Citrus Sinensis ID: 032373

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140--
Protein Sequence
MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWIKLYSHMLKQRGSKLGKRQEKKKK
Secondary Structure (PSIPRED)
cccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccccccHHHHHHHHHHHHHccHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHEEEEEEEcccccHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHEHHHHcHHHHHHHHHHHHHHcHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHcccc
Coil and Loop (DISEMBL)
MQWCGRTLFFLVTAREIvqvqdhpsLFITFLAWCLIEVIrypfyalntigacppwltylrytmfiplypiGVLGEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWIKLYSHMLKQRGsklgkrqekkkk
Flexible Loop (DISEMBL)
MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWIKLYSHMLKQrgsklgkrqekkkk
Low Complexity Region (SEG)
MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWIKLYSHMLKQRGSKLGKRQEKKKK
Disordered region (IsUnstruct)
**WCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWIKLYSHML****************
Disordered Region (DISOPRED)
MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWIKLYSHML****************
Disordered Region (DISEMBL)
MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWIKLYSHMLK***************
Disordered Region (DISPRO)
MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWIKLYSHMLKQRGSKLG********
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWIKLYSHMLKQRGSKLGKRQEKKKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	142	2.2.26 [Sep-21-2011]
Q2KIP8	254	Very-long-chain (3R)-3-hy	yes	no	0.964	0.539	0.317	6e-17
Q5RBK3	255	Very-long-chain (3R)-3-hy	yes	no	0.957	0.533	0.319	8e-17
Q6Y1H2	254	Very-long-chain (3R)-3-hy	yes	no	0.957	0.535	0.319	8e-17
Q9D3B1	254	Very-long-chain (3R)-3-hy	yes	no	0.957	0.535	0.312	2e-16
Q9QY80	281	Very-long-chain (3R)-3-hy	no	no	0.901	0.455	0.315	1e-14
Q8K2C9	362	Very-long-chain (3R)-3-hy	no	no	0.950	0.372	0.328	1e-14
Q4W1W1	249	Very-long-chain (3R)-3-hy	no	no	0.901	0.514	0.323	2e-14
Q9N1R5	288	Very-long-chain (3R)-3-hy	N/A	no	0.901	0.444	0.323	3e-14
B0YJ81	288	Very-long-chain (3R)-3-hy	no	no	0.901	0.444	0.315	1e-13
Q7SY06	359	Very-long-chain (3R)-3-hy	no	no	0.654	0.259	0.376	2e-12

>sp|Q2KIP8|HACD2_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 2 OS=Bos taurus GN=PTPLB PE=2 SV=2

 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 11/148 (7%)

Query: 1   MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
           +Q   R          + +VQ   S+ +  +AW + E+IRY FY  + +   P  + + R
Sbjct: 109 IQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYLIKWAR 168

Query: 61  YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFA-------NFFAILPFSYYNVVQVIFVM 113
           YT+FI LYP+GV GE+L +Y A P++++  +++       NF     F YY  + +I + 
Sbjct: 169 YTLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNF----SFDYYAFLILIMIS 224

Query: 114 YPFAWIKLYSHMLKQRGSKLGKRQEKKK 141
           Y   + +LY HM+ QR   L   +E KK
Sbjct: 225 YIPLFPQLYFHMIHQRRKILSHTEEHKK 252

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.
Bos taurus (taxid: 9913)
EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: -

>sp|Q5RBK3|HACD2_PONAB Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 2 OS=Pongo abelii GN=PTPLB PE=2 SV=1

 Score = 85.9 bits (211), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 11/147 (7%)

Query: 2   QWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRY 61
           Q   R          + +VQ   S+ +  +AW + E+IRY FY  + +   P  + + RY
Sbjct: 111 QVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYLIKWARY 170

Query: 62  TMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFA-------NFFAILPFSYYNVVQVIFVMY 114
           T+FI LYP+GV GE+L +Y A P++++  +++       NF     F YY  + +I + Y
Sbjct: 171 TLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNF----SFDYYAFLILIMISY 226

Query: 115 PFAWIKLYSHMLKQRGSKLGKRQEKKK 141
              + +LY HM+ QR   L   +E KK
Sbjct: 227 IPIFPQLYFHMIHQRRKILSHTEEHKK 253

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.

Pongo abelii (taxid: 9601)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q6Y1H2|HACD2_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 2 OS=Homo sapiens GN=PTPLB PE=1 SV=1

 Score = 85.9 bits (211), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 11/147 (7%)

Query: 2   QWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRY 61
           Q   R          + +VQ   S+ +  +AW + E+IRY FY  + +   P  + + RY
Sbjct: 110 QVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYLIKWARY 169

Query: 62  TMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFA-------NFFAILPFSYYNVVQVIFVMY 114
           T+FI LYP+GV GE+L +Y A P++++  +++       NF     F YY  + +I + Y
Sbjct: 170 TLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNF----SFDYYAFLILIMISY 225

Query: 115 PFAWIKLYSHMLKQRGSKLGKRQEKKK 141
              + +LY HM+ QR   L   +E KK
Sbjct: 226 IPIFPQLYFHMIHQRRKILSHTEEHKK 252

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q9D3B1|HACD2_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 2 OS=Mus musculus GN=Ptplb PE=2 SV=1

 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 11/147 (7%)

Query: 2   QWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRY 61
           Q   R          + +VQ   S+ +  +AW + E+IRY FY  + +   P  + + RY
Sbjct: 110 QVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYIIKWARY 169

Query: 62  TMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFA-------NFFAILPFSYYNVVQVIFVMY 114
           T+FI LYP+GV GE+L +Y A P++++  +++       NF     F Y+  + +I + Y
Sbjct: 170 TLFIVLYPMGVTGELLTIYAALPFVRQAGLYSISLPNKYNF----SFDYHAFLILIMISY 225

Query: 115 PFAWIKLYSHMLKQRGSKLGKRQEKKK 141
              + +LY HM+ QR   L   +E KK
Sbjct: 226 IPLFPQLYFHMIHQRRKVLSHTEEHKK 252

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q9QY80|HACD1_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 1 OS=Mus musculus GN=Ptpla PE=2 SV=1

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 5/133 (3%)

Query: 1   MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
           +Q   R     +    I  +Q+  S+ +  ++W + E+ RY FY  + +   P ++ + R
Sbjct: 136 VQVSSRIFMVWLITHSIKPIQNEESVVLFLVSWTVTEITRYSFYTFSLLDHLPHFIKWAR 195

