777777654333    3457999999999999999999999999988887776543

>d1oh0a_ d.17.4.3 (A:) Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Ketosteroid isomerase-like
domain: Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI
species: Pseudomonas putida [TaxId: 303]

Probab=95.96  E-value=0.0008  Score=43.09  Aligned_cols=55  Identities=24%  Similarity=0.303  Sum_probs=44.8

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCcccc--cccHHHHHHHHHhhhhhcccc
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPLMC--AHGVKQIKSAFYAISKVGQEA  135 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~~--A~Gv~qIksQFYgLPKvFseS  135 (142)
                      .+++.-.+.|+.+--..-.++|+|||+|+||.+-  .+|+.+|+.-|-.+.+.++..
T Consensus         9 ~~v~~y~~a~~~~D~d~~~~l~~~d~~~~~p~~~~~~~G~~~i~~~~~~~~~~~~~~   65 (125)
T d1oh0a_           9 GLMARYIELVDVGDIEAIVQMYADDATVEDPFGQPPIHGREQIAAFYRQGLGGGKVR   65 (125)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHEEEEEEEESSTTSCCEEHHHHHHHHHHHHHSSSCCE
T ss_pred             HHHHHHHHHHHcCCHHHHHHHhCCCEEEECCCCCcccccHHHHHHHHHHHHHhcccc
Confidence            4677777777777777778899999999999864  789999999998887766543

>d1z1sa1 d.17.4.10 (A:1-129) Uncharacterized protein PA3332 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: PhzA/PhzB-like
domain: Uncharacterized protein PA3332
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.79  E-value=0.0011  Score=42.11  Aligned_cols=55  Identities=16%  Similarity=0.197  Sum_probs=46.9

Q ss_pred             hchHHHHHHHhCCCCCccccccccCCCcccCccc------ccccHHHHHHHHHhhhhhccc
Q 032367           80 DDIMPHILNLYGSCATSHDFEIYAPHASFEDPLM------CAHGVKQIKSAFYAISKVGQE  134 (142)
Q Consensus        80 ~~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~------~A~Gv~qIksQFYgLPKvFse  134 (142)
                      ..|+.+..+.+..+-...-.++|++|++|++|.+      ...|+.+|++-|-.+...|+.
T Consensus         4 ~eiv~~~~~~~~~gD~~~~~~l~a~D~v~~~p~~~~~~~~~~~G~~~i~~~~~~~~~~~~~   64 (129)
T d1z1sa1           4 KEILVHSLRLLENGDARGWCDLFHPEGVLEFPYAPPGWKTRFEGRETIWAHMRLFPEHLTV   64 (129)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHTEEEEEEEECSSCCTTSCCEEESHHHHHHTTTTGGGTEEE
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHhcCceEEEEecCCcccceEEeCHHHHHHHHHhhhhcccc
Confidence            4588999999999999999999999999999964      469999999987777776653

>d1ohpa1 d.17.4.3 (A:1-125) Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI {Comamonas testosteroni, also known as Pseudomonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Ketosteroid isomerase-like
domain: Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI
species: Comamonas testosteroni, also known as Pseudomonas testosteroni [TaxId: 285]

Probab=95.59  E-value=0.0018  Score=40.65  Aligned_cols=58  Identities=12%  Similarity=0.188  Sum_probs=48.4

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCcccc--cccHHHHHHHHHhhhhhccccccC
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPLMC--AHGVKQIKSAFYAISKVGQEASQE  138 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~~--A~Gv~qIksQFYgLPKvFseSei~  138 (142)
                      .+++...+.|+..--..-.++|++|++|.||.+.  ..|...|+.-|-++...+...++.
T Consensus         9 ~~v~~~~~a~~~~D~~~~~~l~a~D~~~~~p~~~~~~~G~~~i~~~~~~~~~~~~~~~~~   68 (125)
T d1ohpa1           9 AVVQRYVAALNAGDLDGIVALFADDATVENPVGSEPRSGTAAIREFYANSLKLPLAVELT   68 (125)
T ss_dssp             HHHHHHHHHHHHTCHHHHHTTEEEEEEEESSTTSCCEESHHHHHHHHHHHTSSCCEEEEC
T ss_pred             HHHHHHHHHHHcCCHHHHHHHhCCceEEecCccCcccccHHHHHHHHHHHhhcCCceEEE
Confidence            3677777778877778888899999999999865  799999999999998888765554

