Citrus Sinensis ID: 032561

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------14
Protein Sequence
MASIRSFGKWTVDHQICPQHTTIQAKQAVVSIPISRRAAAILISSLPFSVISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEVYLGFVYIY
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccHHccccccHHHHHHHcccccccccccccccccEEEEEEcccccccccccEEEEEEEEEEccEEEEEccccccccccEEccccEEEEEEEc
Secondary Structure Prediction (SSPRO)
cccEHHcccccccccccccccccccccccccccHcHHHHHHHHHHHHHHHHcccccHHHHHHHccccccHHHccccccccEEEEEEEccccEEEcccEEEEEEEEEEEEEEEEEcHHHHHcccccEEccccEEEEEEc
Coil and Loop (DISEMBL)
masirsfgkwtvdhqicpqhtTIQAKQAVVSIPISRRAAAILISslpfsvislpkcseARERRnkkaipledyhttsdglkyydivegkgpvaqkgstvQVHFDCIFRGITAVSSRESKLLAGNRSIAEVYLGFVYIY
Flexible Loop (DISEMBL)
masirsfgkwtvdhqiCPQHTTIQAKQAVVSIPISRRAAAILisslpfsvislpkcsearerrnkkaipledyhttsdGLKYYDIVEGKGPVAQKGSTVQVHFDCIFRGITAVssreskllagnrsiaevylgfvyIY
Low Complexity Region (SEG)
MASIRSFGKWTVDHQICPQHTTIQAKQAVVSIPISRRAAAILISSLPFSVISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEVYLGFVYIY
Disordered region (IsUnstruct)
*****SFGKWTVDHQICPQHTTIQAKQAVVSIPISRRAAAILISSLPFSVISLPKC***********IPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEVYLGFVYI*
Disordered Region (DISOPRED)
***********************************RRAAAILISSLPFSVIS**********************TTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEVYLGFVYIY
Disordered Region (DISEMBL)
MASIRSFGKWTVDHQICPQHTTIQAKQAVVSIPISRRAAAILISSLPFSVISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEVYLGFVYIY
Disordered Region (DISPRO)
********KWTVDH*******T**AKQAVVSIPISRRAAAILISSLPFSVISLPKCSEARE*RNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEVYLGFVYIY
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASIRSFGKWTVDHQICPQHTTIQAKQAVVSIPISRRAAAILISSLPFSVISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEVYLGFVYIY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	138	2.2.26 [Sep-21-2011]
Q9LM71	232	Peptidyl-prolyl cis-trans	yes	no	0.949	0.564	0.559	4e-35
Q9SR70	230	Peptidyl-prolyl cis-trans	no	no	0.492	0.295	0.397	1e-06

>sp|Q9LM71|FKB18_ARATH Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic OS=Arabidopsis thaliana GN=FKBP18 PE=1 SV=2

 Score =  146 bits (368), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 80/143 (55%), Positives = 102/143 (71%), Gaps = 12/143 (8%)

Query: 1   MASIRSFGKWTVD-HQICPQHTTI-QAKQA-------VVSIPISRRAAAI-LISSLPFS- 49
           MASI S  +W  + H   P+ T+I +A Q+         S+PISRR A+I L+SS+P + 
Sbjct: 1   MASISSLHRWASNQHSRLPRITSISEADQSRPINQVVAFSVPISRRDASIILLSSIPLTS 60

Query: 50  -VISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIFR 108
             +  P  SEARERR++K IPLE+Y T  +GLK+YDI EGKGPVA +GST QVHFDC +R
Sbjct: 61  FFVLTPSSSEARERRSRKVIPLEEYSTGPEGLKFYDIEEGKGPVATEGSTAQVHFDCRYR 120

Query: 109 GITAVSSRESKLLAGNRSIAEVY 131
            ITA+S+RESKLLAGNRSIA+ Y
Sbjct: 121 SITAISTRESKLLAGNRSIAQPY 143

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
Arabidopsis thaliana (taxid: 3702)
EC: 5EC: .EC: 2EC: .EC: 1EC: .EC: 8

>sp|Q9SR70|FK164_ARATH Peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-4 PE=1 SV=1

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 38/68 (55%)

Query: 57  SEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIFRGITAVSSR 116
           S +R       +P  D+ T  +GLKYYDI  G G  A KGS V VH+   ++GIT ++SR
Sbjct: 84  STSRRALRASKLPESDFTTLPNGLKYYDIKVGNGAEAVKGSRVAVHYVAKWKGITFMTSR 143

Query: 117 ESKLLAGN 124
           +   + G 
Sbjct: 144 QGLGVGGG 151

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	138
297745584	222	unnamed protein product [Vitis vinifera]	0.949	0.590	0.661	1e-41
224083348	209	predicted protein [Populus trichocarpa]	0.942	0.622	0.620	1e-40
147815138	682	hypothetical protein VITISV_024651 [Viti	0.949	0.192	0.632	6e-40
449455631	227	PREDICTED: peptidyl-prolyl cis-trans iso	0.840	0.511	0.664	2e-37
359491859	187	PREDICTED: probable FKBP-type peptidyl-p	0.724	0.534	0.762	6e-36
357467145	228	hypothetical protein MTR_3g115970 [Medic	0.746	0.451	0.704	2e-35
255539292	219	FK506 binding protein, putative [Ricinus	0.942	0.593	0.636	8e-35
15218039	232	peptidylprolyl isomerase [Arabidopsis th	0.949	0.564	0.559	3e-33
8886936	233	F2D10.32 [Arabidopsis thaliana]	0.934	0.553	0.560	1e-32
388514903	243	unknown [Lotus japonicus]	0.753	0.427	0.650	1e-32

>gi|297745584|emb|CBI40749.3| unnamed protein product [Vitis vinifera]

 Score =  174 bits (440), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 90/136 (66%), Positives = 106/136 (77%), Gaps = 5/136 (3%)

Query: 1   MASIRSFGKWTVDHQI-CPQHTTIQA---KQAVVSIPISRRAAAILISSLPFSVISLPKC 56
           MASIRS  +W VD+ +  P  + IQ    K  ++ +PISRR A ILIS LPFSVIS P  
Sbjct: 1   MASIRSIHRWDVDNLLLTPTSSAIQTQPPKHVILPMPISRRCA-ILISVLPFSVISQPHS 59

Query: 57  SEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIFRGITAVSSR 116
           S+ARERR KK IPLEDY T+ DGLKYYD+V+G GPVA+KGS+VQVHFDCI+R ITAVSSR
Sbjct: 60  SDARERRTKKNIPLEDYLTSPDGLKYYDVVDGNGPVAEKGSSVQVHFDCIYRSITAVSSR 119

Query: 117 ESKLLAGNRSIAEVYL 132
           ESKLLAGNR IA+ Y+
Sbjct: 120 ESKLLAGNRIIAQPYV 135

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083348|ref|XP_002306991.1| predicted protein [Populus trichocarpa] gi|222856440|gb|EEE93987.1| predicted protein [Populus trichocarpa]

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 85/137 (62%), Positives = 102/137 (74%), Gaps = 7/137 (5%)

Query: 1   MASIRSFGKWTVDHQI------CPQHTTIQAKQAVVSIPISRRAAAILISSLPFSVISLP 54
           MAS RS  KW+    +       P+ T  Q+    +S P SRR A ILIS+LPF++ SLP
Sbjct: 1   MASTRSLDKWSGHRHLQNLAESTPKKTQEQSNHVFLSNPTSRRCA-ILISTLPFTLTSLP 59

Query: 55  KCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIFRGITAVS 114
           + SEARERRNKK IPLEDY T+ DGLKYYD++EGKG  A+KG TVQVHFDC++RGITA+S
Sbjct: 60  QLSEARERRNKKTIPLEDYLTSPDGLKYYDVLEGKGAAAEKGMTVQVHFDCLYRGITAIS 119

Query: 115 SRESKLLAGNRSIAEVY 131
           SRESKLLAGNR IA+ Y
Sbjct: 120 SRESKLLAGNRIIAQPY 136

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147815138|emb|CAN59776.1| hypothetical protein VITISV_024651 [Vitis vinifera]

 Score =  168 bits (426), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 104/136 (76%), Gaps = 5/136 (3%)

Query: 1   MASIRSFGKWTVDHQIC-PQHTTIQA---KQAVVSIPISRRAAAILISSLPFSVISLPKC 56
           MASIR   +W VD+ +  P  + IQ    K  ++ +PI RR A ILIS LPFS+IS P  
Sbjct: 1   MASIRXIHRWDVDNLLLTPTSSAIQTQPPKHVILPMPIXRRCA-ILISVLPFSLISQPHS 59

Query: 57  SEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIFRGITAVSSR 116
           S+ARERR KK IPLEDY T+ DGLKYYD+V+G GPVA+KGS+VQVHFDCI+R ITAVSSR
Sbjct: 60  SDARERRTKKNIPLEDYLTSPDGLKYYDVVBGNGPVAEKGSSVQVHFDCIYRSITAVSSR 119

Query: 117 ESKLLAGNRSIAEVYL 132
           ESKJLAGNR IA+ Y+
Sbjct: 120 ESKJLAGNRIIAQPYV 135

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455631|ref|XP_004145556.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic-like [Cucumis sativus] gi|449530267|ref|XP_004172117.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic-like [Cucumis sativus]

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 101/125 (80%), Gaps = 9/125 (7%)

Query: 14  HQICPQ---HTTIQ----AKQAVVSIPISRRAAAILISSLPFSVISLPKCSEARERRNKK 66
           H++ PQ   H++      A Q   S+PISRR+A ILISSLPF+++S+   S+ARERRNKK
Sbjct: 15  HRLLPQIRSHSSSNQRENASQQEFSLPISRRSA-ILISSLPFTLVSV-SPSKARERRNKK 72

Query: 67  AIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRS 126
            IPLEDY T+ +GLKYYD+ EGKGPVA+KGSTVQVHFDC++RGITAVSSRESKLLAGNR 
Sbjct: 73  TIPLEDYLTSPNGLKYYDVEEGKGPVAEKGSTVQVHFDCLYRGITAVSSRESKLLAGNRV 132

Query: 127 IAEVY 131
           IA+ Y
Sbjct: 133 IAQPY 137

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491859|ref|XP_002273060.2| PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase 1, chloroplastic [Vitis vinifera]

 Score =  155 bits (391), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 77/101 (76%), Positives = 87/101 (86%), Gaps = 1/101 (0%)

Query: 32  IPISRRAAAILISSLPFSVISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGP 91
           +PISRR A ILIS LPFSVIS P  S+ARERR KK IPLEDY T+ DGLKYYD+V+G GP
Sbjct: 1   MPISRRCA-ILISVLPFSVISQPHSSDARERRTKKNIPLEDYLTSPDGLKYYDVVDGNGP 59

Query: 92  VAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEVYL 132
           VA+KGS+VQVHFDCI+R ITAVSSRESKLLAGNR IA+ Y+
Sbjct: 60  VAEKGSSVQVHFDCIYRSITAVSSRESKLLAGNRIIAQPYV 100

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357467145|ref|XP_003603857.1| hypothetical protein MTR_3g115970 [Medicago truncatula] gi|355492905|gb|AES74108.1| hypothetical protein MTR_3g115970 [Medicago truncatula]

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/105 (70%), Positives = 89/105 (84%), Gaps = 2/105 (1%)

Query: 29  VVSIPISRRAAAILISSLPFSVISL--PKCSEARERRNKKAIPLEDYHTTSDGLKYYDIV 86
           VV++  SRR+ AILISSLPF+ + L  P  +EARERR KK IP++DY T+ DGLKYYD +
Sbjct: 39  VVALSQSRRSTAILISSLPFTFVFLSPPPPAEARERRKKKNIPIDDYITSPDGLKYYDFL 98

Query: 87  EGKGPVAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEVY 131
           EGKGP+A+KGSTVQVHFDC++RGITAVSSRESKLLAGNR IA+ Y
Sbjct: 99  EGKGPIAEKGSTVQVHFDCLYRGITAVSSRESKLLAGNRVIAQPY 143

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539292|ref|XP_002510711.1| FK506 binding protein, putative [Ricinus communis] gi|223551412|gb|EEF52898.1| FK506 binding protein, putative [Ricinus communis]

 Score =  151 bits (381), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 84/132 (63%), Positives = 101/132 (76%), Gaps = 2/132 (1%)

Query: 1   MASIRSFGKWTVDH-QICPQHTTIQAKQAVVSIPISRRAAAILISSLPFSVISLPKCSEA 59
           MA   S  +  ++H +I  + +    KQ VVS P SRR A +L SSL  S+IS P+ +E 
Sbjct: 1   MALASSLERGAINHLRIISKQSQEPPKQVVVSTPTSRRCA-VLTSSLSLSLISFPQLAEG 59

Query: 60  RERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIFRGITAVSSRESK 119
           RERRNKK IPLEDY T+ DGLKYYD+VEGKGP+A+KGSTVQVHFDC++RGITAVSSRESK
Sbjct: 60  RERRNKKNIPLEDYLTSPDGLKYYDVVEGKGPIAEKGSTVQVHFDCMYRGITAVSSRESK 119

Query: 120 LLAGNRSIAEVY 131
           LLAGNR IA+ Y
Sbjct: 120 LLAGNRIIAQPY 131

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15218039|ref|NP_173504.1| peptidylprolyl isomerase [Arabidopsis thaliana] gi|18203241|sp|Q9LM71.2|FKB18_ARATH RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic; Short=PPIase FKBP18; AltName: Full=FK506-binding protein 18; Short=AtFKBP18; AltName: Full=Immunophilin FKBP18; AltName: Full=Rotamase; Flags: Precursor gi|26449905|dbj|BAC42074.1| unknown protein [Arabidopsis thaliana] gi|28827556|gb|AAO50622.1| putative FKBP-type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gi|332191905|gb|AEE30026.1| peptidylprolyl isomerase [Arabidopsis thaliana]

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/143 (55%), Positives = 102/143 (71%), Gaps = 12/143 (8%)