Query: 61  YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFA----NFFAILPFSYYNVVQVIFVMYPF 116
           Y +FI LYP+GV GE+L +Y A PY+K+  +F+    N + +  F YY  + +    Y  
Sbjct: 196 YNLFIILYPVGVAGELLTIYAALPYVKKSGMFSVRLPNKYNV-SFDYYYFLLITMASYIP 254

Query: 117 AWIKLYSHMLKQR 129
            + +LY HML+QR
Sbjct: 255 LFPQLYFHMLRQR 267

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q8K2C9|HACD3_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 3 OS=Mus musculus GN=ptplad1 PE=1 SV=2

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 11/146 (7%)

Query: 1   MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
           +Q+ GR     +    + ++Q+   +F  F +W  IE+ RYPFY L+ I      LT+LR
Sbjct: 219 IQFLGRNFILFLVFGTMEEMQNKAVVFFVFYSWSAIEIFRYPFYMLSCIDMDWKVLTWLR 278

Query: 61  YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFANFFAI-------LPFSYYNVVQVIFVM 113
           YTM+IPLYP+G L E + + Q+ P   E   F+  F +       + FS++  +QV  VM
Sbjct: 279 YTMWIPLYPLGCLSEAVAVIQSIPVFNESGRFS--FTLPYPVKMKVRFSFF--LQVYLVM 334

Query: 114 YPFAWIKLYSHMLKQRGSKLGKRQEK 139
                   + H+ KQR  + G++++K
Sbjct: 335 LFLGLYINFRHLYKQRRRRYGQKKKK 360

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis. Involved in Rac1-signaling pathways leading to the modulation of gene expression.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q4W1W1|HACD1_CANFA Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 1 OS=Canis familiaris GN=PTPLA PE=2 SV=1

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 5/133 (3%)

Query: 1   MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
           +Q   R     +    I  +Q+  S+ +  +AW + E+ RY FY  + +   P ++ + R
Sbjct: 104 VQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFIKWAR 163

Query: 61  YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFA----NFFAILPFSYYNVVQVIFVMYPF 116
           Y  FI LYP+GV+GE+L +Y A PY+K+  +F+    N + +  F YY  + +    Y  
Sbjct: 164 YNFFIILYPVGVVGELLTIYAALPYVKKTGMFSIRLPNKYNV-SFDYYYFLLITMASYIP 222

Query: 117 AWIKLYSHMLKQR 129
            + +LY HML+QR
Sbjct: 223 LFPQLYFHMLRQR 235

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.

Canis familiaris (taxid: 9615)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q9N1R5|HACD1_SHEEP Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 1 OS=Ovis aries GN=PTPLA PE=2 SV=1

 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 5/133 (3%)

Query: 1   MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
           +Q   R     +    I  +Q+  S+ +  +AW + E+ RY FY  + +   P ++ + R
Sbjct: 143 VQVSSRIFMVWLVTHSIKPIQNEESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFIKWAR 202

Query: 61  YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFA----NFFAILPFSYYNVVQVIFVMYPF 116
           Y  FI LYP+GV GE+L +Y A PY+K+  +F+    N + +  F YY  + +    Y  
Sbjct: 203 YNFFIILYPVGVAGELLTIYAALPYVKKTGMFSIRLPNKYNV-SFDYYYFLLITMASYIP 261

Query: 117 AWIKLYSHMLKQR 129
            + +LY HML+QR
Sbjct: 262 LFPQLYFHMLRQR 274

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.

Ovis aries (taxid: 9940)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|B0YJ81|HACD1_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 1 OS=Homo sapiens GN=PTPLA PE=1 SV=1

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 5/133 (3%)

Query: 1   MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
           +Q   R     +    I  +Q+  S+ +  +AW + E+ RY FY  + +   P ++ + R
Sbjct: 143 VQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFIKWAR 202

Query: 61  YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFA----NFFAILPFSYYNVVQVIFVMYPF 116
           Y  FI LYP+GV GE+L +Y A P++K+  +F+    N + +  F YY  + +    Y  
Sbjct: 203 YNFFIILYPVGVAGELLTIYAALPHVKKTGMFSIRLPNKYNV-SFDYYYFLLITMASYIP 261

Query: 117 AWIKLYSHMLKQR 129
            + +LY HML+QR
Sbjct: 262 LFPQLYFHMLRQR 274

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q7SY06|HADC_DANRE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase OS=Danio rerio GN=ptplad1 PE=2 SV=2

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 51/93 (54%)

Query: 1   MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
           +Q  GR     V    +  +Q+ P +F  F  W  IE+ RYPFY L  I      LT+LR
Sbjct: 216 IQVMGRNFILFVIFGSLEDMQNKPVVFFVFYLWSTIEIFRYPFYMLACIDTEWKLLTWLR 275

Query: 61  YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFA 93
           YT+++PLYP+GVL E + + Q+ P   E  + +
Sbjct: 276 YTIWMPLYPLGVLAEAVAVIQSIPIFDETKLLS 308

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis. Involved in Rac1-signaling pathways leading to the modulation of gene expression.

Danio rerio (taxid: 7955)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	142
224054853	219	predicted protein [Populus trichocarpa]	1.0	0.648	0.594	5e-45
351725325	218	uncharacterized protein LOC100527607 [Gl	0.992	0.646	0.563	2e-40
357472425	290	Protein-tyrosine phosphatase-like member	0.992	0.486	0.556	2e-40
388506134	219	unknown [Medicago truncatula]	0.992	0.643	0.556	5e-40
115464319	219	Os05g0460800 [Oryza sativa Japonica Grou	1.0	0.648	0.552	7e-40
326510675	218	predicted protein [Hordeum vulgare subsp	0.992	0.646	0.563	8e-40
218196929	219	hypothetical protein OsI_20234 [Oryza sa	1.0	0.648	0.552	8e-40
297796925	221	hypothetical protein ARALYDRAFT_358193 [	1.0	0.642	0.521	3e-39
242090777	218	hypothetical protein SORBIDRAFT_09g02263	0.992	0.646	0.549	2e-38
226495407	218	LOC100284318 [Zea mays] gi|195641062|gb|	0.992	0.646	0.542	4e-38

>gi|224054853|ref|XP_002298376.1| predicted protein [Populus trichocarpa] gi|222845634|gb|EEE83181.1| predicted protein [Populus trichocarpa]

 Score =  185 bits (470), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 85/143 (59%), Positives = 112/143 (78%), Gaps = 1/143 (0%)

