Citrus Sinensis ID: 032451

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Protein Sequence
MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKV
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccHHcHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccHHEEEcccc
Coil and Loop (DISEMBL)
MSNIVKEAWRKYLIQLQVhplrtkaiTAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFdfgygvpfghFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVvegkpwgsVMKKVrkdypavqftswkv
Flexible Loop (DISEMBL)
MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRkdypavqftswkv
Low Complexity Region (SEG)
MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVkklqlkrllllmlFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKV
Disordered region (IsUnstruct)
***IVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFT****
Disordered Region (DISOPRED)
****VKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKV
Disordered Region (DISEMBL)
MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKV
Disordered Region (DISPRO)
*SNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKV
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	140	2.2.26 [Sep-21-2011]
Q9ZS51	190	Peroxisomal membrane prot	no	no	0.95	0.7	0.537	1e-37
Q54FR4	185	PXMP2/4 family protein 4	yes	no	0.892	0.675	0.338	1e-12
P19258	176	Protein Mpv17 OS=Mus musc	yes	no	0.921	0.732	0.293	2e-08
Q54GD8	184	PXMP2/4 family protein 3	no	no	0.892	0.679	0.305	2e-08
Q5BK62	176	Protein Mpv17 OS=Rattus n	yes	no	0.921	0.732	0.293	2e-08
Q54XX9	193	PXMP2/4 family protein 2	no	no	0.685	0.497	0.320	3e-08
Q66GV0	177	Protein Mpv17 OS=Xenopus	N/A	no	0.935	0.740	0.281	5e-08
Q07066	194	Peroxisomal membrane prot	no	no	0.978	0.706	0.272	1e-07
P39210	176	Protein Mpv17 OS=Homo sap	yes	no	0.921	0.732	0.293	1e-07
Q2KIN6	176	Protein Mpv17 OS=Bos taur	yes	no	0.921	0.732	0.278	5e-07

>sp|Q9ZS51|PMP22_ARATH Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana GN=PMP22 PE=1 SV=1

 Score =  154 bits (389), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 72/134 (53%), Positives = 101/134 (75%), Gaps = 1/134 (0%)

Query: 6   KEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGV 65
           K   ++YL QLQ HPLRTKAITAGVL+G SD ++QK+SG++K+QL+R+LL ++F  G+  
Sbjct: 8   KTTLQRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLG 67

Query: 66  PFGHFLNKFLDAIFKG-RDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMK 124
           P GHF + +LD  FKG +D ++VAKKV+LEQL  SP  + LFM Y+G+V+E  PW  V +
Sbjct: 68  PAGHFFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTPWTLVRE 127

Query: 125 KVRKDYPAVQFTSW 138
           +++K YP VQ T+W
Sbjct: 128 RIKKTYPTVQLTAW 141

May be involved in the metabolism of reactive oxygen species.
Arabidopsis thaliana (taxid: 3702)

>sp|Q54FR4|PX24D_DICDI PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 5/130 (3%)

Query: 5   VKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI----SGVKKLQLKRLLLLMLFD 60
           +K A   YL QL  +P+ TKA+T+G L   SD++ Q I       KK   KR + + +F 
Sbjct: 8   LKLAQSHYLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFG 67

Query: 61  FGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWG 120
           F    P  H+  K+LD  F  +  +    K+ ++Q++ SP  NFLF +  G ++EGK   
Sbjct: 68  FAVTGPLFHYWFKYLDKHFPKKSYRHAFIKLTIDQVVCSPVFNFLFFSGMG-ILEGKSKD 126

Query: 121 SVMKKVRKDY 130
            +++K++KD+
Sbjct: 127 DIVEKLKKDW 136

Dictyostelium discoideum (taxid: 44689)

>sp|P19258|MPV17_MOUSE Protein Mpv17 OS=Mus musculus GN=Mpv17 PE=2 SV=1

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 4/133 (3%)

Query: 9   WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI---SGVKKLQLKRLLLLMLFDFGYGV 65
           WR Y   L  HP + + +TAG L G  D I+Q++    G+++ Q  R L ++    G+  
Sbjct: 4   WRAYQRALAAHPWKVQVLTAGSLMGVGDMISQQLVERRGLQQHQAGRTLTMVSLGCGFVG 63

Query: 66  PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKK 125
           P      K LD +  G       KK+LL+Q  F+P     F+   G ++ G        K
Sbjct: 64  PVVGGWYKVLDHLIPGTTKVHALKKMLLDQGGFAPCFLGCFLPLVG-ILNGMSAQDNWAK 122

Query: 126 VRKDYPAVQFTSW 138
           +++DYP    T++
Sbjct: 123 LKRDYPDALITNY 135

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Mus musculus (taxid: 10090)

>sp|Q54GD8|PX24C_DICDI PXMP2/4 family protein 3 OS=Dictyostelium discoideum GN=DDB_G0290223 PE=3 SV=1

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 75/131 (57%), Gaps = 6/131 (4%)