>d1s5aa_ d.17.4.10 (A:) Hypothetical protein YesE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: PhzA/PhzB-like
domain: Hypothetical protein YesE
species: Bacillus subtilis [TaxId: 1423]

Probab=95.50  E-value=0.0018  Score=41.89  Aligned_cols=58  Identities=16%  Similarity=0.084  Sum_probs=47.6

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCccc------ccccHHHHHHHHHhhhhhccccccC
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPLM------CAHGVKQIKSAFYAISKVGQEASQE  138 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~------~A~Gv~qIksQFYgLPKvFseSei~  138 (142)
                      .+++.+.+.+..+--..-.++|++||+|++|.+      ..+|+.+|+..|-.+...|+..+..
T Consensus         9 e~v~~~~~a~~~~D~~~~~~l~~eD~v~~~p~~~~~~~~~~~G~~~i~~~~~~~~~~~~~~~~~   72 (139)
T d1s5aa_           9 ETLRKFMAYMLEKDMKSWTELWDENAVFEFPYAPEGSPKRIEGKAAIYDYIKDYPKQIHLSSFT   72 (139)
T ss_dssp             HHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTCCTTSCSEEESHHHHHHHHTTHHHHEEEEEEC
T ss_pred             HHHHHHHHHHHcCCHHHHHHHhCCceEEEEccCCccccceecchHHHHHhhhhchhhcccceee
Confidence            477778888888888888899999999999875      4689999999998888888765444

>d2a15a1 d.17.4.3 (A:5-136) Hypothetical protein Rv0760c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Ketosteroid isomerase-like
domain: Hypothetical protein Rv0760c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.17  E-value=0.0039  Score=39.52  Aligned_cols=52  Identities=12%  Similarity=0.102  Sum_probs=41.6

Q ss_pred             hHHHHHHHhCCCCCccccccccCCCcccCcc---------cccccHHHHHHHHHhhhhhcc
Q 032367           82 IMPHILNLYGSCATSHDFEIYAPHASFEDPL---------MCAHGVKQIKSAFYAISKVGQ  133 (142)
Q Consensus        82 Il~~IleLYsc~PT~edFeiYApdAtFEDPl---------~~A~Gv~qIksQFYgLPKvFs  133 (142)
                      .+++..+.++..-...-.++|+|||+|+||.         +..+|...|+.-|-.+...+.
T Consensus         8 ~~~~~~~a~~~~D~~~~~~l~a~D~~~~~P~~~~~~~~~~~~~~G~~ai~~~~~~~~~~~~   68 (132)
T d2a15a1           8 ASQSSWRCVQAHDREGWLALMADDVVIEDPIGKSVTNPDGSGIKGKEAVGAFFDTHIAANR   68 (132)
T ss_dssp             HHHHHHHHHHTTCHHHHHHTEEEEEEEESSSSSBTTBTTSSCEESHHHHHHHHHHHTTTTT
T ss_pred             HHHHHHHHHHcCCHHHHHHHcCCCeEEEccCCccccCccchheehHHHHHHhhhhhhcccc
Confidence            4566667777777778889999999999997         457899999999887765543

>d2gexa1 d.17.4.9 (A:2-139) Nogalamycin biosynthesis protein SnoL {Streptomyces nogalater [TaxId: 38314]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: SnoaL-like polyketide cyclase
domain: Nogalamycin biosynthesis protein SnoL
species: Streptomyces nogalater [TaxId: 38314]

Probab=94.00  E-value=0.0099  Score=38.75  Aligned_cols=56  Identities=7%  Similarity=0.003  Sum_probs=46.8

Q ss_pred             hHHHHHHHhCCCCCccccccccCCCcccCcccccccHHHHHHHHHhhhhhcccccc
Q 032367           82 IMPHILNLYGSCATSHDFEIYAPHASFEDPLMCAHGVKQIKSAFYAISKVGQEASQ  137 (142)
Q Consensus        82 Il~~IleLYsc~PT~edFeiYApdAtFEDPl~~A~Gv~qIksQFYgLPKvFseSei  137 (142)
                      ++..+.+.|+..--..-.++|+||++|++|.+.-.|+.++++-|..+-+.|++-+.
T Consensus         8 ~~~~~~~a~~~~D~~~~~~~~a~D~~~~~~~~~~~G~~~~~~~~~~~~~~~~d~~~   63 (138)
T d2gexa1           8 RCLEMVAAWNRWDVSGVVAHWAPDVVHYDDEDKPVSAEEVVRRMNSAVEAFPDLRL   63 (138)
T ss_dssp             HHHHHHHHHHTTCHHHHHTTEEEEEEEECTTSCEECHHHHHHHHHHHHHHCTTCEE
T ss_pred             HHHHHHHHHHccCHHHHHHHhCccccccCCCCCccCHHHHHHHHHHHHHhccCcee
Confidence            55666677777777777788999999999999999999999999998888876554

