Citrus Sinensis ID: 032718

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-----
Protein Sequence
MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLIYWTSHSE
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MDLAELWAIfgpgvagavfGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVrkedidyspyeegEWRLKLWLFLAYVVSFVSLAASVGLLIQDSlvktgpsawtgtaGVLQCVFVLISGLIYWTSHSE
Flexible Loop (DISEMBL)
MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLIYWTSHSE
Low Complexity Region (SEG)
MDLAELWAIfgpgvagavfgagwwfwIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLIYWTSHSE
Disordered region (IsUnstruct)
***AELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLIYWT****
Disordered Region (DISOPRED)
*****LWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLIYWTSHS*
Disordered Region (DISEMBL)
MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLIYWTSHSE
Disordered Region (DISPRO)
MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLIYWTSHS*
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (HMMTOP)
ooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLIYWTSHSE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	135	2.2.26 [Sep-21-2011]
Q9CXL1	157	Transmembrane protein 50A	yes	no	1.0	0.859	0.3	2e-09
O95807	157	Transmembrane protein 50A	yes	no	0.896	0.770	0.309	3e-09
Q54T60	156	Transmembrane protein 50	yes	no	0.8	0.692	0.284	1e-08
Q5R4C3	158	Transmembrane protein 50B	no	no	0.896	0.765	0.314	1e-07
A9CAZ8	158	Transmembrane protein 50B	N/A	no	0.896	0.765	0.314	1e-07
P56557	158	Transmembrane protein 50B	no	no	0.896	0.765	0.314	1e-07
Q3SZL9	158	Transmembrane protein 50B	no	no	0.896	0.765	0.314	1e-07
Q9D1X9	158	Transmembrane protein 50B	no	no	0.896	0.765	0.314	2e-07
Q12016	184	Vacuolar protein sorting-	yes	no	0.896	0.657	0.255	0.0001

>sp|Q9CXL1|TM50A_MOUSE Transmembrane protein 50A OS=Mus musculus GN=Tmem50a PE=2 SV=1

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 5/140 (3%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVH--YLPGIFASLAALMFNCV 58
           MD  E         AG +F  GWW  IDA V       F H  +  G+ A++A LM N V
Sbjct: 14  MDWGEKRNTIASIAAGVLFFTGWWIIIDAAVMYPRMDQFNHSYHTCGVIATIAFLMINAV 73

Query: 59  RKEDIDYSPYEEG---EWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAG 115
               +    Y EG   +   ++WLF+ ++++F SL AS+ +L    + K     + G A 
Sbjct: 74  SNGQVRGDSYSEGCLGQTGARIWLFIGFMLAFGSLIASMWILFGGYVAKEKDVVYPGIAV 133

Query: 116 VLQCVFVLISGLIYWTSHSE 135
             Q  F+   GL++    +E
Sbjct: 134 FFQNAFIFFGGLVFKFGRTE 153

Mus musculus (taxid: 10090)

>sp|O95807|TM50A_HUMAN Transmembrane protein 50A OS=Homo sapiens GN=TMEM50A PE=2 SV=1

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 5/126 (3%)

Query: 15  AGAVFGAGWWFWIDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEEG- 71
           AG +F  GWW  IDA V       F H  +  G+ A++A LM N V    +    Y EG 
Sbjct: 28  AGVLFFTGWWIIIDAAVIYPTMKDFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGC 87

Query: 72  --EWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLIY 129
             +   ++WLF+ ++++F SL AS+ +L    + K     + G A   Q  F+   GL++
Sbjct: 88  LGQTGARIWLFVGFMLAFGSLIASMWILFGGYVAKEKDIVYPGIAVFFQNAFIFFGGLVF 147

Query: 130 WTSHSE 135
               +E
Sbjct: 148 KFGRTE 153

Homo sapiens (taxid: 9606)

>sp|Q54T60|TMM50_DICDI Transmembrane protein 50 homolog OS=Dictyostelium discoideum GN=tmem50 PE=3 SV=1

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 65/123 (52%), Gaps = 15/123 (12%)

Query: 12  PGVAGAVFGAGWWFWIDAVVCSSVK----------VSFVHYLPGIFASLAALMFNCVRKE 61
           P +AG +F AGW+ WID  V  +            + +++YLPGIFA+L  +M N V   
Sbjct: 10  PALAGIIFTAGWFLWIDGHVYENTNNKNADFDGPHIQWIYYLPGIFATLGMVMANIVDLS 69

