Citrus Sinensis ID: 032640

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130------
Protein Sequence
MRRHSTMSEERLIRREPKERRRIIMMDPVIWHKIAAVSGVAALGLGTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITKNPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLLF
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHccccccccccHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcHHHHHHHcccccccccccHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
mrrhstmseerlIRREPKERRRIIMMDPVIWHKIAAVSGVAalglgtygahgfkpqnpsfkeVWQTASLYHLVHTAALVaapitknpnifgGLLTAGILAFSGTCYTVafledrkystlapfggFAFIGAWASLLF
Flexible Loop (DISEMBL)
mrrhstmseerlirrepkerrriiMMDPVIWHKIAAVSGVAALGLGTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITKNPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLLF
Low Complexity Region (SEG)
MRRHSTMSeerlirrepkerrriiMMDPVIWHKIaavsgvaalglgTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITKNPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLLF
Disordered region (IsUnstruct)
*********************RIIMMDPVIWHKIAAVSGVAALGLGTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITKNPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLL*
Disordered Region (DISOPRED)
****************************VIWHKIAAVSGVAALGLGTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITKNPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLLF
Disordered Region (DISEMBL)
***********LIRREPKERRRIIMMDPVIWHKIAAVSGVAALGLGTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITKNPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLLF
Disordered Region (DISPRO)
**********************IIMMDPVIWHKIAAVSGVAALGLGTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITKNPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLLF
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRRHSTMSEERLIRREPKERRRIIMMDPVIWHKIAAVSGVAALGLGTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITKNPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLLF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	136	2.2.26 [Sep-21-2011]
A4K526	114	Transmembrane protein 256	N/A	no	0.772	0.921	0.411	1e-16
Q568J8	114	Transmembrane protein 256	yes	no	0.757	0.903	0.361	3e-12
Q5F285	113	Transmembrane protein 256	yes	no	0.764	0.920	0.365	1e-10
Q9P7G8	118	UPF0382 membrane protein	yes	no	0.772	0.889	0.344	3e-10
Q2KI29	113	Transmembrane protein 256	yes	no	0.669	0.805	0.362	2e-09
Q49VD3	120	UPF0382 membrane protein	yes	no	0.75	0.85	0.333	3e-09
Q2YS64	122	UPF0382 membrane protein	yes	no	0.75	0.836	0.314	4e-09
P39619	123	UPF0382 membrane protein	yes	no	0.720	0.796	0.311	1e-08
Q5HI93	122	UPF0382 membrane protein	yes	no	0.75	0.836	0.305	2e-08
Q6GJ86	122	UPF0382 membrane protein	yes	no	0.75	0.836	0.305	2e-08

>sp|A4K526|TM256_BUFGR Transmembrane protein 256 homolog OS=Bufo gargarizans PE=3 SV=1

 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/107 (41%), Positives = 66/107 (61%), Gaps = 2/107 (1%)

Query: 30  IWHKIAAVSGVAALGLGTYGAHGFK--PQNPSFKEVWQTASLYHLVHTAALVAAPITKNP 87
           +W ++ AVSG  A+  G YGAHGF+   ++   KE+++T + YH +H+ AL+A P  + P
Sbjct: 6   VWGRLGAVSGALAVTAGAYGAHGFRRSDRDEYLKELFETGNRYHFLHSLALLAVPHCRRP 65

Query: 88  NIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASL 134
            + G LLT+GI+ FSGT Y  A   D   +  AP+GG   I  WA++
Sbjct: 66  LLAGSLLTSGIVLFSGTFYYQALSGDPTLTKAAPYGGTLLILGWAAM 112

Bufo bufo gargarizans (taxid: 30331)

>sp|Q568J8|TM256_DANRE Transmembrane protein 256 OS=Danio rerio GN=tmem256 PE=3 SV=1

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 2/105 (1%)

Query: 32  HKIAAVSGVAALGLGTYGAHGFKPQNPSF--KEVWQTASLYHLVHTAALVAAPITKNPNI 89
            ++A +SG  A+  G YGAHGF+    S   +E++ TA+ YH  H+ AL+ A   + P +
Sbjct: 8   QRVAGISGALAVAAGAYGAHGFRRSEASDYQRELFDTANKYHFYHSLALLGAARCRKPAL 67

Query: 90  FGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASL 134
            G +L  G+  F G  Y      D  +S LAP GG   I  WA++
Sbjct: 68  AGVILLTGMGCFCGPLYHQPLTNDPSFSKLAPIGGSLLIVGWAAM 112

Danio rerio (taxid: 7955)

>sp|Q5F285|TM256_MOUSE Transmembrane protein 256 OS=Mus musculus GN=Tmem256 PE=2 SV=1

 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 55/104 (52%)

Query: 33  KIAAVSGVAALGLGTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITKNPNIFGG 92
           ++ A+SG  ALGL +YGAHG +  +   KE++  A+ +H +H+ AL+  P  + P   G 
Sbjct: 10  RLGALSGAGALGLASYGAHGAQFPDAYGKELFDKANKHHFLHSLALLGVPSCRKPVWAGL 69

Query: 93  LLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLLF 136
           LL +G   F  + Y  A   D    TL P GG   I  W +L F
Sbjct: 70  LLASGTTLFCTSFYYQALSGDTSIQTLGPVGGSLLILGWLALAF 113

Mus musculus (taxid: 10090)

>sp|Q9P7G8|YLKC_SCHPO UPF0382 membrane protein C1782.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1782.12c PE=3 SV=1

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 11/116 (9%)