Query: 1   MASIRSFGKWTVD-HQICPQHTTI-QAKQA-------VVSIPISRRAAAI-LISSLPFS- 49
           MASI S  +W  + H   P+ T+I +A Q+         S+PISRR A+I L+SS+P + 
Sbjct: 1   MASISSLHRWASNQHSRLPRITSISEADQSRPINQVVAFSVPISRRDASIILLSSIPLTS 60

Query: 50  -VISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIFR 108
             +  P  SEARERR++K IPLE+Y T  +GLK+YDI EGKGPVA +GST QVHFDC +R
Sbjct: 61  FFVLTPSSSEARERRSRKVIPLEEYSTGPEGLKFYDIEEGKGPVATEGSTAQVHFDCRYR 120

Query: 109 GITAVSSRESKLLAGNRSIAEVY 131
            ITA+S+RESKLLAGNRSIA+ Y
Sbjct: 121 SITAISTRESKLLAGNRSIAQPY 143

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|8886936|gb|AAF80622.1|AC069251_15 F2D10.32 [Arabidopsis thaliana]

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 79/141 (56%), Positives = 101/141 (71%), Gaps = 12/141 (8%)

Query: 1   MASIRSFGKWTVD-HQICPQHTTI-QAKQA-------VVSIPISRRAAAI-LISSLPFS- 49
           MASI S  +W  + H   P+ T+I +A Q+         S+PISRR A+I L+SS+P + 
Sbjct: 1   MASISSLHRWASNQHSRLPRITSISEADQSRPINQVVAFSVPISRRDASIILLSSIPLTS 60

Query: 50  -VISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIFR 108
             +  P  SEARERR++K IPLE+Y T  +GLK+YDI EGKGPVA +GST QVHFDC +R
Sbjct: 61  FFVLTPSSSEARERRSRKVIPLEEYSTGPEGLKFYDIEEGKGPVATEGSTAQVHFDCRYR 120

Query: 109 GITAVSSRESKLLAGNRSIAE 129
            ITA+S+RESKLLAGNRSIA+
Sbjct: 121 SITAISTRESKLLAGNRSIAQ 141

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388514903|gb|AFK45513.1| unknown [Lotus japonicus]

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/106 (65%), Positives = 88/106 (83%), Gaps = 2/106 (1%)

Query: 28  AVVSIPISRRAAAILISSLPFSV--ISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDI 85
           A +S   SRR+ A+LIS LP +V  ++ P  + ARERRNKK IP+++Y T+ DGLKYYD+
Sbjct: 53  AALSPSQSRRSTAVLISLLPLTVDWLTTPPPAAARERRNKKNIPIDEYLTSPDGLKYYDL 112

Query: 86  VEGKGPVAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEVY 131
           VEGKG VA+KGSTVQVHFDC++RG+TAVSSRESK+LAGNR+IA+ Y
Sbjct: 113 VEGKGSVAEKGSTVQVHFDCLYRGVTAVSSRESKILAGNRTIAQSY 158

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	138
TAIR|locus:2030502	232	AT1G20810 "AT1G20810" [Arabido	0.949	0.564	0.573	5.2e-33
UNIPROTKB|Q0E4I6	234	Os02g0117600 "Peptidyl-prolyl	0.681	0.401	0.666	6.4e-28
UNIPROTKB|A8JC71	228	FKB16-4 "Peptidyl-prolyl cis-t	0.731	0.442	0.365	6.4e-09
TAIR|locus:2100063	230	AT3G10060 "AT3G10060" [Arabido	0.731	0.439	0.317	9.8e-08

TAIR|locus:2030502 AT1G20810 "AT1G20810" [Arabidopsis thaliana (taxid:3702)]

 Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
 Identities = 82/143 (57%), Positives = 104/143 (72%)

Query:     1 MASIRSFGKWTVD-HQICPQHTTI-QAKQA-----VV--SIPISRR-AAAILISSLPFS- 49
             MASI S  +W  + H   P+ T+I +A Q+     VV  S+PISRR A+ IL+SS+P + 
Sbjct:     1 MASISSLHRWASNQHSRLPRITSISEADQSRPINQVVAFSVPISRRDASIILLSSIPLTS 60

Query:    50 -VISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIFR 108
               +  P  SEARERR++K IPLE+Y T  +GLK+YDI EGKGPVA +GST QVHFDC +R
Sbjct:    61 FFVLTPSSSEARERRSRKVIPLEEYSTGPEGLKFYDIEEGKGPVATEGSTAQVHFDCRYR 120

Query:   109 GITAVSSRESKLLAGNRSIAEVY 131
              ITA+S+RESKLLAGNRSIA+ Y
Sbjct:   121 SITAISTRESKLLAGNRSIAQPY 143

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=IBA

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS;IBA

GO:0005528 "FK506 binding" evidence=ISS;IBA

GO:0006457 "protein folding" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS;IDA

GO:0016020 "membrane" evidence=IBA

GO:0018208 "peptidyl-proline modification" evidence=IBA

GO:0031977 "thylakoid lumen" evidence=IDA

UNIPROTKB|Q0E4I6 Os02g0117600 "Peptidyl-prolyl cis-trans isomerase" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 64/96 (66%), Positives = 75/96 (78%)

Query:    36 RRAAAILISSLPFSVISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQK 95
             RRAAA L+S+  F +   P    AR  R +  + LEDY T+ DGLKYYD+VEGKGP A+K
Sbjct:    53 RRAAAQLLSAAGFLIAVSPPSLAAR--RGRMVVSLEDYVTSPDGLKYYDLVEGKGPTAEK 110

Query:    96 GSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEVY 131
             GSTVQVHFDCI+RGITAVSSRE+KLLAGNRSIA+ Y
Sbjct:   111 GSTVQVHFDCIYRGITAVSSREAKLLAGNRSIAQPY 146

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

UNIPROTKB|A8JC71 FKB16-4 "Peptidyl-prolyl cis-trans isomerase" [Chlamydomonas reinhardtii (taxid:3055)]

 Score = 134 (52.2 bits), Expect = 6.4e-09, P = 6.4e-09
 Identities = 38/104 (36%), Positives = 53/104 (50%)

Query:    21 TTIQAKQA-VVSIPISRRAAAILISSLPFSVISLPKCSEARERRNKKAIPLEDYHTTSDG 79
             TT +A  A  VS+  +    A    +L ++   L    E   RR K  IP ED+     G
Sbjct:    45 TTRRALLAGAVSLAAAGAVQAPPAQALEYTTDPLNYKKELARRRRK--IPEEDFKEGERG 102

Query:    80 LKYYDIVEGKGPVAQKGSTVQVHFDCIFRGITAVSSRESKLLAG 123
             +KYYDI EG G  A+ G  V VH+D  +R IT ++SR+   + G
Sbjct:   103 IKYYDITEGGGAEARVGERVAVHYDVKWRNITFMTSRQGMGVTG 146

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

TAIR|locus:2100063 AT3G10060 "AT3G10060" [Arabidopsis thaliana (taxid:3702)]

 Score = 124 (48.7 bits), Expect = 9.8e-08, P = 9.8e-08
 Identities = 34/107 (31%), Positives = 53/107 (49%)

Query:    23 IQAKQAVVSIPISRRAAAILISSLPFSVISLPKCSEAR----ERRNKKA--IPLEDYHTT 76
             I+ +  +   P+S     +L+  L  +   +     A      RR  +A  +P  D+ T 
Sbjct:    44 IRTETVLPPAPVSCEGRRVLLGCLLATASGILSTGSAEAVSTSRRALRASKLPESDFTTL 103

Query:    77 SDGLKYYDIVEGKGPVAQKGSTVQVHFDCIFRGITAVSSRESKLLAG 123
              +GLKYYDI  G G  A KGS V VH+   ++GIT ++SR+   + G
Sbjct:   104 PNGLKYYDIKVGNGAEAVKGSRVAVHYVAKWKGITFMTSRQGLGVGG 150


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.134   0.391    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      138       138   0.00091  102 3  11 22  0.40    31
                                                     30  0.45    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  568 (60 KB)
  Total size of DFA:  130 KB (2083 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.08u 0.11s 13.19t   Elapsed:  00:00:01
  Total cpu time:  13.09u 0.11s 13.20t   Elapsed:  00:00:01
  Start:  Thu May  9 16:17:40 2013   End:  Thu May  9 16:17:41 2013

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=IBA

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS;IBA

GO:0005528 "FK506 binding" evidence=ISS;IBA

GO:0005634 "nucleus" evidence=ISM

GO:0006457 "protein folding" evidence=IEA

GO:0018208 "peptidyl-proline modification" evidence=IBA

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS;IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0042631 "cellular response to water deprivation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00002914001 RecName- Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; (222 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	138
COG0545	205	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans	3e-05

>gnl|CDD|223619 COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 41.6 bits (98), Expect = 3e-05
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)

Query: 64  NKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHF 103
           N K   ++   T   GL+Y  +  G G   +KG TV VH+
Sbjct: 90  NAKEKGVK---TLPSGLQYKVLKAGDGAAPKKGDTVTVHY 126

Length = 205

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	138
COG0545	205	FkpA FKBP-type peptidyl-prolyl cis-trans isomerase	99.61
KOG0544	108	consensus FKBP-type peptidyl-prolyl cis-trans isom	99.42
PRK11570	206	peptidyl-prolyl cis-trans isomerase; Provisional	99.37
PRK10902	269	FKBP-type peptidyl-prolyl cis-trans isomerase; Pro	99.19
KOG0552	226	consensus FKBP-type peptidyl-prolyl cis-trans isom	99.14
TIGR03516	177	ppisom_GldI peptidyl-prolyl isomerase, gliding mot	99.07
KOG0549	188	consensus FKBP-type peptidyl-prolyl cis-trans isom	98.87
PF00254	94	FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomer	98.15
KOG0543	397	consensus FKBP-type peptidyl-prolyl cis-trans isom	97.85
PRK15095	156	FKBP-type peptidyl-prolyl cis-trans isomerase; Pro	97.05
KOG0543	397	consensus FKBP-type peptidyl-prolyl cis-trans isom	96.03
COG1047	174	SlpA FKBP-type peptidyl-prolyl cis-trans isomerase	94.76
KOG0545	329	consensus Aryl-hydrocarbon receptor-interacting pr	94.7
PRK10737	196	FKBP-type peptidyl-prolyl cis-trans isomerase; Pro	93.57
TIGR00115	408	tig trigger factor. Trigger factor is a ribosome-a	89.36
PRK01490	435	tig trigger factor; Provisional	88.38

>COG0545 FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]

Probab=99.61  E-value=1.4e-15  Score=122.28  Aligned_cols=63  Identities=25%  Similarity=0.287  Sum_probs=57.2

Q ss_pred             ccCCCCCCCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           64 NKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        64 ~~~~~p~~~~~t~psGL~y~dlk~G~G~~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      ..+.....+++++++||+|.+++.|+|+.|++|++|.|||+|+| ||++||||++|+         +|++|.+
T Consensus        87 ~~~~~k~~~v~~~~sgl~y~~~~~G~G~~~~~~~~V~vhY~G~l~~G~vFDsS~~rg---------~p~~f~l  150 (205)
T COG0545          87 LEKNAKEKGVKTLPSGLQYKVLKAGDGAAPKKGDTVTVHYTGTLIDGTVFDSSYDRG---------QPAEFPL  150 (205)
T ss_pred             HhhhcccCCceECCCCcEEEEEeccCCCCCCCCCEEEEEEEEecCCCCccccccccC---------CCceeec
Confidence            33445567889999999999999999999999999999999999 999999999996         8999976

>KOG0544 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=99.42  E-value=4.2e-13  Score=97.62  Aligned_cols=48  Identities=29%  Similarity=0.393  Sum_probs=45.3

Q ss_pred             CcEEEEeecCCCCC-CCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           79 GLKYYDIVEGKGPV-AQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        79 GL~y~dlk~G~G~~-p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      |+...+|.+|+|.. |++||+|+|||+|.| ||++||||++|+         .||.|.|
T Consensus         2 Gv~~~~i~~Gdg~tfpK~Gqtvt~hYtg~L~dG~kfDSs~dr~---------kPfkf~I   51 (108)
T KOG0544|consen    2 GVEKQVISPGDGRTFPKKGQTVTVHYTGTLQDGKKFDSSRDRG---------KPFKFKI   51 (108)
T ss_pred             CceeEEeeCCCCcccCCCCCEEEEEEEeEecCCcEeecccccC---------CCeeEEe
Confidence            78999999999965 999999999999999 999999999996         7999987

>PRK11570 peptidyl-prolyl cis-trans isomerase; Provisional

Probab=99.37  E-value=2.1e-12  Score=103.38  Aligned_cols=59  Identities=24%  Similarity=0.295  Sum_probs=54.5

Q ss_pred             CCCCCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           68 IPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        68 ~p~~~~~t~psGL~y~dlk~G~G~~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      ...++++++++||+|+++++|+|..|+.||.|.|||+|++ ||++||||+++.         +|++|.+
T Consensus        92 ~k~~gv~~t~sGl~y~vi~~G~G~~p~~~d~V~v~Y~g~l~dG~vfdss~~~g---------~P~~f~l  151 (206)
T PRK11570         92 AKKEGVNSTESGLQFRVLTQGEGAIPARTDRVRVHYTGKLIDGTVFDSSVARG---------EPAEFPV  151 (206)
T ss_pred             hhcCCcEECCCCcEEEEEeCCCCCCCCCCCEEEEEEEEEECCCCEEEeccCCC---------CCeEEEe
Confidence            3467899999999999999999999999999999999999 999999999874         7999986

>PRK10902 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional

Probab=99.19  E-value=5.5e-11  Score=98.84  Aligned_cols=59  Identities=25%  Similarity=0.207  Sum_probs=53.6