Query: 62  DIDYSP--YEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPS---AWTGTAGV 116
            ++ +   ++ G  ++++WLF+++ +SF  + A++ +++   L     +    W G A  
Sbjct: 70  ALNSNSLLFDGGATKVRVWLFISFAISFGCIGAALWIMVAVFLPPHNTNDAAQWPGIAIT 129

Query: 117 LQC 119
           LQ 
Sbjct: 130 LQT 132

Dictyostelium discoideum (taxid: 44689)

>sp|Q5R4C3|TM50B_PONAB Transmembrane protein 50B OS=Pongo abelii GN=TMEM50B PE=2 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 6/127 (4%)

Query: 14  VAGAVFGAGWWFWIDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEE- 70
           VAG +F  GWW  IDA V         H  +  G+F++LA  M N V    +    YE  
Sbjct: 29  VAGILFFTGWWIMIDAAVVYPKPEQLNHAFHTCGVFSTLAFFMINAVSNAQVRGDSYESG 88

Query: 71  --GEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLI 128
             G    ++WLF+ +++ F SL AS+ +L   + V      + G A   Q   +  S LI
Sbjct: 89  CLGRTGARVWLFIGFMLMFGSLIASMWILF-GAYVTQNTDVYPGLAVFFQNALIFFSTLI 147

Query: 129 YWTSHSE 135
           Y    +E
Sbjct: 148 YKFGRTE 154

Pongo abelii (taxid: 9601)

>sp|A9CAZ8|TM50B_PAPAN Transmembrane protein 50B OS=Papio anubis GN=TMEM50B PE=4 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 6/127 (4%)

Query: 14  VAGAVFGAGWWFWIDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEE- 70
           VAG +F  GWW  IDA V         H  +  G+F++LA  M N V    +    YE  
Sbjct: 29  VAGILFFTGWWIMIDAAVVYPKPEQLNHAFHTCGVFSTLAFFMINAVSNAQVRGDSYESG 88

Query: 71  --GEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLI 128
             G    ++WLF+ +++ F SL AS+ +L   + V      + G A   Q   +  S LI
Sbjct: 89  CLGRTGARVWLFIGFMLMFGSLIASMWILF-GAYVTQNTDVYPGLAVFFQNALIFFSTLI 147

Query: 129 YWTSHSE 135
           Y    +E
Sbjct: 148 YKFGRTE 154

Papio anubis (taxid: 9555)

>sp|P56557|TM50B_HUMAN Transmembrane protein 50B OS=Homo sapiens GN=TMEM50B PE=1 SV=2

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 6/127 (4%)

Query: 14  VAGAVFGAGWWFWIDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEE- 70
           VAG +F  GWW  IDA V         H  +  G+F++LA  M N V    +    YE  
Sbjct: 29  VAGILFFTGWWIMIDAAVVYPKPEQLNHAFHTCGVFSTLAFFMINAVSNAQVRGDSYESG 88

Query: 71  --GEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLI 128
             G    ++WLF+ +++ F SL AS+ +L   + V      + G A   Q   +  S LI
Sbjct: 89  CLGRTGARVWLFIGFMLMFGSLIASMWILF-GAYVTQNTDVYPGLAVFFQNALIFFSTLI 147

Query: 129 YWTSHSE 135
           Y    +E
Sbjct: 148 YKFGRTE 154

Homo sapiens (taxid: 9606)

>sp|Q3SZL9|TM50B_BOVIN Transmembrane protein 50B OS=Bos taurus GN=TMEM50B PE=2 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 6/127 (4%)

Query: 14  VAGAVFGAGWWFWIDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEE- 70
           VAG +F  GWW  IDA V         H  +  G+F++LA  M N V    +    YE  
Sbjct: 29  VAGILFFTGWWIMIDAAVVYPKPEQLNHAFHTCGVFSTLAFFMINAVSNAQVRGDSYESG 88

Query: 71  --GEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLI 128
             G    ++WLF+ +++ F SL AS+ +L   + V      + G A   Q   +  S LI
Sbjct: 89  CLGRTGARVWLFIGFMLMFGSLIASMWILF-GAYVTQNTDVYPGLAVFFQNALIFFSTLI 147

Query: 129 YWTSHSE 135
           Y    +E
Sbjct: 148 YKFGRTE 154

Bos taurus (taxid: 9913)

>sp|Q9D1X9|TM50B_MOUSE Transmembrane protein 50B OS=Mus musculus GN=Tmem50b PE=2 SV=1

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 6/127 (4%)

Query: 14  VAGAVFGAGWWFWIDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEE- 70
           VAG +F  GWW  IDA V         H  +  G+F++LA  M N V    +    YE  
Sbjct: 29  VAGILFFTGWWIMIDAAVVYPKPEQLNHAFHTCGVFSTLAFFMINAVSNAQVRGDSYESG 88

Query: 71  --GEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLI 128
             G    ++WLF+ +++ F SL AS+ +L   + V      + G A   Q   +  S LI
Sbjct: 89  CLGRTGARVWLFIGFMLMFGSLIASMWILF-GAYVTQNIDVYPGLAVFFQNALIFFSTLI 147

Query: 129 YWTSHSE 135
           Y    +E
Sbjct: 148 YKFGRTE 154

Mus musculus (taxid: 10090)

>sp|Q12016|VPS68_YEAST Vacuolar protein sorting-associated protein 68 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS68 PE=1 SV=1

 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 24/145 (16%)

Query: 14  VAGAVFGAGWWFWIDAVV------CSSVKVSFVHYLPGIFASLAALMFNCVRKEDI---- 63
           ++GA++  G+W ++DAV+       S V V+F+ ++P + ++L  L+ N + K  +    
Sbjct: 29  LSGALYALGFWIFLDAVLYSRYSNASDVHVTFIDWIPFLCSTLGTLIVNSIEKNRLLQGA 88

Query: 64  ---DYSPYEEG--------EWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVK---TGPSA 109
              D   +  G         W+ +  LF  + +    L+ S+ +LI   LVK   T P+ 
Sbjct: 89  LSSDGGAFGSGVGDLDSSMAWQARTVLFFGFALLAGGLSGSIVVLIIKFLVKDYNTYPTL 148

Query: 110 WTGTAGVLQCVFVLISGLIYWTSHS 134
             G   VL  V +L+S ++ W + +
Sbjct: 149 GMGVNNVLGNVCILLSCVVLWIAQN 173

Involved in vacuolar protein sorting.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	135
284521000	135	transmembrane protein 50a, putative [Jat	1.0	1.0	0.962	3e-68
225459447	135	PREDICTED: transmembrane protein 50 homo	1.0	1.0	0.933	2e-66
224066885	135	predicted protein [Populus trichocarpa]	1.0	1.0	0.933	4e-66
449445118	135	PREDICTED: transmembrane protein 50 homo	1.0	1.0	0.925	5e-66
18400231	135	uncharacterized protein [Arabidopsis tha	1.0	1.0	0.881	4e-64
357461687	135	Salt tolerant protein [Medicago truncatu	1.0	1.0	0.866	4e-61
356509462	135	PREDICTED: transmembrane protein 50 homo	1.0	1.0	0.859	5e-61
255545552	143	Transmembrane protein 50A, putative [Ric	0.925	0.874	0.936	6e-61
351721754	135	uncharacterized protein LOC100306592 [Gl	1.0	1.0	0.859	1e-60
224082214	135	predicted protein [Populus trichocarpa]	1.0	1.0	0.881	5e-60

>gi|284521000|gb|ADB93075.1| transmembrane protein 50a, putative [Jatropha curcas]

 Score =  262 bits (669), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 130/135 (96%), Positives = 131/135 (97%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
           MDLAELWAIFGPGVAGAVFG GWWFWIDAVVCSSVKVSFVHYLPGIFAS AALMFNCVRK
Sbjct: 1   MDLAELWAIFGPGVAGAVFGTGWWFWIDAVVCSSVKVSFVHYLPGIFASFAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLF AYVVSFVSLAASVGLLIQDS+VKTGPS WTGTAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSIVKTGPSVWTGTAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 135
           FVLISGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459447|ref|XP_002285830.1| PREDICTED: transmembrane protein 50 homolog [Vitis vinifera] gi|302141881|emb|CBI19084.3| unnamed protein product [Vitis vinifera]

 Score =  256 bits (655), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 126/135 (93%), Positives = 131/135 (97%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
           MDLAELWAIFGPG+AGA+FGAGWWFW+DAVVCSSVKVSFVHYLPGIFASLAA+MFN VRK
Sbjct: 1   MDLAELWAIFGPGIAGAIFGAGWWFWVDAVVCSSVKVSFVHYLPGIFASLAAVMFNSVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLF AYVVSFVSLAASVGLLIQDSL K+GPS WTGTAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSLEKSGPSVWTGTAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 135
           FVLISGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066885|ref|XP_002302262.1| predicted protein [Populus trichocarpa] gi|222843988|gb|EEE81535.1| predicted protein [Populus trichocarpa]