Query: 30  IWHKIAAVSGVAALGLGTYGAHGFKP--QNPSFKEVWQTASLYHLVHTAALVAA---PIT 84
           IW+ +AA++G+ ++GLG YG+HG +   Q+P   + W TA  Y + H+ A +A    P+ 
Sbjct: 3   IWN-VAALTGLLSVGLGAYGSHGLQKRVQDPHLLKSWSTACTYLMFHSLATMAVSLHPVY 61

Query: 85  KNPNIFGGLLTAGILAFSGTCYTVAFLED-----RKYSTLAPFGGFAFIGAWASLL 135
                 G LL  G   FSGT Y +  L       R    L P GG   +  WA++L
Sbjct: 62  GKSRWTGPLLITGSCLFSGTIYGLCLLPKGHSLRRILGPLTPIGGLVMLTGWATML 117

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q2KI29|TM256_BOVIN Transmembrane protein 256 OS=Bos taurus GN=TMEM256 PE=3 SV=1

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 51/91 (56%)

Query: 31  WHKIAAVSGVAALGLGTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITKNPNIF 90
           + ++ A+SG  ALGL +YGAHG +  +   KE++   + +H +H+ AL+A P+ + P   
Sbjct: 8   FRRLGALSGAGALGLASYGAHGAQFPDAYGKELFDKTNKHHFLHSLALLAVPLCRKPLWA 67

Query: 91  GGLLTAGILAFSGTCYTVAFLEDRKYSTLAP 121
           G LL +G   F  T Y  A   D  +  LAP
Sbjct: 68  GLLLASGTTLFCTTFYYQALSGDPSFQNLAP 98

Bos taurus (taxid: 9913)

>sp|Q49VD3|Y2132_STAS1 UPF0382 membrane protein SSP2132 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP2132 PE=3 SV=2

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 6/108 (5%)

Query: 34  IAAVSGVAALGLGTYGAHGFKPQ-NPSFKEVWQTASLYHLVHTAALVAAPITK-----NP 87
           + A++ + A+G G +GAHG + + +  +  VW+ A+ Y + H   L+A  I       N 
Sbjct: 7   LGALNAMMAVGTGAFGAHGLENKLSAKYLSVWEKATTYQMYHGLGLLAIGIISGTTSINV 66

Query: 88  NIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLL 135
           N  G LL  GI+ FSG+ Y +A  + R    + P GG  FI  W  L+
Sbjct: 67  NWVGWLLFFGIVFFSGSLYILALTQIRIIGAITPIGGVLFIVGWLMLV 114

Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) (taxid: 342451)

>sp|Q2YS64|Y533_STAAB UPF0382 membrane protein SAB0533 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0533 PE=3 SV=1

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 6/108 (5%)

Query: 34  IAAVSGVAALGLGTYGAHGFKPQ-NPSFKEVWQTASLYHLVHTAAL-----VAAPITKNP 87
           + A++ + A+G G +GAHG + + +  +  VW+ A+ Y + H  AL     ++   + N 
Sbjct: 7   LGALNAMMAVGTGAFGAHGLQGKISDHYLSVWEKATTYQMYHGLALLIIGVISGTTSINV 66

Query: 88  NIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLL 135
           N  G L+ AGI+ FSG+ Y +   + +   T+ P GG  FI  W  L+
Sbjct: 67  NWAGWLIFAGIIFFSGSLYILVLTQIKVLGTITPIGGVLFIIGWIMLI 114

Staphylococcus aureus (strain bovine RF122 / ET3-1) (taxid: 273036)

>sp|P39619|YWDK_BACSU UPF0382 membrane protein YwdK OS=Bacillus subtilis (strain 168) GN=ywdK PE=2 SV=2

 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 8/106 (7%)

Query: 34  IAAVSGVAALGLGTYGAHGFKPQNPS-FKEVWQTASLYHLVHTAALVAAPITKNP----- 87
           + A++ + A+GLG +GAHG + + P  + +VW T   YH+ H   L       +      
Sbjct: 7   LGAINALLAVGLGAFGAHGLEGKIPDKYLQVWHTGVQYHMYHALGLFVVAFLADKLSGIG 66

Query: 88  --NIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAW 131
                G L+ AGI+ FSG+ Y ++  +      + P GG AFI +W
Sbjct: 67  SVTTAGWLMFAGIVLFSGSLYILSVTQISILGAITPLGGVAFIISW 112

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|Q5HI93|Y629_STAAC UPF0382 membrane protein SACOL0629 OS=Staphylococcus aureus (strain COL) GN=SACOL0629 PE=3 SV=1

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 6/108 (5%)

Query: 34  IAAVSGVAALGLGTYGAHGFKPQ-NPSFKEVWQTASLYHLVHTAAL-----VAAPITKNP 87
           + A++ + A+G G +GAHG + + +  +  VW+ A+ Y + H  AL     ++   + N 
Sbjct: 7   LGALNAMMAVGTGAFGAHGLQGKISDHYLSVWEKATTYQMYHGLALLIIGVISGTTSINV 66

Query: 88  NIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLL 135
           N  G L+ AGI+ FSG+ Y +   + +    + P GG  FI  W  L+
Sbjct: 67  NWAGWLIFAGIIFFSGSLYILVLTQIKVLGAITPIGGVLFIIGWIMLI 114

Staphylococcus aureus (strain COL) (taxid: 93062)

>sp|Q6GJ86|Y588_STAAR UPF0382 membrane protein SAR0588 OS=Staphylococcus aureus (strain MRSA252) GN=SAR0588 PE=3 SV=1

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 6/108 (5%)

Query: 34  IAAVSGVAALGLGTYGAHGFKPQ-NPSFKEVWQTASLYHLVHTAAL-----VAAPITKNP 87
           + A++ + A+G G +GAHG + + +  +  VW+ A+ Y + H  AL     ++   + N 
Sbjct: 7   LGALNAMMAVGTGAFGAHGLQGKISDHYLSVWEKATTYQMYHGLALLIIGVISGTTSINV 66

