Citrus Sinensis ID: 032430

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-
Protein Sequence
MSLSLQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAYFQFSPSTMDQLGLEGCKAHSSNICVDDLDIDAVVYNTLSTKFPEKMGVERITHHLLHGKILLEVEVSMSPDTSIR
Secondary Structure (PSIPRED)
cccccccccccEEEccccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHcccEEEEEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccEEEEEEccEEEEEEEEEcccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccEEEcccccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccEEEEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccEEEEEEEEEccEEEEEEEEEcccccccc
Coil and Loop (DISEMBL)
mslslqgchrlrgrragsslyldvhivvdpfssvsaahgvgenvrhqihkshpevsevfihidpayfqfspstmdqlglegckahssnicvddldIDAVVYNTlstkfpekmgVERITHHLLHGKILLEVEvsmspdtsir
Flexible Loop (DISEMBL)
mslslqgcHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAYFQFSPSTMDQLGLEGCKAHSSNICVDDLDIDAVVYNTLSTKFPEKMGVERITHHllhgkillevevsmspdtsir
Low Complexity Region (SEG)
MSLSLQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAYFQFSPSTMDQLGLEGCKAHSSNICVDDLDIDAVVYNTLSTKFPEKMGVERITHHLLHGKILLEVEVSMSPDTSIR
Disordered region (IsUnstruct)
**************RAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAYFQFSPSTMDQLGLEGCKAHSSNICVDDLDIDAVVYNTLSTKFPEKMGVERITHHLLHGKILLEVE**********
Disordered Region (DISOPRED)
MSLSLQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAYF*****************************DAVVYNTLSTKFPEKMGVERITHHLLHGKILLEVEVSMSPDTSI*
Disordered Region (DISEMBL)
MSLSLQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAYFQFSPSTMDQLGLEGCKAHSSNICVDDLDIDAVVYNTLSTKFPEKMGVERITHHLLHGKILLEVEVS********
Disordered Region (DISPRO)
****LQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAYFQ*******************NICVDDLDIDAVVYNTLSTKFPEKMGVERITHHLLHGKILLEVEVSMSPDTSIR
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSLSLQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAYFQFSPSTMDQLGLEGCKAHSSNICVDDLDIDAVVYNTLSTKFPEKMGVERITHHLLHGKILLEVEVSMSPDTSIR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	141	2.2.26 [Sep-21-2011]
Q8L725	471	Metal tolerance protein C	yes	no	0.943	0.282	0.598	4e-39
Q10LJ2	389	Metal tolerance protein 2	yes	no	0.411	0.149	0.758	8e-20

>sp|Q8L725|MTPC1_ARATH Metal tolerance protein C1 OS=Arabidopsis thaliana GN=MTPC1 PE=2 SV=1

 Score =  159 bits (403), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 82/137 (59%), Positives = 101/137 (73%), Gaps = 4/137 (2%)

Query: 5   LQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
           ++GCHRLRGRRAGSSLYLDVHIVVDPFSSVS AH VGE VR QI+ +HPEVSEVFIHIDP
Sbjct: 307 VKGCHRLRGRRAGSSLYLDVHIVVDPFSSVSVAHEVGEYVRRQINLNHPEVSEVFIHIDP 366

Query: 65  AYFQFSPSTMDQLGLEGCKAHSSNICVDDLDIDAVVYNTLSTKFPEKMGVERITHHLLHG 124
           A+ QFS ST D   +       SNIC +   ++A V +  S++  EK+ ++RIT HLLH 
Sbjct: 367 AFLQFSCSTKDHDSI----TKESNICQEIKHVEATVSDIFSSQLSEKLTIKRITPHLLHS 422

Query: 125 KILLEVEVSMSPDTSIR 141
           KILL++ V+M    SI+
Sbjct: 423 KILLQIVVAMPSTMSIQ 439

Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis.
Arabidopsis thaliana (taxid: 3702)

>sp|Q10LJ2|MTP2_ORYSJ Metal tolerance protein 2 OS=Oryza sativa subsp. japonica GN=MTP2 PE=2 SV=1

 Score = 95.5 bits (236), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 44/58 (75%), Positives = 51/58 (87%)

Query: 5   LQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHI 62
           ++GCHRLRGR+AG+SLYLDVHI V PF SVSAAH +GE VRHQI KSH +V+EVFIHI
Sbjct: 321 VKGCHRLRGRKAGTSLYLDVHIEVYPFLSVSAAHDIGETVRHQIQKSHNQVAEVFIHI 378

Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	141
224132372	453	metal tolerance protein [Populus trichoc	0.978	0.304	0.625	2e-43
359479745	520	PREDICTED: metal tolerance protein C1 [V	0.964	0.261	0.673	2e-42
449436799	500	PREDICTED: metal tolerance protein C1-li	0.950	0.268	0.628	1e-40
255559272	479	cation efflux protein/ zinc transporter,	0.921	0.271	0.602	7e-40
297828503	462	hypothetical protein ARALYDRAFT_322424 [	0.964	0.294	0.613	1e-39
30690801	471	metal tolerance protein C1 [Arabidopsis	0.943	0.282	0.598	3e-37
30690804	468	metal tolerance protein C1 [Arabidopsis	0.914	0.275	0.611	1e-36
3738295	483	unknown protein [Arabidopsis thaliana]	0.943	0.275	0.550	1e-34
356500266	491	PREDICTED: metal tolerance protein C1-li	0.936	0.268	0.591	2e-34
356535392	490	PREDICTED: metal tolerance protein C1-li	0.936	0.269	0.573	3e-34

>gi|224132372|ref|XP_002321323.1| metal tolerance protein [Populus trichocarpa] gi|222862096|gb|EEE99638.1| metal tolerance protein [Populus trichocarpa]

 Score =  179 bits (455), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 87/139 (62%), Positives = 104/139 (74%), Gaps = 1/139 (0%)

Query: 4   SLQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHID 63
            +QGCHRLRGRRAGSSLYLDVHIVVDPF SVSAAH +GENVR +IH SHP ++EVFIHID
Sbjct: 284 GVQGCHRLRGRRAGSSLYLDVHIVVDPFLSVSAAHEIGENVRQEIHNSHPGIAEVFIHID 343

Query: 64  PAYFQFSPSTMDQ-LGLEGCKAHSSNICVDDLDIDAVVYNTLSTKFPEKMGVERITHHLL 122
           PAY   SP+ MDQ   L G    +  I +DD DI+ +V +  S+K PEK+ VERIT HL+
Sbjct: 344 PAYLCISPTMMDQEENLNGKVNQNKKISLDDKDIELIVSDVFSSKIPEKIEVERITRHLM 403

Query: 123 HGKILLEVEVSMSPDTSIR 141
            G ILL++E+SM P   IR
Sbjct: 404 QGNILLQIEISMRPSILIR 422

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359479745|ref|XP_002269478.2| PREDICTED: metal tolerance protein C1 [Vitis vinifera] gi|296086610|emb|CBI32245.3| unnamed protein product [Vitis vinifera]

 Score =  177 bits (448), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/138 (67%), Positives = 104/138 (75%), Gaps = 2/138 (1%)

Query: 5   LQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
           ++GCHRLRGRRAGSSLYLDVHI VDPFSSVSAAH VGENVRHQIHKSHP VSEVFIHIDP
Sbjct: 331 VKGCHRLRGRRAGSSLYLDVHIEVDPFSSVSAAHNVGENVRHQIHKSHPGVSEVFIHIDP 390

Query: 65  AYFQFSPSTMDQL-GLEGCKAHSSNICVDDLDIDAVVYNTLSTKFPEKMGVERITHHLLH 123
           A  Q SPS M+Q   L+       N+  +   ++ +V N LS+KF EKM VERIT HLL 
Sbjct: 391 AISQISPSIMEQQENLKEMNYQKRNVSSEHNGVE-IVSNVLSSKFSEKMVVERITQHLLQ 449

Query: 124 GKILLEVEVSMSPDTSIR 141
           GK LL+VEVSM P   IR
Sbjct: 450 GKTLLQVEVSMPPHILIR 467

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436799|ref|XP_004136180.1| PREDICTED: metal tolerance protein C1-like [Cucumis sativus] gi|449524166|ref|XP_004169094.1| PREDICTED: metal tolerance protein C1-like [Cucumis sativus]

 Score =  171 bits (432), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 88/140 (62%), Positives = 103/140 (73%), Gaps = 6/140 (4%)

Query: 5   LQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
           ++GCHRLRGRRAGSSLYLDVHI VDPF SVSAAH +GENVRH+IH SHPEVSEVFIHIDP
Sbjct: 326 VKGCHRLRGRRAGSSLYLDVHIEVDPFLSVSAAHSIGENVRHEIHTSHPEVSEVFIHIDP 385

Query: 65  AYFQFSPSTMDQLGLEGCKAHSSNICVD---DLDIDAVVYNTLSTKFPEKMGVERITHHL 121
           +   F P   +Q   +   A +SN   D     +I+A V + + +KFPE M VERIT HL
Sbjct: 386 SISHFPPKLSNQ---QAASAGTSNQSTDFPLTENIEATVSDIVQSKFPENMMVERITPHL 442

Query: 122 LHGKILLEVEVSMSPDTSIR 141
           L GKILL++EVSM PD  IR
Sbjct: 443 LQGKILLQIEVSMPPDLLIR 462

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559272|ref|XP_002520656.1| cation efflux protein/ zinc transporter, putative [Ricinus communis] gi|223540041|gb|EEF41618.1| cation efflux protein/ zinc transporter, putative [Ricinus communis]