Query: 1   MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
           MQW GRT F L   R+I++VQ+ PS+FITF+AW + EVIRY  YALN +G+CP W+TYLR
Sbjct: 76  MQWGGRTHFVLAIVRQIIEVQELPSVFITFVAWSMAEVIRYSHYALNCVGSCPSWITYLR 135

Query: 61  YTMFIPLYPIGVL-GEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWI 119
           YT FI LYPIG+  GEM  +YQA P++K+KN++A+FFA  PFSYY+ ++V+ + YPF W+
Sbjct: 136 YTAFIVLYPIGLAPGEMWTMYQALPFVKKKNLYADFFAAFPFSYYDFLRVVLLCYPFLWL 195

Query: 120 KLYSHMLKQRGSKLGKRQEKKKK 142
            LY ++LKQR SKLG+ QE KKK
Sbjct: 196 NLYRYLLKQRRSKLGRHQETKKK 218

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725325|ref|NP_001238624.1| uncharacterized protein LOC100527607 [Glycine max] gi|255632745|gb|ACU16724.1| unknown [Glycine max]

 Score =  170 bits (430), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 80/142 (56%), Positives = 105/142 (73%), Gaps = 1/142 (0%)

Query: 1   MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
           MQW GRT F L   R++ ++Q+ PS+FITFLAW + EVIRY  YA   +G CP W+TYLR
Sbjct: 76  MQWGGRTHFVLAIVRKLDELQELPSVFITFLAWSMGEVIRYSHYAFGCLGNCPSWMTYLR 135

Query: 61  YTMFIPLYPIGVL-GEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWI 119
           YT FI LYP+GV  GE+  +YQA P +KEKN++A+ F+ LPFSYY+ ++V+ + YPF W 
Sbjct: 136 YTAFIVLYPLGVGPGEIWAMYQALPVIKEKNLYADSFSSLPFSYYDFLKVVLIAYPFLWF 195

Query: 120 KLYSHMLKQRGSKLGKRQEKKK 141
           KLY HM KQR +KL KR +KK+
Sbjct: 196 KLYLHMFKQRRTKLYKRHDKKR 217

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357472425|ref|XP_003606497.1| Protein-tyrosine phosphatase-like member B [Medicago truncatula] gi|355507552|gb|AES88694.1| Protein-tyrosine phosphatase-like member B [Medicago truncatula]

 Score =  170 bits (430), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 79/142 (55%), Positives = 106/142 (74%), Gaps = 1/142 (0%)

Query: 1   MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
           MQW GRT F L     I +VQ+ P +FITFLAW + E+IRY  YA + +G CP W+TY+R
Sbjct: 77  MQWGGRTHFVLAIVNGIHEVQELPPVFITFLAWSIGEIIRYSHYAFSCLGNCPSWITYIR 136

Query: 61  YTMFIPLYPIGVL-GEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWI 119
           YT FI +YP+GV  GE+ L+YQ+ P +KEKNI+A+ F+ LPFSYY+ ++V+ V+YPF W 
Sbjct: 137 YTAFIVIYPVGVFPGELWLMYQSLPIIKEKNIYADSFSSLPFSYYDFLKVVIVVYPFLWF 196

Query: 120 KLYSHMLKQRGSKLGKRQEKKK 141
           KLY H+ KQR SKL KR++KK+
Sbjct: 197 KLYLHLFKQRRSKLYKRRDKKR 218

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388506134|gb|AFK41133.1| unknown [Medicago truncatula]

 Score =  169 bits (427), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 79/142 (55%), Positives = 106/142 (74%), Gaps = 1/142 (0%)

Query: 1   MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
           MQW GRT F L     I +VQ+ P +FITFLAW + E+IRY  YA + +G CP W+TY+R
Sbjct: 77  MQWGGRTHFVLAIVNGIHEVQELPPVFITFLAWSIGEIIRYSHYAFSCLGNCPSWITYIR 136

Query: 61  YTMFIPLYPIGVL-GEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWI 119
           YT FI +YP+GV  GE+ L+YQ+ P +KEKNI+A+ F+ LPFSYY+ ++V+ V+YPF W 
Sbjct: 137 YTAFIVIYPVGVFPGELWLMYQSLPIIKEKNIYADSFSSLPFSYYDFLKVVIVVYPFLWF 196

Query: 120 KLYSHMLKQRGSKLGKRQEKKK 141
           KLY H+ KQR SKL KR++KK+
Sbjct: 197 KLYLHLFKQRRSKLYKRRDKKR 218

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115464319|ref|NP_001055759.1| Os05g0460800 [Oryza sativa Japonica Group] gi|113579310|dbj|BAF17673.1| Os05g0460800 [Oryza sativa Japonica Group] gi|222631857|gb|EEE63989.1| hypothetical protein OsJ_18818 [Oryza sativa Japonica Group]

 Score =  168 bits (425), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 79/143 (55%), Positives = 101/143 (70%), Gaps = 1/143 (0%)

Query: 1   MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
           +QW GRT F L   R+I +VQ  PS+FITF+AW + EVIRY  YAL T+  CPPWLTYLR
Sbjct: 76  LQWGGRTHFVLAVVRQIPEVQSSPSVFITFMAWSISEVIRYSHYALTTLKVCPPWLTYLR 135

Query: 61  YTMFIPLYPIGVL-GEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWI 119
           YT FIPLYPIGV  GEM  +YQA P++KE+ +++ FF     SY++ +  +  +YPF W+
Sbjct: 136 YTAFIPLYPIGVGPGEMWTMYQALPFVKERKLYSGFFGKFSMSYHSFLVAVLAVYPFLWM 195

Query: 120 KLYSHMLKQRGSKLGKRQEKKKK 142
           KLY H+ KQR SKLGK    KK+
Sbjct: 196 KLYLHVFKQRRSKLGKSGGAKKR 218

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326510675|dbj|BAJ87554.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  168 bits (425), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 80/142 (56%), Positives = 103/142 (72%), Gaps = 1/142 (0%)

Query: 1   MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
           +QW GRT F L   R+I +VQD PS+FITF+AW + EVIRY  YAL+TI  CP WLTYLR
Sbjct: 76  LQWGGRTHFVLALLRQIPEVQDSPSVFITFMAWSISEVIRYSHYALSTIKVCPAWLTYLR 135

Query: 61  YTMFIPLYPIGVL-GEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWI 119
           YT FIPLYPIGV  GEM  +YQA P++KE+++++ FFA    SY++ +  + + YP  W+
Sbjct: 136 YTAFIPLYPIGVGPGEMWTMYQALPFVKERDLYSGFFAKFSMSYHSFLVGVLLCYPLLWL 195