Query: 88  NIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLL 135
           N  G L+ AGI+ FSG+ Y +   + +    + P GG  FI  W  L+
Sbjct: 67  NWAGWLIFAGIIFFSGSLYILVLTQIKVLGAITPIGGVLFIIGWIMLI 114

Staphylococcus aureus (strain MRSA252) (taxid: 282458)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
449453600	111	PREDICTED: UPF0451 protein C17orf61 homo	0.816	1.0	0.891	2e-52
224129146	111	predicted protein [Populus trichocarpa]	0.816	1.0	0.900	3e-52
357493213	111	hypothetical protein MTR_5g085420 [Medic	0.816	1.0	0.873	4e-52
242038113	138	hypothetical protein SORBIDRAFT_01g00793	1.0	0.985	0.686	3e-51
351725601	111	uncharacterized protein LOC100527017 [Gl	0.816	1.0	0.864	4e-51
363806728	114	uncharacterized protein LOC100816932 [Gl	0.816	0.973	0.855	1e-50
297831576	128	hypothetical protein ARALYDRAFT_899300 [	0.911	0.968	0.766	4e-49
18395895	128	uncharacterized protein [Arabidopsis tha	0.911	0.968	0.758	7e-49
357115425	117	PREDICTED: UPF0451 protein C17orf61 homo	0.852	0.991	0.801	7e-49
116781921	123	unknown [Picea sitchensis] gi|116783158|	0.852	0.943	0.767	3e-48

>gi|449453600|ref|XP_004144544.1| PREDICTED: UPF0451 protein C17orf61 homolog [Cucumis sativus] gi|449517667|ref|XP_004165866.1| PREDICTED: UPF0451 protein C17orf61 homolog [Cucumis sativus]

 Score =  210 bits (534), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 99/111 (89%), Positives = 108/111 (97%)

Query: 26  MDPVIWHKIAAVSGVAALGLGTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITK 85
           M+P+ WHK+AA+SGVAALGLGTYGAHGFKP+NP++KEVWQTASLYHLVHTAAL+AAP TK
Sbjct: 1   MNPLYWHKVAAISGVAALGLGTYGAHGFKPKNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 86  NPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLLF 136
           NPNIFGGLLTAGILAFSGTCYTVA LEDRKYS+LAPFGGFAFIGAWASLLF
Sbjct: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSSLAPFGGFAFIGAWASLLF 111

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129146|ref|XP_002320512.1| predicted protein [Populus trichocarpa] gi|222861285|gb|EEE98827.1| predicted protein [Populus trichocarpa]

 Score =  209 bits (531), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 100/111 (90%), Positives = 107/111 (96%)

Query: 26  MDPVIWHKIAAVSGVAALGLGTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITK 85
           MDP +WH+IAAVSGVAALGLGTYGAH FKP+NP++KEVWQTASLYHLVHTAAL+AAPITK
Sbjct: 1   MDPSMWHRIAAVSGVAALGLGTYGAHVFKPENPTYKEVWQTASLYHLVHTAALLAAPITK 60

Query: 86  NPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLLF 136
           +PNIFGGLLT GILAFSGTCYTVA LEDRKYSTLAPFGGFAFIGAWASLLF
Sbjct: 61  HPNIFGGLLTTGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 111

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357493213|ref|XP_003616895.1| hypothetical protein MTR_5g085420 [Medicago truncatula] gi|355518230|gb|AES99853.1| hypothetical protein MTR_5g085420 [Medicago truncatula] gi|388518471|gb|AFK47297.1| unknown [Medicago truncatula]

 Score =  209 bits (531), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 97/111 (87%), Positives = 106/111 (95%)

Query: 26  MDPVIWHKIAAVSGVAALGLGTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITK 85
           M+P+IWHK+AA+SGVAALGLGTYGAH FKPQNP++K+VW TASLYHLVHTAALV+APITK
Sbjct: 1   MNPLIWHKVAAISGVAALGLGTYGAHAFKPQNPTYKDVWHTASLYHLVHTAALVSAPITK 60

Query: 86  NPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLLF 136
           NPN+FGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFI AW SL F
Sbjct: 61  NPNVFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIAAWGSLFF 111

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242038113|ref|XP_002466451.1| hypothetical protein SORBIDRAFT_01g007930 [Sorghum bicolor] gi|241920305|gb|EER93449.1| hypothetical protein SORBIDRAFT_01g007930 [Sorghum bicolor]

 Score =  206 bits (523), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 94/137 (68%), Positives = 119/137 (86%), Gaps = 1/137 (0%)

Query: 1   MRRHSTMSEERLIRREPKERRRIIM-MDPVIWHKIAAVSGVAALGLGTYGAHGFKPQNPS 59
           +++ + ++ +R  +R  KE+R+++  MDP++WHK+AAVSG+AALGLGTYGAH F+P+NP+
Sbjct: 2   LKQTAVVASQRRPKRRTKEKRKMVAPMDPMLWHKVAAVSGIAALGLGTYGAHMFRPKNPA 61

Query: 60  FKEVWQTASLYHLVHTAALVAAPITKNPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTL 119
           +KEVW TASLYHLVHTAAL+ APITK PN+FGGLLTAGI+ FSGTCYTVA+LEDRK S+ 
Sbjct: 62  YKEVWHTASLYHLVHTAALLGAPITKRPNVFGGLLTAGIVLFSGTCYTVAYLEDRKLSSP 121

Query: 120 APFGGFAFIGAWASLLF 136
           AP GGFAFI AWASLLF
Sbjct: 122 APLGGFAFIAAWASLLF 138

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725601|ref|NP_001237354.1| uncharacterized protein LOC100527017 [Glycine max] gi|255631372|gb|ACU16053.1| unknown [Glycine max]