 Score =  168 bits (425), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 82/136 (60%), Positives = 100/136 (73%), Gaps = 6/136 (4%)

Query: 5   LQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
           ++GCHRLRGRRAGSSL+LDVHI VDPF SVSAAH +GE VR +IH+S+PE++EVFIHIDP
Sbjct: 310 VKGCHRLRGRRAGSSLHLDVHIEVDPFLSVSAAHEIGEKVRQEIHESYPEIAEVFIHIDP 369

Query: 65  AYFQFSPSTMDQLGLEGCKAHSSNICVDDLDIDAVVYNTLSTKFPEKMGVERITHHLLHG 124
           AY  FS +      +EG       I +DD DI  ++ NT  +KFPEKM VERIT H L  
Sbjct: 370 AYLHFSSN------VEGTADQDRYISLDDKDIAMIISNTFLSKFPEKMEVERITRHFLQQ 423

Query: 125 KILLEVEVSMSPDTSI 140
           K+LLE+EVS+ PD  I
Sbjct: 424 KVLLEMEVSLPPDILI 439

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297828503|ref|XP_002882134.1| hypothetical protein ARALYDRAFT_322424 [Arabidopsis lyrata subsp. lyrata] gi|297327973|gb|EFH58393.1| hypothetical protein ARALYDRAFT_322424 [Arabidopsis lyrata subsp. lyrata]

 Score =  167 bits (423), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 84/137 (61%), Positives = 103/137 (75%), Gaps = 1/137 (0%)

Query: 5   LQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
           ++GCHRLRGRRAGSSLYLDVHIVVDPFSSVS AH VGE VR QI+ +HPEVSEVFIHIDP
Sbjct: 295 VKGCHRLRGRRAGSSLYLDVHIVVDPFSSVSVAHEVGEYVRRQINMNHPEVSEVFIHIDP 354

Query: 65  AYFQFSPSTMDQLGLEGCKAHSSNICVDDLDIDAVVYNTLSTKFPEKMGVERITHHLLHG 124
           A+ QFS STMD   +       SNIC +   ++A V +  S++F EKM ++RIT HLLH 
Sbjct: 355 AFLQFSCSTMDHDSITKSN-QESNICQEIKHVEATVSDIFSSQFSEKMTIKRITTHLLHS 413

Query: 125 KILLEVEVSMSPDTSIR 141
           KILL++ V+M    +I+
Sbjct: 414 KILLQIVVAMPSTMTIQ 430

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30690801|ref|NP_182304.2| metal tolerance protein C1 [Arabidopsis thaliana] gi|71151963|sp|Q8L725.1|MTPC1_ARATH RecName: Full=Metal tolerance protein C1; Short=AtMTPc1; AltName: Full=AtMTP6 gi|22655099|gb|AAM98140.1| unknown protein [Arabidopsis thaliana] gi|30387579|gb|AAP31955.1| At2g47830 [Arabidopsis thaliana] gi|330255799|gb|AEC10893.1| metal tolerance protein C1 [Arabidopsis thaliana]

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 82/137 (59%), Positives = 101/137 (73%), Gaps = 4/137 (2%)

Query: 5   LQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
           ++GCHRLRGRRAGSSLYLDVHIVVDPFSSVS AH VGE VR QI+ +HPEVSEVFIHIDP
Sbjct: 307 VKGCHRLRGRRAGSSLYLDVHIVVDPFSSVSVAHEVGEYVRRQINLNHPEVSEVFIHIDP 366

Query: 65  AYFQFSPSTMDQLGLEGCKAHSSNICVDDLDIDAVVYNTLSTKFPEKMGVERITHHLLHG 124
           A+ QFS ST D   +       SNIC +   ++A V +  S++  EK+ ++RIT HLLH 
Sbjct: 367 AFLQFSCSTKDHDSI----TKESNICQEIKHVEATVSDIFSSQLSEKLTIKRITPHLLHS 422

Query: 125 KILLEVEVSMSPDTSIR 141
           KILL++ V+M    SI+
Sbjct: 423 KILLQIVVAMPSTMSIQ 439

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30690804|ref|NP_850480.1| metal tolerance protein C1 [Arabidopsis thaliana] gi|330255800|gb|AEC10894.1| metal tolerance protein C1 [Arabidopsis thaliana]

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 82/134 (61%), Positives = 100/134 (74%), Gaps = 5/134 (3%)

Query: 5   LQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
           ++GCHRLRGRRAGSSLYLDVHIVVDPFSSVS AH VGE VR QI+ +HPEVSEVFIHIDP
Sbjct: 307 VKGCHRLRGRRAGSSLYLDVHIVVDPFSSVSVAHEVGEYVRRQINLNHPEVSEVFIHIDP 366

Query: 65  AYFQFSPSTMDQLGLEGCKAHSSNICVDDLDIDAVVYNTLSTKFPEKMGVERITHHLLHG 124
           A+ QFS ST D   +       SNIC +   ++A V +  S++  EK+ ++RIT HLLH 
Sbjct: 367 AFLQFSCSTKDHDSI----TKESNICQEIKHVEATVSDIFSSQLSEKLTIKRITPHLLHS 422

Query: 125 KILLEVEVSMSPDT 138
           KILL++ V+M P T
Sbjct: 423 KILLQIVVAM-PST 435

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3738295|gb|AAC63637.1| unknown protein [Arabidopsis thaliana]

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 82/149 (55%), Positives = 101/149 (67%), Gaps = 16/149 (10%)

Query: 5   LQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHI-- 62
           ++GCHRLRGRRAGSSLYLDVHIVVDPFSSVS AH VGE VR QI+ +HPEVSEVFIHI  
Sbjct: 307 VKGCHRLRGRRAGSSLYLDVHIVVDPFSSVSVAHEVGEYVRRQINLNHPEVSEVFIHIGI 366

Query: 63  ----------DPAYFQFSPSTMDQLGLEGCKAHSSNICVDDLDIDAVVYNTLSTKFPEKM 112
                     DPA+ QFS ST D   +       SNIC +   ++A V +  S++  EK+
Sbjct: 367 EHLSSQTFLADPAFLQFSCSTKDHDSI----TKESNICQEIKHVEATVSDIFSSQLSEKL 422

Query: 113 GVERITHHLLHGKILLEVEVSMSPDTSIR 141
            ++RIT HLLH KILL++ V+M    SI+
Sbjct: 423 TIKRITPHLLHSKILLQIVVAMPSTMSIQ 451

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500266|ref|XP_003518954.1| PREDICTED: metal tolerance protein C1-like [Glycine max]

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/137 (59%), Positives = 96/137 (70%), Gaps = 5/137 (3%)

Query: 5   LQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
           ++GCHRLRGRRAGS LYLDVHI VDPFSSVSAAH +GENVRHQIHKSHP V EVFIHIDP
Sbjct: 319 VKGCHRLRGRRAGSYLYLDVHIEVDPFSSVSAAHDIGENVRHQIHKSHPTVVEVFIHIDP 378

Query: 65  AYFQFSPSTMDQLGLEGCKAHSSNICV-DDLDIDAVVYNTLSTKFPEKMGVERITHHLLH 123
           A    S     Q    G   HSS +   +D +I  +V + +S+ FP+ M VE IT H+  
Sbjct: 379 AMSHVS---CQQDSWSGGMDHSSIVPAEEDSNIKGIVSDIISSNFPQ-MSVECITRHMFQ 434

Query: 124 GKILLEVEVSMSPDTSI 140
            KI+L++EVSM PD  I
Sbjct: 435 SKIVLQIEVSMPPDIPI 451

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535392|ref|XP_003536229.1| PREDICTED: metal tolerance protein C1-like [Glycine max]

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 78/136 (57%), Positives = 97/136 (71%), Gaps = 4/136 (2%)

Query: 5   LQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
           ++GCH LRGRRAGS LYLDVHI VDPFSSVSAAH +GENVRHQIHKSHP V EVFIHIDP
Sbjct: 319 VKGCHCLRGRRAGSYLYLDVHIEVDPFSSVSAAHDIGENVRHQIHKSHPTVVEVFIHIDP 378

Query: 65  AYFQFSPSTMDQLGLEGCKAHSSNICVDDLDIDAVVYNTLSTKFPEKMGVERITHHLLHG 124
           A    S ++  +    G    SS +  +D +I+ +V + +S+ FP+ M VERI  H+   
Sbjct: 379 A---MSHASHQRDSWSGDMNQSSIVPAEDSNIEGIVSDIISSNFPQ-MSVERIARHMFQS 434

Query: 125 KILLEVEVSMSPDTSI 140
           KI+L++EVSM PD  I
Sbjct: 435 KIVLQIEVSMPPDIPI 450

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	141
TAIR|locus:2043328	471	AT2G47830 [Arabidopsis thalian	0.943	0.282	0.598	3.9e-37
TIGR_CMR|CBU_1362	378	CBU_1362 "cation-efflux family	0.397	0.148	0.482	2e-07
TIGR_CMR|GSU_2613	296	GSU_2613 "cation efflux family	0.397	0.189	0.357	5.5e-06
UNIPROTKB|Q4K5J6	298	fieF "Cation diffusion facilit	0.404	0.191	0.344	3.3e-05
TIGR_CMR|CHY_0502	303	CHY_0502 "cation efflux family	0.390	0.181	0.357	4.4e-05
TIGR_CMR|DET_0331	311	DET_0331 "cation efflux family	0.531	0.241	0.308	0.00031