Query: 120 KLYSHMLKQRGSKLGKRQEKKK 141
           KLY H+ KQR SKLGK   KK+
Sbjct: 196 KLYLHVFKQRKSKLGKADRKKR 217

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218196929|gb|EEC79356.1| hypothetical protein OsI_20234 [Oryza sativa Indica Group]

 Score =  168 bits (425), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 79/143 (55%), Positives = 101/143 (70%), Gaps = 1/143 (0%)

Query: 1   MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
           +QW GRT F L   R+I +VQ  PS+FITF+AW + EVIRY  YAL T+  CPPWLTYLR
Sbjct: 76  LQWGGRTHFVLAVVRQIPEVQSSPSVFITFMAWSISEVIRYSHYALTTLKVCPPWLTYLR 135

Query: 61  YTMFIPLYPIGVL-GEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWI 119
           YT FIPLYPIGV  GEM  +YQA P++KE+ +++ FF     SY++ +  +  +YPF W+
Sbjct: 136 YTAFIPLYPIGVGPGEMWTMYQALPFVKERKLYSGFFGKFSMSYHSFLVAVLAVYPFLWM 195

Query: 120 KLYSHMLKQRGSKLGKRQEKKKK 142
           KLY H+ KQR SKLGK    KK+
Sbjct: 196 KLYLHVFKQRRSKLGKTGGAKKR 218

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796925|ref|XP_002866347.1| hypothetical protein ARALYDRAFT_358193 [Arabidopsis lyrata subsp. lyrata] gi|297312182|gb|EFH42606.1| hypothetical protein ARALYDRAFT_358193 [Arabidopsis lyrata subsp. lyrata]

 Score =  166 bits (420), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 74/142 (52%), Positives = 103/142 (72%)

Query: 1   MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
           MQW GRT F L    +I +VQD P L +T +AWC+ E+IRYP YA   +G+CP WLTYLR
Sbjct: 76  MQWSGRTHFILAIVGQIKEVQDSPWLSLTLVAWCIGEMIRYPHYAFTCLGSCPYWLTYLR 135

Query: 61  YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWIK 120
           YT FI +YP G++GE+L++Y+A PY+KE N++  FF++ PFSYY+ +  + ++YPF W+K
Sbjct: 136 YTGFIIIYPTGLVGELLIMYKALPYVKETNLYVKFFSVFPFSYYDFLWDVLLVYPFLWLK 195

Query: 121 LYSHMLKQRGSKLGKRQEKKKK 142
           LY  + KQR SKLGK ++   K
Sbjct: 196 LYLQLFKQRKSKLGKSEKLHGK 217

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242090777|ref|XP_002441221.1| hypothetical protein SORBIDRAFT_09g022630 [Sorghum bicolor] gi|241946506|gb|EES19651.1| hypothetical protein SORBIDRAFT_09g022630 [Sorghum bicolor]

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 78/142 (54%), Positives = 102/142 (71%), Gaps = 1/142 (0%)

Query: 1   MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
           +QW GRT F L   R+I +VQ  PS++ITF+AW + EVIRY  YAL T+  CP WLTYLR
Sbjct: 76  LQWGGRTHFILAVVRQIPEVQRSPSVYITFIAWSISEVIRYSHYALTTLKVCPGWLTYLR 135

Query: 61  YTMFIPLYPIGVL-GEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWI 119
           YT FIPLYPIGV  GEM  +YQA P++K++N+++ FF     SY++ +  + V+YPF W+
Sbjct: 136 YTAFIPLYPIGVGPGEMWTMYQALPFVKKRNLYSGFFKKFSMSYHSFLVGVLVIYPFLWL 195

Query: 120 KLYSHMLKQRGSKLGKRQEKKK 141
           KLY H+ KQR SKLGK   KK+
Sbjct: 196 KLYLHVFKQRKSKLGKGSRKKR 217

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226495407|ref|NP_001150685.1| LOC100284318 [Zea mays] gi|195641062|gb|ACG39999.1| protein tyrosine phosphatase-like protein PTPLB [Zea mays]

 Score =  162 bits (410), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 77/142 (54%), Positives = 101/142 (71%), Gaps = 1/142 (0%)

Query: 1   MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
           +QW GR  F L   R+I +VQ  PS+FITF+AW + EVIRY  YAL+T+  CP WLTYLR
Sbjct: 76  LQWGGRIHFILAVVRQIREVQSSPSVFITFIAWSISEVIRYSHYALSTLKVCPAWLTYLR 135

Query: 61  YTMFIPLYPIGVL-GEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWI 119
           YT FIPLYPIGV  GEM  +YQA P++K++++++ FF     SY + +  + V+YPF W+
Sbjct: 136 YTAFIPLYPIGVGPGEMWTMYQALPFVKKRDLYSGFFEKFSMSYRSFLVGVLVLYPFLWL 195

Query: 120 KLYSHMLKQRGSKLGKRQEKKK 141
           KLY H+ KQR SKLGK   KK+
Sbjct: 196 KLYQHVFKQRKSKLGKGSRKKR 217

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	142
TAIR|locus:2174319	272	AT5G59770 "AT5G59770" [Arabido	1.0	0.522	0.537	1.2e-42
UNIPROTKB|Q2KIP8	254	PTPLB "Very-long-chain (3R)-3-	0.985	0.551	0.317	1.7e-18
UNIPROTKB|Q6Y1H2	254	PTPLB "Very-long-chain (3R)-3-	0.922	0.515	0.340	2.2e-18
MGI|MGI:1918007	254	Ptplb "protein tyrosine phosph	0.922	0.515	0.333	5.8e-18
UNIPROTKB|Q4W1W1	249	PTPLA "Very-long-chain (3R)-3-	0.845	0.481	0.341	3.2e-17
MGI|MGI:1353592	281	Ptpla "protein tyrosine phosph	0.845	0.427	0.333	4.1e-17
UNIPROTKB|B0YJ81	288	PTPLA "Very-long-chain (3R)-3-	0.845	0.416	0.333	1.8e-16
MGI|MGI:1889341	362	Ptplad1 "protein tyrosine phos	0.957	0.375	0.337	2.1e-16
RGD|1565496	362	Ptplad1 "protein tyrosine phos	0.957	0.375	0.337	2.1e-16
UNIPROTKB|Q5VWC8	232	PTPLAD2 "Very-long-chain (3R)-	0.915	0.560	0.338	1.6e-15

TAIR|locus:2174319 AT5G59770 "AT5G59770" [Arabidopsis thaliana (taxid:3702)]

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 78/145 (53%), Positives = 108/145 (74%)