 Score =  205 bits (522), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 96/111 (86%), Positives = 105/111 (94%)

Query: 26  MDPVIWHKIAAVSGVAALGLGTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITK 85
           MDP +WHK+AA+SGVAALGLGTYGAH FKPQNP++K+VW TASLYHLVHTAALVAAPITK
Sbjct: 1   MDPQVWHKVAAISGVAALGLGTYGAHVFKPQNPAYKDVWHTASLYHLVHTAALVAAPITK 60

Query: 86  NPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLLF 136
           +PN+FGGLLTAGILAFSGTCYTVAFLEDRKYST+APFGGFAFI AW SL F
Sbjct: 61  HPNVFGGLLTAGILAFSGTCYTVAFLEDRKYSTMAPFGGFAFIAAWGSLFF 111

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806728|ref|NP_001242016.1| uncharacterized protein LOC100816932 [Glycine max] gi|255640740|gb|ACU20654.1| unknown [Glycine max]

 Score =  204 bits (518), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 95/111 (85%), Positives = 104/111 (93%)

Query: 26  MDPVIWHKIAAVSGVAALGLGTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITK 85
           MDP +WHK+AA+SGVAALGLGTYGAH FKPQNP++ +VW TASLYHLVHTAALVAAPITK
Sbjct: 4   MDPQLWHKVAAISGVAALGLGTYGAHVFKPQNPAYNDVWHTASLYHLVHTAALVAAPITK 63

Query: 86  NPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLLF 136
           +PN+FGGLLTAGILAFSGTCYTVAFLEDRKYST+APFGGFAFI AW SL F
Sbjct: 64  HPNVFGGLLTAGILAFSGTCYTVAFLEDRKYSTMAPFGGFAFIAAWGSLFF 114

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297831576|ref|XP_002883670.1| hypothetical protein ARALYDRAFT_899300 [Arabidopsis lyrata subsp. lyrata] gi|297329510|gb|EFH59929.1| hypothetical protein ARALYDRAFT_899300 [Arabidopsis lyrata subsp. lyrata]

 Score =  199 bits (505), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 95/124 (76%), Positives = 108/124 (87%)

Query: 13  IRREPKERRRIIMMDPVIWHKIAAVSGVAALGLGTYGAHGFKPQNPSFKEVWQTASLYHL 72
           +R   ++ R    MDP IWHK+AA+SG+AALGLGTYGAH FKP+NPS+K+VWQTASLYHL
Sbjct: 5   VRSNLRDIRGRRSMDPRIWHKVAAISGMAALGLGTYGAHVFKPENPSYKQVWQTASLYHL 64

Query: 73  VHTAALVAAPITKNPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWA 132
           VHTAALV+AP TK PNIFGGLLTAGI+AFSGTCY VA  EDRK+STLAPFGGFAFI AWA
Sbjct: 65  VHTAALVSAPSTKYPNIFGGLLTAGIVAFSGTCYMVALREDRKFSTLAPFGGFAFIAAWA 124

Query: 133 SLLF 136
           +LLF
Sbjct: 125 TLLF 128

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18395895|ref|NP_565317.1| uncharacterized protein [Arabidopsis thaliana] gi|20197981|gb|AAM15336.1| expressed protein [Arabidopsis thaliana] gi|20198199|gb|AAD25581.2| expressed protein [Arabidopsis thaliana] gi|330250789|gb|AEC05883.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  198 bits (503), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 94/124 (75%), Positives = 108/124 (87%)

Query: 13  IRREPKERRRIIMMDPVIWHKIAAVSGVAALGLGTYGAHGFKPQNPSFKEVWQTASLYHL 72
           +R   ++ R    MDP +WHK+AA+SG+AALGLGTYGAH FKP+NPS+K+VWQTASLYHL
Sbjct: 5   VRSNLRDIRGRRSMDPRMWHKVAAISGMAALGLGTYGAHVFKPENPSYKQVWQTASLYHL 64

Query: 73  VHTAALVAAPITKNPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWA 132
           VHTAALV+AP TK PNIFGGLLTAGI+AFSGTCY VA  EDRK+STLAPFGGFAFI AWA
Sbjct: 65  VHTAALVSAPSTKYPNIFGGLLTAGIVAFSGTCYMVALREDRKFSTLAPFGGFAFIAAWA 124

Query: 133 SLLF 136
           +LLF
Sbjct: 125 TLLF 128

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357115425|ref|XP_003559489.1| PREDICTED: UPF0451 protein C17orf61 homolog [Brachypodium distachyon]

 Score =  198 bits (503), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 93/116 (80%), Positives = 104/116 (89%)

Query: 21  RRIIMMDPVIWHKIAAVSGVAALGLGTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVA 80
           R +I  DP++WHK+AAVSGVAALGLGTYGAH F+PQNP +KE+WQTASLYHLVHTAALV 
Sbjct: 2   RMVIPTDPMLWHKVAAVSGVAALGLGTYGAHMFRPQNPRYKEIWQTASLYHLVHTAALVG 61

Query: 81  APITKNPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLLF 136
           APITK PNIFGGLLT GI+ FSGTCYTVA+LEDRK+S+ AP GGFAFI AWASLLF
Sbjct: 62  APITKRPNIFGGLLTTGIVLFSGTCYTVAYLEDRKFSSPAPIGGFAFIAAWASLLF 117

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116781921|gb|ABK22296.1| unknown [Picea sitchensis] gi|116783158|gb|ABK22815.1| unknown [Picea sitchensis]

 Score =  196 bits (498), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 89/116 (76%), Positives = 106/116 (91%)