TAIR|locus:2043328 AT2G47830 [Arabidopsis thaliana (taxid:3702)]

 Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
 Identities = 82/137 (59%), Positives = 101/137 (73%)

Query:     5 LQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
             ++GCHRLRGRRAGSSLYLDVHIVVDPFSSVS AH VGE VR QI+ +HPEVSEVFIHIDP
Sbjct:   307 VKGCHRLRGRRAGSSLYLDVHIVVDPFSSVSVAHEVGEYVRRQINLNHPEVSEVFIHIDP 366

Query:    65 AYFQFSPSTMDQLGLEGCKAHSSNICVDDLDIDAVVYNTLSTKFPEKMGVERITHHLLHG 124
             A+ QFS ST D   +       SNIC +   ++A V +  S++  EK+ ++RIT HLLH 
Sbjct:   367 AFLQFSCSTKDHDSI----TKESNICQEIKHVEATVSDIFSSQLSEKLTIKRITPHLLHS 422

Query:   125 KILLEVEVSMSPDTSIR 141
             KILL++ V+M    SI+
Sbjct:   423 KILLQIVVAMPSTMSIQ 439

GO:0006812 "cation transport" evidence=IEA;ISS

GO:0008324 "cation transmembrane transporter activity" evidence=IEA;ISS

GO:0015562 "efflux transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TIGR_CMR|CBU_1362 CBU_1362 "cation-efflux family protein" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 126 (49.4 bits), Expect = 2.0e-07, P = 2.0e-07
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query:     9 HRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
             H+LR R  G ++++DVHI V P  SVS  H VGE V   + KS   V++V +HIDP
Sbjct:   237 HQLRTRYHGGNIFVDVHIQVAPDISVSEGHYVGEQVHLTLLKSVEHVADVTVHIDP 292

GO:0006812 "cation transport" evidence=ISS

GO:0008324 "cation transmembrane transporter activity" evidence=ISS

GO:0015562 "efflux transmembrane transporter activity" evidence=ISS

TIGR_CMR|GSU_2613 GSU_2613 "cation efflux family protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 111 (44.1 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 20/56 (35%), Positives = 34/56 (60%)

Query:     9 HRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
             H +RGRR+G  + +D+ + +DP  +V  +H +   V+  I +  P V +V IHI+P
Sbjct:   230 HEIRGRRSGQYIIIDLKLDMDPEMTVKQSHDIATCVKKLIFERFPNVGDVMIHINP 285

GO:0006812 "cation transport" evidence=ISS

GO:0008324 "cation transmembrane transporter activity" evidence=ISS

GO:0015562 "efflux transmembrane transporter activity" evidence=ISS

UNIPROTKB|Q4K5J6 fieF "Cation diffusion facilitator family transporter FieF" [Pseudomonas protegens Pf-5 (taxid:220664)]

 Score = 104 (41.7 bits), Expect = 3.3e-05, P = 3.3e-05
 Identities = 20/58 (34%), Positives = 34/58 (58%)

Query:     7 GCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
             G H LR R +GS  ++ +H+ +    ++S AHG+ +     I K++P  +EV +H DP
Sbjct:   232 GAHDLRTRISGSHWFVQLHLELPGELTLSVAHGISDQAADAIQKAYPR-AEVLVHADP 288

GO:0005506 "iron ion binding" evidence=ISS

GO:0006826 "iron ion transport" evidence=ISS

GO:0008324 "cation transmembrane transporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

TIGR_CMR|CHY_0502 CHY_0502 "cation efflux family protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 103 (41.3 bits), Expect = 4.4e-05, P = 4.4e-05
 Identities = 20/56 (35%), Positives = 32/56 (57%)

Query:     9 HRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
             H+LR R++GS  ++D+H+VV    SV   H +   +  +I +  P  S V IH +P
Sbjct:   230 HKLRARKSGSERFIDLHLVVPEKLSVKEVHDLCNKIEREIEEKLPN-SHVLIHAEP 284

GO:0006812 "cation transport" evidence=ISS

GO:0008324 "cation transmembrane transporter activity" evidence=ISS

GO:0015562 "efflux transmembrane transporter activity" evidence=ISS

TIGR_CMR|DET_0331 DET_0331 "cation efflux family protein" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 101 (40.6 bits), Expect = 0.00031, P = 0.00031
 Identities = 25/81 (30%), Positives = 43/81 (53%)

Query:     9 HRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAYFQ 68
             H LR R+AGS  Y+D+H+V+    SV  AH + +++   + K   ++  V IH++P   +
Sbjct:   230 HNLRTRKAGSYRYVDLHLVMPKTLSVEKAHSICDHLEKDL-KDKLKIDYVTIHVEPCTEE 288

Query:    69 FSPSTMDQLGLEGCKAHSSNI 89
               P    Q+    CK   S++
Sbjct:   289 NCPEC--QIN---CKKRPSDL 304


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.135   0.400    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      141       141   0.00091  102 3  11 22  0.42    31
                                                     30  0.47    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  564 (60 KB)
  Total size of DFA:  130 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.55u 0.17s 13.72t   Elapsed:  00:00:01
  Total cpu time:  13.55u 0.17s 13.72t   Elapsed:  00:00:01
  Start:  Sat May 11 05:03:28 2013   End:  Sat May 11 05:03:29 2013

GO:0006812 "cation transport" evidence=ISS

GO:0008324 "cation transmembrane transporter activity" evidence=ISS

GO:0015562 "efflux transmembrane transporter activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q10LJ2	MTP2_ORYSJ	No assigned EC number	0.7586	0.4113	0.1491	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	141
COG0053	304	COG0053, MMT1, Predicted Co/Zn/Cd cation transport	3e-13
TIGR01297	268	TIGR01297, CDF, cation diffusion facilitator famil	2e-11
pfam01545	273	pfam01545, Cation_efflux, Cation efflux family	4e-10
PRK09509	299	PRK09509, fieF, ferrous iron efflux protein F; Rev	0.002

>gnl|CDD|223131 COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]

 Score = 64.6 bits (158), Expect = 3e-13
 Identities = 26/60 (43%), Positives = 41/60 (68%)

Query: 6   QGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPA 65
           +G H LR R++GS +++DVHI VDP  S+  AH + + V  +I K  P+V++V IH++P 
Sbjct: 231 KGVHDLRTRKSGSRIFIDVHIEVDPDLSLEEAHEIADEVEKRIKKEFPKVADVTIHVEPL 290

Length = 304

>gnl|CDD|233348 TIGR01297, CDF, cation diffusion facilitator family transporter

 Score = 59.5 bits (145), Expect = 2e-11
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 6   QGCHRLRGRRAGSS-LYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
           +G H L   R G   L+LDVH+VVDP   +  AH +   +  +I K HP +  V I ++P
Sbjct: 208 KGVHDLHIWRIGPGKLFLDVHVVVDPDLDLKQAHDIALEIEREILKRHPGIEHVTIQVEP 267

Query: 65  A 65
            
Sbjct: 268 C 268

This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence [Transport and binding proteins, Cations and iron carrying compounds]. Length = 268

>gnl|CDD|216561 pfam01545, Cation_efflux, Cation efflux family

 Score = 55.8 bits (135), Expect = 4e-10
 Identities = 20/60 (33%), Positives = 36/60 (60%)

Query: 7   GCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAY 66
           G H LR  ++G   ++D+HI VDP  +V  AH + + +   + +  P +++V IH++PA 
Sbjct: 211 GVHDLRVWKSGPKYFVDIHIEVDPDLTVEEAHEIADEIERALKEKFPGIADVTIHVEPAP 270

Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt. These proteins are thought to be efflux pumps that remove these ions from cells. Length = 273

>gnl|CDD|181919 PRK09509, fieF, ferrous iron efflux protein F; Reviewed

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 6   QGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
            G H LR R++G + ++ +H+ ++    +  AH + + V   + +  P  S+V IH DP
Sbjct: 229 SGAHDLRTRQSGPTRFIQLHLEMEDNLPLVQAHMIADQVEQALLRRFPG-SDVIIHQDP 286

Length = 299

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	141
COG0053	304	MMT1 Predicted Co/Zn/Cd cation transporters [Inorg	99.53
TIGR01297	268	CDF cation diffusion facilitator family transporte	99.44
PRK09509	299	fieF ferrous iron efflux protein F; Reviewed	99.43
PF01545	284	Cation_efflux: Cation efflux family; InterPro: IPR	99.27
PRK03557	312	zinc transporter ZitB; Provisional	99.16
KOG1485	412	consensus Mitochondrial Fe2+ transporter MMT1 and	98.04
COG1230	296	CzcD Co/Zn/Cd efflux system component [Inorganic i	97.46
KOG1482	379	consensus Zn2+ transporter [Inorganic ion transpor	96.95
KOG1483	404	consensus Zn2+ transporter ZNT1 and related Cd2+/Z	95.3
PRK09509	299	fieF ferrous iron efflux protein F; Reviewed	93.88
COG0053	304	MMT1 Predicted Co/Zn/Cd cation transporters [Inorg	93.32
TIGR01297	268	CDF cation diffusion facilitator family transporte	93.02
PF14535	96	AMP-binding_C_2: AMP-binding enzyme C-terminal dom	90.65
PF01545	284	Cation_efflux: Cation efflux family; InterPro: IPR	89.09
PRK03557	312	zinc transporter ZitB; Provisional	88.17
PF03780	108	Asp23: Asp23 family; InterPro: IPR005531 This entr	82.71
PF09580	177	Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ	82.15
TIGR02898	158	spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ	80.68

>COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]

Probab=99.53  E-value=3.7e-14  Score=115.65  Aligned_cols=69  Identities=38%  Similarity=0.655  Sum_probs=65.9

Q ss_pred             CCCceeeeeEEEEeeCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCeeEEEEEEeeCCCCCC
Q 032430            2 SLSLQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAYFQFS   70 (141)
Q Consensus         2 ~~gV~~vh~lr~R~~G~~~~vd~hI~V~~~lsv~eah~I~~~ve~~l~~~~p~v~dv~VhidP~~~~~~   70 (141)
                      .|||.++|++|+|+.|+.+++|+|++|+++||+.|+|+|+++++++|++.+|.+.+++||+||......
T Consensus       227 ~~~V~~v~~lr~R~~G~~~~id~~i~v~~~ls~~eah~I~~~ie~~i~~~~~~~~~v~IhveP~~~~~~  295 (304)
T COG0053         227 VPGVKGVHDLRTRKSGSRIFIDVHIEVDPDLSLEEAHEIADEVEKRIKKEFPKVADVTIHVEPLGEKEE  295 (304)
T ss_pred             CCcceeeecceeeeeCCeEEEEEEEEECCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEecCCccccc
Confidence            589999999999999999999999999999999999999999999999999988999999999987655

>TIGR01297 CDF cation diffusion facilitator family transporter

Probab=99.44  E-value=4e-13  Score=106.24  Aligned_cols=64  Identities=36%  Similarity=0.648  Sum_probs=61.8

Q ss_pred             CCCceeeeeEEEEeeCC-EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCeeEEEEEEeeC
Q 032430            2 SLSLQGCHRLRGRRAGS-SLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPA   65 (141)
Q Consensus         2 ~~gV~~vh~lr~R~~G~-~~~vd~hI~V~~~lsv~eah~I~~~ve~~l~~~~p~v~dv~VhidP~   65 (141)
                      .|||.++|++|+|+.|+ .+++++|+.+++++|+.|+|++++++++++++++|++.+++||+||+
T Consensus       204 ~~~v~~v~~~~~~~~G~~~~~v~~~v~v~~~~~~~~ah~i~~~i~~~i~~~~~~v~~v~ih~ep~  268 (268)
T TIGR01297       204 IPGVKGVHDLHIWRIGPGKLFLDVHVVVDPDLDLKQAHDIALEIEREILKRHPGIEHVTIQVEPC  268 (268)
T ss_pred             CCCcccceEeEEEEcCCCCEEEEEEEEECCCCChhHHHHHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            58999999999999999 99999999999999999999999999999999999999999999994

This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.

>PRK09509 fieF ferrous iron efflux protein F; Reviewed

Probab=99.43  E-value=6.8e-13  Score=107.48  Aligned_cols=65  Identities=26%  Similarity=0.528  Sum_probs=61.9

Q ss_pred             CCCceeeeeEEEEeeCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCeeEEEEEEeeCCC
Q 032430            2 SLSLQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAYF   67 (141)
Q Consensus         2 ~~gV~~vh~lr~R~~G~~~~vd~hI~V~~~lsv~eah~I~~~ve~~l~~~~p~v~dv~VhidP~~~   67 (141)
                      +|||.++|++|+|++|+..++++||.|++++|+.|+|+|+++++++|++++|. .+++||+||++.
T Consensus       225 ~~~v~~v~~l~~~~~G~~~~v~v~i~v~~~~~~~e~h~i~~~ie~~l~~~~~~-~~v~ihveP~~~  289 (299)
T PRK09509        225 WPGVSGAHDLRTRQSGPTRFIQLHLEMEDNLPLVQAHMIADQVEQALLRRFPG-SDVIIHQDPCSV  289 (299)
T ss_pred             CCCCcCceeeeeEeeCCeEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHhCCC-CEEEEEeCCCCC
Confidence            68999999999999999999999999999999999999999999999999997 679999999764

>PF01545 Cation_efflux: Cation efflux family; InterPro: IPR002524 Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt

Probab=99.27  E-value=3.6e-11  Score=95.53  Aligned_cols=66  Identities=29%  Similarity=0.489  Sum_probs=62.6

Q ss_pred             CCCceeeeeEEEEeeCC-EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCeeEEEEEEeeCCC
Q 032430            2 SLSLQGCHRLRGRRAGS-SLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAYF   67 (141)
Q Consensus         2 ~~gV~~vh~lr~R~~G~-~~~vd~hI~V~~~lsv~eah~I~~~ve~~l~~~~p~v~dv~VhidP~~~   67 (141)
                      .|||.++|++|+|+.|+ .+++++|+.+++++|++|+|++.+++++.+++++|++.+++||++|+..
T Consensus       217 ~~~v~~v~~~~~~~~g~~~~~v~i~v~v~~~~~v~~~~~i~~~i~~~l~~~~~~i~~v~I~~~p~~~  283 (284)
T PF01545_consen  217 VPGVIEVHDLRVWQVGRNKYVVEIHVQVDPDMSVEEAHEIRERIEKRLREKFPGIYDVTIHIEPDEE  283 (284)
T ss_dssp             TSS-SEEEEEEEEEETT-EEEEEEEEEETTTSBHHHHHHHHHHHHHHHHHHSTTCEEEEEEEEECGG
T ss_pred             CCceEeccceEEEEecCCcEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCcEEEEEEEEecCC
Confidence            58999999999999999 9999999999999999999999999999999999999999999999864

These proteins are considered to be efflux pumps that remove these ions from cells [, ], however others are implicated in ion uptake []. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.; GO: 0008324 cation transmembrane transporter activity, 0006812 cation transport, 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3BYP_B 3BYR_A 3H90_B 2QFI_B 2ZZT_A.

>PRK03557 zinc transporter ZitB; Provisional

Probab=99.16  E-value=1.7e-10  Score=94.26  Aligned_cols=62  Identities=10%  Similarity=0.158  Sum_probs=57.4

Q ss_pred             CCCceeeeeEEEEeeCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCeeEEEEEEeeCCC
Q 032430            2 SLSLQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAYF   67 (141)
Q Consensus         2 ~~gV~~vh~lr~R~~G~~~~vd~hI~V~~~lsv~eah~I~~~ve~~l~~~~p~v~dv~VhidP~~~   67 (141)
                      +|||.++|++|+|++|+.+++|+|+.+++++   ++|+|+++++++|+++++ +.+++||+||...
T Consensus       233 ~~gV~~vh~l~~~~~G~~~~v~~hv~v~~~~---~~~~i~~~i~~~l~~~~~-i~~vtIh~e~~~~  294 (312)
T PRK03557        233 IPEVRNVHHVHVWMVGEKPVMTLHVQVIPPH---DHDALLDRIQDYLMHHYQ-IEHATIQMEYQPC  294 (312)
T ss_pred             CCCceeEEEEEEEEeCCeEEEEEEEEECCCC---CHHHHHHHHHHHHHHhCC-CCEEEEEeccCcC
Confidence            6999999999999999999999999999886   679999999999999986 7999999999753

>KOG1485 consensus Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]

Probab=98.04  E-value=1.4e-05  Score=67.52  Aligned_cols=64  Identities=34%  Similarity=0.591  Sum_probs=59.5

Q ss_pred             CCceeeeeEEEEeeCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCeeEEEEEEeeCCC
Q 032430            3 LSLQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAYF   67 (141)
Q Consensus         3 ~gV~~vh~lr~R~~G~~~~vd~hI~V~~~lsv~eah~I~~~ve~~l~~~~p~v~dv~VhidP~~~   67 (141)
                      +.+.+++.+|.+..|..++|++|+.++++++++++|+|++-+++.|.. .|++..+.||+|-+..
T Consensus       339 ~~i~~idtv~~y~~g~~~~Vev~ivl~~~~~l~~ah~i~E~lq~~ie~-l~ever~fvh~d~e~~  402 (412)
T KOG1485|consen  339 KLIKHIDTVRAYTFGSHYFVEVHIVLDEDLSLSVAHDIGETLQKKIEL-LPEVERAFVHIDYEFL  402 (412)
T ss_pred             CccccceeeeeecccceEEEEEeeecCCCCccHHHHHHHHHHHHHHhh-cchheeeeeecCcccc
Confidence            367889999999999999999999999999999999999999999975 9999999999997665

>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]

Probab=97.46  E-value=0.00042  Score=56.71  Aligned_cols=61  Identities=18%  Similarity=0.268  Sum_probs=52.7

Q ss_pred             CCCceeeeeEEEEee-CCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCeeEEEEEEeeCC
Q 032430            2 SLSLQGCHRLRGRRA-GSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAY   66 (141)
Q Consensus         2 ~~gV~~vh~lr~R~~-G~~~~vd~hI~V~~~lsv~eah~I~~~ve~~l~~~~p~v~dv~VhidP~~   66 (141)
                      .|||.++|++++|.. ++.....+|+.+++...-++   +.+.+++.+.++|. +.++||++|+..
T Consensus       234 ~~~v~~vhdlHvWsi~~~~~~~t~Hv~v~~~~~~~~---~~~~~~~~l~~~~~-I~hvTiQ~e~~~  295 (296)
T COG1230         234 IPGVASVHDLHVWSITGGEHALTLHVVVDEVADADA---ALDQIVRRLLEKYG-IEHVTIQLETEG  295 (296)
T ss_pred             CCCccceeecccCCCCCCceeEEEEEEecCccchHH---HHHHHHHHHhhhcC-cceEEEEecCCC
Confidence            699999999999999 66999999999996655555   88999999988886 899999998753

