Citrus Sinensis ID: 032748

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130----
Protein Sequence
MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYGFAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVEGVAVRFNFVGKIMEFSQE
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccccEEHcHHHHHHHHHcc
Coil and Loop (DISEMBL)
MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYGfayggpfghFLHKLMDIIFKGKKDKKTVAKKVLLEQltsspwnnfLFMMYYGLVVEGVAVRFNFVGKIMEFSQE
Flexible Loop (DISEMBL)
MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYGFAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLeqltsspwnnFLFMMYYGLVVEGVAVRFNFVGKIMEFSQE
Low Complexity Region (SEG)
MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKlqltrllllMFYGFAYGGPFGHFLHKLMDIIFkgkkdkktvakkVLLEQLTSSPWNNFLFMMYYGLVVEGVAVRFNFVGKIMEFSQE
Disordered region (IsUnstruct)
******EAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYGFAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVEGVAVRFNFVGKIME****
Disordered Region (DISOPRED)
****AKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYGFAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVEGVAVRFNFVGKIMEFS**
Disordered Region (DISEMBL)
MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYGFAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVEGVAVRFNFVGKIMEFSQE
Disordered Region (DISPRO)
*SDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYGFAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVEGVAVRFNFVGKIMEFSQ*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYGFAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVEGVAVRFNFVGKIMEFSQE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	134	2.2.26 [Sep-21-2011]
Q9ZS51	190	Peroxisomal membrane prot	no	no	0.858	0.605	0.582	1e-33
Q54FR4	185	PXMP2/4 family protein 4	yes	no	0.820	0.594	0.362	6e-09
Q54XX9	193	PXMP2/4 family protein 2	no	no	0.708	0.492	0.320	2e-08
Q66GV0	177	Protein Mpv17 OS=Xenopus	N/A	no	0.686	0.519	0.343	6e-08
Q54GD8	184	PXMP2/4 family protein 3	no	no	0.708	0.516	0.312	1e-07
Q07066	194	Peroxisomal membrane prot	yes	no	0.850	0.587	0.292	4e-07
Q2KIY1	196	Peroxisomal membrane prot	yes	no	0.746	0.510	0.305	7e-07
P19258	176	Protein Mpv17 OS=Mus musc	yes	no	0.686	0.522	0.322	1e-05
Q5TZ51	177	Protein Mpv17 OS=Danio re	yes	no	0.686	0.519	0.312	1e-05
Q5BK62	176	Protein Mpv17 OS=Rattus n	no	no	0.850	0.647	0.294	1e-05

>sp|Q9ZS51|PMP22_ARATH Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana GN=PMP22 PE=1 SV=1

 Score =  141 bits (356), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 67/115 (58%), Positives = 88/115 (76%)

Query: 2   SDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYGF 61
           S   K   ++YL QLQ HPLRTKAITAG+L+G SD ++QK+SG++K+QL R+LL + +  
Sbjct: 4   SPPKKTTLQRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAG 63

Query: 62  AYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVE 116
            + GP GHF H  +D  FKGKKD +TVAKKV+LEQLT SP N+ LFM+YYG+V+E
Sbjct: 64  GFLGPAGHFFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIE 118

May be involved in the metabolism of reactive oxygen species.
Arabidopsis thaliana (taxid: 3702)

>sp|Q54FR4|PX24D_DICDI PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1

 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 6/116 (5%)

Query: 6   KEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKI----SGVKKLQLTRLLLLMFYGF 61
           K A   YL QL  +P+ TKA+T+G L   SD++ Q I       KK    R + +  +GF
Sbjct: 9   KLAQSHYLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFGF 68

Query: 62  AYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVEG 117
           A  GP  H+  K +D  F  KK  +    K+ ++Q+  SP  NFLF    G ++EG
Sbjct: 69  AVTGPLFHYWFKYLDKHFP-KKSYRHAFIKLTIDQVVCSPVFNFLFFSGMG-ILEG 122

Dictyostelium discoideum (taxid: 44689)

>sp|Q54XX9|PX24B_DICDI PXMP2/4 family protein 2 OS=Dictyostelium discoideum GN=DDB_G0278529 PE=3 SV=1

