Citrus Sinensis ID: 032452

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Protein Sequence
MVEFQLLCSFSILRKSSLSLFAGCRVADSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFVKLPELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETSANKQEDD
Secondary Structure (PSIPRED)
cEEEHHcHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcHHHHHHcccccccHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHcccccHHHHccHHHHHHHHHHcHHHHHcccccHHHHHHHHHHHHHHHHHHHHccHHHHHHcccccccHHHccHHcccc
Coil and Loop (DISEMBL)
MVEFQLLCSFSILRKSSlslfagcrvadsTGEIVKGLQCYFDKALPIMLLYKSEREqyedsmaadvspssvygAEHLLRLFVKLPELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFflsryhsaedvetsankqedd
Flexible Loop (DISEMBL)
MVEFQLLCSFSILRKSSLSLFAGCRVADSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFVKLPELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFlsryhsaedvetsankqedd
Low Complexity Region (SEG)
MVEFQLLCSFSILRKSSLSLFAGCRVADSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFVKLPELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETSANKQEDD
Disordered region (IsUnstruct)
***FQLLCSFSILRKSSLSLFAGCRVADSTGEIVKGLQCYFDKALPIMLLYKS****************SVYGAEHLLRLFVKLPELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRY****************
Disordered Region (DISOPRED)
MVEFQLLCSFSI******************GEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFVKLPELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHS**************
Disordered Region (DISEMBL)
MVEFQLLCSFSILRKSSLSLFAGCRVADSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFVKLPELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHS**************
Disordered Region (DISPRO)
MVEFQLLCSFSILRKSSLSLFAGCRVADSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFVKLPELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETSA******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVEFQLLCSFSILRKSSLSLFAGCRVADSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFVKLPELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETSANKQEDD
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	140	2.2.26 [Sep-21-2011]
Q54RM0	379	NuA4 complex subunit EAF3	yes	no	0.664	0.245	0.494	4e-19
Q6C9M9	387	Chromatin modification-re	yes	no	0.707	0.255	0.427	4e-17
Q5BBV4	327	Chromatin modification-re	yes	no	0.771	0.330	0.377	1e-15
Q4P827	303	Chromatin modification-re	N/A	no	0.557	0.257	0.41	2e-14
Q6AYU1	323	Mortality factor 4-like p	yes	no	0.721	0.312	0.416	2e-14
P60762	362	Mortality factor 4-like p	no	no	0.721	0.279	0.416	3e-14
Q5NVP9	323	Mortality factor 4-like p	yes	no	0.721	0.312	0.416	3e-14
Q9UBU8	362	Mortality factor 4-like p	no	no	0.721	0.279	0.416	3e-14
Q6BT38	316	Chromatin modification-re	yes	no	0.664	0.294	0.395	9e-14
P0CO86	305	Chromatin modification-re	yes	no	0.664	0.304	0.410	9e-14

>sp|Q54RM0|EAF3_DICDI NuA4 complex subunit EAF3 homolog OS=Dictyostelium discoideum GN=DDB_G0283075 PE=3 SV=1

 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 2/95 (2%)

Query: 32  EIVKGLQCYFDKALPIMLLYKSEREQYEDSMAADV--SPSSVYGAEHLLRLFVKLPELLV 89
           E++ G++ YF+KAL  +LLYK ER QY+  +  +   S S +YGAEHLLRLFVKLP+LLV
Sbjct: 271 EVINGIKQYFNKALGTLLLYKFERPQYDSILKTNPKKSMSDIYGAEHLLRLFVKLPQLLV 330

Query: 90  HAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRY 124
            + +EE+T+T L+     +L++L+K+ ST FL  Y
Sbjct: 331 ISNLEEKTITQLKDAFEIVLEYLEKNSSTLFLKEY 365

Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A. The NuA4 complex is also involved in DNA repair. Also component of a complex which acts to repress transcription by deacetylation of nucleosomal histones.
Dictyostelium discoideum (taxid: 44689)

>sp|Q6C9M9|EAF3_YARLI Chromatin modification-related protein EAF3 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=EAF3 PE=3 SV=1

 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 66/103 (64%), Gaps = 4/103 (3%)

Query: 23  GCRVADSTGEIVKGLQCYFDKALPIMLLYKSEREQY----EDSMAADVSPSSVYGAEHLL 78
           G   AD   E+V G++ YFD++L  +LLY+ EREQY    +    ++ + S VYGAEHLL
Sbjct: 267 GSADADILNEVVSGIKLYFDRSLGSILLYRFEREQYLQITQSPDHSNKTMSEVYGAEHLL 326

Query: 79  RLFVKLPELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFL 121
           RLFV LP L+    ++ +++ +L+  L D ++FL  HQ T+FL
Sbjct: 327 RLFVSLPGLIAMTNMDAQSVAVLKEHLEDFVRFLSTHQKTYFL 369

Involved in deacetylation of histones, chromatin assembly and chromosome segregation. May act as a transcriptional oscillator, directing histone deacetylases to specific chromosomal domains. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A. The NuA4 complex is also involved in DNA repair.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

>sp|Q5BBV4|EAF3_EMENI Chromatin modification-related protein eaf3 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=eaf3 PE=3 SV=1

 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 6/114 (5%)

Query: 22  AGCRVADSTGEIVKGLQCYFDKALPIMLLYKSEREQYE------DSMAADVSPSSVYGAE 75
            G    D   E+V G++ YFDK+L  +LLY+ EREQY       +S  AD  P  VYGAE
Sbjct: 192 TGSSEVDVLEEVVMGIRDYFDKSLDKILLYRFEREQYRVLRKRWESETADKGPLDVYGAE 251

Query: 76  HLLRLFVKLPELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAED 129
           HL RLF  +PEL+    ++ ++   L+ +L     +L K+ + +F +RY +A +
Sbjct: 252 HLTRLFATMPELIAQTNMDLQSTNRLREELSKFTIWLSKNSNHYFATRYVTASN 305

Involved in deacetylation of histones, chromatin assembly and chromosome segregation. May act as a transcriptional oscillator, directing histone deacetylases to specific chromosomal domains. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A. The NuA4 complex is also involved in DNA repair.

Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321)

>sp|Q4P827|EAF3_USTMA Chromatin modification-related protein EAF3 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=EAF3 PE=3 SV=1

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 22/100 (22%)

Query: 32  EIVKGLQCYFDKALPIMLLYKSEREQYED----------------------SMAADVSPS 69
           E++KGL+ YFD++L   LLY+ ER QY D                      SM  ++ PS
Sbjct: 203 EVLKGLKLYFDRSLGQNLLYRFERAQYVDYRKKNGPKMGDGDVGNARTANGSMGGEMEPS 262

Query: 70  SVYGAEHLLRLFVKLPELLVHAKIEEETLTLLQHKLVDLL 109
           +VYGAEHLLRLFV LP ++VH  ++ E+++LL+  L + L
Sbjct: 263 NVYGAEHLLRLFVTLPMIIVHTSMDAESISLLKEHLAEFL 302

Involved in deacetylation of histones, chromatin assembly and chromosome segregation. May act as a transcriptional oscillator, directing histone deacetylases to specific chromosomal domains. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A. The NuA4 complex is also involved in DNA repair.