Query: 12  YLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGVPFGHFL 71
           Y+ +L+  P++TKA+T+  L+  S  +AQK    KK+    ++   ++      P  H+ 
Sbjct: 17  YMKKLKSKPIQTKALTSATLSFISSVVAQKFIEKKKINWNAVVKFTVWGL-ISSPLVHYW 75

Query: 72  NKFLDAIFKG-RDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKD- 129
           +  LD +FK  +D      K++++QL+F+P+IN  F +    +++GKP  S++ K+  D 
Sbjct: 76  HIILDRLFKNIKDKYQSWGKLIVDQLVFAPFINIAFYSVLA-ILDGKP-KSILFKLYFDL 133

Query: 130 YPAVQFTSWKV 140
           +P ++  SWKV
Sbjct: 134 FPTLK-ASWKV 143

Dictyostelium discoideum (taxid: 44689)

>sp|Q5BK62|MPV17_RAT Protein Mpv17 OS=Rattus norvegicus GN=Mpv17 PE=2 SV=1

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 4/133 (3%)

Query: 9   WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI---SGVKKLQLKRLLLLMLFDFGYGV 65
           WR Y   L  HP + + +TAG L G  D I+Q++    G+++ Q  R L +     G+  
Sbjct: 4   WRAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQQHQTGRTLTMASLGCGFVG 63

Query: 66  PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKK 125
           P      + LD +  G    +  KK+LL+Q  F+P     F+   G V+ G        K
Sbjct: 64  PVVGGWYRVLDHLIPGTTKVNALKKMLLDQGGFAPCFLGCFLPLVG-VLNGMSAQDNWAK 122

Query: 126 VRKDYPAVQFTSW 138
           +++DYP    T++
Sbjct: 123 LKRDYPDALITNY 135

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Rattus norvegicus (taxid: 10116)

>sp|Q54XX9|PX24B_DICDI PXMP2/4 family protein 2 OS=Dictyostelium discoideum GN=DDB_G0278529 PE=3 SV=1

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 5   VKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKIS-------GVKKLQLKRLLLLM 57
           +++ W  YL  L  HPL TK+++ G L G  D +AQ++           KL  KR+  + 
Sbjct: 1   MRKLWGLYLGLLDNHPLVTKSLSTGFLMGTGDILAQRLEHKFKDEKSQFKLDYKRVATMS 60

Query: 58  LFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSP 100
                Y  P  H+  + LD + KG     + KK+L++QL+F+P
Sbjct: 61  TVGIFYSGPMLHYWYRSLDIMVKGEGRSVIIKKMLIDQLLFAP 103

Dictyostelium discoideum (taxid: 44689)

>sp|Q66GV0|MPV17_XENLA Protein Mpv17 OS=Xenopus laevis GN=mpv17 PE=2 SV=2

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 4/135 (2%)

Query: 9   WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI---SGVKKLQLKRLLLLMLFDFGYGV 65
           WR Y   L  HP + + +TAG L G  D I+Q++    G+K   ++R + +M   F +  
Sbjct: 5   WRAYQRLLGAHPWKVQIVTAGSLVGVGDVISQQLLERKGLKGHSIERTVKMMGIGFCFVG 64

Query: 66  PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKK 125
           P      K LD I  G       KK+LL+Q+ F+P     F++     + G     +  K
Sbjct: 65  PVVGGWYKILDRIIPGSGKPVALKKMLLDQVAFAPCFLGCFLS-IASALNGLSGEQIWGK 123

Query: 126 VRKDYPAVQFTSWKV 140
           +++DY     T++ +
Sbjct: 124 LKRDYKDALITNYYI 138

Involved in mitochondria homeostasis.

Xenopus laevis (taxid: 8355)

>sp|Q07066|PXMP2_RAT Peroxisomal membrane protein 2 OS=Rattus norvegicus GN=Pxmp2 PE=1 SV=2

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 82/147 (55%), Gaps = 10/147 (6%)

Query: 1   MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKK-----LQLKRLLL 55
           + ++ K A  +YL+ L+ +P+ TKA+++G+L+   + +AQ I   +K     L++  LL 
Sbjct: 14  LRSLPKRALAQYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLR 73

Query: 56  LMLFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGL-VV 114
            +++      P  H+L  F++         +  K++LL++L F+P   FL + +F + ++
Sbjct: 74  YLVYGLFVTGPLSHYLYLFMEYWVPPEVPWARVKRLLLDRLFFAP--TFLLLFFFVMNLL 131

Query: 115 EGKPWGSVMKKVRKDY-PAVQFTSWKV 140
           EGK     + K+R  + PA+Q  +W++
Sbjct: 132 EGKNISVFVAKMRSGFWPALQ-MNWRM 157

Seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the peroxisomal membrane.