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 8/103 (7%)

Query: 6   KEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKIS-------GVKKLQLTRLLLLMF 58
           ++ W  YL  L  HPL TK+++ G L G  D +AQ++           KL   R+  +  
Sbjct: 2   RKLWGLYLGLLDNHPLVTKSLSTGFLMGTGDILAQRLEHKFKDEKSQFKLDYKRVATMST 61

Query: 59  YGFAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSP 101
            G  Y GP  H+ ++ +DI+ KG + +  + KK+L++QL  +P
Sbjct: 62  VGIFYSGPMLHYWYRSLDIMVKG-EGRSVIIKKMLIDQLLFAP 103

Dictyostelium discoideum (taxid: 44689)

>sp|Q66GV0|MPV17_XENLA Protein Mpv17 OS=Xenopus laevis GN=mpv17 PE=2 SV=2

 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 4/96 (4%)

Query: 9   WRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKI---SGVKKLQLTRLLLLMFYGFAYGG 65
           WR Y   L  HP + + +TAG L G  D I+Q++    G+K   + R + +M  GF + G
Sbjct: 5   WRAYQRLLGAHPWKVQIVTAGSLVGVGDVISQQLLERKGLKGHSIERTVKMMGIGFCFVG 64

Query: 66  PFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSP 101
           P     +K++D I  G   K    KK+LL+Q+  +P
Sbjct: 65  PVVGGWYKILDRIIPG-SGKPVALKKMLLDQVAFAP 99

Involved in mitochondria homeostasis.

Xenopus laevis (taxid: 8355)

>sp|Q54GD8|PX24C_DICDI PXMP2/4 family protein 3 OS=Dictyostelium discoideum GN=DDB_G0290223 PE=3 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 1/96 (1%)

Query: 12  YLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYGFAYGGPFGHFL 71
           Y+ +L+  P++TKA+T+  L+  S  +AQK    KK+    ++    +G     P  H+ 
Sbjct: 17  YMKKLKSKPIQTKALTSATLSFISSVVAQKFIEKKKINWNAVVKFTVWGLI-SSPLVHYW 75

Query: 72  HKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLF 107
           H ++D +FK  KDK     K++++QL  +P+ N  F
Sbjct: 76  HIILDRLFKNIKDKYQSWGKLIVDQLVFAPFINIAF 111

Dictyostelium discoideum (taxid: 44689)

>sp|Q07066|PXMP2_RAT Peroxisomal membrane protein 2 OS=Rattus norvegicus GN=Pxmp2 PE=1 SV=2

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 69/123 (56%), Gaps = 9/123 (7%)

Query: 1   MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKK-----LQLTRLLL 55
           +  + K A  +YL+ L+ +P+ TKA+++GIL+   + +AQ I   +K     L+++ LL 
Sbjct: 14  LRSLPKRALAQYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLR 73

Query: 56  LMFYGFAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGL-V 114
            + YG    GP  H+L+  M+     +     V K++LL++L  +P   FL + ++ + +
Sbjct: 74  YLVYGLFVTGPLSHYLYLFMEYWVPPEVPWARV-KRLLLDRLFFAP--TFLLLFFFVMNL 130

Query: 115 VEG 117
           +EG
Sbjct: 131 LEG 133

Seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the peroxisomal membrane.

Rattus norvegicus (taxid: 10116)

>sp|Q2KIY1|PXMP2_BOVIN Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3

 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 8/108 (7%)

Query: 1   MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKI-------SGVKKLQLTRL 53
           +  + + A  +YL  L+++P+ TKA T+GIL+   + +AQ I       +  +KL ++  
Sbjct: 14  LGPLPRRALSQYLRLLRLYPVLTKAATSGILSALGNFLAQLIEKKQKKENCSQKLDVSGP 73

Query: 54  LLLMFYGFAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSP 101
           L    YGF + GP GHF + LM+     +     + K++LL++L  +P
Sbjct: 74  LRYAIYGFFFTGPLGHFFYLLMERWIPSEVPLAGI-KRLLLDRLLFAP 120

Seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the peroxisomal membrane.