 Score =  255 bits (651), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 126/135 (93%), Positives = 128/135 (94%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
           MDL ELWAI GP VAGAVFG GWWFWIDAVVCSSV VSFVHYLPGIFAS+AALMFNCVRK
Sbjct: 1   MDLPELWAILGPAVAGAVFGTGWWFWIDAVVCSSVTVSFVHYLPGIFASIAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLF AYVVSFVSLAASVGLLIQDS+VKTGPS WTGTAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSIVKTGPSVWTGTAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 135
           FVLISGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445118|ref|XP_004140320.1| PREDICTED: transmembrane protein 50 homolog [Cucumis sativus] gi|449525329|ref|XP_004169670.1| PREDICTED: transmembrane protein 50 homolog [Cucumis sativus]

 Score =  254 bits (650), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 125/135 (92%), Positives = 129/135 (95%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
           MDLAELW+IFGPGVAGAVFGAGWWFW+DAVVCSSV VSFVHYLPGIFAS AALMFNCVRK
Sbjct: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLF AYVVSFVSLAASVGLLIQDS+VK GPS WTG AGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 135
           FVL+SGLIYWTSHSE
Sbjct: 121 FVLVSGLIYWTSHSE 135

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18400231|ref|NP_564477.1| uncharacterized protein [Arabidopsis thaliana] gi|297846688|ref|XP_002891225.1| hypothetical protein ARALYDRAFT_314063 [Arabidopsis lyrata subsp. lyrata] gi|15292703|gb|AAK92720.1| unknown protein [Arabidopsis thaliana] gi|19310689|gb|AAL85075.1| unknown protein [Arabidopsis thaliana] gi|297337067|gb|EFH67484.1| hypothetical protein ARALYDRAFT_314063 [Arabidopsis lyrata subsp. lyrata] gi|332193763|gb|AEE31884.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  248 bits (634), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 119/135 (88%), Positives = 128/135 (94%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
           MDLAELWAIFGPG +GAVFG GWWFW+DAVVCSS++V FVHYLPGIFASL ALMFNCVRK
Sbjct: 1   MDLAELWAIFGPGFSGAVFGTGWWFWVDAVVCSSIQVPFVHYLPGIFASLGALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
           EDIDYSPY+EGEWRLKLWLF+AYVV+FVSLAASVGLLIQDS+VKTGPS WTG AGV QCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFIAYVVAFVSLAASVGLLIQDSVVKTGPSTWTGVAGVFQCV 120

Query: 121 FVLISGLIYWTSHSE 135
           FVLISGL+YWTSHSE
Sbjct: 121 FVLISGLMYWTSHSE 135

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357461687|ref|XP_003601125.1| Salt tolerant protein [Medicago truncatula] gi|217071084|gb|ACJ83902.1| unknown [Medicago truncatula] gi|355490173|gb|AES71376.1| Salt tolerant protein [Medicago truncatula] gi|388498854|gb|AFK37493.1| unknown [Medicago truncatula]

 Score =  238 bits (608), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 117/135 (86%), Positives = 122/135 (90%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
           MDL ELWAIFGPGVAGAVFGAGWW W+DAVVCSS  V F+HYLPGIFASLA LMFNCVRK
Sbjct: 1   MDLIELWAIFGPGVAGAVFGAGWWIWLDAVVCSSTTVPFLHYLPGIFASLAGLMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
           EDIDYSPY+EGEWRLKLWLF+AYVVSFVSLA S GLLIQDSL K+ PS WTG AGVLQCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFIAYVVSFVSLAGSAGLLIQDSLDKSSPSVWTGIAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 135
           FVLISGLIYWTSH E
Sbjct: 121 FVLISGLIYWTSHPE 135

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509462|ref|XP_003523468.1| PREDICTED: transmembrane protein 50 homolog [Glycine max]

 Score =  238 bits (608), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 116/135 (85%), Positives = 123/135 (91%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
           MDL ELWAIFGPGVAGAVFGAGWW W+DAVVCS+V V F+HYLPGIFASLAALMFNCVRK
Sbjct: 1   MDLLELWAIFGPGVAGAVFGAGWWIWLDAVVCSTVTVPFLHYLPGIFASLAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
           EDIDYSPY+EGEWRLKLWLF+AYVVSFVSLA S GLLIQDSL K+ PS WTG AGVLQCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFIAYVVSFVSLAGSAGLLIQDSLDKSAPSVWTGVAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 135
           FVLI GL+YWTSH E
Sbjct: 121 FVLICGLVYWTSHPE 135