Query: 21  RRIIMMDPVIWHKIAAVSGVAALGLGTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVA 80
           R +  MDP++WHK+A +SG+AALGLGTYGAH FKP NP++KEVW TASLYHL+HTAA++A
Sbjct: 8   RGVREMDPLVWHKVAGISGIAALGLGTYGAHMFKPANPAYKEVWHTASLYHLIHTAAMLA 67

Query: 81  APITKNPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLLF 136
           AP TK+P+IFG LLT+GI+AFSGTCYTVA LEDRKYS++APFGGFAFIGAWASLLF
Sbjct: 68  APATKHPHIFGALLTSGIIAFSGTCYTVALLEDRKYSSMAPFGGFAFIGAWASLLF 123

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
TAIR|locus:2045019	128	AT2G04900 "AT2G04900" [Arabido	0.816	0.867	0.738	4e-42
DICTYBASE|DDB_G0269766	120	DDB_G0269766 "DUF423 family pr	0.757	0.858	0.355	1.8e-14
WB|WBGene00013720	156	Y106G6H.8 [Caenorhabditis eleg	0.764	0.666	0.367	4.4e-13
ZFIN|ZDB-GENE-050417-92	114	tmem256 "transmembrane protein	0.639	0.763	0.370	3.5e-11
UNIPROTKB|G4N0Y0	149	MGG_09572 "Uncharacterized pro	0.808	0.738	0.316	4.1e-10
UNIPROTKB|Q2KI29	113	TMEM256 "Transmembrane protein	0.647	0.778	0.340	1.8e-09
UNIPROTKB|I3LRP5	113	LOC100621827 "Uncharacterized	0.808	0.973	0.288	3.6e-09
MGI|MGI:1916436	113	Tmem256 "transmembrane protein	0.661	0.796	0.344	3.6e-09
UNIPROTKB|E2R9L6	113	C5H17orf61 "Uncharacterized pr	0.647	0.778	0.340	4.7e-09
UNIPROTKB|Q88AF8	126	PSPTO_0432 "Uncharacterized pr	0.639	0.690	0.361	7.6e-09

TAIR|locus:2045019 AT2G04900 "AT2G04900" [Arabidopsis thaliana (taxid:3702)]

 Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
 Identities = 82/111 (73%), Positives = 91/111 (81%)

Query:    26 MDPVIWHKIXXXXXXXXXXXXTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITK 85
             MDP +WHK+            TYGAH FKP+NPS+K+VWQTASLYHLVHTAALV+AP TK
Sbjct:    18 MDPRMWHKVAAISGMAALGLGTYGAHVFKPENPSYKQVWQTASLYHLVHTAALVSAPSTK 77

Query:    86 NPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLLF 136
              PNIFGGLLTAGI+AFSGTCY VA  EDRK+STLAPFGGFAFI AWA+LLF
Sbjct:    78 YPNIFGGLLTAGIVAFSGTCYMVALREDRKFSTLAPFGGFAFIAAWATLLF 128

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

DICTYBASE|DDB_G0269766 DDB_G0269766 "DUF423 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 38/107 (35%), Positives = 56/107 (52%)

Query:    30 IWHKIXXXXXXXXXXXXTYGAHGFKPQ--NPSFKEVWQTASLYHLVHTAALVAAPITKNP 87
             +W KI             YG HG K +  + + +++W+TA  YHL H+ AL   P +   
Sbjct:     4 LWWKIGGISACSAIISGAYGGHGLKKKVTDVARQDIWKTAQQYHLYHSFALFLVPFSTQQ 63

Query:    88 NIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASL 134
             NI G +   GIL FSG+ Y ++ L +RK   ++P GGF F+  W  L
Sbjct:    64 NIVGPMFLTGILLFSGSLYNLS-LTNRKIG-VSPIGGFLFMAGWVIL 108

GO:0044351 "macropinocytosis" evidence=RCA

WB|WBGene00013720 Y106G6H.8 [Caenorhabditis elegans (taxid:6239)]

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 43/117 (36%), Positives = 61/117 (52%)

Query:    26 MDPVIWHKIXXXXXXXXXXXXTYGAHGFKPQNPSFKE----VWQTASLYHLVHTAALVAA 81
             M P+I  ++             YG+H  +  NPS  E     + TAS YHL+H+ AL+A+
Sbjct:    45 MSPII--RLAGLSGAVAISLGAYGSHVLR-DNPSIDERRRTAFDTASRYHLIHSLALLAS 101

Query:    82 PITKNPNIFGGLLTAGILAFSGTCY--TVAFLED-RKYSTLAPFGGFAFIGAWASLL 135
             P  + P +  GL TAGI  F G CY  +++ +E  RKY+   P GG   I AW S +
Sbjct:   102 PAARFPLVTAGLFTAGITLFCGPCYHYSISGVETTRKYT---PIGGVTLIIAWLSFI 155

GO:0016021 "integral to membrane" evidence=IEA

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0007413 "axonal fasciculation" evidence=IMP

ZFIN|ZDB-GENE-050417-92 tmem256 "transmembrane protein 256" [Danio rerio (taxid:7955)]

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 33/89 (37%), Positives = 47/89 (52%)

Query:    48 YGAHGFKPQNPSF--KEVWQTASLYHLVHTAALVAAPITKNPNIFGGLLTAGILAFSGTC 105
             YGAHGF+    S   +E++ TA+ YH  H+ AL+ A   + P + G +L  G+  F G  
Sbjct:    24 YGAHGFRRSEASDYQRELFDTANKYHFYHSLALLGAARCRKPALAGVILLTGMGCFCGPL 83

Query:   106 YTVAFLEDRKYSTLAPFGGFAFIGAWASL 134
             Y      D  +S LAP GG   I  WA++
Sbjct:    84 YHQPLTNDPSFSKLAPIGGSLLIVGWAAM 112