Query:     1 MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
             MQW GRT F L    +I +VQD P L IT +AWC+ E+IRYP YA   +G CP WLTYLR
Sbjct:   127 MQWSGRTHFILAIVGQIKEVQDSPWLSITLVAWCIGEMIRYPHYAFTCLGRCPYWLTYLR 186

Query:    61 YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWIK 120
             YT FI +YP G++GE+L++Y+A PY+KE+N++ANFF++ PFSYY+ +  + ++YPF W+K
Sbjct:   187 YTGFIVIYPTGLVGELLIMYKALPYVKERNLYANFFSVFPFSYYDFLWAVLLVYPFLWLK 246

Query:   121 LYSHMLKQRGSKLGKRQE---KKKK 142
             LY  + KQR SKLGK ++   K+K+
Sbjct:   247 LYLQLFKQRKSKLGKSKKLHGKRKR 271

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q2KIP8 PTPLB "Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 2" [Bos taurus (taxid:9913)]

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 46/145 (31%), Positives = 77/145 (53%)

Query:     1 MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
             +Q   R          + +VQ   S+ +  +AW + E+IRY FY  + +   P  + + R
Sbjct:   109 IQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYLIKWAR 168

Query:    61 YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFA----NFFAILPFSYYNVVQVIFVMYPF 116
             YT+FI LYP+GV GE+L +Y A P++++  +++    N +    F YY  + +I + Y  
Sbjct:   169 YTLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNF-SFDYYAFLILIMISYIP 227

Query:   117 AWIKLYSHMLKQRGSKLGKRQEKKK 141
              + +LY HM+ QR   L   +E KK
Sbjct:   228 LFPQLYFHMIHQRRKILSHTEEHKK 252

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

UNIPROTKB|Q6Y1H2 PTPLB "Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 2" [Homo sapiens (taxid:9606)]

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 47/138 (34%), Positives = 78/138 (56%)

Query:    10 FLVTA--REIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPL 67
             FL+ A    + +VQ   S+ +  +AW + E+IRY FY  + +   P  + + RYT+FI L
Sbjct:   116 FLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYLIKWARYTLFIVL 175

Query:    68 YPIGVLGEMLLLYQAFPYMKEKNIFA----NFFAILPFSYYNVVQVIFVMYPFAWIKLYS 123
             YP+GV GE+L +Y A P++++  +++    N +    F YY  + +I + Y   + +LY 
Sbjct:   176 YPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNF-SFDYYAFLILIMISYIPIFPQLYF 234

Query:   124 HMLKQRGSKLGKRQEKKK 141
             HM+ QR   L   +E KK
Sbjct:   235 HMIHQRRKILSHTEEHKK 252

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

MGI|MGI:1918007 Ptplb "protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b" [Mus musculus (taxid:10090)]

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 46/138 (33%), Positives = 78/138 (56%)

Query:    10 FLVTA--REIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPL 67
             FL+ A    + +VQ   S+ +  +AW + E+IRY FY  + +   P  + + RYT+FI L
Sbjct:   116 FLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYIIKWARYTLFIVL 175

Query:    68 YPIGVLGEMLLLYQAFPYMKEKNIFA----NFFAILPFSYYNVVQVIFVMYPFAWIKLYS 123
             YP+GV GE+L +Y A P++++  +++    N +    F Y+  + +I + Y   + +LY 
Sbjct:   176 YPMGVTGELLTIYAALPFVRQAGLYSISLPNKYNF-SFDYHAFLILIMISYIPLFPQLYF 234

Query:   124 HMLKQRGSKLGKRQEKKK 141
             HM+ QR   L   +E KK
Sbjct:   235 HMIHQRRKVLSHTEEHKK 252

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

UNIPROTKB|Q4W1W1 PTPLA "Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 1" [Canis lupus familiaris (taxid:9615)]

 Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 43/126 (34%), Positives = 73/126 (57%)

Query:     8 LFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPL 67
             + +L+T   I  +Q+  S+ +  +AW + E+ RY FY  + +   P ++ + RY  FI L
Sbjct:   112 MVWLIT-HSIKPIQNEESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFIKWARYNFFIIL 170

Query:    68 YPIGVLGEMLLLYQAFPYMKEKNIFA----NFFAILPFSYYNVVQVIFVMYPFAWIKLYS 123
             YP+GV+GE+L +Y A PY+K+  +F+    N + +  F YY  + +    Y   + +LY 
Sbjct:   171 YPVGVVGELLTIYAALPYVKKTGMFSIRLPNKYNV-SFDYYYFLLITMASYIPLFPQLYF 229

Query:   124 HMLKQR 129
             HML+QR
Sbjct:   230 HMLRQR 235

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0004864 "protein phosphatase inhibitor activity" evidence=IEA

MGI|MGI:1353592 Ptpla "protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a" [Mus musculus (taxid:10090)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 42/126 (33%), Positives = 73/126 (57%)

Query:     8 LFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPL 67
             + +L+T   I  +Q+  S+ +  ++W + E+ RY FY  + +   P ++ + RY +FI L
Sbjct:   144 MVWLIT-HSIKPIQNEESVVLFLVSWTVTEITRYSFYTFSLLDHLPHFIKWARYNLFIIL 202

Query:    68 YPIGVLGEMLLLYQAFPYMKEKNIFA----NFFAILPFSYYNVVQVIFVMYPFAWIKLYS 123
             YP+GV GE+L +Y A PY+K+  +F+    N + +  F YY  + +    Y   + +LY 
Sbjct:   203 YPVGVAGELLTIYAALPYVKKSGMFSVRLPNKYNV-SFDYYYFLLITMASYIPLFPQLYF 261

Query:   124 HMLKQR 129
             HML+QR
Sbjct:   262 HMLRQR 267

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

UNIPROTKB|B0YJ81 PTPLA "Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 1" [Homo sapiens (taxid:9606)]

 Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 42/126 (33%), Positives = 72/126 (57%)

Query:     8 LFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPL 67
             + +L+T   I  +Q+  S+ +  +AW + E+ RY FY  + +   P ++ + RY  FI L
Sbjct:   151 MVWLIT-HSIKPIQNEESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFIKWARYNFFIIL 209

Query:    68 YPIGVLGEMLLLYQAFPYMKEKNIFA----NFFAILPFSYYNVVQVIFVMYPFAWIKLYS 123
             YP+GV GE+L +Y A P++K+  +F+    N + +  F YY  + +    Y   + +LY 
Sbjct:   210 YPVGVAGELLTIYAALPHVKKTGMFSIRLPNKYNV-SFDYYYFLLITMASYIPLFPQLYF 268