>d1nwwa_ d.17.4.8 (A:) Limonene-1,2-epoxide hydrolase {Rhodococcus erythropolis [TaxId: 1833]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Limonene-1,2-epoxide hydrolase-like
domain: Limonene-1,2-epoxide hydrolase
species: Rhodococcus erythropolis [TaxId: 1833]

Probab=93.99  E-value=0.009  Score=39.66  Aligned_cols=57  Identities=16%  Similarity=0.255  Sum_probs=47.8

Q ss_pred             hchHHHHHHHhCCCCCccccccccCCCcccC-cccccccHHHHHHHHHhhhhhccccc
Q 032367           80 DDIMPHILNLYGSCATSHDFEIYAPHASFED-PLMCAHGVKQIKSAFYAISKVGQEAS  136 (142)
Q Consensus        80 ~~Il~~IleLYsc~PT~edFeiYApdAtFED-Pl~~A~Gv~qIksQFYgLPKvFseSe  136 (142)
                      +.|+....+-++.+--..-.++|+||++|+| |.+...|..+|++.|-++-..|.+..
T Consensus        21 ~~lv~~~~~A~~~~D~~~~~~~~~~D~~~~~~~~~~~~G~e~~~~~~~~~~~~~~~~~   78 (145)
T d1nwwa_          21 EKIVLEFMDALTSNDAAKLIEYFAEDTMYQNMPLPPAYGRDAVEQTLAGLFTVMSIDA   78 (145)
T ss_dssp             HHHHHHHHHHGGGCCHHHHHTTBCSSCEEEETTSCCEESHHHHHHHHHHHHHHEEEEE
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHHhccceEecCCcccccCHHHHHHHHHhhhhhccccc
Confidence            4588888888888888888889999999998 56678899999999998877776544

>d2geya1 d.17.4.9 (A:2-145) Putative hydroxylase AclR {Streptomyces galilaeus [TaxId: 33899]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: SnoaL-like polyketide cyclase
domain: Putative hydroxylase AclR
species: Streptomyces galilaeus [TaxId: 33899]

Probab=92.59  E-value=0.025  Score=37.39  Aligned_cols=56  Identities=5%  Similarity=-0.037  Sum_probs=48.0

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCcccccccHHHHHHHHHhhhhhcccccc
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPLMCAHGVKQIKSAFYAISKVGQEASQ  137 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~~A~Gv~qIksQFYgLPKvFseSei  137 (142)
                      .|+..+.+.|+.+--..--++|+||.+|+|| +...|..++++.|-++-+.|++.+.
T Consensus         7 ~l~~~~~~A~n~~D~~~~~~~~a~d~v~~~~-~~~~G~~~~~~~~~~~~~~~pd~~~   62 (144)
T d2geya1           7 ALCLEMVAAWNRWDLSGIIKHWSPDIVHYSE-DNEVSSADMVKLMEGGLKAFPDLQL   62 (144)
T ss_dssp             HHHHHHHHHHHTTCTHHHHTTEEEEEEEEET-TEEECHHHHHHHHHHHHHHSTTCEE
T ss_pred             HHHHHHHHHHHcCCHHHHHHHhCcccccccC-CcccCHHHHHHHHHHHHHhcccccc
Confidence            4778888889988888888899999999999 6667999999999999888876543

>d3en8a1 d.17.4.20 (A:1-127) Uncharacterized protein BxeB2092 {Burkholderia xenovorans [TaxId: 36873]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Rpa4348-like
domain: Uncharacterized protein BxeB2092
species: Burkholderia xenovorans [TaxId: 36873]

Probab=91.33  E-value=0.02  Score=37.61  Aligned_cols=51  Identities=10%  Similarity=0.055  Sum_probs=40.7