Ustilago maydis (strain 521 / FGSC 9021) (taxid: 237631)

>sp|Q6AYU1|MO4L1_RAT Mortality factor 4-like protein 1 OS=Rattus norvegicus GN=Morf4l1 PE=2 SV=1

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/108 (41%), Positives = 65/108 (60%), Gaps = 7/108 (6%)

Query: 29  STGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMA--ADVSPSSVYGAEHLLRLFVKLPE 86
           +  E+V G++ YF+  L   LLYK ER QY + +A   D   S VYGA HLLRLFV++  
Sbjct: 213 AVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGA 272

Query: 87  LLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETSA 134
           +L +  ++E++L LL + L D LK+L K+ +T F     SA D E + 
Sbjct: 273 MLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLF-----SASDYEVAP 315

Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histones H4 and H2A. This modification may both alter nucleosome - DNA interactions and promote interaction of the modified histones with other proteins which positively regulate transcription. This complex may be required for the activation of transcriptional programs associated with oncogene and proto-oncogene mediated growth induction, tumor suppressor mediated growth arrest and replicative senescence, apoptosis, and DNA repair. The NuA4 complex ATPase and helicase activities seem to be, at least in part, contributed by the association of RUVBL1 and RUVBL2 with EP400. NuA4 may also play a direct role in DNA repair when directly recruited to sites of DNA damage. Also component of the mSin3A complex which acts to repress transcription by deacetylation of nucleosomal histones.Required for homologous recombination repair (HRR) and resistance to mitomycin C (MMC). Involved in the localization of PALB2, BRCA2 and RAD51, but not BRCA1, to DNA-damage foci.

Rattus norvegicus (taxid: 10116)

>sp|P60762|MO4L1_MOUSE Mortality factor 4-like protein 1 OS=Mus musculus GN=Morf4l1 PE=2 SV=2

 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/108 (41%), Positives = 65/108 (60%), Gaps = 7/108 (6%)

Query: 29  STGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMA--ADVSPSSVYGAEHLLRLFVKLPE 86
           +  E+V G++ YF+  L   LLYK ER QY + +A   D   S VYGA HLLRLFV++  
Sbjct: 252 AVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGA 311

Query: 87  LLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETSA 134
           +L +  ++E++L LL + L D LK+L K+ +T F     SA D E + 
Sbjct: 312 MLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLF-----SASDYEVAP 354

Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histones H4 and H2A. This modification may both alter nucleosome - DNA interactions and promote interaction of the modified histones with other proteins which positively regulate transcription. This complex may be required for the activation of transcriptional programs associated with oncogene and proto-oncogene mediated growth induction, tumor suppressor mediated growth arrest and replicative senescence, apoptosis, and DNA repair. The NuA4 complex ATPase and helicase activities seem to be, at least in part, contributed by the association of RUVBL1 and RUVBL2 with EP400. NuA4 may also play a direct role in DNA repair when directly recruited to sites of DNA damage. Also component of the mSin3A complex which acts to repress transcription by deacetylation of nucleosomal histones. Required for homologous recombination repair (HRR) and resistance to mitomycin C (MMC). Involved in the localization of PALB2, BRCA2 and RAD51, but not BRCA1, to DNA-damage foci.

Mus musculus (taxid: 10090)

>sp|Q5NVP9|MO4L1_PONAB Mortality factor 4-like protein 1 OS=Pongo abelii GN=MORF4L1 PE=2 SV=1

 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/108 (41%), Positives = 65/108 (60%), Gaps = 7/108 (6%)

Query: 29  STGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMA--ADVSPSSVYGAEHLLRLFVKLPE 86
           +  E+V G++ YF+  L   LLYK ER QY + +A   D   S VYGA HLLRLFV++  
Sbjct: 213 AVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGA 272

Query: 87  LLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETSA 134
           +L +  ++E++L LL + L D LK+L K+ +T F     SA D E + 
Sbjct: 273 MLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLF-----SASDYEVAP 315

Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histones H4 and H2A. This modification may both alter nucleosome - DNA interactions and promote interaction of the modified histones with other proteins which positively regulate transcription. This complex may be required for the activation of transcriptional programs associated with oncogene and proto-oncogene mediated growth induction, tumor suppressor mediated growth arrest and replicative senescence, apoptosis, and DNA repair. The NuA4 complex ATPase and helicase activities seem to be, at least in part, contributed by the association of RUVBL1 and RUVBL2 with EP400. NuA4 may also play a direct role in DNA repair when directly recruited to sites of DNA damage. Also component of the mSin3A complex which acts to repress transcription by deacetylation of nucleosomal histones. Required for homologous recombination repair (HRR) and resistance to mitomycin C (MMC). Involved in the localization of PALB2, BRCA2 and RAD51, but not BRCA1, to DNA-damage foci.

Pongo abelii (taxid: 9601)

>sp|Q9UBU8|MO4L1_HUMAN Mortality factor 4-like protein 1 OS=Homo sapiens GN=MORF4L1 PE=1 SV=2

 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/108 (41%), Positives = 65/108 (60%), Gaps = 7/108 (6%)

Query: 29  STGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMA--ADVSPSSVYGAEHLLRLFVKLPE 86
           +  E+V G++ YF+  L   LLYK ER QY + +A   D   S VYGA HLLRLFV++  
Sbjct: 252 AVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGA 311

Query: 87  LLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETSA 134
           +L +  ++E++L LL + L D LK+L K+ +T F     SA D E + 
Sbjct: 312 MLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLF-----SASDYEVAP 354

Component of the NuA4 histone acetyltransferase (HAT) complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histones H4 and H2A. This modification may both alter nucleosome - DNA interactions and promote interaction of the modified histones with other proteins which positively regulate transcription. This complex may be required for the activation of transcriptional programs associated with oncogene and proto-oncogene mediated growth induction, tumor suppressor mediated growth arrest and replicative senescence, apoptosis, and DNA repair. The NuA4 complex ATPase and helicase activities seem to be, at least in part, contributed by the association of RUVBL1 and RUVBL2 with EP400. NuA4 may also play a direct role in DNA repair when directly recruited to sites of DNA damage. Also component of the mSin3A complex which acts to repress transcription by deacetylation of nucleosomal histones. Required for homologous recombination repair (HRR) and resistance to mitomycin C (MMC). Involved in the localization of PALB2, BRCA2 and RAD51, but not BRCA1, to DNA-damage foci.