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|G4N0Y0 MGG_09572 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 37/117 (31%), Positives = 58/117 (49%)

Query:    26 MDPVIWHKIXXXXXXXXXXXXTYGAHGFKPQ--NPSFKEVWQTASLYHLVHTAA-LVAAP 82
             M  + + ++             +GAHG K +  +P     W TA+ Y L+H+ A ++AA 
Sbjct:    24 MSALTYWRVGAVYGATAVAMGAFGAHGLKKRITDPQKIASWGTAAHYQLLHSGAVMLAAS 83

Query:    83 I-TKNPNIFGGLLTAGILAFSGTCYTVAFLEDR-KY-STLAPFGGFAFIGAWASLLF 136
             + T NP +  GL TAG+  FSG+ Y +    +R K+   + P GG   I  W +L F
Sbjct:    84 VGTGNP-VAAGLFTAGMTMFSGSIYALILDPERFKFLGPVTPIGGVCLIAGWIALGF 139

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q2KI29 TMEM256 "Transmembrane protein 256" [Bos taurus (taxid:9913)]

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 30/88 (34%), Positives = 46/88 (52%)

Query:    47 TYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITKNPNIFGGLLTAGILAFSGTCY 106
             +YGAHG +  +   KE++   + +H +H+ AL+A P+ + P   G LL +G   F  T Y
Sbjct:    24 SYGAHGAQFPDAYGKELFDKTNKHHFLHSLALLAVPLCRKPLWAGLLLASGTTLFCTTFY 83

Query:   107 TVAFLEDRKYSTLAPFGGFAFIGAWASL 134
               A   D  +  LAP GG   +  W +L
Sbjct:    84 YQALSGDPSFQNLAPVGGSLLLLGWLAL 111

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|I3LRP5 LOC100621827 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 32/111 (28%), Positives = 51/111 (45%)

Query:    25 MMDP-VIWHKIXXXXXXXXXXXXTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPI 83
             M  P  ++ ++            +YGAHG +  +   KE++   + +H +H+ AL+  P+
Sbjct:     1 MAGPGAVFRRLGALSGAGALGLASYGAHGAQFPDAYGKELFDKTNKHHFLHSLALLGVPL 60

Query:    84 TKNPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASL 134
              + P   G LL +G   F  + Y  A   D    TLAP GG   I  W +L
Sbjct:    61 CRKPLWAGLLLASGTTLFCTSFYYQALSGDPSIQTLAPVGGSLLILGWLAL 111

GO:0005743 "mitochondrial inner membrane" evidence=IEA

MGI|MGI:1916436 Tmem256 "transmembrane protein 256" [Mus musculus (taxid:10090)]

 Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 31/90 (34%), Positives = 45/90 (50%)

Query:    47 TYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITKNPNIFGGLLTAGILAFSGTCY 106
             +YGAHG +  +   KE++  A+ +H +H+ AL+  P  + P   G LL +G   F  + Y
Sbjct:    24 SYGAHGAQFPDAYGKELFDKANKHHFLHSLALLGVPSCRKPVWAGLLLASGTTLFCTSFY 83

Query:   107 TVAFLEDRKYSTLAPFGGFAFIGAWASLLF 136
               A   D    TL P GG   I  W +L F
Sbjct:    84 YQALSGDTSIQTLGPVGGSLLILGWLALAF 113

GO:0003674 "molecular_function" evidence=ND

GO:0005743 "mitochondrial inner membrane" evidence=IDA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E2R9L6 C5H17orf61 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 30/88 (34%), Positives = 45/88 (51%)

Query:    47 TYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITKNPNIFGGLLTAGILAFSGTCY 106
             +YGAHG +  +   KE++   + +H +H+ AL+  P  + P + G LL +G   F  + Y
Sbjct:    24 SYGAHGAQFPDAYGKELFDKTNRHHFLHSLALLGVPHCRKPLLAGLLLASGTTLFCTSFY 83

Query:   107 TVAFLEDRKYSTLAPFGGFAFIGAWASL 134
               A   D    TLAP GG   I  W +L
Sbjct:    84 YQALSGDPSIQTLAPIGGSLLILGWLAL 111

GO:0005743 "mitochondrial inner membrane" evidence=IEA

UNIPROTKB|Q88AF8 PSPTO_0432 "Uncharacterized protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)]

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 34/94 (36%), Positives = 45/94 (47%)

Query:    48 YGAHGFKPQ-NPSFKEVWQTASLYHLVHTAAL--VAAPITKNP----NIFGGLLTAGILA 100
             + AHG K + +  +  V+ T  LY L+H  AL  VA   T  P    N  G     GIL 
Sbjct:    22 FAAHGLKERLSAEYLAVFHTGVLYQLIHALALLGVAVLATHIPGRLINFAGFSFAIGILL 81

Query:   101 FSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASL 134
             FSG+ Y +      K   + PFGG AF+  W+ L
Sbjct:    82 FSGSLYALTLTGISKLGIITPFGGLAFLFGWSML 115

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	136
pfam04241	89	pfam04241, DUF423, Protein of unknown function (DU	6e-21
COG2363	124	COG2363, COG2363, Uncharacterized small membrane p	6e-15
PRK10873	131	PRK10873, PRK10873, hypothetical protein; Provisio	7e-10

>gnl|CDD|217983 pfam04241, DUF423, Protein of unknown function (DUF423)

 Score = 80.3 bits (199), Expect = 6e-21
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 7/89 (7%)