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545552|ref|XP_002513836.1| Transmembrane protein 50A, putative [Ricinus communis] gi|223546922|gb|EEF48419.1| Transmembrane protein 50A, putative [Ricinus communis]

 Score =  238 bits (607), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 117/125 (93%), Positives = 121/125 (96%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
           MDL ELWAIFGPGVAGAVFGAGWWFW+DAVVCS+VKVSFVHYLPGIFAS+AALMFNCVRK
Sbjct: 1   MDLPELWAIFGPGVAGAVFGAGWWFWVDAVVCSAVKVSFVHYLPGIFASIAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLF AYVVSFVSLAASVGLLIQDSLVK+GPS WTGTAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSLVKSGPSVWTGTAGVLQCV 120

Query: 121 FVLIS 125
           FVLI 
Sbjct: 121 FVLIR 125

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721754|ref|NP_001237220.1| uncharacterized protein LOC100306592 [Glycine max] gi|255629001|gb|ACU14845.1| unknown [Glycine max]

 Score =  237 bits (604), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 116/135 (85%), Positives = 122/135 (90%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
           MDL ELWAIFGPGVAGAVFGAGWW W+DAVVCS V V F+HYLPGIFAS AALMFNCVRK
Sbjct: 1   MDLLELWAIFGPGVAGAVFGAGWWIWLDAVVCSLVTVPFLHYLPGIFASFAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
           EDIDYSPY+EGEWRLKLWLF+AYVVSFVSLA S GLLIQDSL K+ PS WTG AGVLQCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFIAYVVSFVSLAGSAGLLIQDSLDKSAPSVWTGVAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 135
           FVLISGL+YWTSH E
Sbjct: 121 FVLISGLVYWTSHPE 135

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082214|ref|XP_002306605.1| predicted protein [Populus trichocarpa] gi|222856054|gb|EEE93601.1| predicted protein [Populus trichocarpa]

 Score =  235 bits (599), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 119/135 (88%), Positives = 123/135 (91%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
           MDL ELWAIFGPGVAGAVFGAGWWFWIDAVVC SV VS      GIFAS+A+LMFNCVRK
Sbjct: 1   MDLPELWAIFGPGVAGAVFGAGWWFWIDAVVCGSVTVSVGFATAGIFASIASLMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLF AYVVSFVSLAASVGLLIQDS+VKTGPS WTGTAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSIVKTGPSVWTGTAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 135
           FVLISGLI WTS+SE
Sbjct: 121 FVLISGLICWTSYSE 135

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	135
TAIR|locus:2203089	135	AT1G36980 "AT1G36980" [Arabido	1.0	1.0	0.777	2.4e-53
FB|FBgn0035528	152	CG15012 [Drosophila melanogast	0.807	0.717	0.297	2.5e-10
DICTYBASE|DDB_G0281983	156	tmem50 "TMEM50 family protein"	0.681	0.589	0.288	1.2e-08
UNIPROTKB|E1BSH6	157	TMEM50A "Uncharacterized prote	0.807	0.694	0.298	1.6e-08
UNIPROTKB|E2RAM1	157	TMEM50A "Uncharacterized prote	0.807	0.694	0.289	2.6e-08
UNIPROTKB|O95807	157	TMEM50A "Transmembrane protein	0.807	0.694	0.289	3.3e-08
UNIPROTKB|I3LRC6	122	TMEM50A "Uncharacterized prote	0.792	0.877	0.294	3.3e-08
RGD|1305638	157	Tmem50a "transmembrane protein	0.807	0.694	0.289	5.3e-08
MGI|MGI:1919067	157	Tmem50a "transmembrane protein	0.807	0.694	0.289	6.8e-08
UNIPROTKB|Q17QR3	157	TMEM50A "Uncharacterized prote	0.807	0.694	0.289	8.7e-08

TAIR|locus:2203089 AT1G36980 "AT1G36980" [Arabidopsis thaliana (taxid:3702)]

 Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
 Identities = 105/135 (77%), Positives = 113/135 (83%)

Query:     1 MDLAELWAIXXXXXXXXXXXXXXXXXIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
             MDLAELWAI                 +DAVVCSS++V FVHYLPGIFASL ALMFNCVRK
Sbjct:     1 MDLAELWAIFGPGFSGAVFGTGWWFWVDAVVCSSIQVPFVHYLPGIFASLGALMFNCVRK 60