>KOG1482 consensus Zn2+ transporter [Inorganic ion transport and metabolism]

Probab=96.95  E-value=0.0035  Score=52.64  Aligned_cols=64  Identities=23%  Similarity=0.298  Sum_probs=55.8

Q ss_pred             CCCceeeeeEEEEeeCC-EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCeeEEEEEEeeCCCCC
Q 032430            2 SLSLQGCHRLRGRRAGS-SLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAYFQF   69 (141)
Q Consensus         2 ~~gV~~vh~lr~R~~G~-~~~vd~hI~V~~~lsv~eah~I~~~ve~~l~~~~p~v~dv~VhidP~~~~~   69 (141)
                      ++||..||+|++|...- +..+.+||.+++   -+++..|-+++.+.|+++|. +.++||++||.....
T Consensus       306 iegV~~VHdLhIWsiTv~k~~ls~Hv~i~~---~ad~~~vL~~~~~~i~~~~~-~~~vTiQie~~~~~~  370 (379)
T KOG1482|consen  306 IEGVKAVHDLHIWSITVGKVALSVHLAIDS---EADAEEVLDEARSLIKRRYG-ISHVTIQIEPYTEEM  370 (379)
T ss_pred             hcceeEEEEEEEEEEecCceEEEEEEeecC---CCCHHHHHHHHHHHHHhhcc-eEEEEEEecCCccch
Confidence            58999999999999954 888999999995   46777888999999999997 799999999987643

>KOG1483 consensus Zn2+ transporter ZNT1 and related Cd2+/Zn2+ transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]

Probab=95.30  E-value=0.073  Score=45.12  Aligned_cols=57  Identities=18%  Similarity=0.272  Sum_probs=46.1

Q ss_pred             CCCceeeeeEEEEee-CCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCeeEEEEEEe
Q 032430            2 SLSLQGCHRLRGRRA-GSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHID   63 (141)
Q Consensus         2 ~~gV~~vh~lr~R~~-G~~~~vd~hI~V~~~lsv~eah~I~~~ve~~l~~~~p~v~dv~Vhid   63 (141)
                      +|||..||++.+|+. |.++...+||++.--   .+--++++.|+.-.++ ++ |..+||+.|
T Consensus       311 ~~gv~~vh~lhvWqL~~~r~IAt~Hi~~~~p---~~~~~~a~~ir~~fh~-~G-Ihs~TiqPe  368 (404)
T KOG1483|consen  311 VPGVISVHDLHVWQLAGSRIIATIHIQIQNP---KEYMKIAEKIRSYFHD-QG-IHSTTIQPE  368 (404)
T ss_pred             CcceeeeeeeeeeeeccceEEEEEEEEecCc---HHHHHHHHHHHHHHHh-cC-Ccceeeccc
Confidence            799999999999999 889999999999652   2333899999888875 55 788887554

>PRK09509 fieF ferrous iron efflux protein F; Reviewed

Probab=93.88  E-value=0.12  Score=41.76  Aligned_cols=45  Identities=7%  Similarity=0.246  Sum_probs=38.7

Q ss_pred             hHHHHHHHHhcccCCCCcccccEEEEEeCCeEEEEEEEEcCCCCcC
Q 032430           95 DIDAVVYNTLSTKFPEKMGVERITHHLLHGKILLEVEVSMSPDTSI  140 (141)
Q Consensus        95 ~i~~~l~~~~~~~~~~~~~v~~v~lhy~~~~~~v~v~~~~~~~~~i  140 (141)
                      +..++++..+.+ +|...+++++..++.+.+..+++++.+++++++
T Consensus       213 ~~~~~I~~~i~~-~~~v~~v~~l~~~~~G~~~~v~v~i~v~~~~~~  257 (299)
T PRK09509        213 EERQEIIDIVTS-WPGVSGAHDLRTRQSGPTRFIQLHLEMEDNLPL  257 (299)
T ss_pred             HHHHHHHHHHHh-CCCCcCceeeeeEeeCCeEEEEEEEEECCCCCH
Confidence            455677777766 788889999999999999999999999999985

>COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]

Probab=93.32  E-value=0.2  Score=41.05  Aligned_cols=44  Identities=18%  Similarity=0.335  Sum_probs=36.4

Q ss_pred             HHHHHHHHhcccCCCCcccccEEEEEeCCeEEEEEEEEcCCCCcC
Q 032430           96 IDAVVYNTLSTKFPEKMGVERITHHLLHGKILLEVEVSMSPDTSI  140 (141)
Q Consensus        96 i~~~l~~~~~~~~~~~~~v~~v~lhy~~~~~~v~v~~~~~~~~~i  140 (141)
                      ..+.++.++.+ .|....+|++..++.+++++++++++++++|++
T Consensus       216 ~~~~i~~~i~~-~~~V~~v~~lr~R~~G~~~~id~~i~v~~~ls~  259 (304)
T COG0053         216 DLEKIRAIILS-VPGVKGVHDLRTRKSGSRIFIDVHIEVDPDLSL  259 (304)
T ss_pred             HHHHHHHHHhc-CCcceeeecceeeeeCCeEEEEEEEEECCCCCh
Confidence            44445555554 567789999999999999999999999999986

>TIGR01297 CDF cation diffusion facilitator family transporter

Probab=93.02  E-value=0.2  Score=39.40  Aligned_cols=42  Identities=21%  Similarity=0.434  Sum_probs=34.5

Q ss_pred             HHHHHhcccCCCCcccccEEEEEeCC-eEEEEEEEEcCCCCcCC
Q 032430           99 VVYNTLSTKFPEKMGVERITHHLLHG-KILLEVEVSMSPDTSIR  141 (141)
Q Consensus        99 ~l~~~~~~~~~~~~~v~~v~lhy~~~-~~~v~v~~~~~~~~~i~  141 (141)
                      ++++.+.+ .|...+++++.+++.++ +..+++++.+|++++++
T Consensus       196 ~i~~~i~~-~~~v~~v~~~~~~~~G~~~~~v~~~v~v~~~~~~~  238 (268)
T TIGR01297       196 EIKKAILS-IPGVKGVHDLHIWRIGPGKLFLDVHVVVDPDLDLK  238 (268)
T ss_pred             HHHHHHhc-CCCcccceEeEEEEcCCCCEEEEEEEEECCCCChh
Confidence            34444444 67778999999999998 99999999999999863

This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.

>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B

Probab=90.65  E-value=3.7  Score=27.55  Aligned_cols=62  Identities=15%  Similarity=0.137  Sum_probs=51.1

Q ss_pred             CCCceeeeeEEEEeeCCEEEEEEEEEECCCCC--HHHHHHHHHHHHHHHHhhCCCeeEEEEEEeeC
Q 032430            2 SLSLQGCHRLRGRRAGSSLYLDVHIVVDPFSS--VSAAHGVGENVRHQIHKSHPEVSEVFIHIDPA   65 (141)
Q Consensus         2 ~~gV~~vh~lr~R~~G~~~~vd~hI~V~~~ls--v~eah~I~~~ve~~l~~~~p~v~dv~VhidP~   65 (141)
                      +||+..-..+.+.+.|+.=.+.+.+++.+..+  ..+..+++++++++|+..+. + .+.|++-|.
T Consensus        16 ~~~~~~~y~i~v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lg-v-~~~V~lv~~   79 (96)
T PF14535_consen   16 FPEVSPEYQIVVTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLG-V-RPEVELVPP   79 (96)
T ss_dssp             STTEEEEEEEEEEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHS-S--EEEEEE-T
T ss_pred             CcCCCCcEEEEEEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcC-c-eEEEEEECC
Confidence            68888889999999999989999999999874  57888999999999999887 3 466666654

>PF01545 Cation_efflux: Cation efflux family; InterPro: IPR002524 Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt

Probab=89.09  E-value=0.98  Score=35.60  Aligned_cols=46  Identities=17%  Similarity=0.349  Sum_probs=38.7

Q ss_pred             hhHHHHHHHHhcccCCCCcccccEEEEEeCC-eEEEEEEEEcCCCCcC
Q 032430           94 LDIDAVVYNTLSTKFPEKMGVERITHHLLHG-KILLEVEVSMSPDTSI  140 (141)
Q Consensus        94 ~~i~~~l~~~~~~~~~~~~~v~~v~lhy~~~-~~~v~v~~~~~~~~~i  140 (141)
                      ++..++++..+.+ .|....++++.+.+.+. +..+++++.+++++++
T Consensus       204 ~~~~~~i~~~i~~-~~~v~~v~~~~~~~~g~~~~~v~i~v~v~~~~~v  250 (284)
T PF01545_consen  204 PELVEKIRRIIES-VPGVIEVHDLRVWQVGRNKYVVEIHVQVDPDMSV  250 (284)
T ss_dssp             HHHHHHHHHHHHH-TSS-SEEEEEEEEEETT-EEEEEEEEEETTTSBH
T ss_pred             ccchhHHHHhhcc-CCceEeccceEEEEecCCcEEEEEEEEeCCCCCH
Confidence            4556777777766 77889999999999999 9999999999999875

These proteins are considered to be efflux pumps that remove these ions from cells [, ], however others are implicated in ion uptake []. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.; GO: 0008324 cation transmembrane transporter activity, 0006812 cation transport, 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3BYP_B 3BYR_A 3H90_B 2QFI_B 2ZZT_A.