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCccc--ccccHHHHHHHHHhhhhh
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPLM--CAHGVKQIKSAFYAISKV  131 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~--~A~Gv~qIksQFYgLPKv  131 (142)
                      .+++...+.++..--..-.++|++|++|++|.+  ...|+..|+.-|-.+|..
T Consensus         8 ~~v~~~~~A~~~gD~da~~~l~adD~v~~~p~~~~~~~G~e~i~~~~~~~~~~   60 (127)
T d3en8a1           8 EALNAHWQASAAGDFDAEHDIYDDDAICDYPQSGERILGRMNLQALRSHHPGK   60 (127)
T ss_dssp             HHHHHHHHHHHHTCHHHHTTTEEEEEEEEETTTTEEEESHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHHHcCCHHHHHHHhcCCEEEEcCCcccccchHHHHHHHHHHHhcc
Confidence            366777777777777778889999999999975  578999999877666654

>d3ebta1 d.17.4.9 (A:1-131) Uncharacterized protein BPSS0132 {Burkholderia pseudomallei [TaxId: 28450]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: SnoaL-like polyketide cyclase
domain: Uncharacterized protein BPSS0132
species: Burkholderia pseudomallei [TaxId: 28450]

Probab=89.48  E-value=0.043  Score=34.60  Aligned_cols=56  Identities=11%  Similarity=0.123  Sum_probs=45.6

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCccc--------ccccHHHHHHHHHhhhhhccccc
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPLM--------CAHGVKQIKSAFYAISKVGQEAS  136 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~--------~A~Gv~qIksQFYgLPKvFseSe  136 (142)
                      .|++.+.+.|+..--..-+++|+||.+|.+|-+        ...|...+++.|-.+...++...
T Consensus         6 ~~v~~~~~a~~~~D~~~~~~~~a~D~~~~~~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~   69 (131)
T d3ebta1           6 QTVRESYEAFHRRDLPGVLAALAPDVRWTHPDGMSPYGLGGTKHGHDEVIAFIRHVPTHIAEMR   69 (131)
T ss_dssp             HHHHHHHHHHHTTCHHHHHTTEEEEEEEEECGGGGGGTCCEEEEHHHHHHHHHHHGGGTEEEEE
T ss_pred             HHHHHHHHHHHcCCHHHHHHHhCcceEEEEcCCCcccCccccccchHHHHHhhhhhccccCcce
Confidence            478888888888777778899999999998753        56899999999988877766543

>d1m98a2 d.17.4.6 (A:176-317) Orange carotenoid protein, C-terminal domain {Cyanobacteria (Arthrospira maxima) [TaxId: 129910]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Orange carotenoid protein, C-terminal domain
domain: Orange carotenoid protein, C-terminal domain
species: Cyanobacteria (Arthrospira maxima) [TaxId: 129910]

Probab=88.98  E-value=0.075  Score=37.89  Aligned_cols=53  Identities=8%  Similarity=0.179  Sum_probs=40.8

Q ss_pred             chhchHHHHHHHhCCCCCccccccccCCCcccCcccc-cccHHHHHHHHHhhhh
Q 032367           78 ISDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLMC-AHGVKQIKSAFYAISK  130 (142)
Q Consensus        78 ~~~~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~~-A~Gv~qIksQFYgLPK  130 (142)
                      +.+..|..-.+-++..-...-.++||+||+|+||+.. ..|+..|++=|=...+
T Consensus        20 i~~~~V~~Y~~a~na~D~d~~~~lFa~Dav~~~P~~~p~~G~eaI~~f~~~~~~   73 (142)
T d1m98a2          20 VTNSTVLQYMDNLNANDFDNLISLFAEDGALQPPFQKPIVGKENTLRFFREECQ   73 (142)
T ss_dssp             BCCHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTSCCEESHHHHHHHHHHHCT
T ss_pred             ccHHHHHHHHHHHhcCCHHHHHHHcCCCeEEeCCCCccccCHHHHHHHHHHhcc
Confidence            4444677777778888788888899999999999875 5799999885544333

>d3dm8a1 d.17.4.20 (A:1-135) Uncharacterized protein Rpa4348 {Rhodopseudomonas palustris [TaxId: 1076]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Rpa4348-like
domain: Uncharacterized protein Rpa4348
species: Rhodopseudomonas palustris [TaxId: 1076]

Probab=86.24  E-value=0.1  Score=33.58  Aligned_cols=57  Identities=7%  Similarity=-0.070  Sum_probs=46.6