Homo sapiens (taxid: 9606)

>sp|Q6BT38|EAF3_DEBHA Chromatin modification-related protein EAF3 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=EAF3 PE=3 SV=1

 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 61/96 (63%), Gaps = 3/96 (3%)

Query: 28  DSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSM---AADVSPSSVYGAEHLLRLFVKL 84
           D   EI++GL+ YF+K+L ++LLYK ER QY + +     D+ PS +YG EHLLRLFV L
Sbjct: 205 DVINEIMQGLELYFNKSLSLILLYKFERLQYMNLLKEHGDDLRPSELYGVEHLLRLFVAL 264

Query: 85  PELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFF 120
           P L+    ++  ++ +L  +  D+L+F+  + S + 
Sbjct: 265 PGLIAQTTMDSVSINVLVKQSKDILEFITDNMSVYL 300

Involved in deacetylation of histones, chromatin assembly and chromosome segregation. May act as a transcriptional oscillator, directing histone deacetylases to specific chromosomal domains. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A. The NuA4 complex is also involved in DNA repair.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

>sp|P0CO86|EAF3_CRYNJ Chromatin modification-related protein EAF3 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=EAF3 PE=3 SV=1

 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 2/95 (2%)

Query: 32  EIVKGLQCYFDKALPIMLLYKSEREQY-EDSMAADVSP-SSVYGAEHLLRLFVKLPELLV 89
           EI+ G+  YFDKAL   LLY+ ER QY E        P S +YGAEHLLRLFV     + 
Sbjct: 198 EIISGITLYFDKALGNNLLYRFERAQYVEQKRQNPEKPMSEIYGAEHLLRLFVNFGPFIA 257

Query: 90  HAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRY 124
           +  I+ E+L +L+  + D+++++ K Q   F+  Y
Sbjct: 258 YTNIDTESLNILRDYINDIMQWMIKEQKRLFMKEY 292

Involved in deacetylation of histones, chromatin assembly and chromosome segregation. May act as a transcriptional oscillator, directing histone deacetylases to specific chromosomal domains. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A. The NuA4 complex is also involved in DNA repair.

Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	140
449447041	313	PREDICTED: mortality factor 4-like prote	0.8	0.357	0.732	2e-40
356510513	322	PREDICTED: nuA4 complex subunit EAF3 hom	0.8	0.347	0.696	2e-39
356514437	325	PREDICTED: male-specific lethal 3 homolo	0.814	0.350	0.675	2e-38
356563568	319	PREDICTED: nuA4 complex subunit EAF3 hom	0.735	0.322	0.699	2e-36
255567903	318	chromatin binding protein, putative [Ric	0.814	0.358	0.643	2e-36
356511911	319	PREDICTED: nuA4 complex subunit EAF3 hom	0.721	0.316	0.702	3e-36
297848482	327	chromatin binding protein [Arabidopsis l	0.792	0.339	0.652	4e-36
224094262	332	predicted protein [Populus trichocarpa]	0.735	0.310	0.679	8e-36
145335003	327	mortality factor 4-like protein 1 [Arabi	0.764	0.327	0.654	1e-34
302142251	306	unnamed protein product [Vitis vinifera]	0.728	0.333	0.676	1e-34

>gi|449447041|ref|XP_004141278.1| PREDICTED: mortality factor 4-like protein 1-like [Cucumis sativus] gi|449508171|ref|XP_004163239.1| PREDICTED: mortality factor 4-like protein 1-like [Cucumis sativus]

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 82/112 (73%), Positives = 94/112 (83%)

Query: 28  DSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFVKLPEL 87
           +S GEIVKGL CYFDKALP+MLLYKSER+QYE+ M  DVSPSS+YGAEHLLRLFV+LPEL
Sbjct: 202 ESIGEIVKGLICYFDKALPVMLLYKSERQQYEELMINDVSPSSIYGAEHLLRLFVRLPEL 261

Query: 88  LVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETSANKQED 139
           L  A IEEETL  LQ KLVDLLKFL+K+Q+ FFLS YH  E++ETS N  +D
Sbjct: 262 LSQANIEEETLMELQQKLVDLLKFLRKNQNAFFLSSYHVPENMETSTNNADD 313

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356510513|ref|XP_003523982.1| PREDICTED: nuA4 complex subunit EAF3 homolog [Glycine max]

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 78/112 (69%), Positives = 93/112 (83%)

Query: 26  VADSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFVKLP 85
           V DS  EI+KGL CYFDKALP+MLLYK+ER+QY+++  A+V PS++YGAEHLLRLFVKLP
Sbjct: 206 VGDSVEEIMKGLSCYFDKALPVMLLYKNERQQYQEACPANVFPSAIYGAEHLLRLFVKLP 265

Query: 86  ELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETSANKQ 137
           ELL HA +EEETL  LQ  L+D L+FLQK+QSTFFLS YH AE +E S NKQ
Sbjct: 266 ELLFHASVEEETLMELQAHLIDFLRFLQKNQSTFFLSTYHVAEGIENSTNKQ 317

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356514437|ref|XP_003525912.1| PREDICTED: male-specific lethal 3 homolog [Glycine max]

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 77/114 (67%), Positives = 93/114 (81%)

Query: 26  VADSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFVKLP 85
           + DS  EI+KGL CYFDKALP+MLLYK+E +QY+++  A+V PS++YGAEHLLRLFVKLP
Sbjct: 212 MGDSVEEIMKGLSCYFDKALPVMLLYKNEHQQYQEACPANVFPSAIYGAEHLLRLFVKLP 271

Query: 86  ELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETSANKQED 139
           ELL HA IEE+TL  LQ  L+D L+FLQK+QSTFFLS YH AE +E S NKQ D
Sbjct: 272 ELLFHASIEEKTLVELQAHLIDFLRFLQKNQSTFFLSTYHVAEGIENSTNKQGD 325

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563568|ref|XP_003550033.1| PREDICTED: nuA4 complex subunit EAF3 homolog [Glycine max]

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 72/103 (69%), Positives = 85/103 (82%)

Query: 26  VADSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFVKLP 85
             DS GEI+KG++CYFDKALP+MLLYK ER+QY DS+  +VSPS++YGAEHLLRLFVKLP
Sbjct: 206 APDSIGEILKGIRCYFDKALPMMLLYKKERKQYNDSIVDNVSPSTIYGAEHLLRLFVKLP 265

Query: 86  ELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAE 128
           ELL +  IEEETL  LQ KL+D LKFLQK+QSTFFLS Y   +
Sbjct: 266 ELLAYVTIEEETLNRLQQKLLDFLKFLQKNQSTFFLSAYDGPK 308

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255567903|ref|XP_002524929.1| chromatin binding protein, putative [Ricinus communis] gi|223535764|gb|EEF37426.1| chromatin binding protein, putative [Ricinus communis]