Query: 44  GLGTYGAHGFKPQ-NPSFKEVWQTASLYHLVHTAALVAAPI------TKNPNIFGGLLTA 96
            LG +GAHG K + +P   E ++TA  Y L H  AL+A  +      ++  N+ G L  A
Sbjct: 1   ALGAFGAHGLKKKLSPEQLEAFETAVQYQLYHALALLAVALLAKRVASRLLNLAGWLFLA 60

Query: 97  GILAFSGTCYTVAFLEDRKYSTLAPFGGF 125
           GIL FSG+ Y +A    +    + P GG 
Sbjct: 61  GILLFSGSLYALALTGIKLLGPITPIGGV 89

This family of proteins with unknown function is a possible integral membrane protein from Caenorhabditis elegans. This family of proteins has GO references indicating the protein is involved in nematode larval development and is a positive regulator of growth rate. Length = 89

>gnl|CDD|225238 COG2363, COG2363, Uncharacterized small membrane protein [Function unknown]

 Score = 65.8 bits (161), Expect = 6e-15
 Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 34  IAAVSGVAALGLGTYGAHGFKPQ-NPSFKEVWQTASLYHLVHTAALVAAPI-----TKNP 87
           +AA+SG  A+ LG +GAHG     +        T + Y + H  AL+A  +         
Sbjct: 8   LAALSGFLAVALGAFGAHGLAKALHDGELAWLGTGAQYQMFHALALLALGLLALRLRSTV 67

Query: 88  NIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLL 135
              G LL  GI+ FSG+ Y +A    R    + P GG  FI  W  L 
Sbjct: 68  RWAGWLLLLGIVLFSGSLYALALSGLRLLGAITPIGGVLFIAGWLLLA 115

Length = 124

>gnl|CDD|182798 PRK10873, PRK10873, hypothetical protein; Provisional

 Score = 52.8 bits (127), Expect = 7e-10
 Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 7/108 (6%)

Query: 35  AAVSGVAALGLGTYGAHGFKPQNPSFKEVW-QTASLYHLVHTAAL--VAAPITKNPNIF- 90
           AA+SG   + LG +GAH       + +  W QT   Y   HT A+  +A  + +  +I+ 
Sbjct: 10  AAISGFIYVALGAFGAHVLSKTLGAVEMGWIQTGLEYQAFHTLAILGLAVAMQRRISIWF 69

Query: 91  ---GGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLL 135
                 L  G + FSG+ Y +A    R ++ + P GG +F+  WA +L
Sbjct: 70  YWSSVFLALGTVLFSGSLYCLALSHLRLWAYITPVGGVSFLAGWALML 117

Length = 131

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	136
PRK10873	131	hypothetical protein; Provisional	100.0
KOG3472	112	consensus Predicted small membrane protein [Functi	100.0
COG2363	124	Uncharacterized small membrane protein [Function u	100.0
PF04241	89	DUF423: Protein of unknown function (DUF423); Inte	99.96

>PRK10873 hypothetical protein; Provisional

Probab=100.00  E-value=1.6e-38  Score=238.19  Aligned_cols=111  Identities=28%  Similarity=0.427  Sum_probs=101.8

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHhhcccCCC-CChhHHHHHHHHHHHHHHHHHHHHHhcc------cCchHHHHHHHHHhH
Q 032640           26 MDPVIWHKIAAVSGVAALGLGTYGAHGFKP-QNPSFKEVWQTASLYHLVHTAALVAAPI------TKNPNIFGGLLTAGI   98 (136)
Q Consensus        26 ~~~~~~~~l~al~Ga~aValGA~gAH~l~~-~~~~~~~~~~tA~~Y~~~HalaLl~~~~------~~~~~~a~~l~~~G~   98 (136)
                      |.+|.++++++++|+++|++||||||++|+ .+|+++++||||+|||+||++|+++++.      .+..+.++++|++|+
T Consensus         1 m~~~~~l~la~l~g~~aValGA~gAH~l~~~l~~~~~~~~~ta~~Yq~~HalaLl~~~~~~~~~~~~~~~~a~~l~~~G~   80 (131)
T PRK10873          1 MTSRFMLIFAAISGFIYVALGAFGAHVLSKTLGAVEMGWIQTGLEYQAFHTLAILGLAVAMQRRISIWFYWSSVFLALGT   80 (131)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Confidence            456788999999999999999999999999 7999999999999999999999998753      123568999999999


Q ss_pred             HHhhHHHHHHHhhCCCccccccchhHHHHHHHHHHhhC
Q 032640           99 LAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLLF  136 (136)
Q Consensus        99 ~lFsGsLY~~al~~~~~l~~itPiGG~~lIlGWl~la~  136 (136)
                      ++||||+|+++++++|+++++||+||++||+||+++++
T Consensus        81 ~lFsGSlY~~al~~~~~l~~itPiGG~~li~GWl~la~  118 (131)
T PRK10873         81 VLFSGSLYCLALSHLRLWAYITPVGGVSFLAGWALMLI  118 (131)
T ss_pred             HHHhHHHHHHHHcCCcccccCccHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999863

>KOG3472 consensus Predicted small membrane protein [Function unknown]