Q ss_pred             CCCCCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           68 IPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        68 ~p~~~~~t~psGL~y~dlk~G~G~~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      ...++++++++||+|.++++|+|..|+.||.|.|||.|++ ||++||||+++.         +|++|.+
T Consensus       136 ~k~~gv~~t~sGl~y~Vi~~G~G~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g---------~p~~f~l  195 (269)
T PRK10902        136 AKEKGVKTTSTGLLYKVEKEGTGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRG---------EPLSFRL  195 (269)
T ss_pred             ccCCCcEECCCccEEEEEeCCCCCCCCCCCEEEEEEEEEeCCCCEeeccccCC---------CceEEec
Confidence            4557899999999999999999999999999999999999 999999999874         6888865

>KOG0552 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=99.14  E-value=7.6e-11  Score=96.30  Aligned_cols=45  Identities=33%  Similarity=0.473  Sum_probs=43.0

Q ss_pred             eeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEe--CCeEeeecccc
Q 032561           74 HTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF--RGITAVSSRES  118 (138)
Q Consensus        74 ~t~psGL~y~dlk~G~G~~p~~Gd~V~VhY~G~l--dG~~FDSS~~r  118 (138)
                      .++++||+|+|++.|+|+.|++|++|.|||+|+|  +|++||++...
T Consensus       116 ~tl~~Gl~y~D~~vG~G~~a~~G~rV~v~Y~Gkl~~~GkvFd~~~~~  162 (226)
T KOG0552|consen  116 RTLPGGLRYEDLRVGSGPSAKKGKRVSVRYIGKLKGNGKVFDSNFGG  162 (226)
T ss_pred             eecCCCcEEEEEEecCCCCCCCCCEEEEEEEEEecCCCeEeecccCC
Confidence            5789999999999999999999999999999999  99999999876

>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated

Probab=99.07  E-value=6.1e-10  Score=87.37  Aligned_cols=57  Identities=25%  Similarity=0.314  Sum_probs=50.6

Q ss_pred             CCCCceeCCCCcEEEEeec--CCCCCCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           69 PLEDYHTTSDGLKYYDIVE--GKGPVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        69 p~~~~~t~psGL~y~dlk~--G~G~~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      +...+.++++|++|.++++  |+|..|++||.|.+||+|++ ||++|||+++.          +|+.|.+
T Consensus        60 ~~~~~~~t~sGl~Y~v~~~~~g~g~~p~~gd~V~v~Y~~~~~dG~v~~ss~~~----------~P~~f~v  119 (177)
T TIGR03516        60 SIVKYETSQNGFWYYYNQKDTGEGTTPEFGDLVTFEYDIRALDGDVIYSEEEL----------GPQTYKV  119 (177)
T ss_pred             CCCCceECCCccEEEEEEecCCCCCcCCCCCEEEEEEEEEeCCCCEEEeCCCC----------CCEEEEe
Confidence            4577889999999998876  77788999999999999999 99999999875          5888876

Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.

>KOG0549 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=98.87  E-value=3.4e-09  Score=84.50  Aligned_cols=49  Identities=22%  Similarity=0.155  Sum_probs=41.4

Q ss_pred             CCCCcEEEEeecCCCCCCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           76 TSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        76 ~psGL~y~dlk~G~G~~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      ++-|+.++  .+.+..+.++||.+.+||+|.+ ||++||||+.|+         +||+|++
T Consensus        70 l~I~v~~~--p~~C~~kak~GD~l~~HY~g~leDGt~fdSS~~rg---------~P~~f~L  119 (188)
T KOG0549|consen   70 LQIGVLKK--PEECPEKAKKGDTLHVHYTGSLEDGTKFDSSYSRG---------APFTFTL  119 (188)
T ss_pred             eeEEEEEC--CccccccccCCCEEEEEEEEEecCCCEEeeeccCC---------CCEEEEe
Confidence            44455555  3348888999999999999999 999999999996         7999987

>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5

Probab=98.15  E-value=3.8e-06  Score=57.66  Aligned_cols=35  Identities=23%  Similarity=0.265  Sum_probs=31.2

Q ss_pred             CCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           92 VAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        92 ~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      .|+.||+|.+||.+++ ||++||++++..         +|++|.+
T Consensus         4 ~~~~gd~V~i~y~~~~~~g~~~~~~~~~~---------~~~~~~~   39 (94)
T PF00254_consen    4 TPKEGDTVTIHYTGRLEDGKVFDSSYQEG---------EPFEFRL   39 (94)
T ss_dssp             SBSTTSEEEEEEEEEETTSEEEEETTTTT---------SEEEEET
T ss_pred             cCCCCCEEEEEEEEEECCCcEEEEeeecC---------cceeeee
Confidence            4999999999999999 999999997754         6999874

2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....

>KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=97.85  E-value=1.4e-05  Score=70.14  Aligned_cols=32  Identities=34%  Similarity=0.536  Sum_probs=29.9

Q ss_pred             ecCCCCC-CCCCCEEEEEEEEEe-CCeEeeeccc
Q 032561           86 VEGKGPV-AQKGSTVQVHFDCIF-RGITAVSSRE  117 (138)
Q Consensus        86 k~G~G~~-p~~Gd~V~VhY~G~l-dG~~FDSS~~  117 (138)
                      ++|+|.+ |..||+|.|||+|+| ||+.||||++
T Consensus         1 ~eg~g~~~p~~g~~v~~hytg~l~dgt~fdss~d   34 (397)
T KOG0543|consen    1 KEGTGTETPMTGDKVEVHYTGTLLDGTKFDSSRD   34 (397)
T ss_pred             CCCCCccCCCCCceeEEEEeEEecCCeecccccC
Confidence            4788965 999999999999999 9999999998

>PRK15095 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional

Probab=97.05  E-value=0.00077  Score=51.88  Aligned_cols=27  Identities=41%  Similarity=0.487  Sum_probs=24.7

Q ss_pred             CCCCCCEEEEEEEEEe-CCeEeeecccc
Q 032561           92 VAQKGSTVQVHFDCIF-RGITAVSSRES  118 (138)
Q Consensus        92 ~p~~Gd~V~VhY~G~l-dG~~FDSS~~r  118 (138)
                      .+++|+.|.+||++++ ||++||||+++
T Consensus         4 ~i~~~~~V~v~Y~~~~~dG~v~dst~~~   31 (156)
T PRK15095          4 SVQSNSAVLVHFTLKLDDGSTAESTRNN   31 (156)
T ss_pred             ccCCCCEEEEEEEEEeCCCCEEEECCCC
Confidence            4789999999999999 99999999863

>KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=96.03  E-value=0.019  Score=50.71  Aligned_cols=41  Identities=27%  Similarity=0.370  Sum_probs=36.0

Q ss_pred             CCCcEEEEeecCCC--CCCCCCCEEEEEEEEEe-CCeEeeecccc
Q 032561           77 SDGLKYYDIVEGKG--PVAQKGSTVQVHFDCIF-RGITAVSSRES  118 (138)
Q Consensus        77 psGL~y~dlk~G~G--~~p~~Gd~V~VhY~G~l-dG~~FDSS~~r  118 (138)
                      +.||...+|++|.|  ..|.+|..|.|||.|++ |+ +||++.-+
T Consensus        83 Dg~iiKriir~G~gd~~~P~~g~~V~v~~~G~~~~~-~f~~~~~~  126 (397)
T KOG0543|consen   83 DGGIIKRIIREGEGDYSRPNKGAVVKVHLEGELEDG-VFDQRELR  126 (397)
T ss_pred             CCceEEeeeecCCCCCCCCCCCcEEEEEEEEEECCc-ceeccccc
Confidence            78999999999999  56999999999999999 55 99977543

>COG1047 SlpA FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones]

Probab=94.76  E-value=0.039  Score=43.85  Aligned_cols=25  Identities=24%  Similarity=0.418  Sum_probs=23.5

Q ss_pred             CCCCCEEEEEEEEEe-CCeEeeeccc
Q 032561           93 AQKGSTVQVHFDCIF-RGITAVSSRE  117 (138)
Q Consensus        93 p~~Gd~V~VhY~G~l-dG~~FDSS~~  117 (138)
                      ..+|+.|.+||++++ ||++||||.+
T Consensus         3 i~k~~~V~i~Y~~~~~dg~v~Dtt~e   28 (174)
T COG1047           3 IEKGDVVSLHYTLKVEDGEVVDTTDE   28 (174)
T ss_pred             ccCCCEEEEEEEEEecCCcEEEcccc
Confidence            678999999999999 9999999977

>KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones]

Probab=94.70  E-value=0.027  Score=48.02  Aligned_cols=50  Identities=20%  Similarity=0.237  Sum_probs=43.0

Q ss_pred             CCCcEEEEeecCCCCC--CCCCCEEEEEEEEEe---CCeEeeeccccccccCCccccccEEEEE
Q 032561           77 SDGLKYYDIVEGKGPV--AQKGSTVQVHFDCIF---RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        77 psGL~y~dlk~G~G~~--p~~Gd~V~VhY~G~l---dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      -.||+..+|..|+|+-  -.+|..|..||.-..   .++++|.||+..         .|+++.+
T Consensus         9 ~~gv~Kril~~G~g~l~e~~dGTrv~FHfrtl~~~e~~tviDDsRk~g---------kPmeiii   63 (329)
T KOG0545|consen    9 VEGVKKRILHGGTGELPEFIDGTRVIFHFRTLKCDEERTVIDDSRKVG---------KPMEIII   63 (329)
T ss_pred             chhhhHhhccCCCccCccccCCceEEEEEEecccCcccccccchhhcC---------CCeEEee
Confidence            3599999999999975  689999999999987   567999999874         7998765

>PRK10737 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional

Probab=93.57  E-value=0.099  Score=42.05  Aligned_cols=26  Identities=19%  Similarity=0.184  Sum_probs=23.5

Q ss_pred             CCCCCEEEEEEEEEe-CCeEeeecccc
Q 032561           93 AQKGSTVQVHFDCIF-RGITAVSSRES  118 (138)
Q Consensus        93 p~~Gd~V~VhY~G~l-dG~~FDSS~~r  118 (138)
                      +++++.|++||+.++ ||.+||+|+..
T Consensus         3 I~~~~vV~l~Y~l~~~dG~v~dst~~~   29 (196)
T PRK10737          3 VAKDLVVSLAYQVRTEDGVLVDESPVS   29 (196)
T ss_pred             cCCCCEEEEEEEEEeCCCCEEEecCCC
Confidence            578999999999999 99999999753

>TIGR00115 tig trigger factor

Probab=89.36  E-value=0.69  Score=39.78  Aligned_cols=25  Identities=24%  Similarity=0.460  Sum_probs=22.2

Q ss_pred             CCCCCCEEEEEEEEEeCCeEeeecc
Q 032561           92 VAQKGSTVQVHFDCIFRGITAVSSR  116 (138)
Q Consensus        92 ~p~~Gd~V~VhY~G~ldG~~FDSS~  116 (138)
                      .++.||.|.++|+|+.||..|+++.
T Consensus       146 ~~~~gD~V~v~~~~~~dg~~~~~~~  170 (408)
T TIGR00115       146 AAEKGDRVTIDFEGFIDGEAFEGGK  170 (408)
T ss_pred             ccCCCCEEEEEEEEEECCEECcCCC
Confidence            4789999999999988999999764

Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.

>PRK01490 tig trigger factor; Provisional

Probab=88.38  E-value=0.88  Score=39.50  Aligned_cols=25  Identities=20%  Similarity=0.282  Sum_probs=22.1

Q ss_pred             CCCCCCEEEEEEEEEeCCeEeeecc
Q 032561           92 VAQKGSTVQVHFDCIFRGITAVSSR  116 (138)
Q Consensus        92 ~p~~Gd~V~VhY~G~ldG~~FDSS~  116 (138)
                      .++.||.|.++|+|..||..|+++.
T Consensus       157 ~~~~gD~V~vd~~~~~~g~~~~~~~  181 (435)
T PRK01490        157 PAENGDRVTIDFVGSIDGEEFEGGK  181 (435)
T ss_pred             cCCCCCEEEEEEEEEECCEECcCCC
Confidence            4799999999999999999998653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	138
3uf8_A	209	Ubiquitin-like protein SMT3, peptidyl-prolyl CIS-	4e-07
1u79_A	129	FKBP-type peptidyl-prolyl CIS-trans isomerase 3; T	5e-07
2y78_A	133	Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase,	1e-06
3b7x_A	134	FK506-binding protein 6; isomerase, repeat, rotama	2e-06
2f4e_A	180	ATFKBP42; FKBP-like, alpha-beta, signaling protein	3e-06
3oe2_A	219	Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase,	8e-06
1fd9_A	213	Protein (macrophage infectivity potentiator prote;	2e-05
1q6h_A	224	FKBP-type peptidyl-prolyl CIS-trans isomerase FKP;	3e-05
1yat_A	113	FK506 binding protein; HET: FK5; 2.50A {Saccharomy	6e-05
2lgo_A	130	FKBP; infectious disease, isomerase, giardiasis, s	9e-05
3o5q_A	128	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	3e-04
3o5e_A	144	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	4e-04
1jvw_A	167	Macrophage infectivity potentiator; chagas disease	5e-04
2vn1_A	129	70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR	6e-04
1r9h_A	135	FKB-6, FK506 binding protein family; structural ge	6e-04
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	6e-04

>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 1euv_B 3v60_A 3v61_A 3v62_A* Length = 209

 Score = 46.3 bits (110), Expect = 4e-07
 Identities = 17/45 (37%), Positives = 22/45 (48%)

Query: 58  EARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVH 102
                 +++ I      TT  GLKY D+ EG G  A+ G TV VH
Sbjct: 84  NDIIEAHREQIGGSTVVTTESGLKYEDLTEGSGAEARAGQTVSVH 128

>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A Length = 129

 Score = 44.7 bits (106), Expect = 5e-07
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 71  EDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVH 102
            ++  +  GL + D V G GP A KG  ++ H
Sbjct: 5   CEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAH 36

>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A* Length = 133

 Score = 43.8 bits (104), Expect = 1e-06
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 3/39 (7%)