Rattus norvegicus (taxid: 10116)

>sp|P39210|MPV17_HUMAN Protein Mpv17 OS=Homo sapiens GN=MPV17 PE=1 SV=1

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 4/133 (3%)

Query: 9   WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI---SGVKKLQLKRLLLLMLFDFGYGV 65
           WR Y   L  HP + + +TAG L G  D I+Q++    G+++ Q  R L ++    G+  
Sbjct: 4   WRAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQEHQRGRTLTMVSLGCGFVG 63

Query: 66  PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKK 125
           P      K LD    G       KK+LL+Q  F+P     F+   G  + G        K
Sbjct: 64  PVVGGWYKVLDRFIPGTTKVDALKKMLLDQGGFAPCFLGCFLPLVG-ALNGLSAQDNWAK 122

Query: 126 VRKDYPAVQFTSW 138
           +++DYP    T++
Sbjct: 123 LQRDYPDALITNY 135

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Homo sapiens (taxid: 9606)

>sp|Q2KIN6|MPV17_BOVIN Protein Mpv17 OS=Bos taurus GN=MPV17 PE=2 SV=1

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 4/133 (3%)

Query: 9   WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI---SGVKKLQLKRLLLLMLFDFGYGV 65
           WR Y   L  HP + + +TAG L G  D I+Q++    G++  Q  R L +     G+  
Sbjct: 4   WRAYQRALTAHPWKVQVLTAGSLMGLGDVISQQLVERRGLQAHQAGRTLTMASLGCGFVG 63

Query: 66  PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKK 125
           P      + LD +  G       KK+LL+Q  F+P     F+   G  + G        K
Sbjct: 64  PVVGGWYRVLDRLIPGTTKVDALKKMLLDQGGFAPCFLGCFLPLVG-TLNGLSAQDNWAK 122

Query: 126 VRKDYPAVQFTSW 138
           +++D+P    T++
Sbjct: 123 LQRDFPDALITNY 135

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	140
297800820	185	predicted protein [Arabidopsis lyrata su	0.992	0.751	0.721	2e-53
79325105	185	Peroxisomal membrane 22 kDa (Mpv17/PMP22	0.992	0.751	0.721	3e-53
225433201	185	PREDICTED: peroxisomal membrane protein	0.992	0.751	0.685	1e-51
147795757	185	hypothetical protein VITISV_012682 [Viti	0.992	0.751	0.685	1e-51
255575843	176	peroxisomal membrane protein 2, pxmp2, p	0.992	0.789	0.735	6e-50
449458842	183	PREDICTED: peroxisomal membrane protein	0.992	0.759	0.678	5e-49
449520295	183	PREDICTED: LOW QUALITY PROTEIN: peroxiso	0.992	0.759	0.678	7e-49
351727218	185	uncharacterized protein LOC100527292 [Gl	0.992	0.751	0.642	5e-47
413921703	181	hypothetical protein ZEAMMB73_715532 [Ze	1.0	0.773	0.645	1e-46
363807250	174	uncharacterized protein LOC100801717 [Gl	0.992	0.798	0.642	2e-46

>gi|297800820|ref|XP_002868294.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297314130|gb|EFH44553.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  213 bits (542), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 101/140 (72%), Positives = 118/140 (84%), Gaps = 1/140 (0%)

Query: 1   MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFD 60
           MS++ K+AWRKYLIQLQ HPLRTKAITAGVL GCSDAIAQKISGVK++Q +RLLLLML+ 
Sbjct: 1   MSDLAKDAWRKYLIQLQAHPLRTKAITAGVLTGCSDAIAQKISGVKRIQFRRLLLLMLYG 60

Query: 61  FGYGVPFGHFLNKFLDAIFKGRD-NKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPW 119
           F YG PFGHF +K +D IFKG+  N +VAKKVLLEQL  SPW NFLFM+Y+GLVVEG+PW
Sbjct: 61  FAYGGPFGHFFHKLMDTIFKGKKGNSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPW 120

Query: 120 GSVMKKVRKDYPAVQFTSWK 139
             V +KV KDYP +Q T+WK
Sbjct: 121 KLVKQKVGKDYPTIQLTAWK 140

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79325105|ref|NP_001031637.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana] gi|62321523|dbj|BAD95003.1| hypothetical protein [Arabidopsis thaliana] gi|98961831|gb|ABF59245.1| unknown protein [Arabidopsis thaliana] gi|332658013|gb|AEE83413.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana]

 Score =  213 bits (541), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/140 (72%), Positives = 118/140 (84%), Gaps = 1/140 (0%)

Query: 1   MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFD 60
           MS++ K+AWRKYLIQLQ HPLRTKAITAGVLAGCSDAIAQKISGVK++Q +RLLLLML+ 
Sbjct: 1   MSDLAKDAWRKYLIQLQAHPLRTKAITAGVLAGCSDAIAQKISGVKRIQFRRLLLLMLYG 60

Query: 61  FGYGVPFGHFLNKFLDAIFKGRD-NKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPW 119
           F YG PFGHF +K +D IFKG+  N +VAKKVLLEQL  SPW NFLFM+Y+GLVVEG+PW
Sbjct: 61  FAYGGPFGHFFHKLMDTIFKGKKGNSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPW 120