>PRK03557 zinc transporter ZitB; Provisional

Probab=88.17  E-value=1.4  Score=36.04  Aligned_cols=31  Identities=19%  Similarity=0.359  Sum_probs=28.6

Q ss_pred             CCCCcccccEEEEEeCCeEEEEEEEEcCCCC
Q 032430          108 FPEKMGVERITHHLLHGKILLEVEVSMSPDT  138 (141)
Q Consensus       108 ~~~~~~v~~v~lhy~~~~~~v~v~~~~~~~~  138 (141)
                      +|....+|++.+.+.+++..+++++.+++++
T Consensus       233 ~~gV~~vh~l~~~~~G~~~~v~~hv~v~~~~  263 (312)
T PRK03557        233 IPEVRNVHHVHVWMVGEKPVMTLHVQVIPPH  263 (312)
T ss_pred             CCCceeEEEEEEEEeCCeEEEEEEEEECCCC
Confidence            7788999999999999999999999998775

>PF03780 Asp23: Asp23 family; InterPro: IPR005531 This entry represents the alkaline shock protein 23 family

Probab=82.71  E-value=12  Score=25.16  Aligned_cols=53  Identities=23%  Similarity=0.410  Sum_probs=37.8

Q ss_pred             EEEEee-CCEEEEEEEEEECCCCCHHHH-HHHHHHHHHHHHhhCC-CeeEEEEEEe
Q 032430           11 LRGRRA-GSSLYLDVHIVVDPFSSVSAA-HGVGENVRHQIHKSHP-EVSEVFIHID   63 (141)
Q Consensus        11 lr~R~~-G~~~~vd~hI~V~~~lsv~ea-h~I~~~ve~~l~~~~p-~v~dv~Vhid   63 (141)
                      ++++.. ++.+.+++++.+....++.+. .++-+++++.|..-.+ .+.+|.|++.
T Consensus        50 v~v~~~~~~~i~v~l~v~v~~g~~i~~v~~~iq~~V~~~v~~~tg~~v~~V~V~V~  105 (108)
T PF03780_consen   50 VKVEVDEDGGITVDLHVVVEYGVNIPEVAEEIQEKVKEAVEEMTGIEVSEVNVHVE  105 (108)
T ss_pred             eEEEEccCcceEEEEEEEEECCccHHHHHHHHHHHHHHHHHHHHCCeeEEEEEEEE
Confidence            567766 899999999999999988764 3466666666654322 2456667664

These small proteins are involved in alkaline pH tolerance of Staphylococcus aureus [,].

>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis

Probab=82.15  E-value=4.5  Score=29.96  Aligned_cols=58  Identities=14%  Similarity=0.287  Sum_probs=46.7

Q ss_pred             CceeeeeEEEEeeCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCeeEEEEEEeeC
Q 032430            4 SLQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPA   65 (141)
Q Consensus         4 gV~~vh~lr~R~~G~~~~vd~hI~V~~~lsv~eah~I~~~ve~~l~~~~p~v~dv~VhidP~   65 (141)
                      .+.+|.+..+--+|..++|=+.+. ..   -.....|...|+++++..+|.+.+|.|..||.
T Consensus        86 ~~~~V~~A~vvv~~~~a~Vav~~~-~~---~~~~~~i~~~V~~~v~~~~p~~~~V~Vs~D~~  143 (177)
T PF09580_consen   86 KVPGVEDATVVVTDDNAYVAVDLD-FN---RFNTKKIKKKVEKAVKSADPRIYNVYVSTDPD  143 (177)
T ss_pred             cCCCceEEEEEEECCEEEEEEEec-cc---ccchhHHHHHHHHHHHHhCCCccEEEEEcCHH
Confidence            455677778888899999988887 32   34556899999999999999989999988875

Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.

>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family

Probab=80.68  E-value=8.1  Score=28.89  Aligned_cols=61  Identities=16%  Similarity=0.268  Sum_probs=49.7

Q ss_pred             CceeeeeEEEEeeCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCeeEEEEEEeeCC
Q 032430            4 SLQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAY   66 (141)
Q Consensus         4 gV~~vh~lr~R~~G~~~~vd~hI~V~~~lsv~eah~I~~~ve~~l~~~~p~v~dv~VhidP~~   66 (141)
                      .+-+|.+..+--+|...+|=+  .++.+.--+.+.+|...|++++++..|.+.+|.|-.+|.-
T Consensus        65 ~v~~V~dA~vvVtg~~A~Vgv--~~~~~~~~~~~~~iK~~Va~~Vk~~dp~~~~VyVsaDpd~  125 (158)
T TIGR02898        65 KVKGVKDATVVITGNYAYVGV--DLTNGLEGSVTDELKEKVAETVKSTDNRIANVYVSADPDT  125 (158)
T ss_pred             cCCCCceEEEEEECCEEEEEE--EcCCCcchhhHHHHHHHHHHHHHhhCCCcceEEEEcCHHH
Confidence            455677778888999888765  5566666777899999999999998999999999888753

YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	141
3j1z_P	306	Inward-facing Conformation Of The Zinc Transporter		2e-04
2zzt_A	107	Crystal Structure Of The Cytosolic Domain Of The Ca		3e-04

>pdb|3J1Z|P Chain P, Inward-facing Conformation Of The Zinc Transporter Yiip Revealed By Cryo-electron Microscopy Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 7   GCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAY 66
           G H LR R+AG ++++  H+ +D   S++ AH + +    ++ K+  E +EV IH DP  
Sbjct: 232 GLHDLRTRQAGKTVFIQFHLELDGNLSLNEAHSITDTTGLRV-KAAFEDAEVIIHQDPV- 289
Query: 67  FQFSPST 73
            Q  P+T
Sbjct: 290 -QVEPTT 295

>pdb|2ZZT|A Chain A, Crystal Structure Of The Cytosolic Domain Of The Cation Diffusion Facilitator Family Protein Length = 107

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 9  HRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
          HR+R RR G+  +++  I VD   SV  AH +   +R +  K   ++ +V IH++P
Sbjct: 29 HRVRIRRVGTKYFIEXDIEVDGKXSVKDAHELTVKIRKEXLKRRDDIEDVTIHVEP 84

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	141
2zzt_A	107	Putative uncharacterized protein; cation diffusion	2e-18
3byp_A	94	CZRB protein; membrane protein, zinc transporter,	2e-16
3h90_A	283	Ferrous-iron efflux pump FIEF; membrane protein, z	7e-15

>2zzt_A Putative uncharacterized protein; cation diffusion facilitator (CDF), transporter, zinc, membrane protein, cytosolic domain; 2.84A {Thermotoga maritima} Length = 107

 Score = 74.0 bits (182), Expect = 2e-18
 Identities = 19/61 (31%), Positives = 34/61 (55%)

Query: 6  QGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPA 65
             HR+R RR G+  ++++ I VD   SV  AH +   +R ++ K   ++ +V IH++P 
Sbjct: 26 HNPHRVRIRRVGTKYFIEMDIEVDGKMSVKDAHELTVKIRKEMLKRRDDIEDVTIHVEPL 85

Query: 66 Y 66
           
Sbjct: 86 G 86

>3byp_A CZRB protein; membrane protein, zinc transporter, transport protein; 1.70A {Thermus thermophilus} SCOP: d.52.9.1 PDB: 3byr_A Length = 94

 Score = 68.5 bits (168), Expect = 2e-16
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 7  GCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPA 65
            H L+ RRAG   +L+ H+VV   + V  AH + + +   + ++ P + +  IH++P 
Sbjct: 29 EVHDLKTRRAGPRSFLEFHLVVRGDTPVEEAHRLCDELERALAQAFPGL-QATIHVEPE 86

>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A Length = 283

 Score = 68.4 bits (168), Expect = 7e-15
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 7   GCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPA 65
           G H LR R++G + ++ +H+ ++    +  AH V + V   I +  P   +V IH DP 
Sbjct: 223 GAHDLRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPGS-DVIIHQDPC 280

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	141
2zzt_A	107	Putative uncharacterized protein; cation diffusion	99.7
3byp_A	94	CZRB protein; membrane protein, zinc transporter,	99.68
3j1z_P	306	YIIP, cation efflux family protein; zinc transport	99.53
3h90_A	283	Ferrous-iron efflux pump FIEF; membrane protein, z	99.51
3byp_A	94	CZRB protein; membrane protein, zinc transporter,	96.2
2zzt_A	107	Putative uncharacterized protein; cation diffusion	95.93
3h90_A	283	Ferrous-iron efflux pump FIEF; membrane protein, z	93.12
3j1z_P	306	YIIP, cation efflux family protein; zinc transport	93.11

>2zzt_A Putative uncharacterized protein; cation diffusion facilitator (CDF), transporter, zinc, membrane protein, cytosolic domain; 2.84A {Thermotoga maritima}

Probab=99.70  E-value=1.1e-16  Score=110.93  Aligned_cols=66  Identities=29%  Similarity=0.477  Sum_probs=62.6