Q ss_pred             hchHHHHHHHhCCCCCccccccccCCCcccCc--------ccccccHHHHHHHHHhhhhhccccc
Q 032367           80 DDIMPHILNLYGSCATSHDFEIYAPHASFEDP--------LMCAHGVKQIKSAFYAISKVGQEAS  136 (142)
Q Consensus        80 ~~Il~~IleLYsc~PT~edFeiYApdAtFEDP--------l~~A~Gv~qIksQFYgLPKvFseSe  136 (142)
                      .+|++.+-+-++.+-...-.++++||++|..|        .+..+|..+|++-|=.+...++.-+
T Consensus         7 ~~~~~~~y~A~~~~d~d~~~~l~~~D~~~~~~g~~~~~P~~G~~~G~~~~~~~~~~~~~~~~~~~   71 (135)
T d3dm8a1           7 WRFSRALHRALNDRQTEELATIIDDNIDWAIYGPIDMFPFFGARQGKAAVLEVCRQIADSVRIYR   71 (135)
T ss_dssp             HHHHHHHHHHHHHCCCHHHHHHEEEEEEEEEESCTTTCTTCEEEESHHHHHHHHHHHHHHEEEEE
T ss_pred             HHHHHHHHHHHhcCCHHHHHHhcCcceEEEccccccccccccccccchhhhhhhhhcccccccee
Confidence            45778888888888888889999999999875        3678999999998888887776543

>d2bnga1 d.17.4.8 (A:13-144) Uncharacterized protein Mb2760 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Limonene-1,2-epoxide hydrolase-like
domain: Uncharacterized protein Mb2760
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=86.21  E-value=0.075  Score=34.44  Aligned_cols=52  Identities=8%  Similarity=0.010  Sum_probs=41.6

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCc-ccccccHHHHHHHHHhhhhhc
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDP-LMCAHGVKQIKSAFYAISKVG  132 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDP-l~~A~Gv~qIksQFYgLPKvF  132 (142)
                      .+++...+.++..--..-.++|++|++|+|| ..-..|...|+.-|-.+...|
T Consensus         7 ~~V~~f~~A~~~~D~d~~~~~~a~D~v~~~~~~~~~~G~~~~~~~~~~~~~~~   59 (132)
T d2bnga1           7 RAVEAFLNALQNEDFDTVDAALGDDLVYENVGFSRIRGGRRTATLLRRMQGRV   59 (132)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHEEEEEEEEETTTEEEECHHHHHHHHHTTTTTC
T ss_pred             HHHHHHHHHHHccCHHHHHHHhccchheeccccCCcchHHHHHHHHHhccccc
Confidence            4778888888887777788889999999995 668899999998776655444

>d1sjwa_ d.17.4.9 (A:) Nogalonic acid methyl ester cyclase SnoaL {Streptomyces nogalater [TaxId: 38314]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: SnoaL-like polyketide cyclase
domain: Nogalonic acid methyl ester cyclase SnoaL
species: Streptomyces nogalater [TaxId: 38314]

Probab=85.51  E-value=0.24  Score=31.60  Aligned_cols=54  Identities=15%  Similarity=0.082  Sum_probs=40.8

Q ss_pred             chHHHHHHHhCCCCCccccccccCCCcccCcc--cccccHHHHHHHHHhhhhhccc
Q 032367           81 DIMPHILNLYGSCATSHDFEIYAPHASFEDPL--MCAHGVKQIKSAFYAISKVGQE  134 (142)
Q Consensus        81 ~Il~~IleLYsc~PT~edFeiYApdAtFEDPl--~~A~Gv~qIksQFYgLPKvFse  134 (142)
                      .|++...+.++..--..--++|+||.++++|.  +...|...++.-+-.+...|+.
T Consensus         5 eiv~~~~~a~~~gd~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   60 (142)
T d1sjwa_           5 EIVRRMVSAFNTGRTDDVDEYIHPDYLNPATLEHGIHTGPKAFAQLVGWVRATFSE   60 (142)
T ss_dssp             HHHHHHHHHHHHCCCTTGGGTEEEEEECGGGGGGTCCSHHHHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHcCCHHHHHHHhhhhEEEeccccccccchhHHHHHHHHHHHhhhcc
Confidence            47788888887666666678899999999986  5667777777766666666654

>d2rgqa1 d.17.4.25 (A:1-133) Uncharacterized protein NpunR3134 {Nostoc punctiforme [TaxId: 272131]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Rv3472-like
domain: Uncharacterized protein NpunR3134
species: Nostoc punctiforme [TaxId: 272131]