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/115 (64%), Positives = 91/115 (79%), Gaps = 1/115 (0%)

Query: 26  VADSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFVKLP 85
           + DS GEI+KG++CYFDKALP+MLLYK ER QY+D++  D SPS++YGAEHLLRLFVKLP
Sbjct: 205 MTDSIGEILKGIRCYFDKALPVMLLYKKERHQYDDAVENDASPSTIYGAEHLLRLFVKLP 264

Query: 86  ELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETSANKQEDD 140
           ELL +  IEEETL  LQ KL+D LKFLQK+QSTFFLS Y  ++ V     K +D+
Sbjct: 265 ELLAYVNIEEETLARLQQKLLDFLKFLQKNQSTFFLSAYDGSK-VSEGKGKGKDE 318

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356511911|ref|XP_003524665.1| PREDICTED: nuA4 complex subunit EAF3 homolog [Glycine max]

 Score =  156 bits (394), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 71/101 (70%), Positives = 85/101 (84%)

Query: 28  DSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFVKLPEL 87
           DS GEI+KG++CYFDKALP+MLLYK ER+QY D++  +VSPS++YGAEHLLRLFVKLPEL
Sbjct: 208 DSIGEILKGIRCYFDKALPMMLLYKKERKQYNDAIVDNVSPSTIYGAEHLLRLFVKLPEL 267

Query: 88  LVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAE 128
           L +  IEEETL  LQ KL+D LKFLQK+QSTFFLS Y   +
Sbjct: 268 LAYVTIEEETLNRLQQKLLDFLKFLQKNQSTFFLSAYDGTK 308

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297848482|ref|XP_002892122.1| chromatin binding protein [Arabidopsis lyrata subsp. lyrata] gi|297337964|gb|EFH68381.1| chromatin binding protein [Arabidopsis lyrata subsp. lyrata]

 Score =  155 bits (393), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 75/115 (65%), Positives = 94/115 (81%), Gaps = 4/115 (3%)

Query: 25  RVADSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFVKL 84
           RV DS  EI+KGL+CYFDKALP+MLLY +ER+QYE+S++ADVSPS+VYGAEHLLRLFVKL
Sbjct: 217 RVTDSLEEILKGLRCYFDKALPVMLLYNNERKQYEESVSADVSPSTVYGAEHLLRLFVKL 276

Query: 85  PELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETSANKQED 139
           PELL H  + EETL  LQ   VD+L+FL+K+QS FF+S Y + E++E    K+ED
Sbjct: 277 PELLAHVNMAEETLKELQDNFVDILRFLRKNQSVFFVSAYKAVEEME----KKED 327

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224094262|ref|XP_002310115.1| predicted protein [Populus trichocarpa] gi|222853018|gb|EEE90565.1| predicted protein [Populus trichocarpa]

 Score =  154 bits (390), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 70/103 (67%), Positives = 86/103 (83%)

Query: 26  VADSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFVKLP 85
           + DS GEI+KG++CYFDKALP+MLLYK ER+QY D++  DVSPS++YGAEHLLRLFVKLP
Sbjct: 220 ITDSIGEILKGIRCYFDKALPVMLLYKKERQQYHDTVKIDVSPSTIYGAEHLLRLFVKLP 279

Query: 86  ELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAE 128
           ELL +  IEE+T T LQ KL+D LKFL K+QSTFFLS Y  ++
Sbjct: 280 ELLAYVNIEEDTSTRLQQKLLDFLKFLHKNQSTFFLSAYDGSK 322

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145335003|ref|NP_171774.2| mortality factor 4-like protein 1 [Arabidopsis thaliana] gi|66792606|gb|AAY56405.1| At1g02740 [Arabidopsis thaliana] gi|332189344|gb|AEE27465.1| mortality factor 4-like protein 1 [Arabidopsis thaliana]

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 70/107 (65%), Positives = 88/107 (82%)

Query: 25  RVADSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFVKL 84
           RV DS  EI+KGL+CYFDKALP+MLLY +ER+QYE+S++  VSPS+VYGAEHLLRLFVKL
Sbjct: 217 RVTDSLEEILKGLRCYFDKALPVMLLYNNERKQYEESVSGGVSPSTVYGAEHLLRLFVKL 276

Query: 85  PELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVE 131
           PELLVH  + EETL  LQ   VD+L+FL+K+QS  F+S Y + E++E
Sbjct: 277 PELLVHVNMAEETLKELQDNFVDILRFLRKNQSVLFVSTYKAVEEME 323

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142251|emb|CBI19454.3| unnamed protein product [Vitis vinifera]

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 69/102 (67%), Positives = 89/102 (87%)

Query: 26  VADSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFVKLP 85
           ++DS GEI+KGL+CYFDKALP+MLLY+ ER+QY++++A +VSPS++YGAEHLLRLFVKLP
Sbjct: 204 ISDSAGEILKGLRCYFDKALPVMLLYERERQQYQEAIANNVSPSTIYGAEHLLRLFVKLP 263

Query: 86  ELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSA 127
           ELL HA IE+ET   LQ +L+D LKFLQK+QS FFL+ Y S+
Sbjct: 264 ELLFHANIEKETSKELQMELLDFLKFLQKNQSAFFLTSYISS 305

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	140
TAIR|locus:2024725	327	AT1G02740 [Arabidopsis thalian	0.764	0.327	0.654	7.4e-34
TAIR|locus:2114980	320	AT4G37280 [Arabidopsis thalian	0.821	0.359	0.565	6.9e-31
DICTYBASE|DDB_G0283075	379	DDB_G0283075 "NuA4 histone H4	0.664	0.245	0.494	2.8e-19
RGD|1308699	371	Msl3l2 "male-specific lethal 3	0.464	0.175	0.514	2e-15
UNIPROTKB|F1N4R2	296	MORF4L1 "Uncharacterized prote	0.714	0.337	0.420	2.7e-15
ASPGD|ASPL0000050701	327	AN1976 [Emericella nidulans (t	0.792	0.339	0.386	3e-15
ZFIN|ZDB-GENE-040718-348	323	morf4l1 "mortality factor 4 li	0.714	0.309	0.420	3.7e-15
UNIPROTKB|K7GQW8	323	MORF4L1 "Uncharacterized prote	0.714	0.309	0.420	4.8e-15
UNIPROTKB|Q5NVP9	323	MORF4L1 "Mortality factor 4-li	0.714	0.309	0.420	4.8e-15
RGD|1307938	323	Morf4l1 "mortality factor 4 li	0.714	0.309	0.420	4.8e-15

TAIR|locus:2024725 AT1G02740 [Arabidopsis thaliana (taxid:3702)]

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 70/107 (65%), Positives = 88/107 (82%)