Query:    61 EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
             EDIDYSPY+EGEWRLKLWLF+AYVV+FVSLAASVGLLIQDS+VKTGPS WTG AGV QCV
Sbjct:    61 EDIDYSPYDEGEWRLKLWLFIAYVVAFVSLAASVGLLIQDSVVKTGPSTWTGVAGVFQCV 120

Query:   121 FVLISGLIYWTSHSE 135
             FVLISGL+YWTSHSE
Sbjct:   121 FVLISGLMYWTSHSE 135

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

FB|FBgn0035528 CG15012 [Drosophila melanogaster (taxid:7227)]

 Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
 Identities = 33/111 (29%), Positives = 60/111 (54%)

Query:    27 IDAV-VCSSVKVSFVHYLPGIFASLAALMFNCVRKEDI-DYSPYEEGEWRLKLWLFLAYV 84
             IDA+ +    +++  H   GIF +++  M N V+ E I D +  E G    K+WL + ++
Sbjct:    37 IDAMSIDGKHQITTGHVFIGIFGTISFCMVNAVKGEHISDENSSESGARIAKIWLLVGFL 96

Query:    85 VSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLIYWTSHSE 135
             + F S+ A++ ++I D +       W G A ++Q VF+L + L+Y    +E
Sbjct:    97 MGFASIIAAIWVMIDDFINNEKKDGWFGVALLMQNVFILFASLVYKFGRNE 147

GO:0004563 "beta-N-acetylhexosaminidase activity" evidence=ISS

DICTYBASE|DDB_G0281983 tmem50 "TMEM50 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 28/97 (28%), Positives = 57/97 (58%)

Query:    37 VSFVHYLPGIFASLAALMFNCVRKEDIDYSP--YEEGEWRLKLWLFLAYVVSFVSLAASV 94
             + +++YLPGIFA+L  +M N V    ++ +   ++ G  ++++WLF+++ +SF  + A++
Sbjct:    45 IQWIYYLPGIFATLGMVMANIVDLSALNSNSLLFDGGATKVRVWLFISFAISFGCIGAAL 104

Query:    95 GLLIQDSLV--KTGPSA-WTGTAGVLQCVFVLISGLI 128
              +++   L    T  +A W G A  LQ   + +S L+
Sbjct:   105 WIMVAVFLPPHNTNDAAQWPGIAITLQTSLIFLSSLL 141

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|E1BSH6 TMEM50A "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 34/114 (29%), Positives = 55/114 (48%)

Query:    27 IDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEEG---EWRLKLWLFL 81
             IDA V       F H  +  G+ A++A LM N V    +    Y EG   +   ++WLF+
Sbjct:    40 IDAAVKYPTMEDFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFI 99

Query:    82 AYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLIYWTSHSE 135
              ++++F SL AS+ +L    +VK     + G A   Q  F+   GL++    +E
Sbjct:   100 GFMMAFGSLIASMWILFGGYVVKEKAVVYPGIAVFFQNAFIFFGGLVFKFGRTE 153

GO:0005783 "endoplasmic reticulum" evidence=IEA

UNIPROTKB|E2RAM1 TMEM50A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 33/114 (28%), Positives = 54/114 (47%)

Query:    27 IDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEEG---EWRLKLWLFL 81
             IDA V       F H  +  G+ A++A LM N V    +    Y EG   +   ++WLF+
Sbjct:    40 IDAAVIYPTMEEFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFI 99

Query:    82 AYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLIYWTSHSE 135
              ++++F SL AS+ +L    + K     + G A   Q  F+   GL++    +E
Sbjct:   100 GFMLAFGSLIASMWILFGGYVAKEKAIVYPGIAVFFQNAFIFFGGLVFKFGRTE 153

GO:0005783 "endoplasmic reticulum" evidence=IEA

UNIPROTKB|O95807 TMEM50A "Transmembrane protein 50A" [Homo sapiens (taxid:9606)]

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 33/114 (28%), Positives = 54/114 (47%)

Query:    27 IDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEEG---EWRLKLWLFL 81
             IDA V       F H  +  G+ A++A LM N V    +    Y EG   +   ++WLF+
Sbjct:    40 IDAAVIYPTMKDFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFV 99

Query:    82 AYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLIYWTSHSE 135
              ++++F SL AS+ +L    + K     + G A   Q  F+   GL++    +E
Sbjct:   100 GFMLAFGSLIASMWILFGGYVAKEKDIVYPGIAVFFQNAFIFFGGLVFKFGRTE 153

GO:0016021 "integral to membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