Query: 64  NKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVH 102
                      TT  GLKY D+ EG G  A+ G TV VH
Sbjct: 17  RGSH---MTVVTTESGLKYEDLTEGSGAEARAGQTVSVH 52

>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens} Length = 134

 Score = 43.4 bits (103), Expect = 2e-06
 Identities = 9/50 (18%), Positives = 20/50 (40%), Gaps = 4/50 (8%)

Query: 54  PKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHF 103
                  ER +++ + +    +   G+    I EG G +    ++V V +
Sbjct: 6   APGQSLYERLSQRMLDI----SGDRGVLKDVIREGAGDLVAPDASVLVKY 51

>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana} Length = 180

 Score = 43.7 bits (103), Expect = 3e-06
 Identities = 8/33 (24%), Positives = 13/33 (39%)

Query: 71  EDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHF 103
            +     + +    I EG G    K ST  +H+
Sbjct: 42  SEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHY 74

>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} Length = 219

 Score = 42.4 bits (100), Expect = 8e-06
 Identities = 8/39 (20%), Positives = 13/39 (33%), Gaps = 3/39 (7%)

Query: 64  NKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVH 102
            K           +DG+   ++  G GP       V+V 
Sbjct: 106 EKAK---PGVKELADGILMTELTPGTGPKPDANGRVEVR 141

>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A* Length = 213

 Score = 41.2 bits (97), Expect = 2e-05
 Identities = 12/39 (30%), Positives = 13/39 (33%), Gaps = 3/39 (7%)

Query: 64  NKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVH 102
           NK             GL+Y  I  G G    K  TV V 
Sbjct: 95  NKNK---PGVVVLPSGLQYKVINSGNGVKPGKSDTVTVE 130

>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A Length = 224

 Score = 40.9 bits (96), Expect = 3e-05
 Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 3/39 (7%)

Query: 64  NKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVH 102
             K    +   T+S GL Y  +  GKG   +   TV V+
Sbjct: 110 FAKE---KGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVN 145

>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1 Length = 113

 Score = 38.7 bits (91), Expect = 6e-05
 Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 1/30 (3%)

Query: 75  TTSDGLKYYDIVEGKGP-VAQKGSTVQVHF 103
                +K   I  G G    + G  V +H+
Sbjct: 3   VIEGNVKIDRISPGDGATFPKTGDLVTIHY 32

>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia} Length = 130

 Score = 38.8 bits (91), Expect = 9e-05
 Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%)

Query: 71  EDYHTTSDGLKYYDIVEGKGPV-AQKGSTVQVHF 103
           +   + S  L+   +  G G    Q G  V VH+
Sbjct: 17  QGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHY 50

>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A Length = 128

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 7/30 (23%), Positives = 9/30 (30%), Gaps = 1/30 (3%)

Query: 75  TTSDGLKYYDIVEGKGPVA-QKGSTVQVHF 103
               G+       G G      G  V VH+
Sbjct: 16  KKDRGVLKIVKRVGNGEETPMIGDKVYVHY 45

>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A Length = 144

 Score = 36.9 bits (86), Expect = 4e-04
 Identities = 7/30 (23%), Positives = 9/30 (30%), Gaps = 1/30 (3%)

Query: 75  TTSDGLKYYDIVEGKGPVA-QKGSTVQVHF 103
               G+       G G      G  V VH+
Sbjct: 32  KKDRGVLKIVKRVGNGEETPMIGDKVYVHY 61

>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1 Length = 167

 Score = 37.0 bits (86), Expect = 5e-04
 Identities = 9/41 (21%), Positives = 12/41 (29%), Gaps = 4/41 (9%)

Query: 64  NKKAIPLEDYHTTSDGLKYYDIVEGKGPVA-QKGSTVQVHF 103
                   D      GL +  I  G G  A       +VH+
Sbjct: 26  KAAQ---PDAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHY 63

>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A Length = 129

 Score = 36.5 bits (85), Expect = 6e-04
 Identities = 8/32 (25%), Positives = 16/32 (50%), Gaps = 3/32 (9%)

Query: 75  TTSDGLKYYDIVEG---KGPVAQKGSTVQVHF 103
           T   G+    + +G   +  + +KG+ V VH+
Sbjct: 13  TADGGVIKTILKKGDEGEENIPKKGNEVTVHY 44

>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1 Length = 135

 Score = 36.5 bits (85), Expect = 6e-04
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 75  TTSDGLKYYDIVEGKGPV-AQKGSTVQVHF 103
               G+      EG+G V    G+TV+VH+
Sbjct: 11  KKDGGVLKLIKKEGQGVVKPTTGTTVKVHY 40

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A Length = 356

 Score = 37.5 bits (87), Expect = 6e-04
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 71  EDYHTTSDGLKYYDIVEGKG-PVAQKGSTVQVHF 103
           E+      GLK   + EG+G    + G  V+VH+
Sbjct: 4   EENEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHY 37

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	138
2lkn_A	165	AH receptor-interacting protein; FKBP-type domain,	99.42
1u79_A	129	FKBP-type peptidyl-prolyl CIS-trans isomerase 3; T	99.38
1jvw_A	167	Macrophage infectivity potentiator; chagas disease	99.33
1fd9_A	213	Protein (macrophage infectivity potentiator prote;	99.32
2y78_A	133	Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase,	99.31
1q6h_A	224	FKBP-type peptidyl-prolyl CIS-trans isomerase FKP;	99.29
1yat_A	113	FK506 binding protein; HET: FK5; 2.50A {Saccharomy	99.29
2lgo_A	130	FKBP; infectious disease, isomerase, giardiasis, s	99.27
3oe2_A	219	Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase,	99.23
3kz7_A	119	FK506-binding protein 3; FKPB ppiase rapamycin, is	99.22
2f4e_A	180	ATFKBP42; FKBP-like, alpha-beta, signaling protein	99.21
3uf8_A	209	Ubiquitin-like protein SMT3, peptidyl-prolyl CIS-	99.2
2ppn_A	107	FK506-binding protein 1A; high resolution protein	99.17
3o5e_A	144	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	99.16
3o5q_A	128	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	99.16
1r9h_A	135	FKB-6, FK506 binding protein family; structural ge	99.15
3b7x_A	134	FK506-binding protein 6; isomerase, repeat, rotama	99.11
4dip_A	125	Peptidyl-prolyl CIS-trans isomerase FKBP14; struct	99.08
2vn1_A	129	70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR	99.06
2if4_A	338	ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha,	99.06
2jwx_A	157	FKBP38NTD, FK506-binding protein 8 variant; apopto	99.04
2awg_A	118	38 kDa FK-506 binding protein; FKBP-type, ppiase,	99.02
2d9f_A	135	FK506-binding protein 8 variant; FKBP, rapamycin,	99.0
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	98.98
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	98.93
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	98.87
1p5q_A	336	FKBP52, FK506-binding protein 4; isomerase; 2.80A	98.63
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	98.58
2pbc_A	102	FK506-binding protein 2; endoplasmic reticulum, is	98.49
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	98.22
4dt4_A	169	FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer;	97.97
1hxv_A	113	Trigger factor; FKBP fold, ppiase, chaperone; NMR	97.91
3pr9_A	157	FKBP-type peptidyl-prolyl CIS-trans isomerase; FKB	97.89
1ix5_A	151	FKBP; ppiase, isomerase; NMR {Methanothermococcust	97.69
3prb_A	231	FKBP-type peptidyl-prolyl CIS-trans isomerase; cha	97.69
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	97.66
2kr7_A	151	FKBP-type peptidyl-prolyl CIS-trans isomerase SLY;	96.78
2kfw_A	196	FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD	96.68
2k8i_A	171	SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase,	96.59
3cgm_A	158	SLYD, peptidyl-prolyl CIS-trans isomerase; chapero	95.97
1w26_A	432	Trigger factor, TF; chaperone, protein folding, ri	95.91
1t11_A	392	Trigger factor, TF; helix-turn-helix, four-helix-b	95.65
3gty_X	433	Trigger factor, TF; chaperone-client complex, cell	83.87

>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}

Probab=99.42  E-value=6.4e-14  Score=107.81  Aligned_cols=52  Identities=23%  Similarity=0.383  Sum_probs=47.0

Q ss_pred             eCCCCcEEEEeecCCCCCC--CCCCEEEEEEEEEe-C--CeEeeeccccccccCCccccccEEEEE
Q 032561           75 TTSDGLKYYDIVEGKGPVA--QKGSTVQVHFDCIF-R--GITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        75 t~psGL~y~dlk~G~G~~p--~~Gd~V~VhY~G~l-d--G~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      ++.+||+|+++++|+|..|  ++|++|.|||+|+| |  |++||||++|+         +||+|.+
T Consensus         7 ~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg---------~P~~f~l   63 (165)
T 2lkn_A            7 LREDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARG---------KPMELII   63 (165)
T ss_dssp             HHTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTTTT---------CCEEEES
T ss_pred             ccCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEecccCC---------CCEEEEe
Confidence            4689999999999999764  68999999999999 5  99999999986         7999986

>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A

Probab=99.38  E-value=6.1e-13  Score=96.64  Aligned_cols=57  Identities=25%  Similarity=0.327  Sum_probs=51.5

Q ss_pred             CCCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           70 LEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        70 ~~~~~t~psGL~y~dlk~G~G~~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      ..+++++++||+|+++++|+|..+++||.|.|||+|++ ||++||+|+++.         +|++|.+
T Consensus         4 ~~~~~~~~~Gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~---------~p~~f~l   61 (129)
T 1u79_A            4 SCEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRG---------KPLTFRI   61 (129)
T ss_dssp             -CCCEECTTSCEEEEEECCSSCBCCTTCEEEEEEEEECTTSCEEEEHHHHT---------SCEEEET
T ss_pred             CCccEECCCCeEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCEEEecCCCC---------CCEEEEe
Confidence            35788999999999999999999999999999999999 999999998763         6888874

>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1

Probab=99.33  E-value=1.1e-12  Score=100.40  Aligned_cols=57  Identities=23%  Similarity=0.211  Sum_probs=52.0

Q ss_pred             CCCceeCCCCcEEEEeecCCCCC-CCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           70 LEDYHTTSDGLKYYDIVEGKGPV-AQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        70 ~~~~~t~psGL~y~dlk~G~G~~-p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      ..++.++++||+|+++++|+|.. |+.||.|.|||+|++ ||++||+|+++.         +|++|.+
T Consensus        29 ~~~~~~~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG~~fdss~~~g---------~p~~f~l   87 (167)
T 1jvw_A           29 QPDAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSSRERG---------KPTTFRP   87 (167)
T ss_dssp             STTEEECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTSCEEEEHHHHT---------SCEEECG
T ss_pred             CCCcEECCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCCCEEeeccccC---------CCEEEEe
Confidence            35789999999999999999999 999999999999999 999999998864         6998864

>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*

Probab=99.32  E-value=2.1e-12  Score=102.49  Aligned_cols=57  Identities=23%  Similarity=0.206  Sum_probs=52.6

Q ss_pred             CCCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           70 LEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        70 ~~~~~t~psGL~y~dlk~G~G~~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      ..+++++++||+|+++++|+|..|+.||.|.|||+|++ ||++||+|+++.         +|++|.+
T Consensus        98 ~~~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g---------~p~~f~l  155 (213)
T 1fd9_A           98 KPGVVVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLIDGTVFDSTEKTG---------KPATFQV  155 (213)
T ss_dssp             STTEEECTTSCEEEEEECCCSCCCCTTCEEEEEEEEEETTSCEEEEHHHHC---------SCEEEEG
T ss_pred             cCCcEECCCccEEEEEecCCCccCCCCCEEEEEEEEEECCCCEEeeccccC---------CCEEEEc
Confidence            46789999999999999999999999999999999999 999999999874         6999874

>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*

Probab=99.31  E-value=5.1e-12  Score=92.84  Aligned_cols=56  Identities=34%  Similarity=0.493  Sum_probs=51.2

Q ss_pred             CCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           71 EDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        71 ~~~~t~psGL~y~dlk~G~G~~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      .++.++++||+|+++++|+|..|+.||.|.|||+|++ ||++||+|+++.         +|++|.+
T Consensus        21 ~~~~~~~~gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~---------~p~~f~l   77 (133)
T 2y78_A           21 MTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRN---------DPFAFVL   77 (133)
T ss_dssp             TCCEECTTSCEEEEEECCSSCBCCTTSEEEEEEEEEETTSCEEEETTTTT---------CCEEEET
T ss_pred             CCcEECCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCEEeccCcCC---------CCEEEEe
Confidence            4578899999999999999999999999999999999 999999998764         6998874

>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A

Probab=99.29  E-value=6.4e-12  Score=100.43  Aligned_cols=57  Identities=25%  Similarity=0.251  Sum_probs=52.1

Q ss_pred             CCCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           70 LEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        70 ~~~~~t~psGL~y~dlk~G~G~~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      .+++.++++||+|+++++|+|..|+.||.|.|||+|++ ||++||||+++.         +|++|.+
T Consensus       113 ~~~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g---------~p~~f~l  170 (224)
T 1q6h_A          113 EKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRG---------EPLSFRL  170 (224)
T ss_dssp             STTEEECTTSCEEEEEECCSSCCCCTTCEEEEEEEEEETTSCEEEEGGGGT---------SCEEEEG
T ss_pred             CCCeEECCCceEEEEEecccCccccCCCEEEEEEEEEeCCCCEEeeccccC---------CCEEEEc
Confidence            36778899999999999999999999999999999999 999999999874         7999864

>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1

Probab=99.29  E-value=5.4e-12  Score=89.11  Aligned_cols=53  Identities=19%  Similarity=0.294  Sum_probs=48.1

Q ss_pred             eeCCCCcEEEEeecCCCCC-CCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           74 HTTSDGLKYYDIVEGKGPV-AQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        74 ~t~psGL~y~dlk~G~G~~-p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      .++++||+|+++++|+|.. ++.||.|.|||+|++ ||++||+|+++.         +|++|.+
T Consensus         2 ~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~---------~p~~f~l   56 (113)
T 1yat_A            2 EVIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRG---------SPFQCNI   56 (113)
T ss_dssp             EECGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTTTT---------CCEEEET
T ss_pred             CCCCCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCCCC---------CcEEEEe
Confidence            3578999999999999998 999999999999999 999999998863         6888874