Bos taurus (taxid: 9913)

>sp|P19258|MPV17_MOUSE Protein Mpv17 OS=Mus musculus GN=Mpv17 PE=2 SV=1

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 4/96 (4%)

Query: 9   WRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKI---SGVKKLQLTRLLLLMFYGFAYGG 65
           WR Y   L  HP + + +TAG L G  D I+Q++    G+++ Q  R L ++  G  + G
Sbjct: 4   WRAYQRALAAHPWKVQVLTAGSLMGVGDMISQQLVERRGLQQHQAGRTLTMVSLGCGFVG 63

Query: 66  PFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSP 101
           P     +K++D +  G   K    KK+LL+Q   +P
Sbjct: 64  PVVGGWYKVLDHLIPGTT-KVHALKKMLLDQGGFAP 98

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Mus musculus (taxid: 10090)

>sp|Q5TZ51|MPV17_DANRE Protein Mpv17 OS=Danio rerio GN=mpv17 PE=2 SV=1

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 9   WRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKI---SGVKKLQLTRLLLLMFYGFAYGG 65
           WR Y   +  HP + + ITAG L G  D I+Q++    G+      R   +M  GF + G
Sbjct: 5   WRSYQALMAKHPWKVQIITAGSLVGVGDVISQQLIERRGLANHNARRTAKMMSIGFFFVG 64

Query: 66  PFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSP 101
           P     +K++D +  G   K    KK+L++Q+  +P
Sbjct: 65  PVVGGWYKVLDKLVTGGT-KSAALKKMLVDQVGFAP 99

Involved in mitochondria homeostasis.

Danio rerio (taxid: 7955)

>sp|Q5BK62|MPV17_RAT Protein Mpv17 OS=Rattus norvegicus GN=Mpv17 PE=2 SV=1

 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 5/119 (4%)

Query: 9   WRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKI---SGVKKLQLTRLLLLMFYGFAYGG 65
           WR Y   L  HP + + +TAG L G  D I+Q++    G+++ Q  R L +   G  + G
Sbjct: 4   WRAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQQHQTGRTLTMASLGCGFVG 63

Query: 66  PFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVEGVAVRFNF 124
           P     ++++D +  G   K    KK+LL+Q   +P     F+   G V+ G++ + N+
Sbjct: 64  PVVGGWYRVLDHLIPGTT-KVNALKKMLLDQGGFAPCFLGCFLPLVG-VLNGMSAQDNW 120

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	134
79325105	185	Peroxisomal membrane 22 kDa (Mpv17/PMP22	0.873	0.632	0.871	4e-54
297800820	185	predicted protein [Arabidopsis lyrata su	0.873	0.632	0.863	9e-54
225433201	185	PREDICTED: peroxisomal membrane protein	0.873	0.632	0.811	7e-52
147795757	185	hypothetical protein VITISV_012682 [Viti	0.873	0.632	0.811	7e-52
255575843	176	peroxisomal membrane protein 2, pxmp2, p	0.873	0.664	0.871	3e-49
449458842	183	PREDICTED: peroxisomal membrane protein	0.873	0.639	0.786	9e-48
449520295	183	PREDICTED: LOW QUALITY PROTEIN: peroxiso	0.873	0.639	0.786	1e-47
115477897	187	Os08g0566900 [Oryza sativa Japonica Grou	0.873	0.625	0.769	2e-46
195611428	187	peroxisomal membrane protein PMP22 [Zea	0.873	0.625	0.752	1e-45
413921703	181	hypothetical protein ZEAMMB73_715532 [Ze	0.873	0.646	0.752	1e-45

>gi|79325105|ref|NP_001031637.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana] gi|62321523|dbj|BAD95003.1| hypothetical protein [Arabidopsis thaliana] gi|98961831|gb|ABF59245.1| unknown protein [Arabidopsis thaliana] gi|332658013|gb|AEE83413.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana]

 Score =  215 bits (548), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 102/117 (87%), Positives = 107/117 (91%)