UNIPROTKB|I3LRC6 TMEM50A "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 33/112 (29%), Positives = 55/112 (49%)

Query:    27 IDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYEEG---EWRLKLWLFLAY 83
             IDA V      S+ H   G+ A++A LM N V    +    Y EG   +   ++WLF+ +
Sbjct:     9 IDAAVIYXFNHSY-HAC-GVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFIGF 66

Query:    84 VVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLIYWTSHSE 135
             +++F SL AS+ +L    + K   + + G A   Q  F+   GL++    +E
Sbjct:    67 MLAFGSLIASMWILFGGYVAKEKTTVYPGIAVFFQNAFIFFGGLVFKFGRTE 118

GO:0005783 "endoplasmic reticulum" evidence=IEA

RGD|1305638 Tmem50a "transmembrane protein 50A" [Rattus norvegicus (taxid:10116)]

 Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 33/114 (28%), Positives = 54/114 (47%)

Query:    27 IDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEEG---EWRLKLWLFL 81
             IDA V       F H  +  G+ A++A LM N V    +    Y EG   +   ++WLF+
Sbjct:    40 IDAAVMYPNMEQFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFI 99

Query:    82 AYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLIYWTSHSE 135
              ++++F SL AS+ +L    + K     + G A   Q  F+   GL++    +E
Sbjct:   100 GFMLAFGSLIASMWILFGGYVAKEKAIVYPGIAVFFQNAFIFFGGLVFKFGRTE 153

GO:0005737 "cytoplasm" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO

MGI|MGI:1919067 Tmem50a "transmembrane protein 50A" [Mus musculus (taxid:10090)]

 Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
 Identities = 33/114 (28%), Positives = 54/114 (47%)

Query:    27 IDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEEG---EWRLKLWLFL 81
             IDA V       F H  +  G+ A++A LM N V    +    Y EG   +   ++WLF+
Sbjct:    40 IDAAVMYPRMDQFNHSYHTCGVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFI 99

Query:    82 AYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLIYWTSHSE 135
              ++++F SL AS+ +L    + K     + G A   Q  F+   GL++    +E
Sbjct:   100 GFMLAFGSLIASMWILFGGYVAKEKDVVYPGIAVFFQNAFIFFGGLVFKFGRTE 153

GO:0005737 "cytoplasm" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q17QR3 TMEM50A "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 33/114 (28%), Positives = 54/114 (47%)

Query:    27 IDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEEG---EWRLKLWLFL 81
             IDA V       F H  +  G+ A++A LM N V    +    Y EG   +   ++WLF+
Sbjct:    40 IDAAVIYPRMDEFNHSYHACGVIATVAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFI 99

Query:    82 AYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLISGLIYWTSHSE 135
              ++++F SL AS+ +L    + K     + G A   Q  F+   GL++    +E
Sbjct:   100 GFMLAFGSLIASMWILFGGYVAKEKAIVYPGIAVFFQNAFIFFGGLVFKFGRTE 153

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	135
pfam05255	165	pfam05255, UPF0220, Uncharacterized protein family	6e-25

>gnl|CDD|218522 pfam05255, UPF0220, Uncharacterized protein family (UPF0220)

 Score = 92.8 bits (231), Expect = 6e-25
 Identities = 51/136 (37%), Positives = 72/136 (52%), Gaps = 12/136 (8%)

Query: 9   IFGPGVAGAVFGAGWWFWIDAVV------CSSVKVSFVHYLPGIFASLAALMFNCVRKE- 61
             G  +AGA+F  GWW  IDA V       S V ++FV ++PGI ++L  LM N + K  
Sbjct: 22  SVGVYLAGALFALGWWILIDAAVYSKKNNASDVHITFVDWIPGICSTLGMLMVNSIEKSR 81

Query: 62  ---DIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVK--TGPSAWTGTAGV 116
              D   S    G W  ++WLFL + + F  L AS+ +LI   +VK    P+ W G A V
Sbjct: 82  LRGDSLSSGGSSGAWGARVWLFLGFALLFGGLIASIWVLILKYVVKDYEKPTLWPGVANV 141

Query: 117 LQCVFVLISGLIYWTS 132
           LQ V +++S L+ W  
Sbjct: 142 LQNVLIMLSSLVLWFG 157

This family of proteins is functionally uncharacterized. Length = 165

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	135
PF05255	166	UPF0220: Uncharacterised protein family (UPF0220);	100.0
KOG3393	157	consensus Predicted membrane protein [Function unk	100.0