>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}

Probab=99.27  E-value=4.7e-12  Score=92.58  Aligned_cols=60  Identities=23%  Similarity=0.261  Sum_probs=53.9

Q ss_pred             CCCCCCceeCCCCcEEE--EeecCCCCC-CCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           67 AIPLEDYHTTSDGLKYY--DIVEGKGPV-AQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        67 ~~p~~~~~t~psGL~y~--dlk~G~G~~-p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      .+.+..+.++++||+|+  ++++|+|.. |+.||.|.|||+|++ ||++||+|+++.         +|++|.+
T Consensus        11 ~~~~~~~~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~---------~p~~f~l   74 (130)
T 2lgo_A           11 TLEAQTQGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSRG---------KPFQFTL   74 (130)
T ss_dssp             CSCCSSCSSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTTTT---------CCEEEET
T ss_pred             ccccccceeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCcCC---------CCEEEEe
Confidence            45667788899999999  999999998 999999999999999 999999998863         6888875

>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0

Probab=99.23  E-value=1.2e-11  Score=98.89  Aligned_cols=55  Identities=16%  Similarity=0.212  Sum_probs=50.3

Q ss_pred             CCCCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           69 PLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        69 p~~~~~t~psGL~y~dlk~G~G~~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      ..++++++++||+|+++++|+|+.|+.||.|.|||+|++ ||++||||  .          +|++|.+
T Consensus       108 ~~~gv~~~~sGl~y~vl~~G~G~~p~~gd~V~V~Y~g~l~dG~vfDss--~----------~P~~f~l  163 (219)
T 3oe2_A          108 AKPGVKELADGILMTELTPGTGPKPDANGRVEVRYVGRLPDGKIFDQS--T----------QPQWFRL  163 (219)
T ss_dssp             TSTTCEECGGGCEEEEEECCCSCCCCTTSEEEEEEEEECTTSCEEEEC--S----------SCEEEEG
T ss_pred             cCCCcEECCCCeEEEEEecCCCccCCCCCEEEEEEEEEECCCCEeecc--C----------CcEEEEe
Confidence            456789999999999999999999999999999999999 99999999  2          6988864

>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*

Probab=99.22  E-value=2e-11  Score=86.74  Aligned_cols=58  Identities=12%  Similarity=0.074  Sum_probs=46.9

Q ss_pred             CCCCcEEEEeecCCCCC-CCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           76 TSDGLKYYDIVEGKGPV-AQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        76 ~psGL~y~dlk~G~G~~-p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      +|+||+|+++++|+|.. |+.||.|.|||+|++ ||++||+|++...  .++-..+|+.|.+
T Consensus         2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~--~~~~~~~p~~f~l   61 (119)
T 3kz7_A            2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSS--KKKKNAKPLSFKV   61 (119)
T ss_dssp             CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSS--STTTTCCCEEEET
T ss_pred             CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEecccccc--ccccCCCCEEEEE
Confidence            68999999999999964 999999999999999 9999999986410  0001126999875

>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}

Probab=99.21  E-value=2.2e-11  Score=93.80  Aligned_cols=56  Identities=14%  Similarity=0.088  Sum_probs=50.9

Q ss_pred             CCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEe--CCeEeeeccccccccCCccccccEEEEE
Q 032561           71 EDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF--RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        71 ~~~~t~psGL~y~dlk~G~G~~p~~Gd~V~VhY~G~l--dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      .++.++++||+|+++++|+|..|+.||.|.|||+|++  ||++||+|+++.         +||.|.+
T Consensus        42 ~~~~~~~~gl~~~vl~~G~G~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~---------~p~~f~l   99 (180)
T 2f4e_A           42 SEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQ---------QPIELVL   99 (180)
T ss_dssp             SCCEEEETTEEEEEEECCBSCCBCTTCEEEEEEEEEETTTCCEEEETTTTT---------CCEEEET
T ss_pred             CCcEECCCceEEEEEeCCCCCCCCCCCEEEEEEEEEECCCCcEEeccCccC---------CCEEEEe
Confidence            4678899999999999999999999999999999999  699999998764         6888874

>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*

Probab=99.20  E-value=4.2e-11  Score=94.22  Aligned_cols=56  Identities=34%  Similarity=0.506  Sum_probs=51.0

Q ss_pred             CCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           71 EDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        71 ~~~~t~psGL~y~dlk~G~G~~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      ..+.++++||+|+++++|+|..|+.||.|.|||+|++ ||++||+|+++.         +|++|.+
T Consensus        97 ~t~~~~~sGl~~~vl~~G~G~~~~~gd~V~v~Y~g~l~dG~~fdss~~~~---------~P~~f~l  153 (209)
T 3uf8_A           97 STVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRN---------DPFAFVL  153 (209)
T ss_dssp             CCCEECTTSCEEEEEECCCSCBCCTTCEEEEEEEEEETTSCEEEESGGGT---------CCEEEET
T ss_pred             ccccCCCCceEEEEEEcCCCCcCCCCCEEEEEEEEEECCCCEEEEccccC---------CCEEEEe
Confidence            3477899999999999999999999999999999999 999999999874         6998874

>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...

Probab=99.17  E-value=3.6e-11  Score=83.82  Aligned_cols=48  Identities=25%  Similarity=0.437  Sum_probs=44.0

Q ss_pred             CcEEEEeecCCCCC-CCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           79 GLKYYDIVEGKGPV-AQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        79 GL~y~dlk~G~G~~-p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      ||+|+++++|+|.. |+.||.|.|||+|++ ||++||+|+++.         +|++|.+
T Consensus         1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~---------~p~~f~l   50 (107)
T 2ppn_A            1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRN---------KPFKFML   50 (107)
T ss_dssp             CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHT---------SCEEEET
T ss_pred             CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCCCC---------CCEEEEe
Confidence            79999999999988 999999999999999 999999998763         6888864

>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A

Probab=99.16  E-value=5.2e-11  Score=88.23  Aligned_cols=51  Identities=22%  Similarity=0.249  Sum_probs=46.8

Q ss_pred             CCCCcEEEEeecCCCC-CCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           76 TSDGLKYYDIVEGKGP-VAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        76 ~psGL~y~dlk~G~G~-~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      .++||+|+++++|+|. .|+.||.|.|||+|++ ||++||+|+++.         +|++|.+
T Consensus        33 ~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~---------~p~~f~l   85 (144)
T 3o5e_A           33 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRN---------EPFVFSL   85 (144)
T ss_dssp             CSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGGGT---------SCEEEET
T ss_pred             CCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecccC---------CCeEEEe
Confidence            5789999999999998 6999999999999999 999999999874         7999875

>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A

Probab=99.16  E-value=4.3e-11  Score=86.72  Aligned_cols=52  Identities=21%  Similarity=0.245  Sum_probs=46.8

Q ss_pred             eCCCCcEEEEeecCCCC-CCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           75 TTSDGLKYYDIVEGKGP-VAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        75 t~psGL~y~dlk~G~G~-~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      ..++||+|+++++|+|. .|+.||.|.|||+|++ ||++||+|+++.         +|++|.+
T Consensus        16 ~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~---------~p~~f~l   69 (128)
T 3o5q_A           16 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRN---------EPFVFSL   69 (128)
T ss_dssp             SCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHT---------SCEEEET
T ss_pred             cCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCCCC---------CCEEEEE
Confidence            36789999999999997 5999999999999999 999999998864         6998875

>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1

Probab=99.15  E-value=4.4e-11  Score=87.63  Aligned_cols=51  Identities=25%  Similarity=0.318  Sum_probs=46.6

Q ss_pred             CCCCcEEEEeecCCCC-CCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           76 TSDGLKYYDIVEGKGP-VAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        76 ~psGL~y~dlk~G~G~-~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      .++||+|+++++|+|. .|+.||.|.|||+|++ ||++||+|+++.         +|++|.+
T Consensus        12 ~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~---------~p~~f~l   64 (135)
T 1r9h_A           12 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRG---------DQFSFNL   64 (135)
T ss_dssp             CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHT---------SCEEEET
T ss_pred             CCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCC---------CCEEEEe
Confidence            6899999999999997 5999999999999999 999999998763         6998875

>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}

Probab=99.11  E-value=3.7e-11  Score=87.93  Aligned_cols=54  Identities=19%  Similarity=0.082  Sum_probs=42.9

Q ss_pred             ceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEe--CCeEeeeccccccccCCccccccEEEEE
Q 032561           73 YHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF--RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        73 ~~t~psGL~y~dlk~G~G~~p~~Gd~V~VhY~G~l--dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      -.+.++||+|+++++|+|..++.||.|.|||+|++  ||++||+|+++.         +|++|.+
T Consensus        21 ~v~~~~gl~~~vl~~G~g~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~---------~p~~f~l   76 (134)
T 3b7x_A           21 DISGDRGVLKDVIREGAGDLVAPDASVLVKYSGYLEHMDRPFDSNYFRK---------TPRLMKL   76 (134)
T ss_dssp             ESSSSSSEEEEEEECCEEEECCTTCEEEEEEEEECTTCSSCSEEC----------------CEEC
T ss_pred             eeeCCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCeEEEecCCCC---------CCEEEEc
Confidence            34578999999999999999999999999999998  599999998764         6888875

>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}

Probab=99.08  E-value=1.8e-10  Score=82.65  Aligned_cols=58  Identities=12%  Similarity=0.071  Sum_probs=49.1

Q ss_pred             CCceeCCCCcEEEEeecCC--CCCCCCCCEEEEEEEEEe--CCeEeeeccccccccCCccccccEEEEE
Q 032561           71 EDYHTTSDGLKYYDIVEGK--GPVAQKGSTVQVHFDCIF--RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        71 ~~~~t~psGL~y~dlk~G~--G~~p~~Gd~V~VhY~G~l--dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      .+..++++||+|+++++|+  |..++.||.|.|||+|++  ||++||+|+++.  .+     +|+.|.+
T Consensus         5 ~~~~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~--~~-----~p~~f~l   66 (125)
T 4dip_A            5 MGALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHN--NG-----QPIWFTL   66 (125)
T ss_dssp             CGGGCCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHT--TT-----CCEEEET
T ss_pred             CceEECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcccCC--CC-----cCEEEEe
Confidence            3456789999999999998  889999999999999998  899999998641  11     6888874

>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A

Probab=99.06  E-value=2.5e-10  Score=82.48  Aligned_cols=56  Identities=23%  Similarity=0.243  Sum_probs=47.3

Q ss_pred             CCceeCCCCcEEE-EeecC---CCCCCCCCCEEEEEEEEEe--CCeEeeeccccccccCCccccccEEEEE
Q 032561           71 EDYHTTSDGLKYY-DIVEG---KGPVAQKGSTVQVHFDCIF--RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        71 ~~~~t~psGL~y~-dlk~G---~G~~p~~Gd~V~VhY~G~l--dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      .++.++++|+.|+ ++++|   +|..|+.||.|.|||+|++  ||++||+|+++.         +|++|.+
T Consensus         8 ~~~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~---------~p~~f~l   69 (129)
T 2vn1_A            8 EKVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRN---------VPFKFHL   69 (129)
T ss_dssp             EEEECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGTT---------CCEEEET
T ss_pred             CCcEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCCC---------ccEEEEe
Confidence            4567788888874 78855   5788999999999999998  999999999864         6998875

>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}

Probab=99.06  E-value=1.3e-10  Score=93.83  Aligned_cols=56  Identities=14%  Similarity=0.088  Sum_probs=50.3

Q ss_pred             CCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEe--CCeEeeeccccccccCCccccccEEEEE
Q 032561           71 EDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF--RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        71 ~~~~t~psGL~y~dlk~G~G~~p~~Gd~V~VhY~G~l--dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      .++.++++||+|.++++|+|..|+.||.|.|||+|++  ||++||+|+.+.         +|++|.+
T Consensus        42 ~~~~~~~~~~~~~~~~~g~g~~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~---------~~~~~~l   99 (338)
T 2if4_A           42 SEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQ---------QPIELVL   99 (338)
T ss_dssp             SCCEEEETTEEEEEEECCBSCCCCTTCEEEEEEEEEETTTCCCCEEHHHHT---------CCEEEET
T ss_pred             cCceeCCCCeEEEEEeCCCCCCCCCCCEEEEEEEEEEcCCCcEeecccCCC---------CCeEEEc
Confidence            4567789999999999999999999999999999999  599999998764         6988874

>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}

Probab=99.04  E-value=3.3e-10  Score=85.95  Aligned_cols=46  Identities=24%  Similarity=0.303  Sum_probs=40.8

Q ss_pred             CCCceeCCCCc-EEEEeecCCCC--CCCCCCEEEEEEEEEe-CCeEeeec
Q 032561           70 LEDYHTTSDGL-KYYDIVEGKGP--VAQKGSTVQVHFDCIF-RGITAVSS  115 (138)
Q Consensus        70 ~~~~~t~psGL-~y~dlk~G~G~--~p~~Gd~V~VhY~G~l-dG~~FDSS  115 (138)
                      ++...++++|+ +|+++++|+|.  .|+.||.|.|||+|++ ||++|||+
T Consensus        34 ~~~~~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds~   83 (157)
T 2jwx_A           34 EEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE   83 (157)
T ss_dssp             CSCEESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEEE
T ss_pred             cccceECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeecC
Confidence            34455889998 89999999998  8999999999999999 99999983

>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A

Probab=99.02  E-value=4.7e-10  Score=79.91  Aligned_cols=46  Identities=24%  Similarity=0.303  Sum_probs=40.7