Query: 120 GSVMKKVRKDYPAVQFTSWK 139
             V  K+ KDYP +Q T+WK
Sbjct: 121 KLVKHKLGKDYPTIQLTAWK 140

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225433201|ref|XP_002285350.1| PREDICTED: peroxisomal membrane protein PMP22 [Vitis vinifera] gi|296083689|emb|CBI23678.3| unnamed protein product [Vitis vinifera]

 Score =  207 bits (527), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 96/140 (68%), Positives = 117/140 (83%), Gaps = 1/140 (0%)

Query: 1   MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFD 60
           MS+++K AWR YL+QLQ+HPLRTKAITAGVL GCSD IAQKISG+K+LQL+RL+L+ML+ 
Sbjct: 1   MSDLIKAAWRNYLLQLQLHPLRTKAITAGVLVGCSDVIAQKISGIKRLQLRRLILMMLYG 60

Query: 61  FGYGVPFGHFLNKFLDAIFKG-RDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPW 119
           F Y  PFGHFL+K +D IF+G +DN +VAKKV+LEQL  SPW N  FM Y+GLVVEG+ W
Sbjct: 61  FAYSGPFGHFLHKLMDIIFRGKKDNTTVAKKVVLEQLTSSPWNNMFFMMYYGLVVEGRGW 120

Query: 120 GSVMKKVRKDYPAVQFTSWK 139
           G V  KVRKDYP+VQ T+WK
Sbjct: 121 GLVRNKVRKDYPSVQLTAWK 140

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147795757|emb|CAN76530.1| hypothetical protein VITISV_012682 [Vitis vinifera]

 Score =  207 bits (526), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 96/140 (68%), Positives = 117/140 (83%), Gaps = 1/140 (0%)

Query: 1   MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFD 60
           MS+++K AWR YL+QLQ+HPLRTKAITAGVL GCSD IAQKISG+K+LQL+RL+L+ML+ 
Sbjct: 1   MSDLIKAAWRNYLLQLQLHPLRTKAITAGVLVGCSDVIAQKISGIKRLQLRRLILMMLYG 60

Query: 61  FGYGVPFGHFLNKFLDAIFKG-RDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPW 119
           F Y  PFGHFL+K +D IF+G +DN +VAKKV+LEQL  SPW N  FM Y+GLVVEG+ W
Sbjct: 61  FAYSGPFGHFLHKLMDIIFRGKKDNTTVAKKVVLEQLTSSPWNNMFFMMYYGLVVEGRGW 120

Query: 120 GSVMKKVRKDYPAVQFTSWK 139
           G V  KVRKDYP+VQ T+WK
Sbjct: 121 GLVKNKVRKDYPSVQLTAWK 140

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575843|ref|XP_002528819.1| peroxisomal membrane protein 2, pxmp2, putative [Ricinus communis] gi|223531731|gb|EEF33553.1| peroxisomal membrane protein 2, pxmp2, putative [Ricinus communis]

 Score =  201 bits (512), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 103/140 (73%), Positives = 120/140 (85%), Gaps = 1/140 (0%)

Query: 1   MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFD 60
           MS+  KEAWRKYLIQLQ HPLRTKAITAGVLAGCSD IAQKISGVK+LQL+RLLL+ L+ 
Sbjct: 1   MSDTAKEAWRKYLIQLQAHPLRTKAITAGVLAGCSDTIAQKISGVKRLQLRRLLLITLYG 60

Query: 61  FGYGVPFGHFLNKFLDAIFKG-RDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPW 119
           F YG PFGHFL+K +D IFKG +D+K+VAKKVLLEQL+ SPW N  FM Y+GL+VEG+PW
Sbjct: 61  FAYGGPFGHFLHKLMDGIFKGKKDSKTVAKKVLLEQLVSSPWNNMFFMMYYGLIVEGRPW 120

Query: 120 GSVMKKVRKDYPAVQFTSWK 139
           G V  KVRKDYP++Q T+WK
Sbjct: 121 GLVKGKVRKDYPSIQLTAWK 140

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449458842|ref|XP_004147155.1| PREDICTED: peroxisomal membrane protein PMP22-like [Cucumis sativus]

 Score =  198 bits (504), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 95/140 (67%), Positives = 114/140 (81%), Gaps = 1/140 (0%)

Query: 1   MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFD 60
           MS+IV EAW+ YL+QLQ +PLRTKAITAGVLAG SD++AQKISG+KKLQ +RLLLLML+ 
Sbjct: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  FGYGVPFGHFLNKFLDAIFKGRD-NKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPW 119
           F Y  PFGHFL+K +D IFKG+  N +VAKKVLLEQ+  SPW N  FM Y+GLVVEG+PW
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPW 120

Query: 120 GSVMKKVRKDYPAVQFTSWK 139
             V  KVRKDYP +Q T+W+
Sbjct: 121 SLVKAKVRKDYPTIQLTAWR 140

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449520295|ref|XP_004167169.1| PREDICTED: LOW QUALITY PROTEIN: peroxisomal membrane protein PMP22-like [Cucumis sativus]