Query: 1   MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYG 60
           MSD+AK+AWRKYLIQLQ HPLRTKAITAG+LAGCSDAIAQKISGVK++Q  RLLLLM YG
Sbjct: 1   MSDLAKDAWRKYLIQLQAHPLRTKAITAGVLAGCSDAIAQKISGVKRIQFRRLLLLMLYG 60

Query: 61  FAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVEG 117
           FAYGGPFGHF HKLMD IFKGKK   TVAKKVLLEQLTSSPWNNFLFM YYGLVVEG
Sbjct: 61  FAYGGPFGHFFHKLMDTIFKGKKGNSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEG 117

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297800820|ref|XP_002868294.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297314130|gb|EFH44553.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  214 bits (545), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 101/117 (86%), Positives = 106/117 (90%)

Query: 1   MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYG 60
           MSD+AK+AWRKYLIQLQ HPLRTKAITAG+L GCSDAIAQKISGVK++Q  RLLLLM YG
Sbjct: 1   MSDLAKDAWRKYLIQLQAHPLRTKAITAGVLTGCSDAIAQKISGVKRIQFRRLLLLMLYG 60

Query: 61  FAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVEG 117
           FAYGGPFGHF HKLMD IFKGKK   TVAKKVLLEQLTSSPWNNFLFM YYGLVVEG
Sbjct: 61  FAYGGPFGHFFHKLMDTIFKGKKGNSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEG 117

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225433201|ref|XP_002285350.1| PREDICTED: peroxisomal membrane protein PMP22 [Vitis vinifera] gi|296083689|emb|CBI23678.3| unnamed protein product [Vitis vinifera]

 Score =  208 bits (529), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 95/117 (81%), Positives = 105/117 (89%)

Query: 1   MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYG 60
           MSD+ K AWR YL+QLQ+HPLRTKAITAG+L GCSD IAQKISG+K+LQL RL+L+M YG
Sbjct: 1   MSDLIKAAWRNYLLQLQLHPLRTKAITAGVLVGCSDVIAQKISGIKRLQLRRLILMMLYG 60

Query: 61  FAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVEG 117
           FAY GPFGHFLHKLMDIIF+GKKD  TVAKKV+LEQLTSSPWNN  FMMYYGLVVEG
Sbjct: 61  FAYSGPFGHFLHKLMDIIFRGKKDNTTVAKKVVLEQLTSSPWNNMFFMMYYGLVVEG 117

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147795757|emb|CAN76530.1| hypothetical protein VITISV_012682 [Vitis vinifera]

 Score =  208 bits (529), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 95/117 (81%), Positives = 105/117 (89%)

Query: 1   MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYG 60
           MSD+ K AWR YL+QLQ+HPLRTKAITAG+L GCSD IAQKISG+K+LQL RL+L+M YG
Sbjct: 1   MSDLIKAAWRNYLLQLQLHPLRTKAITAGVLVGCSDVIAQKISGIKRLQLRRLILMMLYG 60

Query: 61  FAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVEG 117
           FAY GPFGHFLHKLMDIIF+GKKD  TVAKKV+LEQLTSSPWNN  FMMYYGLVVEG
Sbjct: 61  FAYSGPFGHFLHKLMDIIFRGKKDNTTVAKKVVLEQLTSSPWNNMFFMMYYGLVVEG 117

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575843|ref|XP_002528819.1| peroxisomal membrane protein 2, pxmp2, putative [Ricinus communis] gi|223531731|gb|EEF33553.1| peroxisomal membrane protein 2, pxmp2, putative [Ricinus communis]

 Score =  199 bits (506), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 102/117 (87%), Positives = 106/117 (90%)

Query: 1   MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYG 60
           MSD AKEAWRKYLIQLQ HPLRTKAITAG+LAGCSD IAQKISGVK+LQL RLLL+  YG
Sbjct: 1   MSDTAKEAWRKYLIQLQAHPLRTKAITAGVLAGCSDTIAQKISGVKRLQLRRLLLITLYG 60

Query: 61  FAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVEG 117
           FAYGGPFGHFLHKLMD IFKGKKD KTVAKKVLLEQL SSPWNN  FMMYYGL+VEG
Sbjct: 61  FAYGGPFGHFLHKLMDGIFKGKKDSKTVAKKVLLEQLVSSPWNNMFFMMYYGLIVEG 117