Q ss_pred             CCCceeCCCC-cEEEEeecCCCC--CCCCCCEEEEEEEEEe-CCeEeeec
Q 032561           70 LEDYHTTSDG-LKYYDIVEGKGP--VAQKGSTVQVHFDCIF-RGITAVSS  115 (138)
Q Consensus        70 ~~~~~t~psG-L~y~dlk~G~G~--~p~~Gd~V~VhY~G~l-dG~~FDSS  115 (138)
                      ++....+++| |+|+++++|+|.  .|+.||.|.|||+|++ ||++||++
T Consensus         4 ~~~~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~   53 (118)
T 2awg_A            4 EEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE   53 (118)
T ss_dssp             TCEEESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEE
T ss_pred             ccceEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECC
Confidence            4445667888 999999999997  7999999999999999 99999973

>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1.1e-09  Score=80.15  Aligned_cols=46  Identities=24%  Similarity=0.290  Sum_probs=41.2

Q ss_pred             CCCCceeCCCC-cEEEEeecCCCC--CCCCCCEEEEEEEEEe-CCeEeee
Q 032561           69 PLEDYHTTSDG-LKYYDIVEGKGP--VAQKGSTVQVHFDCIF-RGITAVS  114 (138)
Q Consensus        69 p~~~~~t~psG-L~y~dlk~G~G~--~p~~Gd~V~VhY~G~l-dG~~FDS  114 (138)
                      .++....+++| |+|+++++|+|.  .|+.||.|.|||+|++ ||++||+
T Consensus         7 ~~~~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds   56 (135)
T 2d9f_A            7 GEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQE   56 (135)
T ss_dssp             CSSCEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEE
T ss_pred             cccCcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEec
Confidence            34556677888 999999999998  7999999999999999 9999997

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A

Probab=98.98  E-value=7.8e-10  Score=90.14  Aligned_cols=51  Identities=24%  Similarity=0.235  Sum_probs=47.0

Q ss_pred             CCCCcEEEEeecCCCCC-CCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           76 TSDGLKYYDIVEGKGPV-AQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        76 ~psGL~y~dlk~G~G~~-p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      .++||+|+++++|+|.. |+.||.|.|||+|++ ||++||+|+++.         +|++|.+
T Consensus        49 ~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~---------~p~~f~l  101 (280)
T 1q1c_A           49 QDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRK---------DKFSFDL  101 (280)
T ss_dssp             CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSS---------SCEEEET
T ss_pred             CCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCC---------CCEEEEE
Confidence            57899999999999998 999999999999999 999999999764         6998875

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A

Probab=98.93  E-value=3.3e-10  Score=95.12  Aligned_cols=52  Identities=21%  Similarity=0.233  Sum_probs=27.7

Q ss_pred             eCCCCcEEEEeecCCCCC-CCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           75 TTSDGLKYYDIVEGKGPV-AQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        75 t~psGL~y~dlk~G~G~~-p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      +.++||+|+++++|+|.. |+.||.|.|||+|++ ||++||||+++.         +|++|.+
T Consensus        28 ~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~---------~p~~~~~   81 (457)
T 1kt0_A           28 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRN---------EPFVFSL   81 (457)
T ss_dssp             -----CEEEC--------CCCBTCEEEEEEEEEC-----CBC---------------CEEEET
T ss_pred             CCCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCC---------CCeEEEe
Confidence            368899999999999998 999999999999999 999999999874         7998875

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A

Probab=98.87  E-value=2.2e-10  Score=95.32  Aligned_cols=55  Identities=25%  Similarity=0.374  Sum_probs=0.0

Q ss_pred             CceeCCCCcEEEEeecCCC-CCCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           72 DYHTTSDGLKYYDIVEGKG-PVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        72 ~~~t~psGL~y~dlk~G~G-~~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      +...+++||+|+++++|+| ..|+.||.|.|||+|++ ||++||||+++.         +|+.|.+
T Consensus         5 ~~~~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~---------~p~~~~l   61 (356)
T 3jxv_A            5 ENEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRDRD---------DTFKFKL   61 (356)
T ss_dssp             ------------------------------------------------------------------
T ss_pred             cceECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECCCCEEEEcccCC---------CcEEEEe
Confidence            3456799999999999999 56999999999999999 999999999874         6888876

>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A

Probab=98.63  E-value=5.5e-08  Score=78.16  Aligned_cols=43  Identities=14%  Similarity=0.182  Sum_probs=38.6

Q ss_pred             ceeCCCCcEEEEeecCCCC-CCCCCCEEEEEEEEEeCCeEeeec
Q 032561           73 YHTTSDGLKYYDIVEGKGP-VAQKGSTVQVHFDCIFRGITAVSS  115 (138)
Q Consensus        73 ~~t~psGL~y~dlk~G~G~-~p~~Gd~V~VhY~G~ldG~~FDSS  115 (138)
                      ..+.++||+++++++|+|. .|+.|++|.|||+|+++|++||+|
T Consensus        20 ~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~~g~~fd~~   63 (336)
T 1p5q_A           20 HMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQR   63 (336)
T ss_dssp             --CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEETTEEEEEE
T ss_pred             eecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEECCEEEecC
Confidence            3456889999999999998 599999999999999999999987

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A

Probab=98.58  E-value=7.6e-08  Score=80.00  Aligned_cols=50  Identities=14%  Similarity=0.157  Sum_probs=44.1

Q ss_pred             CCCcEEEEeecCCC-CCCCCCCEEEEEEEEEe-CCeEeeecc-ccccccCCccccccEEEEE
Q 032561           77 SDGLKYYDIVEGKG-PVAQKGSTVQVHFDCIF-RGITAVSSR-ESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        77 psGL~y~dlk~G~G-~~p~~Gd~V~VhY~G~l-dG~~FDSS~-~r~~~~G~r~i~eP~~F~v  135 (138)
                      ++|++|.++++|+| ..|+.||.|.|||+|++ ||++||+|. .+.         +||+|.+
T Consensus       243 d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~fd~~~~~~~---------~p~~f~~  295 (356)
T 3jxv_A          243 DKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGHDEQ---------EPFEFKT  295 (356)
T ss_dssp             TCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEEEEESCTTS---------CCCEEET
T ss_pred             ccceeEEeeecccccCCCCCCCEEEEEEEEEECCCCEEeeccccCC---------cCEEEEE
Confidence            57999999999999 67999999999999999 999999984 332         6988874

>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}

Probab=98.49  E-value=1.3e-07  Score=65.09  Aligned_cols=38  Identities=16%  Similarity=0.216  Sum_probs=33.8

Q ss_pred             CCCCCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           89 KGPVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        89 ~G~~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      +|..++.||.|.|||+|++ ||++||+|+++.         +|++|.+
T Consensus         2 ~g~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~---------~p~~f~l   40 (102)
T 2pbc_A            2 SPIKSRKGDVLHMHYTGKLEDGTEFDSSLPQN---------QPFVFSL   40 (102)
T ss_dssp             CCCCCCTTCEEEEEEEEECTTSCEEEESTTTT---------CCEEEET
T ss_pred             CCCcCCCCCEEEEEEEEEECCCCEEEeCCCCC---------CCEEEEe
Confidence            5778999999999999999 999999998764         6888874

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A

Probab=98.22  E-value=2.2e-06  Score=69.68  Aligned_cols=40  Identities=15%  Similarity=0.225  Sum_probs=36.7

Q ss_pred             CCCCcEEEEeecCCCC-CCCCCCEEEEEEEEEeCCeEeeec
Q 032561           76 TSDGLKYYDIVEGKGP-VAQKGSTVQVHFDCIFRGITAVSS  115 (138)
Q Consensus        76 ~psGL~y~dlk~G~G~-~p~~Gd~V~VhY~G~ldG~~FDSS  115 (138)
                      .+.||.|+++++|+|. .|+.||.|.|||+|++||++||++
T Consensus       166 ~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~dG~~fd~~  206 (280)
T 1q1c_A          166 EDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQR  206 (280)
T ss_dssp             CSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEETTEEEEEE
T ss_pred             cccceeEEeeecccccccccCCceEEEEEEEEeCCEEEecC
Confidence            4579999999999998 499999999999999999999973

>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}

Probab=97.97  E-value=4.5e-06  Score=64.07  Aligned_cols=35  Identities=34%  Similarity=0.326  Sum_probs=31.4

Q ss_pred             CCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           92 VAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        92 ~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      .+++||.|.+||+|++ ||++||||+++.         +|++|.+
T Consensus        24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~~---------~P~~f~l   59 (169)
T 4dt4_A           24 SVQSNSAVLVHFTLKLDDGTTAESTRNNG---------KPALFRL   59 (169)
T ss_dssp             SCCTTCEEEEEEEEEETTSCEEEEHHHHT---------SCEEEET
T ss_pred             cCCCCCEEEEEEEEEECCCCEEEecCCCC---------CCEEEEE
Confidence            5899999999999999 999999999874         6998874

>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1

Probab=97.91  E-value=1e-05  Score=57.77  Aligned_cols=35  Identities=14%  Similarity=0.151  Sum_probs=29.4

Q ss_pred             CCCCCCCCEEEEEEEEEeCCeEeeeccccccccCCccccccEEEEE
Q 032561           90 GPVAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        90 G~~p~~Gd~V~VhY~G~ldG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      +..+++||.|.|||+|++||++||+|+.           +|+.|.+
T Consensus        27 ~~~~~~gD~V~v~Y~g~~dG~~fdss~~-----------~p~~f~l   61 (113)
T 1hxv_A           27 DKKLANGDIAIIDFTGIVDNKKLASASA-----------QNYELTI   61 (113)
T ss_dssp             --CCCSSEEEEEEEEEEETTEECSTTCC-----------SEEEEEE
T ss_pred             CCCCCCCCEEEEEEEEEECCEEcccCCc-----------cCEEEEE
Confidence            4569999999999999999999999952           6888875

>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A

Probab=97.89  E-value=1.1e-05  Score=61.15  Aligned_cols=26  Identities=23%  Similarity=0.397  Sum_probs=24.2

Q ss_pred             CCCCCEEEEEEEEEeCCeEeeecccc
Q 032561           93 AQKGSTVQVHFDCIFRGITAVSSRES  118 (138)
Q Consensus        93 p~~Gd~V~VhY~G~ldG~~FDSS~~r  118 (138)
                      +++||.|.|||+|++||++||||+++
T Consensus         2 i~~Gd~V~v~Y~g~ldG~vfDss~~~   27 (157)
T 3pr9_A            2 VEKGKMVKISYDGYVDGKLFDTTNEE   27 (157)
T ss_dssp             CCTTCEEEEEEEEEETTEEEEESCHH
T ss_pred             CCCCCEEEEEEEEEECCEEEEecccc
Confidence            67999999999999999999999874

>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1

Probab=97.69  E-value=1.4e-05  Score=59.72  Aligned_cols=25  Identities=24%  Similarity=0.266  Sum_probs=23.5

Q ss_pred             CCCCCEEEEEEEEEe-CCeEeeeccc
Q 032561           93 AQKGSTVQVHFDCIF-RGITAVSSRE  117 (138)
Q Consensus        93 p~~Gd~V~VhY~G~l-dG~~FDSS~~  117 (138)
                      +++||.|.+||+|++ ||++||||++
T Consensus         2 i~~gd~V~v~Y~g~~~dG~~fdss~~   27 (151)
T 1ix5_A            2 VDKGVKIKVDYIGKLESGDVFDTSIE   27 (151)
T ss_dssp             CCTTCEEEECCEECCTTSCCCEESCH
T ss_pred             CCCCCEEEEEEEEEECCCCEEEecch
Confidence            689999999999999 9999999975

>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A

Probab=97.69  E-value=3.3e-05  Score=62.02  Aligned_cols=26  Identities=23%  Similarity=0.397  Sum_probs=24.1

Q ss_pred             CCCCCEEEEEEEEEeCCeEeeecccc
Q 032561           93 AQKGSTVQVHFDCIFRGITAVSSRES  118 (138)
Q Consensus        93 p~~Gd~V~VhY~G~ldG~~FDSS~~r  118 (138)
                      +++||.|.|||+|++||++||||+++
T Consensus         2 i~~Gd~V~v~Y~g~ldG~vfDss~~~   27 (231)
T 3prb_A            2 VEKGKMVKISYDGYVDGKLFDTTNEE   27 (231)
T ss_dssp             CCTTCEEEEEEEEEETTEEEEESCHH
T ss_pred             CCCCCEEEEEEEEEECCEEEEeccch
Confidence            67899999999999999999999874

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A

Probab=97.66  E-value=7.7e-05  Score=62.36  Aligned_cols=40  Identities=20%  Similarity=0.283  Sum_probs=35.3

Q ss_pred             CCCCcEEEEeecCCCC-CCCCCCEEEEEEEEEeCCeEeeec
Q 032561           76 TSDGLKYYDIVEGKGP-VAQKGSTVQVHFDCIFRGITAVSS  115 (138)
Q Consensus        76 ~psGL~y~dlk~G~G~-~p~~Gd~V~VhY~G~ldG~~FDSS  115 (138)
                      .+.++.+.++++|.|. .|+.|++|.|||+|++||++||++
T Consensus       144 ~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~~g~~f~~~  184 (457)
T 1kt0_A          144 EDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRMFDCR  184 (457)
T ss_dssp             SSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEETTEEEEEE
T ss_pred             CCcceEEEEEecCCCCCCCCCCCEEEEEEEEEeCCeEEecC
Confidence            3458889999999885 599999999999999999999974

>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}

Probab=96.78  E-value=0.0014  Score=48.73  Aligned_cols=28  Identities=7%  Similarity=0.044  Sum_probs=25.1

Q ss_pred             CCCCCCCEEEEEEEEEe--CCeEeeecccc
Q 032561           91 PVAQKGSTVQVHFDCIF--RGITAVSSRES  118 (138)
Q Consensus        91 ~~p~~Gd~V~VhY~G~l--dG~~FDSS~~r  118 (138)
                      ..+++||.|.+||+|++  ||++||||+++
T Consensus         5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~~   34 (151)
T 2kr7_A            5 DLESIKQAALIEYEVREQGSSIVLDSNISK   34 (151)
T ss_dssp             CCTTSCCEEEEEEEEEESSCSCEEEESTTT
T ss_pred             cCCCCCCEEEEEEEEEECCCCCEEEeCCCC
Confidence            45889999999999999  99999999853