 Score =  198 bits (503), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 95/140 (67%), Positives = 115/140 (82%), Gaps = 1/140 (0%)

Query: 1   MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFD 60
           MS+IV EAW+ YL+QLQ +PLRTKAITAGVLAG SD++AQKISG+KKLQ +RLLLLML+ 
Sbjct: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  FGYGVPFGHFLNKFLDAIFKGRD-NKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPW 119
           F Y  PFGHFL+K +D IFKG+  N +VAKKVLLEQ+  SPW  F+FM Y+GLVVEG+PW
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNXFIFMMYYGLVVEGRPW 120

Query: 120 GSVMKKVRKDYPAVQFTSWK 139
             V  KVRKDYP +Q T+W+
Sbjct: 121 SLVKAKVRKDYPTIQLTAWR 140

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727218|ref|NP_001237665.1| uncharacterized protein LOC100527292 [Glycine max] gi|255632021|gb|ACU16363.1| unknown [Glycine max]

 Score =  192 bits (487), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 90/140 (64%), Positives = 114/140 (81%), Gaps = 1/140 (0%)

Query: 1   MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFD 60
           MS+ V   ++KYL QLQ+HPLRTKAITA  LAG SDA+AQK+SG K+LQL+R+LL ML+ 
Sbjct: 1   MSDEVNSVFKKYLNQLQLHPLRTKAITAAFLAGFSDAVAQKLSGAKELQLRRVLLFMLYG 60

Query: 61  FGYGVPFGHFLNKFLDAIFKG-RDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPW 119
           F Y  PFGHFL+K +D IFKG + N +VAKKV+LEQ+  SPW NFLFM Y+GLV+EG+PW
Sbjct: 61  FAYSGPFGHFLHKLMDKIFKGEKGNDTVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPW 120

Query: 120 GSVMKKVRKDYPAVQFTSWK 139
            +V+ KV+KDYP+VQ T+WK
Sbjct: 121 STVINKVKKDYPSVQLTAWK 140

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413921703|gb|AFW61635.1| hypothetical protein ZEAMMB73_715532 [Zea mays]

 Score =  191 bits (484), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 91/141 (64%), Positives = 111/141 (78%), Gaps = 1/141 (0%)

Query: 1   MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFD 60
           MS +V  A + Y+ QLQ HPLRTKAIT+GVLAGCSDA+AQKISGV KLQL+RLLL+ L+ 
Sbjct: 1   MSEVVAMAGQAYMKQLQAHPLRTKAITSGVLAGCSDAVAQKISGVSKLQLRRLLLIALYG 60

Query: 61  FGYGVPFGHFLNKFLDAIFKGRDNK-SVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPW 119
           F Y  PFGHFL+K +D  FKG+  K + AKKVL+EQL  SPW N +FM YFGLVVEG+P+
Sbjct: 61  FAYAGPFGHFLHKLMDRFFKGKKGKETTAKKVLVEQLTASPWNNMMFMMYFGLVVEGRPF 120

Query: 120 GSVMKKVRKDYPAVQFTSWKV 140
           G V  KV+KDY +VQ T+W+V
Sbjct: 121 GQVKNKVKKDYASVQLTAWRV 141

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807250|ref|NP_001242614.1| uncharacterized protein LOC100801717 [Glycine max] gi|255640521|gb|ACU20546.1| unknown [Glycine max]

 Score =  190 bits (482), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 90/140 (64%), Positives = 113/140 (80%), Gaps = 1/140 (0%)

Query: 1   MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFD 60
           MS+ V   ++KYL QLQ+HPLRTKAITA VLAG SDA+AQK+SG KKLQL+R+LL ML+ 
Sbjct: 1   MSDEVNSVFKKYLNQLQLHPLRTKAITAAVLAGFSDAVAQKLSGAKKLQLRRVLLFMLYG 60

Query: 61  FGYGVPFGHFLNKFLDAIFKG-RDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPW 119
           F Y  PFGHFL+K +D IFKG + N +VAKKV+LEQ+  SPW NF FM Y+GLV+E +PW
Sbjct: 61  FAYSGPFGHFLHKLMDKIFKGNKGNDTVAKKVILEQITSSPWNNFFFMMYYGLVIERRPW 120