Query:   124 HMLKQR 129
             HML+QR
Sbjct:   269 HMLRQR 274

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0004725 "protein tyrosine phosphatase activity" evidence=TAS

GO:0006470 "protein dephosphorylation" evidence=TAS

GO:0007165 "signal transduction" evidence=NAS

GO:0035335 "peptidyl-tyrosine dephosphorylation" evidence=TAS

MGI|MGI:1889341 Ptplad1 "protein tyrosine phosphatase-like A domain containing 1" [Mus musculus (taxid:10090)]

 Score = 207 (77.9 bits), Expect = 2.1e-16, P = 2.1e-16
 Identities = 49/145 (33%), Positives = 77/145 (53%)

Query:     1 MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
             +Q+ GR     +    + ++Q+   +F  F +W  IE+ RYPFY L+ I      LT+LR
Sbjct:   219 IQFLGRNFILFLVFGTMEEMQNKAVVFFVFYSWSAIEIFRYPFYMLSCIDMDWKVLTWLR 278

Query:    61 YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFANFFAILP------FSYYNVVQVIFVMY 114
             YTM+IPLYP+G L E + + Q+ P   E   F+ F    P      FS++  +QV  VM 
Sbjct:   279 YTMWIPLYPLGCLSEAVAVIQSIPVFNESGRFS-FTLPYPVKMKVRFSFF--LQVYLVML 335

Query:   115 PFAWIKLYSHMLKQRGSKLGKRQEK 139
                    + H+ KQR  + G++++K
Sbjct:   336 FLGLYINFRHLYKQRRRRYGQKKKK 360

GO:0005515 "protein binding" evidence=IPI

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=IDA

GO:0007254 "JNK cascade" evidence=IDA

GO:0007266 "Rho protein signal transduction" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

RGD|1565496 Ptplad1 "protein tyrosine phosphatase-like A domain containing 1" [Rattus norvegicus (taxid:10116)]

 Score = 207 (77.9 bits), Expect = 2.1e-16, P = 2.1e-16
 Identities = 49/145 (33%), Positives = 77/145 (53%)

Query:     1 MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
             +Q+ GR     +    + ++Q+   +F  F +W  IE+ RYPFY L+ I      LT+LR
Sbjct:   219 IQFLGRNFILFLVFGTMEEMQNKAVVFFVFYSWSAIEIFRYPFYMLSCIDMDWKVLTWLR 278

Query:    61 YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFANFFAILP------FSYYNVVQVIFVMY 114
             YTM+IPLYP+G L E + + Q+ P   E   F+ F    P      FS++  +QV  VM 
Sbjct:   279 YTMWIPLYPLGCLSEAVAVIQSIPVFNESGRFS-FTLPYPLRMKVRFSFF--LQVYLVML 335

Query:   115 PFAWIKLYSHMLKQRGSKLGKRQEK 139
                    + H+ KQR  + G++++K
Sbjct:   336 FLGLYINFRHLYKQRRRRYGQKKKK 360

GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=ISO

GO:0007254 "JNK cascade" evidence=ISO

GO:0007266 "Rho protein signal transduction" evidence=ISO

UNIPROTKB|Q5VWC8 PTPLAD2 "Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 4" [Homo sapiens (taxid:9606)]

 Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 47/139 (33%), Positives = 78/139 (56%)

Query:     8 LFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPL 67
             LF ++T++E  +VQ+   + + F+ W L++++RY +  L+ IG     LT+L  T+++P+
Sbjct:    98 LFVVITSQE--EVQEKYVVCVLFVFWNLLDMVRYTYSMLSVIGISYAVLTWLSQTLWMPI 155

Query:    68 YPIGVLGEMLLLYQAFPYMKEKNIFANFFAILPFS---YYNVVQVIFVMYPFAWIKL-YS 123
             YP+ VL E   +YQ+ PY +    F  +   LPF    Y+  V  I++M  F  +   YS
Sbjct:   156 YPLCVLAEAFAIYQSLPYFES---FGTYSTKLPFDLSIYFPYVLKIYLMMLFIGMYFTYS 212

Query:   124 HMLKQRGSKLGKRQEKKKK 142
             H+  +R   LG    KKKK
Sbjct:   213 HLYSERRDILGIFPIKKKK 231

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.2.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_I1406 hypothetical protein (219 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	142
pfam04387	161	pfam04387, PTPLA, Protein tyrosine phosphatase-lik	2e-45
PLN02838	221	PLN02838, PLN02838, 3-hydroxyacyl-CoA dehydratase	1e-17
COG5198	209	COG5198, Ptpl, Protein tyrosine phosphatase-like p	2e-11

>gnl|CDD|202993 pfam04387, PTPLA, Protein tyrosine phosphatase-like protein, PTPLA

 Score =  145 bits (367), Expect = 2e-45
 Identities = 57/135 (42%), Positives = 81/135 (60%)

Query: 1   MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
           +Q   R          + +VQ  P++    +AW + E+IRY +YALN +G  P WLT+LR
Sbjct: 25  LQVSSRLFVVWGILYSLPEVQASPAVPSLLIAWSITEIIRYSYYALNLLGTVPYWLTWLR 84

Query: 61  YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWIK 120
           YT+FI LYP+GVL E+LL+YQ+ PY K+ ++         FSYY  +  + ++Y   +  
Sbjct: 85  YTLFIVLYPLGVLSELLLIYQSLPYTKKYSLEMPNALNFSFSYYYFLIFVLLLYIPGFPV 144

Query: 121 LYSHMLKQRGSKLGK 135
           LYSHMLKQR   LGK
Sbjct: 145 LYSHMLKQRRKVLGK 159

This family includes the mammalian protein tyrosine phosphatase-like protein, PTPLA. A significant variation of PTPLA from other protein tyrosine phosphatases is the presence of proline instead of catalytic arginine at the active site. It is thought that PTPLA proteins have a role in the development, differentiation, and maintenance of a number of tissue types. Length = 161

>gnl|CDD|166479 PLN02838, PLN02838, 3-hydroxyacyl-CoA dehydratase subunit of elongase

 Score = 75.6 bits (186), Expect = 1e-17
 Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 4/121 (3%)

Query: 19  QVQDHPSLFITFLAWCLIEVIRYPFYALN-TIGACPPWLTYLRYTMFIPLYPIGVLGEML 77
           +V+ H  +    ++W + E+IRY F+ +    G  P WL +LRY+ F+ LYP G+  E+ 
Sbjct: 97  EVRSHILVTSLVISWSITEIIRYSFFGMKEAFGFAPSWLLWLRYSTFLLLYPTGITSEVG 156