>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}

Probab=96.68  E-value=0.0017  Score=50.63  Aligned_cols=26  Identities=19%  Similarity=0.184  Sum_probs=24.1

Q ss_pred             CCCCCEEEEEEEEEe-CCeEeeecccc
Q 032561           93 AQKGSTVQVHFDCIF-RGITAVSSRES  118 (138)
Q Consensus        93 p~~Gd~V~VhY~G~l-dG~~FDSS~~r  118 (138)
                      +++||.|+|||++++ ||++||||+++
T Consensus         3 i~~gd~V~v~Y~g~~~dG~~fdss~~~   29 (196)
T 2kfw_A            3 VAKDLVVSLAYQVRTEDGVLVDESPVS   29 (196)
T ss_dssp             CCSSCEEEEEEEEEETTTEEEEECCTT
T ss_pred             CCCCCEEEEEEEEEECCCCEEEecCCC
Confidence            789999999999999 99999999863

>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}

Probab=96.59  E-value=0.0017  Score=49.48  Aligned_cols=26  Identities=19%  Similarity=0.184  Sum_probs=24.1

Q ss_pred             CCCCCEEEEEEEEEe-CCeEeeecccc
Q 032561           93 AQKGSTVQVHFDCIF-RGITAVSSRES  118 (138)
Q Consensus        93 p~~Gd~V~VhY~G~l-dG~~FDSS~~r  118 (138)
                      +++||.|.+||+|++ ||++||||+++
T Consensus         3 i~~gd~V~v~Y~g~~~dG~~fdss~~~   29 (171)
T 2k8i_A            3 VAKDLVVSLAYQVRTEDGVLVDESPVS   29 (171)
T ss_dssp             CCTTEEEEEEEEEEETTSCEEEECCSS
T ss_pred             CCCCCEEEEEEEEEECCCCEEeeccCC
Confidence            689999999999999 99999999863

>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*

Probab=95.97  E-value=0.0063  Score=45.68  Aligned_cols=24  Identities=8%  Similarity=0.153  Sum_probs=22.5

Q ss_pred             CCCCCEEEEEEEEEeCCeEeeecc
Q 032561           93 AQKGSTVQVHFDCIFRGITAVSSR  116 (138)
Q Consensus        93 p~~Gd~V~VhY~G~ldG~~FDSS~  116 (138)
                      +++||.|.+||+|+.||++||||+
T Consensus         3 i~~gd~V~v~Y~g~~dG~~fdss~   26 (158)
T 3cgm_A            3 VGQDKVVTIRYTLQVEGEVLDQGE   26 (158)
T ss_dssp             CCTTEEEEEEEEEEETTEEEEEEE
T ss_pred             CCCCCEEEEEEEEEECCEEEEeeE
Confidence            679999999999999999999996

>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5

Probab=95.91  E-value=0.0038  Score=53.35  Aligned_cols=27  Identities=11%  Similarity=0.156  Sum_probs=24.7

Q ss_pred             CCCCCCCCEEEEEEEEEeCCeEeeecc
Q 032561           90 GPVAQKGSTVQVHFDCIFRGITAVSSR  116 (138)
Q Consensus        90 G~~p~~Gd~V~VhY~G~ldG~~FDSS~  116 (138)
                      +..++.||.|.+||+|+.||..||+++
T Consensus       155 ~~~~~~gD~V~i~y~g~~dG~~fd~~~  181 (432)
T 1w26_A          155 DGAVEAEDRVTIDFTGSVDGEEFEGGK  181 (432)
T ss_dssp             SSCCCTTCEEEECEEEESSSCBCSSCC
T ss_pred             CCCCCCCCEEEEEEEEeeCCeEccCCC
Confidence            456899999999999999999999986

>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A

Probab=95.65  E-value=0.0051  Score=52.00  Aligned_cols=26  Identities=19%  Similarity=0.360  Sum_probs=23.6

Q ss_pred             CCCCCCCEEEEEEEEEeCCeEeeecc
Q 032561           91 PVAQKGSTVQVHFDCIFRGITAVSSR  116 (138)
Q Consensus        91 ~~p~~Gd~V~VhY~G~ldG~~FDSS~  116 (138)
                      ..++.||.|.+||+|+.||..||++.
T Consensus       159 ~~~~~gD~V~i~y~g~~dG~~fd~~~  184 (392)
T 1t11_A          159 EAAENGKRVSIDFVGSIDGVEFEGGK  184 (392)
T ss_dssp             CCCCTTCEEEEEEEEESSSSCCTTCE
T ss_pred             CCCCCCCEEEEEEEEEECCEEccCCC
Confidence            45899999999999999999999884

>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A

Probab=83.87  E-value=0.72  Score=39.27  Aligned_cols=26  Identities=27%  Similarity=0.339  Sum_probs=22.7

Q ss_pred             CCCCCCEEEEEEEEEeCCeEeeeccc
Q 032561           92 VAQKGSTVQVHFDCIFRGITAVSSRE  117 (138)
Q Consensus        92 ~p~~Gd~V~VhY~G~ldG~~FDSS~~  117 (138)
                      .++.||.|.++|+|+.||..|+++..
T Consensus       154 ~a~~gD~V~id~~~~~dG~~~~~~~~  179 (433)
T 3gty_X          154 PAEAGDLVRVNMEVYNEEGKKLTSRE  179 (433)
T ss_dssp             CCCTTSEEEEEEEEECTTSCEEEEEE
T ss_pred             ccCCCCEEEEEEEEEECCEECcCCCC
Confidence            47899999999999889999997653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	138
d1u79a_	125	d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis tha	7e-07
d1yata_	113	d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeas	2e-04
d1r9ha_	118	d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabd	8e-04
d1q1ca1	120	d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Hu	0.001
d1q1ca2	117	d.26.1.1 (A:141-257) FKBP52, N-terminal domains {H	0.004
d2ppna1	107	d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12)	0.004
d1kt1a3	115	d.26.1.1 (A:139-253) FKBP51, N-terminal domains {M	0.004

>d1u79a_ d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 125

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP13
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 43.3 bits (101), Expect = 7e-07
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 72  DYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF 107
           ++  +  GL + D V G GP A KG  ++ H+    
Sbjct: 2   EFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKL 37

>d1yata_ d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 113

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Calcineurin (FKBP12.6)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.3 bits (83), Expect = 2e-04
 Identities = 7/32 (21%), Positives = 11/32 (34%), Gaps = 1/32 (3%)

Query: 75  TTSDGLKYYDIVEGKGP-VAQKGSTVQVHFDC 105
                +K   I  G G    + G  V +H+  
Sbjct: 3   VIEGNVKIDRISPGDGATFPKTGDLVTIHYTG 34

>d1r9ha_ d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabditis elegans [TaxId: 6239]} Length = 118

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKB-6, N-terminal domain
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 34.7 bits (79), Expect = 8e-04
 Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)

Query: 76  TSDGLKYYDIVEGKG-PVAQKGSTVQVHFDC 105
              G+      EG+G      G+TV+VH+  
Sbjct: 8   KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVG 38

>d1q1ca1 d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 120

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 0.001
 Identities = 8/31 (25%), Positives = 12/31 (38%), Gaps = 1/31 (3%)

Query: 76  TSDGLKYYDIVEGKGP-VAQKGSTVQVHFDC 105
             +G+      EG G  +   G  V VH+  
Sbjct: 9   QDEGVLKVIKREGTGTEMPMIGDRVFVHYTG 39

>d1q1ca2 d.26.1.1 (A:141-257) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.8 bits (74), Expect = 0.004
 Identities = 6/34 (17%), Positives = 14/34 (41%), Gaps = 1/34 (2%)

Query: 79  GLKYYDIVEGKGP-VAQKGSTVQVHFDCIFRGIT 111
           G+       G+G     +G+ V+V  +  ++   
Sbjct: 9   GIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKL 42

>d2ppna1 d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12), an immunophilin {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FK-506 binding protein (FKBP12), an immunophilin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.9 bits (74), Expect = 0.004
 Identities = 8/30 (26%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 79  GLKYYDIVEGKGP-VAQKGSTVQVHFDCIF 107
           G++   I  G G    ++G T  VH+  + 
Sbjct: 1   GVQVETISPGDGRTFPKRGQTCVVHYTGML 30

>d1kt1a3 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]} Length = 115

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

 Score = 32.7 bits (74), Expect = 0.004
 Identities = 7/32 (21%), Positives = 13/32 (40%), Gaps = 1/32 (3%)

Query: 75  TTSDGLKYYDIVEGKGP-VAQKGSTVQVHFDC 105
               G+       G+G     +G+ VQ+H + 
Sbjct: 5   LEDGGIIRRTKRRGEGYSNPNEGARVQIHLEG 36

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	138
d1u79a_	125	FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId:	99.55
d1q6ha_	210	Peptidyl-prolyl cis-trans isomerase FkpA {Escheric	99.48
d1fd9a_	204	Macrophage infectivity potentiator protein (MIP) {	99.43
d1q1ca1	120	FKBP52, N-terminal domains {Human (Homo sapiens) [	99.29
d1yata_	113	Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyc	99.28
d2ppna1	107	FK-506 binding protein (FKBP12), an immunophilin {	99.27
d1jvwa_	160	Macrophage infectivity potentiator protein (MIP) {	99.25
d1r9ha_	118	FKB-6, N-terminal domain {Caenorhabditis elegans [	99.25
d1kt1a2	111	FKBP51, N-terminal domains {Monkey (Saimiri bolivi	99.21
d1pbka_	116	FKBP25 {Human (Homo sapiens) [TaxId: 9606]}	99.09
d1kt1a3	115	FKBP51, N-terminal domains {Monkey (Saimiri bolivi	98.67
d1q1ca2	117	FKBP52, N-terminal domains {Human (Homo sapiens) [	98.42
d1ix5a_	151	Archaeal FKBP {Archaeon Methanococcus thermolithot	97.89
d1hxva_	85	Trigger factor PPIase domain {Mycoplasma genitaliu	96.92
d1t11a3	113	Trigger factor PPIase domain {Vibrio cholerae [Tax	88.47
d1l1pa_	106	Trigger factor PPIase domain {Escherichia coli [Ta	88.19

>d1u79a_ d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP13
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.55  E-value=2.9e-15  Score=106.71  Aligned_cols=55  Identities=25%  Similarity=0.369  Sum_probs=51.3

Q ss_pred             CceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           72 DYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        72 ~~~t~psGL~y~dlk~G~G~~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      |++++|+||+|.++++|+|+.|+.||+|.|||+|++ ||++||||+++.         +|++|++
T Consensus         2 ~~~~~psGl~y~~~~~G~G~~p~~gd~V~v~y~g~l~~G~~fdss~~~~---------~p~~~~~   57 (125)
T d1u79a_           2 EFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRG---------KPLTFRI   57 (125)
T ss_dssp             CCEECTTSCEEEEEECCSSCBCCTTCEEEEEEEEECTTSCEEEEHHHHT---------SCEEEET
T ss_pred             CcEECCCCCEEEEEEeccCCCCCCCCEEEEEEEeeecCCcEEecccccC---------cceeEec
Confidence            789999999999999999999999999999999999 999999998874         6888875

>d1q6ha_ d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase FkpA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Peptidyl-prolyl cis-trans isomerase FkpA
species: Escherichia coli [TaxId: 562]

Probab=99.48  E-value=3.5e-14  Score=109.69  Aligned_cols=58  Identities=24%  Similarity=0.243  Sum_probs=53.6

Q ss_pred             CCCCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           69 PLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        69 p~~~~~t~psGL~y~dlk~G~G~~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      ...+++++++||+|+++++|+|+.|+.||+|.|||+|+| ||++||+|+++.         +|++|.+
T Consensus        98 ~~~~v~~~~sGl~y~v~~~G~G~~p~~gd~v~v~y~g~l~dG~~fd~s~~~~---------~p~~~~~  156 (210)
T d1q6ha_          98 KEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRG---------EPLSFRL  156 (210)
T ss_dssp             HSTTEEECTTSCEEEEEECCSSCCCCTTCEEEEEEEEEETTSCEEEEGGGGT---------SCEEEEG
T ss_pred             ccCceEEccCceEEEEeeCCCCCCCCCCceEEEEEEEEEcCCCEEeecccCC---------Ccceecc
Confidence            346789999999999999999999999999999999999 999999999885         7999874

>d1fd9a_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Legionella pneumophila [TaxId: 446]

Probab=99.43  E-value=8.8e-14  Score=106.81  Aligned_cols=56  Identities=21%  Similarity=0.189  Sum_probs=52.2

Q ss_pred             CCCceeCCCCcEEEEeecCCCCCCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEE
Q 032561           70 LEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGF  134 (138)
Q Consensus        70 ~~~~~t~psGL~y~dlk~G~G~~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~  134 (138)
                      .++++++++||+|.++++|+|..|+.||+|.|||+|+| ||++||+|+.+.         +|++|.
T Consensus        90 ~~~v~~~~sGl~y~v~~~G~G~~p~~~d~v~v~y~g~l~dg~~f~~s~~~~---------~p~~~~  146 (204)
T d1fd9a_          90 KPGVVVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLIDGTVFDSTEKTG---------KPATFQ  146 (204)
T ss_dssp             STTEEECTTSCEEEEEECCCSCCCCTTCEEEEEEEEEETTSCEEEEHHHHC---------SCEEEE
T ss_pred             CCceEEecCccEEEEeecCCCcccCCCCEEEEEEEEEECCCCEecccccCC---------CCceec
Confidence            45788999999999999999999999999999999999 999999999885         799885

>d1q1ca1 d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=3.4e-12  Score=90.87  Aligned_cols=51  Identities=24%  Similarity=0.235  Sum_probs=46.5