>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised

Probab=100.00  E-value=3.1e-54  Score=333.99  Aligned_cols=135  Identities=42%  Similarity=0.830  Sum_probs=126.7

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc------cccccchhhHHHHHHHHHHHhcccCCccccCCCC----C
Q 032718            1 MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSV------KVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYE----E   70 (135)
Q Consensus         1 ~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~~~~------~~~f~~~ipgI~stlgm~miN~V~~~~l~~~~~~----~   70 (135)
                      .|+++.||++++|+||+||++|||++|||++++++      |++|+||+||||||+||+|+|+|||+||++|+++    .
T Consensus        15 ~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~V~~~~l~~~~~~~~~~~   94 (166)
T PF05255_consen   15 FDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNSVSKSRLRGDSYSESGCG   94 (166)
T ss_pred             CCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhccccHHHhcCCCCCCCCCc
Confidence            37899999999999999999999999999999765      8999999999999999999999999999977664    2


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhhhccccc--CCCceeehHHHHHHHHHHHHHhHHhhhcc-CC
Q 032718           71 GEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVK--TGPSAWTGTAGVLQCVFVLISGLIYWTSH-SE  135 (135)
Q Consensus        71 ~~~~AR~~LFigf~l~fggl~~s~~ili~~yv~~--~~~~~~~Gva~vlqN~lI~~sslil~~~r-~e  135 (135)
                      +.||||+|||+||+++|||++||+|||++||++|  ++|+.|||||+++||++||+||++||++| +|
T Consensus        95 ~~~~aR~~LFigf~l~fggl~~s~~vli~~yv~~~~~~~~~~~Gva~vlqN~lI~~Sslvl~~~r~~e  162 (166)
T PF05255_consen   95 GAWRARLWLFIGFALSFGGLAGSVWVLILKYVVPQYTKPTLWPGVANVLQNALIFLSSLVLWFGRNTE  162 (166)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcccccHHHHHHHHHHHHHHHHHhccccc
Confidence            5699999999999999999999999999999999  57899999999999999999999999999 55

>KOG3393 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=9.1e-53  Score=320.14  Aligned_cols=132  Identities=36%  Similarity=0.672  Sum_probs=124.6

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC--ccccccchhhHHHHHHHHHHHhcccCCccccCCCCC---chhHHH
Q 032718            2 DLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSS--VKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYEE---GEWRLK   76 (135)
Q Consensus         2 ~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~~~--~~~~f~~~ipgI~stlgm~miN~V~~~~l~~~~~~~---~~~~AR   76 (135)
                      |++++||.+.  +||+||++|||++|||+++++  +|+||+||+|++|||++++|||+|||+|+++|+|++   ++++||
T Consensus        15 ~~~~rrn~v~--~aG~LFf~GwWi~iDAa~~~~~~~~~t~~~~i~~v~stl~~~mVNaI~~~~vsgds~a~g~sga~~AR   92 (157)
T KOG3393|consen   15 DWGERRNAVA--VAGALFFTGWWIMIDAALISPKSEQITFVYWIIGVFSTLAFLMVNAISNSQVSGDSYAEGCSGARGAR   92 (157)
T ss_pred             cccccccchH--HHHHHHHHHHHHhhhhhhccCcccceeeeeehhHHHHHHHHHhheccccceecCCcccccccccchhh
Confidence            7889998776  999999999999999999975  599999999999999999999999999999999865   569999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhcccccCCCc-eeehHHHHHHHHHHHHHhHHhhhccCC
Q 032718           77 LWLFLAYVVSFVSLAASVGLLIQDSLVKTGPS-AWTGTAGVLQCVFVLISGLIYWTSHSE  135 (135)
Q Consensus        77 ~~LFigf~l~fggl~~s~~ili~~yv~~~~~~-~~~Gva~vlqN~lI~~sslil~~~r~e  135 (135)
                      +|||+||+|+||||+||+||||.||++++++. +|||+|+++||++||+|+++|||+|+|
T Consensus        93 ~wLfiGF~l~fgsLias~wVli~~yv~~~~~~~v~~GvA~~~~N~~i~~s~~v~kfgr~e  152 (157)
T KOG3393|consen   93 IWLFIGFALLFGSLIASIWVLIGKYVVKEYDGKVWPGVANFLQNVLIFFSSLVYKFGRTE  152 (157)
T ss_pred             hHHHHHHHHHHhhhhhhHHHHhHHHHhcCCCCcccccHHHHHHHHHHHHHHHHHhhcCch
Confidence            99999999999999999999999999998665 799999999999999999999999998

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00