Query: 78  LLYQAFPYMKEKNIFA-NFFAILPFSYYNVVQVIFVM--YPFAWIKLYSHMLKQRGSKLG 134
           L+Y A PYMK    +         FS+      I V+  Y      +YS+ML QR   L 
Sbjct: 157 LIYIALPYMKASEKYCLRMPNKWNFSFDYFYASILVLAIYVPGSPHMYSYMLGQRKKALS 216

Query: 135 K 135
           K
Sbjct: 217 K 217

Length = 221

>gnl|CDD|227525 COG5198, Ptpl, Protein tyrosine phosphatase-like protein (contains Pro instead of catalytic Arg) [General function prediction only]

 Score = 58.8 bits (142), Expect = 2e-11
 Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 11/129 (8%)

Query: 1   MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
           MQ   R             + +  +      AW + E++RY FY     G  P  L  LR
Sbjct: 76  MQVISRLFIVWGVFYPYCGIINSWTYPSITTAWSITEIVRYAFYTFRLNGI-PNTLRVLR 134

Query: 61  YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWIK 120
           Y +F+ LYPIG + EM  L     Y     IF+    +LP        ++ ++Y   +I 
Sbjct: 135 YNLFLILYPIGFVSEMYCLRAL--YNAAGKIFSLLKVVLP--------IVMLLYIPGFIF 184

Query: 121 LYSHMLKQR 129
           L+SHML QR
Sbjct: 185 LFSHMLAQR 193

Length = 209

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	142
PF04387	164	PTPLA: Protein tyrosine phosphatase-like protein,	100.0
PLN02838	221	3-hydroxyacyl-CoA dehydratase subunit of elongase	100.0
KOG3187	223	consensus Protein tyrosine phosphatase-like protei	100.0
COG5198	209	Ptpl Protein tyrosine phosphatase-like protein (co	100.0

>PF04387 PTPLA: Protein tyrosine phosphatase-like protein, PTPLA; InterPro: IPR007482 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity

Probab=100.00  E-value=2.1e-55  Score=337.69  Aligned_cols=137  Identities=44%  Similarity=0.831  Sum_probs=131.8

Q ss_pred             CceehhhhhhhheeccccccCCchHHHHHHHHHHhhhhhhhhhHHHHhhCCCCchhhhcccccccccccchhhHHHHHHH
Q 032373            1 MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPLYPIGVLGEMLLLY   80 (142)
Q Consensus         1 ~QV~sR~~vv~~v~~~~p~~~~~~~~~~l~~aWsi~EviRY~yY~~~~~~~~p~~L~WLRYt~FivLYPlGv~~E~~~i~   80 (142)
                      +||+||++++|++++..||++.++++++|++|||++|+|||+||+++++|.+|++|+|||||+|+||||+|++||+.+++
T Consensus        25 ~Qv~sR~~vv~~v~~~~p~~~~~~~~~~l~~aWsl~EviRY~yY~~~l~~~~p~~L~WLRYs~FivLYPlG~~~E~~~~~  104 (164)
T PF04387_consen   25 MQVFSRLFVVWGVIYPFPEVQSSPAVPLLLIAWSLTEVIRYPYYALKLLGIVPYWLTWLRYSAFIVLYPLGILSELLLIY  104 (164)
T ss_pred             HHHHHHHHeehhhhccccccccccchhhHHHHHHhhhcchhHHHHHHhcCCCchHHHHHHHhhHhhccchHHHHHHHHHH
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Hhccchhhhcccccccc---CccchHHHHHHHHHHHhhhHHHHHHHHHHHHHcccccchh
Q 032373           81 QAFPYMKEKNIFANFFA---ILPFSYYNVVQVIFVMYPFAWIKLYSHMLKQRGSKLGKRQ  137 (142)
Q Consensus        81 ~alp~~~~~~~~s~~mP---~~~f~~~~~~~~~l~~y~pg~~~ly~hMl~QRkk~l~~~~  137 (142)
                      +|+|++++++.++.+||   |++|++.+++++++++|+||+|++|+||++||||+++|+|
T Consensus       105 ~al~~~~~~~~~~~~~pn~~n~~~~~~~~~~~~l~~y~pg~~~ly~hM~~qRrK~l~~~~  164 (164)
T PF04387_consen  105 RALPYIKETKRYSVRMPNSWNFSFSYYYFLIFVLLLYIPGFPFLYSHMLKQRRKKLGKKK  164 (164)
T ss_pred             HhCcccccCCeeeeecCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence            99999999999999999   6667777889999999999999999999999999997653

Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This family includes the mammalian protein tyrosine phosphatase-like protein, PTPLA. A significant variation of PTPLA from other protein tyrosine phosphatases is the presence of proline instead of catalytic arginine at the active site. It is thought that PTPLA proteins have a role in the development, differentiation, and maintenance of a number of tissue types [].

>PLN02838 3-hydroxyacyl-CoA dehydratase subunit of elongase

Probab=100.00  E-value=2.2e-54  Score=345.54  Aligned_cols=136  Identities=30%  Similarity=0.594  Sum_probs=127.4

Q ss_pred             CceehhhhhhhheeccccccCCchHHHHHHHHHHhhhhhhhhhHHHH-hhCCCCchhhhcccccccccccchhhHHHHHH
Q 032373            1 MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALN-TIGACPPWLTYLRYTMFIPLYPIGVLGEMLLL   79 (142)
Q Consensus         1 ~QV~sR~~vv~~v~~~~p~~~~~~~~~~l~~aWsi~EviRY~yY~~~-~~~~~p~~L~WLRYt~FivLYPlGv~~E~~~i   79 (142)
                      +||+||++++|+|++..||+++++.++.|++|||++|+||||||+++ +.|.+|++|+|||||+|+||||+|+.||+.+|
T Consensus        79 ~QV~sR~~iv~~v~~~~p~~~~~~~~~~l~~aWs~tEvIRY~yY~~~~~~~~~p~~L~WLRYt~FivLYPlGi~~E~~~i  158 (221)
T PLN02838         79 PQIGSRLFLTWGILWSFPEVRSHILVTSLVISWSITEIIRYSFFGMKEAFGFAPSWLLWLRYSTFLLLYPTGITSEVGLI  158 (221)
T ss_pred             HHHHHHHHHHHHHhhcCcchhcccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHhccceecchHHHHHHHHH
Confidence            69999999999999999999999999999999999999999999997 55999999999999999999999999999999