Q ss_pred             CCCCcEEEEeecCCCCC-CCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           76 TSDGLKYYDIVEGKGPV-AQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        76 ~psGL~y~dlk~G~G~~-p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      .++||+|+++++|+|.. |..||+|.|||+|++ ||++||||+++.         +|++|.+
T Consensus         9 ~d~gv~~~i~~~G~G~~~P~~gd~V~v~y~~~l~dG~~fdss~~~~---------~p~~f~~   61 (120)
T d1q1ca1           9 QDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRK---------DKFSFDL   61 (120)
T ss_dssp             CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSS---------SCEEEET
T ss_pred             CCCCEEEEEEEcccCCcCCCCCCEEEEEEEEEEcCCCEEEeccccc---------cceeeec
Confidence            35899999999999965 899999999999999 999999999975         7999975

>d1yata_ d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Calcineurin (FKBP12.6)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.28  E-value=2.7e-12  Score=89.89  Aligned_cols=53  Identities=19%  Similarity=0.294  Sum_probs=47.6

Q ss_pred             eeCCCCcEEEEeecCCCCC-CCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           74 HTTSDGLKYYDIVEGKGPV-AQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        74 ~t~psGL~y~dlk~G~G~~-p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      ..+++||+|.++++|+|.+ |+.||+|.+||+|++ ||++||+++++.         +|+.|.+
T Consensus         2 ~~~d~gl~~~~l~~G~G~~~P~~gd~V~v~y~~~~~dG~~~ds~~~~~---------~~~~~~~   56 (113)
T d1yata_           2 EVIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRG---------SPFQCNI   56 (113)
T ss_dssp             EECGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTTTT---------CCEEEET
T ss_pred             cCccCCcEEEEEECccCCcCCCCCCEEEEEEEEEEecCcEEeccccCC---------ceEeeee
Confidence            3578999999999999986 899999999999999 999999999875         6888764

>d2ppna1 d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12), an immunophilin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FK-506 binding protein (FKBP12), an immunophilin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=2.6e-12  Score=89.29  Aligned_cols=48  Identities=25%  Similarity=0.437  Sum_probs=44.4

Q ss_pred             CcEEEEeecCCCCC-CCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           79 GLKYYDIVEGKGPV-AQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        79 GL~y~dlk~G~G~~-p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      ||+|+++++|+|.+ |+.||+|.+||+|++ ||++||+|+++.         +|+.|.+
T Consensus         1 Gv~~~~l~~G~G~~~p~~gd~V~v~y~g~l~dG~~~d~s~~~~---------~p~~~~~   50 (107)
T d2ppna1           1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRN---------KPFKFML   50 (107)
T ss_dssp             CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHT---------SCEEEET
T ss_pred             CcEEEEEECcCCccCCCCCCEEEEEEEEEecCCeEEEeeeccc---------eeeeEee
Confidence            89999999999986 899999999999999 999999999875         7999874

>d1jvwa_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.25  E-value=3.7e-12  Score=94.78  Aligned_cols=50  Identities=26%  Similarity=0.333  Sum_probs=46.0

Q ss_pred             CCCceeCCCCcEEEEeecCCCCC-CCCCCEEEEEEEEEe-CCeEeeeccccc
Q 032561           70 LEDYHTTSDGLKYYDIVEGKGPV-AQKGSTVQVHFDCIF-RGITAVSSRESK  119 (138)
Q Consensus        70 ~~~~~t~psGL~y~dlk~G~G~~-p~~Gd~V~VhY~G~l-dG~~FDSS~~r~  119 (138)
                      ..++.++|+||+|.++++|+|.. |+.||+|.|||+|++ ||++||+++++.
T Consensus        26 ~~~~~~~~sGl~y~il~~G~G~~~P~~gd~V~v~Y~g~l~dG~~fds~~~~~   77 (160)
T d1jvwa_          26 QPDAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSSRERG   77 (160)
T ss_dssp             STTEEECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTSCEEEEHHHHT
T ss_pred             CCCCEECCCCCEEEEEECcccccCCCCCcceEEEEEEEEccCCeeeeecccc
Confidence            46788999999999999999975 899999999999999 999999998764

>d1r9ha_ d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKB-6, N-terminal domain
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.25  E-value=3.3e-12  Score=90.56  Aligned_cols=51  Identities=25%  Similarity=0.318  Sum_probs=46.4

Q ss_pred             CCCCcEEEEeecCCCC-CCCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           76 TSDGLKYYDIVEGKGP-VAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        76 ~psGL~y~dlk~G~G~-~p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      .++||+|.++++|+|. .|+.||+|.+||+|++ ||++||||+++.         +|++|.+
T Consensus         8 ~d~Gl~~~il~~G~G~~~p~~gd~V~v~y~~~l~dG~v~dss~~~~---------~p~~f~~   60 (118)
T d1r9ha_           8 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRG---------DQFSFNL   60 (118)
T ss_dssp             CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHT---------SCEEEET
T ss_pred             CCCCEEEEEEECcCCCCCCCCCCEEEEEEEEEEcCCCEEEEccccc---------eeeeeec
Confidence            4579999999999996 4999999999999999 999999999875         7999875

>d1kt1a2 d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

Probab=99.21  E-value=1.6e-12  Score=91.10  Aligned_cols=51  Identities=22%  Similarity=0.253  Sum_probs=31.7

Q ss_pred             CCCCcEEEEeecCCCCC-CCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           76 TSDGLKYYDIVEGKGPV-AQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        76 ~psGL~y~dlk~G~G~~-p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      .++||+|+++++|+|.. |+.||+|.|||+|++ ||++||||+++.         +|++|.+
T Consensus         2 ~d~Gi~~~i~~~G~g~~~P~~gd~V~v~y~~~l~dG~~~dss~~~~---------~p~~f~l   54 (111)
T d1kt1a2           2 KDRGVLKIVKRVGHGEETPMIGDRVYVHYNGKLANGKKFDSSHDRN---------EPFVFSI   54 (111)
T ss_dssp             CSCSCEEEC----CCSCCCCTTCEEEEECCCCSCC---------------------CEEEET
T ss_pred             CCCCeEEEEEEcccCCcCCCCCCEEEEEEEEEECCCCEEEEEEecc---------eeeeeec
Confidence            46899999999999975 999999999999999 999999999875         7999875

>d1pbka_ d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP25
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=9.7e-11  Score=82.08  Aligned_cols=55  Identities=13%  Similarity=0.097  Sum_probs=44.6

Q ss_pred             CcEEEEeecCCCCC-CCCCCEEEEEEEEEe-CCeEeeeccccccccCCccccccEEEEE
Q 032561           79 GLKYYDIVEGKGPV-AQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEVYLGFV  135 (138)
Q Consensus        79 GL~y~dlk~G~G~~-p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~~~G~r~i~eP~~F~v  135 (138)
                      .+.+.++++|+|.. |+.||+|.|||+|++ ||++||||++...  -.+...+|++|.+
T Consensus         2 ~~~k~vl~~G~G~~~P~~gd~V~v~y~~~l~dG~~fdss~~~~~--~~~~~~~p~~f~l   58 (116)
T d1pbka_           2 KYTKSVLKKGDKTNFPKKGDVVHCWYTGTLQDGTVFDTNIQTSA--KKKKNAKPLSFKV   58 (116)
T ss_dssp             CEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCSSC--CTTTSSCCEEEET
T ss_pred             cceEEEEecCCCCCCCCCCCEEEEEEEEEECCCCEeeccccccc--ccccCCCceeeee
Confidence            46789999999965 999999999999999 9999999986531  1222347999975

>d1kt1a3 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

Probab=98.67  E-value=1.8e-08  Score=69.44  Aligned_cols=42  Identities=19%  Similarity=0.242  Sum_probs=38.1

Q ss_pred             eCCCCcEEEEeecCCCC-CCCCCCEEEEEEEEEeCCeEeeecc
Q 032561           75 TTSDGLKYYDIVEGKGP-VAQKGSTVQVHFDCIFRGITAVSSR  116 (138)
Q Consensus        75 t~psGL~y~dlk~G~G~-~p~~Gd~V~VhY~G~ldG~~FDSS~  116 (138)
                      +.++||.|+++++|+|. .|+.||+|.|||+|+++|++|+++.
T Consensus         5 ~~D~gi~k~il~~G~G~~~p~~gd~V~v~y~g~~~g~~~~~~~   47 (115)
T d1kt1a3           5 LEDGGIIRRTKRRGEGYSNPNEGARVQIHLEGRCGGRVFDCRD   47 (115)
T ss_dssp             TSSSSEEEEEEECCCCSSCCCTTCEEEEEEEEEETTEEEEEEE
T ss_pred             ccCCCEEEEEEEeecCCCCCCCCCEEEEEEEEEeCCccccccc
Confidence            45789999999999994 6999999999999999999999774

>d1q1ca2 d.26.1.1 (A:141-257) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=2e-07  Score=64.38  Aligned_cols=43  Identities=14%  Similarity=0.189  Sum_probs=35.7

Q ss_pred             CCCCcEEEEeecCCCC-CCCCCCEEEEEEEEEeCCeEeeecccc
Q 032561           76 TSDGLKYYDIVEGKGP-VAQKGSTVQVHFDCIFRGITAVSSRES  118 (138)
Q Consensus        76 ~psGL~y~dlk~G~G~-~p~~Gd~V~VhY~G~ldG~~FDSS~~r  118 (138)
                      .++||.|+++++|+|. .|..||.|.|||+|++++.+||++...
T Consensus         6 ~D~gi~~~il~~G~G~~~p~~gd~V~v~y~g~~~~~~~~~~~~~   49 (117)
T d1q1ca2           6 EDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELR   49 (117)
T ss_dssp             CSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEETTEEEEEEEEE
T ss_pred             CCCCEEEEEEeeecCCCCCCCCCEEEEEEEEEeCCCcEeecccc
Confidence            3479999999999995 699999999999999944467766543

>d1ix5a_ d.26.1.1 (A:) Archaeal FKBP {Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Archaeal FKBP
species: Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]

Probab=97.89  E-value=1.7e-06  Score=63.01  Aligned_cols=43  Identities=19%  Similarity=0.074  Sum_probs=31.3

Q ss_pred             CCCCCEEEEEEEEEe-CCeEeeecccccc----ccCCccccccEEEEE
Q 032561           93 AQKGSTVQVHFDCIF-RGITAVSSRESKL----LAGNRSIAEVYLGFV  135 (138)
Q Consensus        93 p~~Gd~V~VhY~G~l-dG~~FDSS~~r~~----~~G~r~i~eP~~F~v  135 (138)
                      +++|+.|.+||+|++ ||++||||++...    .--.....+|++|.+
T Consensus         2 v~~G~~V~v~Y~~~~~~G~~fdsT~e~~~~~~~~~~~~~~~~P~~f~~   49 (151)
T d1ix5a_           2 VDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVV   49 (151)
T ss_dssp             CCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEET
T ss_pred             ccCCCEEEEEEEEEECCCCEEEeCchHhcccccccccccCCCCEEEEe
Confidence            679999999999999 9999999986410    000111237999974

>d1hxva_ d.26.1.1 (A:) Trigger factor PPIase domain {Mycoplasma genitalium [TaxId: 2097]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Mycoplasma genitalium [TaxId: 2097]

Probab=96.92  E-value=0.00048  Score=44.82  Aligned_cols=26  Identities=15%  Similarity=0.220  Sum_probs=22.9

Q ss_pred             CCCCCEEEEEEEEEeCCeEeeecccc
Q 032561           93 AQKGSTVQVHFDCIFRGITAVSSRES  118 (138)
Q Consensus        93 p~~Gd~V~VhY~G~ldG~~FDSS~~r  118 (138)
                      +.+||.|+|+|+|++||+.|+++...
T Consensus         2 ~a~GD~V~idy~g~~dG~~~~~~~~~   27 (85)
T d1hxva_           2 LANGDIAIIDFTGIVDNKKLASASAQ   27 (85)
T ss_dssp             CCSSEEEEEEEEEEETTEECSTTCCS
T ss_pred             CCCCCEEEEEEEEEECCEEccccccc
Confidence            67899999999999999999987543

>d1t11a3 d.26.1.1 (A:135-247) Trigger factor PPIase domain {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Vibrio cholerae [TaxId: 666]

Probab=88.47  E-value=0.12  Score=34.49  Aligned_cols=24  Identities=21%  Similarity=0.360  Sum_probs=21.1

Q ss_pred             CCCCCCEEEEEEEEEeCCeEeeec
Q 032561           92 VAQKGSTVQVHFDCIFRGITAVSS  115 (138)
Q Consensus        92 ~p~~Gd~V~VhY~G~ldG~~FDSS  115 (138)
                      .++.||.|.|+|.|++||+.|+..
T Consensus        23 ~a~~gD~v~id~~~~~dG~~~~~~   46 (113)
T d1t11a3          23 AAENGKRVSIDFVGSIDGVEFEGG   46 (113)
T ss_dssp             CCCTTCEEEEEEEEESSSSCCTTC
T ss_pred             cccCCCEEEEEEEEEECCEEccCC
Confidence            478999999999999999888754

>d1l1pa_ d.26.1.1 (A:) Trigger factor PPIase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Escherichia coli [TaxId: 562]

Probab=88.19  E-value=0.1  Score=34.66  Aligned_cols=25  Identities=12%  Similarity=0.132  Sum_probs=21.5

Q ss_pred             CCCCCCCEEEEEEEEEeCCeEeeec
Q 032561           91 PVAQKGSTVQVHFDCIFRGITAVSS  115 (138)
Q Consensus        91 ~~p~~Gd~V~VhY~G~ldG~~FDSS  115 (138)
                      ..++.||.|.|+|+|+.||+.|++.
T Consensus        13 r~a~~GD~v~id~~~~~dG~~~~~~   37 (106)
T d1l1pa_          13 GAVEAEDRVTIDFTGSVDGEEFEGG   37 (106)
T ss_dssp             SSCCTTEEEEEEEECCSSSSCCSTT
T ss_pred             ccccCCCEEEEEEEEEECCEECCCC
Confidence            4478999999999998899998754