Query: 120 GSVMKKVRKDYPAVQFTSWK 139
            +V+ KV+KDYP+VQ T+WK
Sbjct: 121 STVINKVKKDYPSVQLTAWK 140

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	140
TAIR|locus:1009023385	185	AT4G14305 "AT4G14305" [Arabido	0.992	0.751	0.657	4.8e-46
TAIR|locus:2137124	190	PMP22 [Arabidopsis thaliana (t	0.95	0.7	0.492	1.1e-30
DICTYBASE|DDB_G0290631	185	DDB_G0290631 "pmp22 family pro	0.892	0.675	0.315	1.3e-11
TAIR|locus:2091767	235	AT3G24570 "AT3G24570" [Arabido	0.528	0.314	0.353	2.3e-11
DICTYBASE|DDB_G0290223	184	DDB_G0290223 "pmp22 family pro	0.892	0.679	0.290	5.2e-10
MGI|MGI:107487	194	Pxmp2 "peroxisomal membrane pr	0.978	0.706	0.258	2.2e-09
UNIPROTKB|G4N5Q6	279	MGG_05292 "Integral membrane p	0.907	0.455	0.287	2.9e-09
ASPGD|ASPL0000063859	252	AN7258 [Emericella nidulans (t	0.907	0.503	0.280	5.7e-09
UNIPROTKB|G3V9N2	194	Pxmp2 "Peroxisomal membrane pr	0.978	0.706	0.258	7.6e-09
RGD|61812	194	Pxmp2 "peroxisomal membrane pr	0.978	0.706	0.258	9.7e-09

TAIR|locus:1009023385 AT4G14305 "AT4G14305" [Arabidopsis thaliana (taxid:3702)]

 Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
 Identities = 92/140 (65%), Positives = 106/140 (75%)

Query:     1 MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVXXXXXXXXXXXXXFD 60
             MS++ K+AWRKYLIQLQ HPLRTKAITAGVLAGCSDAIAQKISGV             + 
Sbjct:     1 MSDLAKDAWRKYLIQLQAHPLRTKAITAGVLAGCSDAIAQKISGVKRIQFRRLLLLMLYG 60

Query:    61 FGYGVPFGHFLNKFLDAIFKGRD-NKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPW 119
             F YG PFGHF +K +D IFKG+  N +VAKKVLLEQL  SPW NFLFM+Y+GLVVEG+PW
Sbjct:    61 FAYGGPFGHFFHKLMDTIFKGKKGNSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPW 120

Query:   120 GSVMKKVRKDYPAVQFTSWK 139
               V  K+ KDYP +Q T+WK
Sbjct:   121 KLVKHKLGKDYPTIQLTAWK 140

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2137124 PMP22 [Arabidopsis thaliana (taxid:3702)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 66/134 (49%), Positives = 89/134 (66%)

Query:     6 KEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVXXXXXXXXXXXXXFDFGYGV 65
             K   ++YL QLQ HPLRTKAITAGVL+G SD ++QK+SG+             F  G+  
Sbjct:     8 KTTLQRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLG 67

Query:    66 PFGHFLNKFLDAIFKGR-DNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMK 124
             P GHF + +LD  FKG+ D ++VAKKV+LEQL  SP  + LFM Y+G+V+E  PW  V +
Sbjct:    68 PAGHFFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTPWTLVRE 127

Query:   125 KVRKDYPAVQFTSW 138
             +++K YP VQ T+W
Sbjct:   128 RIKKTYPTVQLTAW 141

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IDA

DICTYBASE|DDB_G0290631 DDB_G0290631 "pmp22 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 41/130 (31%), Positives = 69/130 (53%)

Query:     5 VKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQ--KISGVXXXXXXXXXXXXXFDFG 62
             +K A   YL QL  +P+ TKA+T+G L   SD++ Q  ++S                 FG
Sbjct:     8 LKLAQSHYLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFG 67

Query:    63 YGV--PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWG 120
             + V  P  H+  K+LD  F  +  +    K+ ++Q++ SP  NFLF +  G ++EGK   
Sbjct:    68 FAVTGPLFHYWFKYLDKHFPKKSYRHAFIKLTIDQVVCSPVFNFLFFSGMG-ILEGKSKD 126

Query:   121 SVMKKVRKDY 130
              +++K++KD+
Sbjct:   127 DIVEKLKKDW 136

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091767 AT3G24570 "AT3G24570" [Arabidopsis thaliana (taxid:3702)]

 Score = 101 (40.6 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
 Identities = 29/82 (35%), Positives = 43/82 (52%)

Query:    59 FDFGYGVPFGHF----LNKF--LDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGL 112
             F FG+  P GHF    L+KF  L   +  +  + VA KV ++ LIF P    +F TY G 
Sbjct:    86 FGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFVAAKVAMDGLIFGPVDLLVFFTYMGF 145

Query:   113 VVEGKPWGSVMKKVRKDY-PAV 133
                GK    V + +++D+ PA+
Sbjct:   146 AT-GKNTAEVKEGLKRDFLPAL 166

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

DICTYBASE|DDB_G0290223 DDB_G0290223 "pmp22 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 38/131 (29%), Positives = 69/131 (52%)

Query:    12 YLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVXXXXXXXXXXXXXFDFGYGVPFGHFL 71
             Y+ +L+  P++TKA+T+  L+  S  +AQK                 +      P  H+ 
Sbjct:    17 YMKKLKSKPIQTKALTSATLSFISSVVAQKFIEKKKINWNAVVKFTVWGL-ISSPLVHYW 75