Query:    25 RVADSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFVKL 84
             RV DS  EI+KGL+CYFDKALP+MLLY +ER+QYE+S++  VSPS+VYGAEHLLRLFVKL
Sbjct:   217 RVTDSLEEILKGLRCYFDKALPVMLLYNNERKQYEESVSGGVSPSTVYGAEHLLRLFVKL 276

Query:    85 PELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVE 131
             PELLVH  + EETL  LQ   VD+L+FL+K+QS  F+S Y + E++E
Sbjct:   277 PELLVHVNMAEETLKELQDNFVDILRFLRKNQSVLFVSTYKAVEEME 323

GO:0005634 "nucleus" evidence=ISM;IEA

TAIR|locus:2114980 AT4G37280 [Arabidopsis thaliana (taxid:3702)]

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 65/115 (56%), Positives = 84/115 (73%)

Query:    26 VADSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAADVSPSSVYGAEHLLRLFVKLP 85
             V DS  EI+KG++ YFDKALP+MLLYK ER QY++S+  D SPS+VYGAEHLLRLFVKLP
Sbjct:   206 VTDSVAEILKGIRSYFDKALPVMLLYKKERRQYQESIVDDTSPSTVYGAEHLLRLFVKLP 265

Query:    86 ELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETSANKQEDD 140
             +L  +  +EEET + +Q  L D LKF+QK+QSTF L   + ++ V     K +DD
Sbjct:   266 DLFSYVNMEEETWSRMQQTLSDFLKFIQKNQSTFLLPSAYDSDKVSDGKGKGKDD 320

GO:0005634 "nucleus" evidence=ISM;IEA

DICTYBASE|DDB_G0283075 DDB_G0283075 "NuA4 histone H4 acetyltransferase complex subunit" [Dictyostelium discoideum (taxid:44689)]

 Score = 233 (87.1 bits), Expect = 2.8e-19, P = 2.8e-19
 Identities = 47/95 (49%), Positives = 68/95 (71%)

Query:    32 EIVKGLQCYFDKALPIMLLYKSEREQYEDSMAADV--SPSSVYGAEHLLRLFVKLPELLV 89
             E++ G++ YF+KAL  +LLYK ER QY+  +  +   S S +YGAEHLLRLFVKLP+LLV
Sbjct:   271 EVINGIKQYFNKALGTLLLYKFERPQYDSILKTNPKKSMSDIYGAEHLLRLFVKLPQLLV 330

Query:    90 HAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRY 124
              + +EE+T+T L+     +L++L+K+ ST FL  Y
Sbjct:   331 ISNLEEKTITQLKDAFEIVLEYLEKNSSTLFLKEY 365

GO:0005634 "nucleus" evidence=IEA

GO:0040008 "regulation of growth" evidence=IEA

GO:0016568 "chromatin modification" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006281 "DNA repair" evidence=IEA

RGD|1308699 Msl3l2 "male-specific lethal 3-like 2 (Drosophila)" [Rattus norvegicus (taxid:10116)]

 Score = 143 (55.4 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
 Identities = 36/70 (51%), Positives = 48/70 (68%)

Query:    68 PSSVYGAEHLLRLFVKLPELLVHAKIEEETL-TLLQHKLVDL-LKFLQKHQSTFFL-SRY 124
             PS +YGA+HLLRLFVKLPE+L      E+ L  LL+H  +DL L+FL ++Q+ FFL S Y
Sbjct:   297 PSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKH--LDLFLRFLAEYQADFFLESAY 354

Query:   125 HSAEDVETSA 134
              SA +   S+
Sbjct:   355 VSACEAHYSS 364

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1N4R2 MORF4L1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 193 (73.0 bits), Expect = 2.7e-15, P = 2.7e-15
 Identities = 45/107 (42%), Positives = 65/107 (60%)

Query:    29 STGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMA--ADVSPSSVYGAEHLLRLFVKLPE 86
             +  E+V G++ YF+  L   LLYK ER QY + +A   D   S VYGA HLLRLFV++  
Sbjct:   186 AVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGA 245

Query:    87 LLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETS 133
             +L +  ++E++L LL + L D LK+L K+ +T F     SA D E +
Sbjct:   246 MLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLF-----SASDYEVA 287

GO:0047485 "protein N-terminus binding" evidence=IEA

GO:0043968 "histone H2A acetylation" evidence=IEA

GO:0043967 "histone H4 acetylation" evidence=IEA

GO:0035267 "NuA4 histone acetyltransferase complex" evidence=IEA

GO:0016580 "Sin3 complex" evidence=IEA

GO:0016575 "histone deacetylation" evidence=IEA

GO:0000724 "double-strand break repair via homologous recombination" evidence=IEA

ASPGD|ASPL0000050701 AN1976 [Emericella nidulans (taxid:162425)]

 Score = 195 (73.7 bits), Expect = 3.0e-15, P = 3.0e-15
 Identities = 46/119 (38%), Positives = 68/119 (57%)

Query:    23 GCRVADSTGEIVKGLQCYFDKALPIMLLYKSEREQYE------DSMAADVSPSSVYGAEH 76
             G    D   E+V G++ YFDK+L  +LLY+ EREQY       +S  AD  P  VYGAEH
Sbjct:   193 GSSEVDVLEEVVMGIRDYFDKSLDKILLYRFEREQYRVLRKRWESETADKGPLDVYGAEH 252

Query:    77 LLRLFVKLPELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSA--EDVETS 133
             L RLF  +PEL+    ++ ++   L+ +L     +L K+ + +F +RY +A  E +E S
Sbjct:   253 LTRLFATMPELIAQTNMDLQSTNRLREELSKFTIWLSKNSNHYFATRYVTASNEYIEKS 311

GO:0071963 "establishment or maintenance of cell polarity regulating cell shape" evidence=IEA

GO:0030174 "regulation of DNA-dependent DNA replication initiation" evidence=IEA

GO:0030261 "chromosome condensation" evidence=IEA

GO:0006281 "DNA repair" evidence=IEA

GO:0016573 "histone acetylation" evidence=IEA

GO:0006368 "transcription elongation from RNA polymerase II promoter" evidence=IEA

GO:0060195 "negative regulation of antisense RNA transcription" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0016575 "histone deacetylation" evidence=IEA

GO:0035267 "NuA4 histone acetyltransferase complex" evidence=IEA

GO:0032221 "Rpd3S complex" evidence=IEA

GO:0033698 "Rpd3L complex" evidence=IEA

GO:0004402 "histone acetyltransferase activity" evidence=IEA

ZFIN|ZDB-GENE-040718-348 morf4l1 "mortality factor 4 like 1" [Danio rerio (taxid:7955)]

 Score = 194 (73.4 bits), Expect = 3.7e-15, P = 3.7e-15
 Identities = 45/107 (42%), Positives = 65/107 (60%)