Q ss_pred             CCCceeeeeEEEEeeCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCeeEEEEEEeeCCC
Q 032430            2 SLSLQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAYF   67 (141)
Q Consensus         2 ~~gV~~vh~lr~R~~G~~~~vd~hI~V~~~lsv~eah~I~~~ve~~l~~~~p~v~dv~VhidP~~~   67 (141)
                      +|||.+||+||+|++|+.+++++||.|++++|+.++|+|+++|+++|+++||.+.+++||+||...
T Consensus        22 ~~gV~~vh~lr~r~~G~~~~v~~hI~v~~~~sv~eah~i~~~ie~~L~~~~~~i~~vtIhvEp~~~   87 (107)
T 2zzt_A           22 FPNVHNPHRVRIRRVGTKYFIEMDIEVDGKMSVKDAHELTVKIRKEMLKRRDDIEDVTIHVEPLGN   87 (107)
T ss_dssp             CSSCEEEEEEEEECSCC-CEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHCTTCCEEEEEEEETTC
T ss_pred             CCCccccEEEEEEEECCcEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEEEecCCC
Confidence            699999999999999999999999999999999999999999999999999988999999999765

>3byp_A CZRB protein; membrane protein, zinc transporter, transport protein; 1.70A {Thermus thermophilus} SCOP: d.52.9.1 PDB: 3byr_A

Probab=99.68  E-value=3.3e-16  Score=105.40  Aligned_cols=64  Identities=27%  Similarity=0.458  Sum_probs=60.5

Q ss_pred             CCceeeeeEEEEeeCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCeeEEEEEEeeCCC
Q 032430            3 LSLQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAYF   67 (141)
Q Consensus         3 ~gV~~vh~lr~R~~G~~~~vd~hI~V~~~lsv~eah~I~~~ve~~l~~~~p~v~dv~VhidP~~~   67 (141)
                      |||.+||+||+|++|+.+++++||.|++++|+.++|+|++++++.|+++||.+ +++||+||...
T Consensus        25 ~gV~~vh~l~~~~~g~~~~v~~hi~v~~~~~~~~~h~i~~~ie~~l~~~~~~~-~vtIh~ep~~~   88 (94)
T 3byp_A           25 GRALEVHDLKTRRAGPRSFLEFHLVVRGDTPVEEAHRLCDELERALAQAFPGL-QATIHVEPEGE   88 (94)
T ss_dssp             TTCSEEEEEEEEEETTEEEEEEEEEECTTCBHHHHHHHHHHHHHHHHHHSTTE-EEEEEEEECC-
T ss_pred             CCceeeeeEEEEEECCcEEEEEEEEECCCCcHHHHHHHHHHHHHHHHHHCCCC-EEEEEeCCCCc
Confidence            89999999999999999999999999999999999999999999999999975 99999999543

>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis}

Probab=99.53  E-value=1e-14  Score=117.26  Aligned_cols=67  Identities=27%  Similarity=0.501  Sum_probs=63.5

Q ss_pred             CCCceeeeeEEEEeeCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCeeEEEEEEeeCCCCC
Q 032430            2 SLSLQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAYFQF   69 (141)
Q Consensus         2 ~~gV~~vh~lr~R~~G~~~~vd~hI~V~~~lsv~eah~I~~~ve~~l~~~~p~v~dv~VhidP~~~~~   69 (141)
                      .|||.++|++|+|++|+++++|+||.||+++|++|+|+|++++|++|+++||. .+++||+||+..+.
T Consensus       227 ~~~V~~vh~l~~~~~G~~~~v~~hi~v~~~~sl~eah~i~~~ie~~l~~~~~~-~~v~IhveP~~~eP  293 (306)
T 3j1z_P          227 DPRVLGLHDLRTRQAGKTVFIQFHLELDGNLSLNEAHSITDTTGLRVKAAFED-AEVIIHQDPVQVEP  293 (306)
T ss_dssp             STTBCCCCCBCCEEETTEEEEEECCEECTTSBHHHHHHHHHHHHHHHHHHSTT-CEEEECCEETTSCC
T ss_pred             CCCcceeeeEEEEEECCcEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCC-CeEEEEeCCCCCCC
Confidence            58999999999999999999999999999999999999999999999999985 89999999987653

>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A

Probab=99.51  E-value=8.4e-14  Score=110.40  Aligned_cols=65  Identities=29%  Similarity=0.544  Sum_probs=62.5

Q ss_pred             CCCceeeeeEEEEeeCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCeeEEEEEEeeCCC
Q 032430            2 SLSLQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAYF   67 (141)
Q Consensus         2 ~~gV~~vh~lr~R~~G~~~~vd~hI~V~~~lsv~eah~I~~~ve~~l~~~~p~v~dv~VhidP~~~   67 (141)
                      .|||.++|++|+|++|+.+++++|+.+++++|++|+|+|+++++++|+++||. .+++||+||+++
T Consensus       218 ~~~V~~v~~l~~~~~G~~~~v~~hv~v~~~~~~~~~~~i~~~i~~~l~~~~~~-~~v~ih~ep~~~  282 (283)
T 3h90_A          218 WPGVSGAHDLRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPG-SDVIIHQDPCSV  282 (283)
T ss_dssp             SSSCSEEEEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHHHHHHHHHHSTT-CEEEEEEECSCC
T ss_pred             CCCcccceeeEEEEECCcEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCC-CeEEEEeccCCC
Confidence            58999999999999999999999999999999999999999999999999997 899999999865

>3byp_A CZRB protein; membrane protein, zinc transporter, transport protein; 1.70A {Thermus thermophilus} SCOP: d.52.9.1 PDB: 3byr_A

Probab=96.20  E-value=0.0086  Score=39.04  Aligned_cols=45  Identities=13%  Similarity=0.134  Sum_probs=37.2

Q ss_pred             hHHHHHHHHhcccC--CCCcccccEEEEEeCCeEEEEEEEEcCCCCcC
Q 032430           95 DIDAVVYNTLSTKF--PEKMGVERITHHLLHGKILLEVEVSMSPDTSI  140 (141)
Q Consensus        95 ~i~~~l~~~~~~~~--~~~~~v~~v~lhy~~~~~~v~v~~~~~~~~~i  140 (141)
                      +..+.++..+.+ +  |...++|++.+.+.++...+++++.++++|++
T Consensus        10 ~~~~~I~~~l~~-~~~~gV~~vh~l~~~~~g~~~~v~~hi~v~~~~~~   56 (94)
T 3byp_A           10 EEVERIRAFLQE-RIRGRALEVHDLKTRRAGPRSFLEFHLVVRGDTPV   56 (94)
T ss_dssp             HHHHHHHHHHHH-HHTTTCSEEEEEEEEEETTEEEEEEEEEECTTCBH
T ss_pred             HHHHHHHHHHHh-cCCCCceeeeeEEEEEECCcEEEEEEEEECCCCcH
Confidence            344556666655 6  78899999999999999999999999999874

>2zzt_A Putative uncharacterized protein; cation diffusion facilitator (CDF), transporter, zinc, membrane protein, cytosolic domain; 2.84A {Thermotoga maritima}

Probab=95.93  E-value=0.011  Score=39.93  Aligned_cols=44  Identities=16%  Similarity=0.359  Sum_probs=37.4

Q ss_pred             HHHHHHHHhcccCCCCcccccEEEEEeCCeEEEEEEEEcCCCCcC
Q 032430           96 IDAVVYNTLSTKFPEKMGVERITHHLLHGKILLEVEVSMSPDTSI  140 (141)
Q Consensus        96 i~~~l~~~~~~~~~~~~~v~~v~lhy~~~~~~v~v~~~~~~~~~i  140 (141)
                      ..+.++.++.+ +|....++++.+.+.++.+.+++++.++++||+
T Consensus        11 ~~~~I~~~l~~-~~gV~~vh~lr~r~~G~~~~v~~hI~v~~~~sv   54 (107)
T 2zzt_A           11 MYDDIFAVLER-FPNVHNPHRVRIRRVGTKYFIEMDIEVDGKMSV   54 (107)
T ss_dssp             HHHHHHHHHTT-CSSCEEEEEEEEECSCC-CEEEEEEEECTTSCH
T ss_pred             HHHHHHHHHHc-CCCccccEEEEEEEECCcEEEEEEEEECCCCCH
Confidence            55667777766 888899999999999999999999999999875

>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A

Probab=93.12  E-value=0.17  Score=39.21  Aligned_cols=45  Identities=7%  Similarity=0.243  Sum_probs=38.3

Q ss_pred             hHHHHHHHHhcccCCCCcccccEEEEEeCCeEEEEEEEEcCCCCcC
Q 032430           95 DIDAVVYNTLSTKFPEKMGVERITHHLLHGKILLEVEVSMSPDTSI  140 (141)
Q Consensus        95 ~i~~~l~~~~~~~~~~~~~v~~v~lhy~~~~~~v~v~~~~~~~~~i  140 (141)
                      +..++++..+.+ .|....+|++.+.+.+.+..+++|+.+++++++
T Consensus       206 ~~~~~i~~~i~~-~~~V~~v~~l~~~~~G~~~~v~~hv~v~~~~~~  250 (283)
T 3h90_A          206 EERQEIIDIVTS-WPGVSGAHDLRTRQSGPTRFIQIHLEMEDSLPL  250 (283)
T ss_dssp             HHHHHHHHHHHH-SSSCSEEEEEEEEEETTEEEEEEEEECCTTCBH
T ss_pred             HHHHHHHHHHhc-CCCcccceeeEEEEECCcEEEEEEEEeCCCCCH
Confidence            455566666666 788899999999999999999999999999875

>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis}

Probab=93.11  E-value=0.061  Score=42.52  Aligned_cols=45  Identities=9%  Similarity=0.211  Sum_probs=38.5