Probab=100.00  E-value=3.4e-36  Score=218.26  Aligned_cols=109  Identities=49%  Similarity=0.909  Sum_probs=105.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcccCCC-CChhHHHHHHHHHHHHHHHHHHHHHhcccCchHHHHHHHHHhHHHhhHHHH
Q 032640           28 PVIWHKIAAVSGVAALGLGTYGAHGFKP-QNPSFKEVWQTASLYHLVHTAALVAAPITKNPNIFGGLLTAGILAFSGTCY  106 (136)
Q Consensus        28 ~~~~~~l~al~Ga~aValGA~gAH~l~~-~~~~~~~~~~tA~~Y~~~HalaLl~~~~~~~~~~a~~l~~~G~~lFsGsLY  106 (136)
                      ++.|+++++++|+.++.+||||+|++|+ .|+++++.||||++||++|++|+++++..|++++.+.|++.|+.+|||++|
T Consensus         3 ~~~~~rlaalsGa~AlglgaYgahvlk~~pd~~~~~~~dtA~~yh~~HSlAlma~P~~~~p~~tg~Ll~tG~~lFsg~~Y   82 (112)
T KOG3472|consen    3 PMTFIRLAALSGAAALGLGAYGAHVLKDVPDPKELKSWDTANRYHFLHSLALMAVPVARKPLWTGGLLITGITLFSGTCY   82 (112)
T ss_pred             chHHHHHHHHhhHHHHhhhhhhhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHcCccccCcchhhhHHHHHHHHhcchhh
Confidence            4568999999999999999999999999 899999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhCCCccccccchhHHHHHHHHHHhhC
Q 032640          107 TVAFLEDRKYSTLAPFGGFAFIGAWASLLF  136 (136)
Q Consensus       107 ~~al~~~~~l~~itPiGG~~lIlGWl~la~  136 (136)
                      +++++++|.++++||+||++||++|+.+++
T Consensus        83 ~~aL~g~~~~~~lapiGG~~ll~aWltlll  112 (112)
T KOG3472|consen   83 YLALSGDRILQPLAPIGGFVLLAAWLTLLL  112 (112)
T ss_pred             eeeecCCcccccccccccHHHHHHHHHHhC
Confidence            999999999999999999999999999864

>COG2363 Uncharacterized small membrane protein [Function unknown]

Probab=100.00  E-value=1e-34  Score=215.93  Aligned_cols=108  Identities=32%  Similarity=0.526  Sum_probs=100.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcccCCC-CChhHHHHHHHHHHHHHHHHHHHHHhcc----cC-chHHHHHHHHHhHHHh
Q 032640           28 PVIWHKIAAVSGVAALGLGTYGAHGFKP-QNPSFKEVWQTASLYHLVHTAALVAAPI----TK-NPNIFGGLLTAGILAF  101 (136)
Q Consensus        28 ~~~~~~l~al~Ga~aValGA~gAH~l~~-~~~~~~~~~~tA~~Y~~~HalaLl~~~~----~~-~~~~a~~l~~~G~~lF  101 (136)
                      +|.++.+++++|+++|++||||+|++++ .++++.++|+|++||||+|++|++++..    .+ ..+++++++.+|+++|
T Consensus         2 ~~~~~~l~al~g~l~v~lGAfgah~l~~~~~~~~l~~~~Tg~~yqm~Halall~l~l~~~~~~~~~~~ag~ll~~Gi~LF   81 (124)
T COG2363           2 SKTFLILAALSGFLAVALGAFGAHGLAKALHDGELAWLGTGAQYQMFHALALLALGLLALRLRSTVRWAGWLLLLGIVLF   81 (124)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence            4668899999999999999999999998 7889999999999999999999998864    12 4588999999999999


Q ss_pred             hHHHHHHHhhCCCccccccchhHHHHHHHHHHhh
Q 032640          102 SGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLL  135 (136)
Q Consensus       102 sGsLY~~al~~~~~l~~itPiGG~~lIlGWl~la  135 (136)
                      |||||.+++++.|.++.+||+||++||+||++++
T Consensus        82 SGsLy~l~lsg~rllg~iTPiGG~~fi~GW~~l~  115 (124)
T COG2363          82 SGSLYALALSGLRLLGAITPIGGVLFIAGWLLLA  115 (124)
T ss_pred             cchHHHHHHcCcchhhccCCcchHHHHHHHHHHH
Confidence            9999999999999999999999999999999986

>PF04241 DUF423: Protein of unknown function (DUF423); InterPro: IPR006696 This is a potential integral membrane protein with no known function

Probab=99.96  E-value=2.6e-30  Score=182.08  Aligned_cols=82  Identities=35%  Similarity=0.611  Sum_probs=77.8

Q ss_pred             HHHHhhcccCCC-CChhHHHHHHHHHHHHHHHHHHHHHhc------ccCchHHHHHHHHHhHHHhhHHHHHHHhhCCCcc
Q 032640           44 GLGTYGAHGFKP-QNPSFKEVWQTASLYHLVHTAALVAAP------ITKNPNIFGGLLTAGILAFSGTCYTVAFLEDRKY  116 (136)
Q Consensus        44 alGA~gAH~l~~-~~~~~~~~~~tA~~Y~~~HalaLl~~~------~~~~~~~a~~l~~~G~~lFsGsLY~~al~~~~~l  116 (136)
                      ++||||+|++|+ .+++++++|+||+|||++|++|+++++      ..+..++++++|++|+++||||+|+++++++|++
T Consensus         1 alGA~gaH~l~~~~~~~~~~~~~tA~~y~~~Halall~~~~~~~~~~~~~~~~a~~l~~~G~~lFsGslY~~al~~~~~~   80 (89)
T PF04241_consen    1 ALGAFGAHGLKDQLSPEQLEWFQTAVQYQFIHALALLALGLLAQRRSSRLLRLAGWLFLLGTLLFSGSLYYLALTGPKSL   80 (89)
T ss_pred             ChHHHHhccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHhHHHHHHHHcCCccc
Confidence            479999999999 799999999999999999999999987      4677899999999999999999999999999999


Q ss_pred             ccccchhHH
Q 032640          117 STLAPFGGF  125 (136)
Q Consensus       117 ~~itPiGG~  125 (136)
                      +++||+||+
T Consensus        81 ~~itPiGG~   89 (89)
T PF04241_consen   81 GPITPIGGM   89 (89)
T ss_pred             ccCCCCCCC
Confidence            999999995

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00