Query:    29 STGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMA--ADVSPSSVYGAEHLLRLFVKLPE 86
             +  E+V G++ YF+  L   LLYK ER QY + +A   D S S +YGA HLLRLFV++  
Sbjct:   213 AVNEVVAGIREYFNVMLGTQLLYKFERPQYAEILANHPDTSMSQIYGAPHLLRLFVRIGA 272

Query:    87 LLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETS 133
             +L +  ++E++L LL   L D LK+L K+ S+ F     SA D E +
Sbjct:   273 MLAYTPLDEKSLALLLSYLQDFLKYLVKNSSSLF-----SASDYEVA 314

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|K7GQW8 MORF4L1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 193 (73.0 bits), Expect = 4.8e-15, P = 4.8e-15
 Identities = 45/107 (42%), Positives = 65/107 (60%)

Query:    29 STGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMA--ADVSPSSVYGAEHLLRLFVKLPE 86
             +  E+V G++ YF+  L   LLYK ER QY + +A   D   S VYGA HLLRLFV++  
Sbjct:   213 AVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGA 272

Query:    87 LLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETS 133
             +L +  ++E++L LL + L D LK+L K+ +T F     SA D E +
Sbjct:   273 MLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLF-----SASDYEVA 314

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q5NVP9 MORF4L1 "Mortality factor 4-like protein 1" [Pongo abelii (taxid:9601)]

 Score = 193 (73.0 bits), Expect = 4.8e-15, P = 4.8e-15
 Identities = 45/107 (42%), Positives = 65/107 (60%)

Query:    29 STGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMA--ADVSPSSVYGAEHLLRLFVKLPE 86
             +  E+V G++ YF+  L   LLYK ER QY + +A   D   S VYGA HLLRLFV++  
Sbjct:   213 AVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGA 272

Query:    87 LLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETS 133
             +L +  ++E++L LL + L D LK+L K+ +T F     SA D E +
Sbjct:   273 MLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLF-----SASDYEVA 314

GO:0000724 "double-strand break repair via homologous recombination" evidence=ISS

GO:0016575 "histone deacetylation" evidence=ISS

GO:0016580 "Sin3 complex" evidence=ISS

GO:0035267 "NuA4 histone acetyltransferase complex" evidence=ISS

GO:0043967 "histone H4 acetylation" evidence=ISS

GO:0043968 "histone H2A acetylation" evidence=ISS

RGD|1307938 Morf4l1 "mortality factor 4 like 1" [Rattus norvegicus (taxid:10116)]

 Score = 193 (73.0 bits), Expect = 4.8e-15, P = 4.8e-15
 Identities = 45/107 (42%), Positives = 65/107 (60%)

Query:    29 STGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMA--ADVSPSSVYGAEHLLRLFVKLPE 86
             +  E+V G++ YF+  L   LLYK ER QY + +A   D   S VYGA HLLRLFV++  
Sbjct:   213 AVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGA 272

Query:    87 LLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETS 133
             +L +  ++E++L LL + L D LK+L K+ +T F     SA D E +
Sbjct:   273 MLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLF-----SASDYEVA 314

GO:0000724 "double-strand break repair via homologous recombination" evidence=ISS

GO:0003682 "chromatin binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008283 "cell proliferation" evidence=IEA

GO:0016575 "histone deacetylation" evidence=ISS

GO:0016580 "Sin3 complex" evidence=ISS

GO:0035267 "NuA4 histone acetyltransferase complex" evidence=ISS

GO:0040008 "regulation of growth" evidence=IEA

GO:0043967 "histone H4 acetylation" evidence=ISS

GO:0043968 "histone H2A acetylation" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	140
pfam05712	191	pfam05712, MRG, MRG	1e-34

>gnl|CDD|218713 pfam05712, MRG, MRG

 Score =  118 bits (298), Expect = 1e-34
 Identities = 48/98 (48%), Positives = 63/98 (64%), Gaps = 7/98 (7%)

Query: 32  EIVKGLQCYFDKALPIMLLYKSEREQYED-------SMAADVSPSSVYGAEHLLRLFVKL 84
           E+V GL+ YF+KAL  +LLYK ER QY +       S  +D  PS +YGAEHLLRLFVKL
Sbjct: 91  EVVDGLRIYFNKALGDLLLYKFERLQYLELLKDNLLSAESDKRPSDIYGAEHLLRLFVKL 150

Query: 85  PELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLS 122
           PELL    ++E++L  L   L D L+FL K+   +F+ 
Sbjct: 151 PELLSQTNMDEQSLNRLLKHLEDFLRFLAKNAEEYFVK 188

This family consists of three different eukaryotic proteins (mortality factor 4 (MORF4/MRG15), male-specific lethal 3(MSL-3) and ESA1-associated factor 3(EAF3)). It is thought that the MRG family is involved in transcriptional regulation via histone acetylation. It contains 2 chromo domains and a leucine zipper motif. Length = 191

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	140
PF05712	194	MRG: MRG; InterPro: IPR008676 This family consists	100.0
KOG3001	391	consensus Dosage compensation regulatory complex/h	99.92

>PF05712 MRG: MRG; InterPro: IPR008676 This family consists of three different eukaryotic proteins (mortality factor 4 (MORF4/MRG15), male-specific lethal 3(MSL-3) and ESA1-associated factor 3(EAF3))

Probab=100.00  E-value=1.3e-33  Score=221.82  Aligned_cols=97  Identities=48%  Similarity=0.827  Sum_probs=88.4

Q ss_pred             HHHHHHHHHHHHHHhhhcccccCChhhHHHHHHHHhcC------------CCCCccccHHHHHHHhhhhHHHhhccCCCH
Q 032452           28 DSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAAD------------VSPSSVYGAEHLLRLFVKLPELLVHAKIEE   95 (140)
Q Consensus        28 ~~~~E~~~Gl~~YFn~~Lg~~LLY~~ER~QY~e~~~~~------------~~pS~iYG~~HLLRLfvkLP~ll~~t~~d~   95 (140)
                      +.++|+++||+.|||++||++|||++||+||.+++++.            .+||++||++|||||||+||++++.++||+
T Consensus        85 ~~~~e~~~Gl~~yFn~~L~~~LLY~~Er~Qy~~~~~~~~~~~~~~~~~~~~~ps~~YG~~HLLRL~vkLPell~~~~~~~  164 (194)
T PF05712_consen   85 DLLKEVADGLRDYFNKALGSQLLYKFERPQYDELLKKHATRDDSPPDEPGFRPSDIYGAIHLLRLFVKLPELLSSTNMDE  164 (194)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCCTS-GGGHHHHHHHHHHS---------STTS-HHHC-BHHHHHHHHHHHHHHHCCCGGCH
T ss_pred             HHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHhcccchhccccCCCCCHHhhccHHHHHHHHHHHHHHHhhCCCCH
Confidence            56899999999999999999999999999999998653            599999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhchhhhhc-ccC
Q 032452           96 ETLTLLQHKLVDLLKFLQKHQSTFFL-SRY  124 (140)
Q Consensus        96 ~~~~~l~~~l~~fl~fL~~n~~~~f~-~dY  124 (140)
                      .+++.|..++++|++||++|.++||. ++|
T Consensus       165 ~~~~~l~~~l~~fl~fL~~n~~~~f~~~~y  194 (194)
T PF05712_consen  165 ESINILLEHLQDFLKFLEKNSEEYFSEEDY  194 (194)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTHHHHS-GGGE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence            99999999999999999999999999 666

It is thought that the MRG family is involved in transcriptional regulation via histone acetylation [, ].; GO: 0005634 nucleus; PDB: 2AQL_A 2F5J_A 2LKM_B 2Y0N_D.