Q ss_pred             hHHHHHHHHhcccCCCCcccccEEEEEeCCeEEEEEEEEcCCCCcC
Q 032430           95 DIDAVVYNTLSTKFPEKMGVERITHHLLHGKILLEVEVSMSPDTSI  140 (141)
Q Consensus        95 ~i~~~l~~~~~~~~~~~~~v~~v~lhy~~~~~~v~v~~~~~~~~~i  140 (141)
                      +..+.++..+.+ .|...++|++.+.+.+.++.+++++.+|+++|+
T Consensus       215 ~~~~~I~~~i~~-~~~V~~vh~l~~~~~G~~~~v~~hi~v~~~~sl  259 (306)
T 3j1z_P          215 DTRQRIKLIAKE-DPRVLGLHDLRTRQAGKTVFIQFHLELDGNLSL  259 (306)
T ss_dssp             HHHHHHHHHHHH-STTBCCCCCBCCEEETTEEEEEECCEECTTSBH
T ss_pred             hHHHHHHHHHhc-CCCcceeeeEEEEEECCcEEEEEEEEECCCCCH
Confidence            345566777666 788899999999999999999999999999985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	141
d3bypa1	82	d.52.9.1 (A:6-87) Putative Zinc transporter CzrB {	6e-16
d2qfia1	82	d.52.9.1 (A:209-290) Ferrous-iron efflux pump FieF	3e-14

>d3bypa1 d.52.9.1 (A:6-87) Putative Zinc transporter CzrB {Thermus thermophilus [TaxId: 274]} Length = 82

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Cation efflux protein cytoplasmic domain-like
family: Cation efflux protein cytoplasmic domain-like
domain: Putative Zinc transporter CzrB
species: Thermus thermophilus [TaxId: 274]

 Score = 65.9 bits (161), Expect = 6e-16
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 7  GCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPA 65
            H L+ RRAG   +L+ H+VV   + V  AH + + +   + ++ P + +  IH++P 
Sbjct: 24 EVHDLKTRRAGPRSFLEFHLVVRGDTPVEEAHRLCDELERALAQAFPGL-QATIHVEPE 81

>d2qfia1 d.52.9.1 (A:209-290) Ferrous-iron efflux pump FieF (YiiP) {Escherichia coli [TaxId: 562]} Length = 82

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Cation efflux protein cytoplasmic domain-like
family: Cation efflux protein cytoplasmic domain-like
domain: Ferrous-iron efflux pump FieF (YiiP)
species: Escherichia coli [TaxId: 562]

 Score = 61.6 bits (150), Expect = 3e-14
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 6  QGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPA 65
           G H LR R++G + ++ +H+ ++    +  AH V + V   I +  P  S+V IH DP 
Sbjct: 21 SGAHDLRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFP-GSDVIIHQDPC 79

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	141
d3bypa1	82	Putative Zinc transporter CzrB {Thermus thermophil	99.81
d2qfia1	82	Ferrous-iron efflux pump FieF (YiiP) {Escherichia	99.72
d3bypa1	82	Putative Zinc transporter CzrB {Thermus thermophil	97.27
d2qfia1	82	Ferrous-iron efflux pump FieF (YiiP) {Escherichia	96.99

>d3bypa1 d.52.9.1 (A:6-87) Putative Zinc transporter CzrB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Cation efflux protein cytoplasmic domain-like
family: Cation efflux protein cytoplasmic domain-like
domain: Putative Zinc transporter CzrB
species: Thermus thermophilus [TaxId: 274]

Probab=99.81  E-value=1.2e-19  Score=119.22  Aligned_cols=61  Identities=28%  Similarity=0.526  Sum_probs=58.9

Q ss_pred             CceeeeeEEEEeeCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCeeEEEEEEeeC
Q 032430            4 SLQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPA   65 (141)
Q Consensus         4 gV~~vh~lr~R~~G~~~~vd~hI~V~~~lsv~eah~I~~~ve~~l~~~~p~v~dv~VhidP~   65 (141)
                      |+.++|+||+|++|+++|+|+||+|+++||+++||+|+++++++|++.||+ .+++||+||+
T Consensus        21 ~vv~vh~lr~r~~G~~~~vd~hi~v~~~~sv~~aH~i~~~ve~~i~~~~~~-~~v~vHveP~   81 (82)
T d3bypa1          21 RALEVHDLKTRRAGPRSFLEFHLVVRGDTPVEEAHRLCDELERALAQAFPG-LQATIHVEPE   81 (82)
T ss_dssp             TCSEEEEEEEEEETTEEEEEEEEEECTTCBHHHHHHHHHHHHHHHHHHSTT-EEEEEEEEEC
T ss_pred             CceeeeEEEeeEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCC-CEEEEEeCCC
Confidence            577999999999999999999999999999999999999999999999998 5899999997

>d2qfia1 d.52.9.1 (A:209-290) Ferrous-iron efflux pump FieF (YiiP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Cation efflux protein cytoplasmic domain-like
family: Cation efflux protein cytoplasmic domain-like
domain: Ferrous-iron efflux pump FieF (YiiP)
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=1.4e-20  Score=123.39  Aligned_cols=64  Identities=30%  Similarity=0.552  Sum_probs=62.0

Q ss_pred             CCCceeeeeEEEEeeCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCeeEEEEEEeeCC
Q 032430            2 SLSLQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAY   66 (141)
Q Consensus         2 ~~gV~~vh~lr~R~~G~~~~vd~hI~V~~~lsv~eah~I~~~ve~~l~~~~p~v~dv~VhidP~~   66 (141)
                      +|||.++|+||+|++|+.+|+|+||.|+++||+++||+|+++++++|+++||+ .+++||+||++
T Consensus        17 ~~gV~~vh~lr~r~~G~~~~vd~hi~v~~~~sv~~aH~I~~~ie~~l~~~~~~-~~v~iHveP~~   80 (82)
T d2qfia1          17 WPGVSGAHDLRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPG-SDVIIHQDPCS   80 (82)
T ss_dssp             SSSCSCBCCCCCCTTSCCBCCBSCTTSTTTCSCGGGHHHHHHHHHHTTSSSCC-SSCBCCCCCSC
T ss_pred             CCCceeeeEEEEEEeCCcEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHhCCC-CEEEEEeCCcc
Confidence            69999999999999999999999999999999999999999999999999996 69999999986

>d3bypa1 d.52.9.1 (A:6-87) Putative Zinc transporter CzrB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Cation efflux protein cytoplasmic domain-like
family: Cation efflux protein cytoplasmic domain-like
domain: Putative Zinc transporter CzrB
species: Thermus thermophilus [TaxId: 274]

Probab=97.27  E-value=0.00015  Score=45.69  Aligned_cols=44  Identities=14%  Similarity=0.109  Sum_probs=35.4

Q ss_pred             HHHHHHHHhcccCC--CCcccccEEEEEeCCeEEEEEEEEcCCCCcC
Q 032430           96 IDAVVYNTLSTKFP--EKMGVERITHHLLHGKILLEVEVSMSPDTSI  140 (141)
Q Consensus        96 i~~~l~~~~~~~~~--~~~~v~~v~lhy~~~~~~v~v~~~~~~~~~i  140 (141)
                      ..++++.++.+ .+  ...++|++..++.+.++.+++++.+|++||+
T Consensus         6 ~~~~I~~~i~~-~~~~~vv~vh~lr~r~~G~~~~vd~hi~v~~~~sv   51 (82)
T d3bypa1           6 EVERIRAFLQE-RIRGRALEVHDLKTRRAGPRSFLEFHLVVRGDTPV   51 (82)
T ss_dssp             HHHHHHHHHHH-HHTTTCSEEEEEEEEEETTEEEEEEEEEECTTCBH
T ss_pred             HHHHHHHHHHh-CCCCCceeeeEEEeeEECCEEEEEEEEEECCCCCH
Confidence            34455555544 34  4568999999999999999999999999986

>d2qfia1 d.52.9.1 (A:209-290) Ferrous-iron efflux pump FieF (YiiP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Cation efflux protein cytoplasmic domain-like
family: Cation efflux protein cytoplasmic domain-like
domain: Ferrous-iron efflux pump FieF (YiiP)
species: Escherichia coli [TaxId: 562]

Probab=96.99  E-value=2.4e-05  Score=49.37  Aligned_cols=46  Identities=7%  Similarity=0.224  Sum_probs=39.5

Q ss_pred             hHHHHHHHHhcccCCCCcccccEEEEEeCCeEEEEEEEEcCCCCcCC
Q 032430           95 DIDAVVYNTLSTKFPEKMGVERITHHLLHGKILLEVEVSMSPDTSIR  141 (141)
Q Consensus        95 ~i~~~l~~~~~~~~~~~~~v~~v~lhy~~~~~~v~v~~~~~~~~~i~  141 (141)
                      +..+.++.++.+ +|....+|++..++.++.+++++++.+|++||+.
T Consensus         5 e~~~~I~~~i~~-~~gV~~vh~lr~r~~G~~~~vd~hi~v~~~~sv~   50 (82)
T d2qfia1           5 EERQEIIDIVTS-WPGVSGAHDLRTRQSGPTRFIQIHLEMEDSLPLV   50 (82)
T ss_dssp             THHHHHHHHHTT-SSSCSCBCCCCCCTTSCCBCCBSCTTSTTTCSCG
T ss_pred             HHHHHHHHHHHc-CCCceeeeEEEEEEeCCcEEEEEEEEECCCCCHH
Confidence            345666676666 8888999999999999999999999999999973