Query:    72 NKFLDAIFKG-RDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKD- 129
             +  LD +FK  +D      K++++QL+F+P+IN  F +    +++GKP  S++ K+  D 
Sbjct:    76 HIILDRLFKNIKDKYQSWGKLIVDQLVFAPFINIAFYSVLA-ILDGKP-KSILFKLYFDL 133

Query:   130 YPAVQFTSWKV 140
             +P ++  SWKV
Sbjct:   134 FPTLK-ASWKV 143

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

MGI|MGI:107487 Pxmp2 "peroxisomal membrane protein 2" [Mus musculus (taxid:10090)]

 Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 38/147 (25%), Positives = 77/147 (52%)

Query:     1 MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVXXXXXXXXXXXXXFD 60
             + ++ K A  +YL+ L+++P+ TKA+++G+L+   + +AQ I                  
Sbjct:    14 LGSLPKRALAQYLLLLKLYPVLTKAVSSGILSALGNLLAQTIEKKQRKDSRLLEVSGLLR 73

Query:    61 F-GYGV----PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGL-VV 114
             +  YG+    P  H+L  F++         +  K++LL++L F+P   FL + +F + ++
Sbjct:    74 YLVYGLFVTGPLSHYLYLFMEYSVPPEVPWASVKRLLLDRLFFAP--TFLLLFFFVMNLL 131

Query:   115 EGKPWGSVMKKVRKDY-PAVQFTSWKV 140
             EGK     + K+R  + PA+Q  +W++
Sbjct:   132 EGKNVSVFVAKMRSGFWPALQM-NWRM 157

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=IDA

GO:0005777 "peroxisome" evidence=ISO

GO:0005778 "peroxisomal membrane" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0043234 "protein complex" evidence=ISO

UNIPROTKB|G4N5Q6 MGG_05292 "Integral membrane protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 140 (54.3 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 38/132 (28%), Positives = 61/132 (46%)

Query:    12 YLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVXXXXXXXXXXXXXFDFGYGV----PF 67
             Y+ QL+ +PLRTK +TAG L+G  + IA  ++                   YG     P 
Sbjct:    69 YIKQLEDNPLRTKMLTAGTLSGAQELIASFLAKDRNKHGNYFTSRVPKMAAYGALVSAPM 128

Query:    68 GHFLNKFLDAIFKGRDN-KSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKV 126
             GHFL   L   FK R + ++   ++++  LI +P  N +++T   L+   + +  V   V
Sbjct:   129 GHFLIWLLQKAFKNRTSLRAKIMQIIVSNLIIAPIQNSVYLTAMALIAGARTYHQVRATV 188

Query:   127 RKDYPAVQFTSW 138
             R  +  V   SW
Sbjct:   189 RVGFWRVMKVSW 200

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

ASPGD|ASPL0000063859 AN7258 [Emericella nidulans (taxid:162425)]

 Score = 136 (52.9 bits), Expect = 5.7e-09, P = 5.7e-09
 Identities = 37/132 (28%), Positives = 60/132 (45%)

Query:    12 YLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVXXXXXXXXXXXXXFDFGYGV----PF 67
             YL QLQ +PLRTK +T+GVL+   + +A  ++                   YG+    P 
Sbjct:    51 YLRQLQSNPLRTKMLTSGVLSSAQEFLASYLANDVSKHGHYFSSRVPKMLLYGMFISAPL 110

Query:    68 GHFLNKFLDAIFKGRDN-KSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKV 126
             GH L   L  +F GR + K+   ++L   LI SP  N +++T   ++   +    V   +
Sbjct:   111 GHVLVGILQKVFAGRTSLKAKVLQILASNLIVSPIQNVVYLTCMAIIAGARTLHQVRATI 170

Query:   127 RKDYPAVQFTSW 138
             +  +  V   SW
Sbjct:   171 KAGFFPVMKVSW 182

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|G3V9N2 Pxmp2 "Peroxisomal membrane protein 2, isoform CRA_b" [Rattus norvegicus (taxid:10116)]

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 38/147 (25%), Positives = 76/147 (51%)

Query:     1 MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVXXXXXXXXXXXXXFD 60
             + ++ K A  +YL+ L+ +P+ TKA+++G+L+   + +AQ I                  
Sbjct:    14 LGSLPKRALAQYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLR 73

Query:    61 F-GYGV----PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGL-VV 114
             +  YG+    P  H+L  F++         +  K++LL++L F+P   FL + +F + ++
Sbjct:    74 YLVYGLFVTGPLSHYLYLFMEYWVPPEVPWARVKRLLLDRLFFAP--TFLLLFFFVMNLL 131

Query:   115 EGKPWGSVMKKVRKDY-PAVQFTSWKV 140
             EGK     + K+R  + PA+Q  +W++
Sbjct:   132 EGKNISVFVAKMRSGFWPALQM-NWRM 157

GO:0005739 "mitochondrion" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

RGD|61812 Pxmp2 "peroxisomal membrane protein 2" [Rattus norvegicus (taxid:10116)]

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 38/147 (25%), Positives = 76/147 (51%)