>KOG3001 consensus Dosage compensation regulatory complex/histone acetyltransferase complex, subunit MSL-3/MRG15/EAF3, and related CHROMO domain-containing proteins [Chromatin structure and dynamics; Transcription]

Probab=99.92  E-value=3.1e-26  Score=197.17  Aligned_cols=108  Identities=46%  Similarity=0.725  Sum_probs=99.3

Q ss_pred             HHHHHHHHHHHHhhhcccccCChhhHHHHHHHHhcC---CCCCccccHHHHHHHhhhhHHHhhccCCCHHHHHHHHHHHH
Q 032452           30 TGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAAD---VSPSSVYGAEHLLRLFVKLPELLVHAKIEEETLTLLQHKLV  106 (140)
Q Consensus        30 ~~E~~~Gl~~YFn~~Lg~~LLY~~ER~QY~e~~~~~---~~pS~iYG~~HLLRLfvkLP~ll~~t~~d~~~~~~l~~~l~  106 (140)
                      +.+...|++.|||.++|.+|||++||.||.++..+.   .+||++||++||||||||||++|..+.|+..+++.|..+++
T Consensus       279 ~~~~~~g~~~yfn~~lG~~llyk~Er~qy~~~~~~~~~Ds~~s~vyGa~HLlRLfvKLpe~l~~~~~~~~~l~~Ll~~~~  358 (391)
T KOG3001|consen  279 VLEVAAGLKRYFNGQLGVMLLYKFERLQYAEVVAKYPKDSPPSNVYGAEHLLRLFVKLPEILKYTPMDEKSLALLLRHRK  358 (391)
T ss_pred             cccccccceeeecccchhhhhhhhhhHHHHHHHhcCCCCCCcccchhHHHHHHHHhHHHHHHHhccccHHHHHHHHHHHH
Confidence            445559999999999999999999999999999543   35999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhchhhhhc-ccCCCCChHHHhhhcc
Q 032452          107 DLLKFLQKHQSTFFL-SRYHSAEDVETSANKQ  137 (140)
Q Consensus       107 ~fl~fL~~n~~~~f~-~dY~~~~~~Y~~~a~~  137 (140)
                      +|++||.+|.+.||. ++|.+++++|.+.+-+
T Consensus       359 ~flk~L~~~~~~~f~~s~y~~~~~e~~~~~~~  390 (391)
T KOG3001|consen  359 DFLKYLRKNSASFFSSSDYSNASPEYSSSSLP  390 (391)
T ss_pred             HHHHHHHHhccccccccchhhhchhhhhcccC
Confidence            999999999977888 9999999999987643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	140
2aql_A	173	Crystal Structure Of The Mrg15 Mrg Domain Length =		8e-16
2lkm_B	172	Structural Basis For Molecular Interactions Involvi		8e-16
2f5j_A	181	Crystal Structure Of Mrg Domain From Human Mrg15 Le		9e-16
2y0n_A	211	Crystal Structure Of The Complex Between Dosage Com		2e-12

>pdb|2AQL|A Chain A, Crystal Structure Of The Mrg15 Mrg Domain Length = 173

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 45/107 (42%), Positives = 65/107 (60%), Gaps = 7/107 (6%)
Query: 29  STGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMA--ADVSPSSVYGAEHLLRLFVKLPE 86
           +  E+V G++ YF+  L   LLYK ER QY + +A   D   S VYGA HLLRLFV++  
Sbjct: 63  AVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGA 122
Query: 87  LLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETS 133
           +L +  ++E++L LL + L D LK+L K+ +T F     SA D E +
Sbjct: 123 MLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLF-----SASDYEVA 164

>pdb|2LKM|B Chain B, Structural Basis For Molecular Interactions Involving Mrg Domains: Implications In Chromatin Biology Length = 172

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 45/107 (42%), Positives = 65/107 (60%), Gaps = 7/107 (6%)
Query: 29  STGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMA--ADVSPSSVYGAEHLLRLFVKLPE 86
           +  E+V G++ YF+  L   LLYK ER QY + +A   D   S VYGA HLLRLFV++  
Sbjct: 62  AVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGA 121
Query: 87  LLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETS 133
           +L +  ++E++L LL + L D LK+L K+ +T F     SA D E +
Sbjct: 122 MLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLF-----SASDYEVA 163

>pdb|2F5J|A Chain A, Crystal Structure Of Mrg Domain From Human Mrg15 Length = 181

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 45/107 (42%), Positives = 65/107 (60%), Gaps = 7/107 (6%)
Query: 29  STGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMA--ADVSPSSVYGAEHLLRLFVKLPE 86
           +  E+V G++ YF+  L   LLYK ER QY + +A   D   S VYGA HLLRLFV++  
Sbjct: 63  AVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGA 122
Query: 87  LLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVETS 133
           +L +  ++E++L LL + L D LK+L K+ +T F     SA D E +
Sbjct: 123 MLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLF-----SASDYEVA 164

>pdb|2Y0N|A Chain A, Crystal Structure Of The Complex Between Dosage Compensation Factors Msl1 And Msl3 Length = 211

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 12/105 (11%)
Query: 28  DSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAA--DVSPSS----------VYGAE 75
           D   E+V GL+  FD  LP++LLY  E+ QY+   ++  D+ P++          +YGA+
Sbjct: 88  DLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSKYDIPPTTEFDQPPPPSYIYGAQ 147
Query: 76  HLLRLFVKLPELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFF 120
           HLLRLFVKLPE+L      E+ L  L       L+FL ++   FF
Sbjct: 148 HLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFF 192

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	140
2f5j_A	181	Mortality factor 4-like protein 1; MRG fold, mainl	6e-30
2y0n_A	211	MALE-specific lethal 3 homolog; transcription, chr	4e-27

>2f5j_A Mortality factor 4-like protein 1; MRG fold, mainly A-helix, gene regulation; 2.20A {Homo sapiens} PDB: 2aql_A 2lkm_B Length = 181