Q ss_pred             HHhccchhhhcccccccc---CccchHHHHHHHHHHHhhhHHHHHHHHHHHHHcccccch
Q 032373           80 YQAFPYMKEKNIFANFFA---ILPFSYYNVVQVIFVMYPFAWIKLYSHMLKQRGSKLGKR  136 (142)
Q Consensus        80 ~~alp~~~~~~~~s~~mP---~~~f~~~~~~~~~l~~y~pg~~~ly~hMl~QRkk~l~~~  136 (142)
                      |+|+|++++++.++.+||   |++|++.+++++++++|+||+|+||+||++||||+++++
T Consensus       159 ~~al~~~~~~~~~s~~~Pn~~n~sf~~~~~l~~~l~~YiPg~~~ly~hM~~QRkK~l~~k  218 (221)
T PLN02838        159 YIALPYMKASEKYCLRMPNKWNFSFDYFYASILVLAIYVPGSPHMYSYMLGQRKKALSKS  218 (221)
T ss_pred             HHhchhhhcccccchhcCcccccchhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccc
Confidence            999999999999999999   445555567889999999999999999999999999643

>KOG3187 consensus Protein tyrosine phosphatase-like protein PTPLA (contains Pro instead of catalytic Arg) [General function prediction only]

Probab=100.00  E-value=1.5e-49  Score=316.59  Aligned_cols=141  Identities=38%  Similarity=0.714  Sum_probs=133.5

Q ss_pred             CceehhhhhhhheeccccccCCchHHHHHHHHHHhhhhhhhhhHHHHhhCCCCchhhhcccccccccccchhhHHHHHHH
Q 032373            1 MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPLYPIGVLGEMLLLY   80 (142)
Q Consensus         1 ~QV~sR~~vv~~v~~~~p~~~~~~~~~~l~~aWsi~EviRY~yY~~~~~~~~p~~L~WLRYt~FivLYPlGv~~E~~~i~   80 (142)
                      +||.||++++|++++..++++.++++..++.||+++|+|||+||+++++|..|++++|||||+|++|||+|++||+.+++
T Consensus        80 ~Qv~sRl~il~~i~~~~~~~~~~~~~~~l~~~ws~tEIiRY~fY~f~~~~~~p~~l~wlRYt~Fi~LYP~Gi~~E~l~i~  159 (223)
T KOG3187|consen   80 FQVSSRLFILWGIFHMCSIIQASAVVFFLLIAWSLTEIIRYSFYAFNLLGVLPKLLTWLRYTLFILLYPIGITSELLTLY  159 (223)
T ss_pred             eeecccceehhhhhhccchhhccchHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhHhhhhhheeeecceehhhHHHHH
Confidence            59999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Hhccchhhhcccccccc---CccchHHHHHHHHHHHhhhHHHHHHHHHHHHHcccccchhhhhc
Q 032373           81 QAFPYMKEKNIFANFFA---ILPFSYYNVVQVIFVMYPFAWIKLYSHMLKQRGSKLGKRQEKKK  141 (142)
Q Consensus        81 ~alp~~~~~~~~s~~mP---~~~f~~~~~~~~~l~~y~pg~~~ly~hMl~QRkk~l~~~~~k~k  141 (142)
                      +|+|++++++.+|++||   |++||+.+|+++++++|+||+|++|+||.+||||.++++++|||
T Consensus       160 ~al~~~~~~~~~sv~~pn~~n~~f~~~~fL~i~ml~Yipgf~~l~~hm~~QRkk~l~~~r~~~~  223 (223)
T KOG3187|consen  160 AALPAAGETERFSVVMPNKLNISFDFFSFLWIVMLLYIPGFYQLYSHMLKQRKKILKKKRKKKK  223 (223)
T ss_pred             HHHHHhcccceeEEEcCccccchhHHHHHHHHHHHHHHcchHHHHHHHHHHHHhhcccccccCC
Confidence            99999999999999999   55666667788889999999999999999999999988776653

>COG5198 Ptpl Protein tyrosine phosphatase-like protein (contains Pro instead of catalytic Arg) [General function prediction only]

Probab=100.00  E-value=5.9e-38  Score=241.66  Aligned_cols=125  Identities=30%  Similarity=0.491  Sum_probs=107.5

Q ss_pred             CceehhhhhhhheeccccccCCchHHHHHHHHHHhhhhhhhhhHHHHhhCCCCchhhhcccccccccccchhhHHHHHHH
Q 032373            1 MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPLYPIGVLGEMLLLY   80 (142)
Q Consensus         1 ~QV~sR~~vv~~v~~~~p~~~~~~~~~~l~~aWsi~EviRY~yY~~~~~~~~p~~L~WLRYt~FivLYPlGv~~E~~~i~   80 (142)
                      +||.||++++|||+++.-.+-+++.++.+.+|||++|++||.||++++-| .|..|+|||||+|.+|||+|+.+|+.|++
T Consensus        76 ~Qv~SRl~ivwgvf~p~~~~i~s~~y~s~~~aWsiteivRYafY~F~lng-~p~~l~~lRYNlFlilyPiG~~sE~~~~~  154 (209)
T COG5198          76 MQVISRLFIVWGVFYPYCGIINSWTYPSITTAWSITEIVRYAFYTFRLNG-IPNTLRVLRYNLFLILYPIGFVSEMYCLR  154 (209)
T ss_pred             HHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHhcC-CchhhhhhhhhhhhhhcchHHHHHHHHHH
Confidence            69999999999999665555459999999999999999999999999866 89999999999999999999999999999


Q ss_pred             HhccchhhhccccccccCccchHH-HHHHHHHHHhhhHHHHHHHHHHHHHcccccchh
Q 032373           81 QAFPYMKEKNIFANFFAILPFSYY-NVVQVIFVMYPFAWIKLYSHMLKQRGSKLGKRQ  137 (142)
Q Consensus        81 ~alp~~~~~~~~s~~mP~~~f~~~-~~~~~~l~~y~pg~~~ly~hMl~QRkk~l~~~~  137 (142)
                      .+..-.+..  |         ++. -.+.+++.+|+|||++||+||++||||..+.++
T Consensus       155 ~~~naa~~~--~---------Sllk~vl~~~ml~YiPGf~~lf~HMlaQRkk~~K~~r  201 (209)
T COG5198         155 ALYNAAGKI--F---------SLLKVVLPIVMLLYIPGFIFLFSHMLAQRKKSRKVKR  201 (209)
T ss_pred             HHHHHHHHH--H---------HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHH
Confidence            987654441  1         222 345678899999999999999999999985433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00