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449458842|ref|XP_004147155.1| PREDICTED: peroxisomal membrane protein PMP22-like [Cucumis sativus]

 Score =  194 bits (493), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 92/117 (78%), Positives = 101/117 (86%)

Query: 1   MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYG 60
           MS +  EAW+ YL+QLQ +PLRTKAITAG+LAG SD++AQKISG+KKLQ  RLLLLM YG
Sbjct: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  FAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVEG 117
           FAY GPFGHFLHKLMD IFKGKK   TVAKKVLLEQ+TSSPWNN  FMMYYGLVVEG
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEG 117

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449520295|ref|XP_004167169.1| PREDICTED: LOW QUALITY PROTEIN: peroxisomal membrane protein PMP22-like [Cucumis sativus]

 Score =  194 bits (493), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/117 (78%), Positives = 102/117 (87%)

Query: 1   MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYG 60
           MS +  EAW+ YL+QLQ +PLRTKAITAG+LAG SD++AQKISG+KKLQ  RLLLLM YG
Sbjct: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  FAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVEG 117
           FAY GPFGHFLHKLMD IFKGKK   TVAKKVLLEQ+TSSPWN F+FMMYYGLVVEG
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNXFIFMMYYGLVVEG 117

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115477897|ref|NP_001062544.1| Os08g0566900 [Oryza sativa Japonica Group] gi|42409095|dbj|BAD10346.1| putative peroxisomal membrane protein(22-kDa)(PMP22) [Oryza sativa Japonica Group] gi|113624513|dbj|BAF24458.1| Os08g0566900 [Oryza sativa Japonica Group] gi|215704770|dbj|BAG94798.1| unnamed protein product [Oryza sativa Japonica Group] gi|218201627|gb|EEC84054.1| hypothetical protein OsI_30329 [Oryza sativa Indica Group] gi|222641033|gb|EEE69165.1| hypothetical protein OsJ_28327 [Oryza sativa Japonica Group]

 Score =  189 bits (481), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 90/117 (76%), Positives = 99/117 (84%)

Query: 1   MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYG 60
           MSDV   A + Y+ QLQ HPLRTKAIT+G+LAGCSDAIAQKISGV  LQ  RLLL+M YG
Sbjct: 1   MSDVVAMAGQAYMRQLQAHPLRTKAITSGVLAGCSDAIAQKISGVPNLQRRRLLLIMLYG 60

Query: 61  FAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVEG 117
           FAY GPFGHFLHKLMD  FKGKK K+T AKKVL+EQLT+SPWNN +FMMYYGLVVEG
Sbjct: 61  FAYAGPFGHFLHKLMDRFFKGKKGKETTAKKVLVEQLTASPWNNMMFMMYYGLVVEG 117

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|195611428|gb|ACG27544.1| peroxisomal membrane protein PMP22 [Zea mays] gi|413921704|gb|AFW61636.1| peroxisomal membrane protein PMP22 [Zea mays]

 Score =  187 bits (475), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 88/117 (75%), Positives = 100/117 (85%)

Query: 1   MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYG 60
           MS+V   A + Y+ QLQ HPLRTKAIT+G+LAGCSDA+AQKISGV KLQL RLLL+  YG
Sbjct: 1   MSEVVAMAGQAYMKQLQAHPLRTKAITSGVLAGCSDAVAQKISGVSKLQLRRLLLIALYG 60

Query: 61  FAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVEG 117
           FAY GPFGHFLHKLMD  FKGKK K+T AKKVL+EQLT+SPWNN +FMMY+GLVVEG
Sbjct: 61  FAYAGPFGHFLHKLMDRFFKGKKGKETTAKKVLVEQLTASPWNNMMFMMYFGLVVEG 117

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413921703|gb|AFW61635.1| hypothetical protein ZEAMMB73_715532 [Zea mays]

 Score =  187 bits (474), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 88/117 (75%), Positives = 100/117 (85%)