 Score =  105 bits (264), Expect = 6e-30
 Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)

Query: 28  DSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMA--ADVSPSSVYGAEHLLRLFVKLP 85
            +  E+V G++ YF+  L   LLYK ER QY + +A   D   S VYGA HLLRLFV++ 
Sbjct: 62  YAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIG 121

Query: 86  ELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFF-LSRYHSA 127
            +L +  ++E++L LL + L D LK+L K+ +T F  S Y  A
Sbjct: 122 AMLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLFSASDYEVA 164

>2y0n_A MALE-specific lethal 3 homolog; transcription, chromatin, X chromosome, MSL complex; 3.00A {Homo sapiens} Length = 211

 Score = 99.1 bits (246), Expect = 4e-27
 Identities = 41/116 (35%), Positives = 55/116 (47%), Gaps = 12/116 (10%)

Query: 28  DSTGEIVKGLQCYFDKALPIMLLYKSEREQYED------------SMAADVSPSSVYGAE 75
           D   E+V GL+  FD  LP++LLY  E+ QY+                    PS +YGA+
Sbjct: 88  DLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSKYDIPPTTEFDQPPPPSYIYGAQ 147

Query: 76  HLLRLFVKLPELLVHAKIEEETLTLLQHKLVDLLKFLQKHQSTFFLSRYHSAEDVE 131
           HLLRLFVKLPE+L      E+ L  L       L+FL ++   FF    + A    
Sbjct: 148 HLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFFPESAYVAACEA 203

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	140
2f5j_A	181	Mortality factor 4-like protein 1; MRG fold, mainl	100.0
2y0n_A	211	MALE-specific lethal 3 homolog; transcription, chr	100.0

>2f5j_A Mortality factor 4-like protein 1; MRG fold, mainly A-helix, gene regulation; 2.20A {Homo sapiens} PDB: 2aql_A 2lkm_B

Probab=100.00  E-value=4.7e-40  Score=256.19  Aligned_cols=112  Identities=40%  Similarity=0.611  Sum_probs=102.1

Q ss_pred             hHHHHHHHHHHHHHHhhhcccccCChhhHHHHHHHHhc--CCCCCccccHHHHHHHhhhhHHHhhccCCCHHHHHHHHHH
Q 032452           27 ADSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAA--DVSPSSVYGAEHLLRLFVKLPELLVHAKIEEETLTLLQHK  104 (140)
Q Consensus        27 ~~~~~E~~~Gl~~YFn~~Lg~~LLY~~ER~QY~e~~~~--~~~pS~iYG~~HLLRLfvkLP~ll~~t~~d~~~~~~l~~~  104 (140)
                      .++++|+++||+.|||++||++|||++||+||.+++++  +.+||++||++|||||||+||++++.++||+++++.|..+
T Consensus        61 ~~~~~Ev~~Gl~~YFd~~L~~~LLY~~ER~Qy~~ll~~~p~~~~S~iYGa~HLLRLfvkLPell~~t~~d~~s~~~L~~~  140 (181)
T 2f5j_A           61 EYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLNY  140 (181)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHSCCGGGHHHHHHHHHHSTTCCHHHHCBHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcccccCcHHHHHHHHHHHHhCCCCCHHHHcCHHHHHHHHHHhHHHHhcCCCCHHHHHHHHHH
Confidence            35789999999999999999999999999999999963  4599999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhchhhhhc-ccCCCCChHHHhhhccc
Q 032452          105 LVDLLKFLQKHQSTFFL-SRYHSAEDVETSANKQE  138 (140)
Q Consensus       105 l~~fl~fL~~n~~~~f~-~dY~~~~~~Y~~~a~~~  138 (140)
                      +++|++||++|.++||. ++|++++|+|+++|++.
T Consensus       141 l~~fl~fL~~n~~~~F~~~~Y~~~~~eY~~~~~~~  175 (181)
T 2f5j_A          141 LHDFLKYLAKNSATLFSASDYEVAPPEYHRKAVLE  175 (181)
T ss_dssp             HHHHHHHHHHTHHHHCCGGGEEECCHHHHC-----
T ss_pred             HHHHHHHHHHHHHHhCCHHhcCCCCHHHHHHHhhh
Confidence            99999999999999996 99999999999999875

>2y0n_A MALE-specific lethal 3 homolog; transcription, chromatin, X chromosome, MSL complex; 3.00A {Homo sapiens}

Probab=100.00  E-value=1.7e-37  Score=246.30  Aligned_cols=109  Identities=40%  Similarity=0.651  Sum_probs=96.1

Q ss_pred             hHHHHHHHHHHHHHHhhhcccccCChhhHHHHHHHHhc------------CCCCCccccHHHHHHHhhhhHHHhhccCCC
Q 032452           27 ADSTGEIVKGLQCYFDKALPIMLLYKSEREQYEDSMAA------------DVSPSSVYGAEHLLRLFVKLPELLVHAKIE   94 (140)
Q Consensus        27 ~~~~~E~~~Gl~~YFn~~Lg~~LLY~~ER~QY~e~~~~------------~~~pS~iYG~~HLLRLfvkLP~ll~~t~~d   94 (140)
                      .++++|+++||+.|||++||++|||++||+||.++++.            +.+||++||++|||||||+||++|+.++||
T Consensus        87 ~~~~~Ev~~GLr~YFd~~L~~~LLY~~ER~Qy~~~~~~~~~~~~~~~~~~~~~~S~iYGa~HLLRLfvkLPelL~~t~~d  166 (211)
T 2y0n_A           87 VDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSKYDIPPTTEFDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFS  166 (211)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSCCGGGHHHHHHHHHC--------CCSCCCCGGGTCCHHHHHHHHHHHHHHHHHSCCC
T ss_pred             HHHHHHHHHHHHHHHHHHcccccCcHHHHHHHHHHHHhhcccCCcccccCCCCHHHHcCHHHHHHHHHHhHHHHhcCCCC
Confidence            45789999999999999999999999999999999842            358999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhchhhhhc-ccCCCCChHHHhhh
Q 032452           95 EETLTLLQHKLVDLLKFLQKHQSTFFL-SRYHSAEDVETSAN  135 (140)
Q Consensus        95 ~~~~~~l~~~l~~fl~fL~~n~~~~f~-~dY~~~~~~Y~~~a  135 (140)
                      +++++.|..++++|++||++|.++||. ++|++++|+|++..
T Consensus       167 ~~s~~~L~~~l~~fl~fL~~n~~~~F~~~~Y~~~~~~~~~~~  208 (211)
T 2y0n_A          167 EKNLKALLKHFDLFLRFLAEYHDDFFPESAYVAACEAHYSTK  208 (211)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTHHHHCCGGGEECC--------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCChhccCCCCHHHHhhc
Confidence            999999999999999999999999997 89999988886653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00