Query:     1 MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVXXXXXXXXXXXXXFD 60
             + ++ K A  +YL+ L+ +P+ TKA+++G+L+   + +AQ I                  
Sbjct:    14 LRSLPKRALAQYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLR 73

Query:    61 F-GYGV----PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGL-VV 114
             +  YG+    P  H+L  F++         +  K++LL++L F+P   FL + +F + ++
Sbjct:    74 YLVYGLFVTGPLSHYLYLFMEYWVPPEVPWARVKRLLLDRLFFAP--TFLLLFFFVMNLL 131

Query:   115 EGKPWGSVMKKVRKDY-PAVQFTSWKV 140
             EGK     + K+R  + PA+Q  +W++
Sbjct:   132 EGKNISVFVAKMRSGFWPALQM-NWRM 157

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO

GO:0005777 "peroxisome" evidence=IDA

GO:0005778 "peroxisomal membrane" evidence=ISO;IDA

GO:0005779 "integral to peroxisomal membrane" evidence=TAS

GO:0043234 "protein complex" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	140
KOG1944	222	consensus Peroxisomal membrane protein MPV17 and r	99.96
PF04117	68	Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR0	98.01

>KOG1944 consensus Peroxisomal membrane protein MPV17 and related proteins [General function prediction only]

Probab=99.96  E-value=2.4e-28  Score=184.60  Aligned_cols=124  Identities=32%  Similarity=0.557  Sum_probs=117.5

Q ss_pred             HhhCchHHHHHHHHHHH-HHHHHHHHhhhC-----CCchhHHHHHHHHHHhhhcccchhhHHHHHHHhhccCCChHHHHH
Q 032451           16 LQVHPLRTKAITAGVLA-GCSDAIAQKISG-----VKKLQLKRLLLLMLFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAK   89 (140)
Q Consensus        16 l~~~Pl~t~~~t~~~l~-~~gD~laQ~~~~-----~~~~D~~R~~~~~~~G~~~~gP~~~~wy~~L~~~~~~~~~~~~~~   89 (140)
                      ...+|+.+++++++.+. .+||+++|.++.     .+++|+.|++||+++|+++.||.+|+||+.||+.+|.++..++++
T Consensus        46 ~~~~~~l~~~i~~~~~~~~~~d~~~q~~~~~~~~~~~~~d~~rtlr~~~~G~~f~gp~~~~Wy~~L~~~~p~~~~~~~~~  125 (222)
T KOG1944|consen   46 FSLYPLLTKAITTSLLLAAAGDVISQSLEGRSKKLFQTLDLTRTLRMGIFGFLFVGPTLHYWYRLLSKLFPKKTLITVVK  125 (222)
T ss_pred             hhhhhHHHHHHHHHHHHHHhchhhhhhhhhhcccccccccHHHHHHHHhhhhheeccchhHHHHHHHHHccCccHHHHHH
Confidence            46789999999999888 999999999863     367999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHhhCHHHHHhCccC
Q 032451           90 KVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKV  140 (140)
Q Consensus        90 Kvl~Dq~i~~P~~~~~f~~~~~~~leg~~~~~~~~~~k~~~~~~~~~~w~v  140 (140)
                      |++.||++++|+.+.+|+.+++ ++||++.+++.+++++++||++++||++
T Consensus       126 kvl~dql~~~P~~~~~ff~~~~-~legk~~~~~~~~~~~~~~p~l~~~~~~  175 (222)
T KOG1944|consen  126 KVLLDQLVFAPLFIVVFFLLMG-LLEGKTNEEAKAKLKRKFWPTLKANWMV  175 (222)
T ss_pred             HHHHhhhhhchHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHhhhhee
Confidence            9999999999999999999999 9999999999999999999999999985

>PF04117 Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR007248 The 22 kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes

Probab=98.01  E-value=1.8e-06  Score=53.59  Aligned_cols=30  Identities=37%  Similarity=0.841  Sum_probs=28.1

Q ss_pred             HHHHhcCCChHHHHHHHHhhCHHHHHhCccC
Q 032451          110 FGLVVEGKPWGSVMKKVRKDYPAVQFTSWKV  140 (140)
Q Consensus       110 ~~~~leg~~~~~~~~~~k~~~~~~~~~~w~v  140 (140)
                      |+ ++||+|++++++++|++|+++++++|++
T Consensus         1 Mg-~l~g~s~~~~~~~l~~~~~~~~~~~~~~   30 (68)
T PF04117_consen    1 MG-LLEGKSWEEIKEKLKRDYWPTLKASWKF   30 (68)
T ss_pred             CC-cccCCCHHHHHHHHHHHHHHHHHHHhHh
Confidence            56 8999999999999999999999999975

PMP22 seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information []. Mpv17 is a closely related peroxisomal protein involved in the development of early-onset glomerulosclerosis []. A member of this family found in Saccharomyces cerevisiae (Baker's yeast) is an integral membrane protein of the inner mitochondrial membrane and has been suggested to play a role in mitochondrial function during heat shock [].; GO: 0016021 integral to membrane

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00