Probab=83.85  E-value=0.14  Score=33.39  Aligned_cols=30  Identities=20%  Similarity=0.430  Sum_probs=26.3

Q ss_pred             ccccCCCcccCcccccccHHHHHHHHHhhh
Q 032367          100 EIYAPHASFEDPLMCAHGVKQIKSAFYAIS  129 (142)
Q Consensus       100 eiYApdAtFEDPl~~A~Gv~qIksQFYgLP  129 (142)
                      +.|++||+|+.|.+.+.|+..|++.|-+.-
T Consensus        32 ~~FteDa~~~~~~~~~~G~~~i~~~~~~~~   61 (133)
T d2rgqa1          32 ATFASDGALQGFWGIAKGKEELRQGFYAML   61 (133)
T ss_dssp             TTEEEEEEEEETTEEEESHHHHHHHHHHHH
T ss_pred             hhccCCcEEEcCCcccCCHHHHHHHHHHHh
Confidence            458999999999999999999999886543

>d3d9ra1 d.17.4.27 (A:3-134) Uncharacterized protein ECA1476 {Pectobacterium atrosepticum [TaxId: 29471]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: ECA1476-like
domain: Uncharacterized protein ECA1476
species: Pectobacterium atrosepticum [TaxId: 29471]

Probab=81.72  E-value=0.29  Score=30.45  Aligned_cols=51  Identities=10%  Similarity=0.158  Sum_probs=35.5

Q ss_pred             HHHHHHHhCCCCCccccccccCCCcccCccc-ccccHHHHHHHHHhhhhhcc
Q 032367           83 MPHILNLYGSCATSHDFEIYAPHASFEDPLM-CAHGVKQIKSAFYAISKVGQ  133 (142)
Q Consensus        83 l~~IleLYsc~PT~edFeiYApdAtFEDPl~-~A~Gv~qIksQFYgLPKvFs  133 (142)
                      +..-.+-+...--..-.++|++||+|..|-+ ...|+.+|++.|-++-..+.
T Consensus        14 ~~~y~~A~~~~D~~~~~~l~t~Dav~~~~~~~~~~G~~~i~~~~~~~~~~~~   65 (132)
T d3d9ra1          14 AIAYLTAFNRADIPAVIATYTDDGVLMGPGRPAAVGKDELAEVYLSVFETVG   65 (132)
T ss_dssp             HHHHHHHHHTTCHHHHHHTEEEEEEEECTTSCCEESHHHHHHHHHHHHHHEE
T ss_pred             HHHHHHHHHcCCHHHHHHhcCCCeEEEccCCcceehHHHHHHHHHHHhhcCC
Confidence            3333444455555556678999999987655 57899999999988655443

>d3dmca1 d.17.4.10 (A:1-133) Uncharacterized protein Ava2261 {Anabaena variabilis [TaxId: 1172]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: PhzA/PhzB-like
domain: Uncharacterized protein Ava2261
species: Anabaena variabilis [TaxId: 1172]

Probab=80.54  E-value=0.16  Score=33.00  Aligned_cols=59  Identities=10%  Similarity=0.069  Sum_probs=45.0

Q ss_pred             ccchhchHHHHHHHhCCCCCccccccccCCCcccCccc----ccccHHHHHHHHHhhhhhccc
Q 032367           76 KRISDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLM----CAHGVKQIKSAFYAISKVGQE  134 (142)
Q Consensus        76 ~~~~~~Il~~IleLYsc~PT~edFeiYApdAtFEDPl~----~A~Gv~qIksQFYgLPKvFse  134 (142)
                      ..+++..++++.+..+..-...-++++++|++|+-|..    ...|+..++.-|-.+...|..
T Consensus        10 ~~~a~~~~e~f~~a~~~gD~d~~~~l~~~D~~~~~p~~~~~g~~~G~~~v~~~~~~~~~~~~~   72 (133)
T d3dmca1          10 LKVAHQGFEFFTQGLATGEWQKFLDMLTEDFTFWFPMGEFHGLNVGKERAKEFFTYVSESFHT   72 (133)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCHHHHTTEEEEEEEEESSGGGBEEEESHHHHHHHHHHHHHTCTT
T ss_pred             HHHHHHHHHHHHHHHHcCCHHHHHHHhccceEEEecCCCcccchhhHHHHHHHhhhccccccc
Confidence            44566677777777788888888999999999997753    457888888777677766653