Query: 1   MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYG 60
           MS+V   A + Y+ QLQ HPLRTKAIT+G+LAGCSDA+AQKISGV KLQL RLLL+  YG
Sbjct: 1   MSEVVAMAGQAYMKQLQAHPLRTKAITSGVLAGCSDAVAQKISGVSKLQLRRLLLIALYG 60

Query: 61  FAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVEG 117
           FAY GPFGHFLHKLMD  FKGKK K+T AKKVL+EQLT+SPWNN +FMMY+GLVVEG
Sbjct: 61  FAYAGPFGHFLHKLMDRFFKGKKGKETTAKKVLVEQLTASPWNNMMFMMYFGLVVEG 117

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	134
TAIR|locus:1009023385	185	AT4G14305 "AT4G14305" [Arabido	0.873	0.632	0.743	9.3e-43
TAIR|locus:2137124	190	PMP22 [Arabidopsis thaliana (t	0.828	0.584	0.459	1e-22
DICTYBASE|DDB_G0290631	185	DDB_G0290631 "pmp22 family pro	0.820	0.594	0.327	6.8e-08
FB|FBgn0035252	191	CG7970 [Drosophila melanogaste	0.776	0.544	0.283	8.7e-07
ASPGD|ASPL0000063859	252	AN7258 [Emericella nidulans (t	0.768	0.408	0.261	1.4e-06
UNIPROTKB|G3V9N2	194	Pxmp2 "Peroxisomal membrane pr	0.925	0.639	0.253	2.1e-06
MGI|MGI:107487	194	Pxmp2 "peroxisomal membrane pr	0.925	0.639	0.253	2.9e-06
RGD|61812	194	Pxmp2 "peroxisomal membrane pr	0.925	0.639	0.253	2.9e-06
DICTYBASE|DDB_G0290223	184	DDB_G0290223 "pmp22 family pro	0.746	0.543	0.262	6.8e-06
UNIPROTKB|Q2KIY1	196	PXMP2 "Peroxisomal membrane pr	0.567	0.387	0.313	8.8e-06

TAIR|locus:1009023385 AT4G14305 "AT4G14305" [Arabidopsis thaliana (taxid:3702)]

 Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
 Identities = 87/117 (74%), Positives = 91/117 (77%)

Query:     1 MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKXXXXXXXXXMFYG 60
             MSD+AK+AWRKYLIQLQ HPLRTKAITAG+LAGCSDAIAQKISGVK+         M YG
Sbjct:     1 MSDLAKDAWRKYLIQLQAHPLRTKAITAGVLAGCSDAIAQKISGVKRIQFRRLLLLMLYG 60

Query:    61 FAYGGPFGHFLHKLMDIIFXXXXXXXXXXXXVLLEQLTSSPWNNFLFMMYYGLVVEG 117
             FAYGGPFGHF HKLMD IF            VLLEQLTSSPWNNFLFM YYGLVVEG
Sbjct:    61 FAYGGPFGHFFHKLMDTIFKGKKGNSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEG 117

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2137124 PMP22 [Arabidopsis thaliana (taxid:3702)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 51/111 (45%), Positives = 69/111 (62%)

Query:     6 KEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKXXXXXXXXXMFYGFAYGG 65
             K   ++YL QLQ HPLRTKAITAG+L+G SD ++QK+SG++K         + +   + G
Sbjct:     8 KTTLQRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLG 67

Query:    66 PFGHFLHKLMDIIFXXXXXXXXXXXXVLLEQLTSSPWNNFLFMMYYGLVVE 116
             P GHF H  +D  F            V+LEQLT SP N+ LFM+YYG+V+E
Sbjct:    68 PAGHFFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIE 118

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IDA

DICTYBASE|DDB_G0290631 DDB_G0290631 "pmp22 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
 Identities = 38/116 (32%), Positives = 53/116 (45%)

Query:     6 KEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKIS----GVKKXXXXXXXXXMFYGF 61
             K A   YL QL  +P+ TKA+T+G L   SD++ Q I       KK           +GF
Sbjct:     9 KLAQSHYLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFGF 68

Query:    62 AYGGPFGHFLHKLMDIIFXXXXXXXXXXXXVLLEQLTSSPWNNFLFMMYYGLVVEG 117
             A  GP  H+  K +D  F            + ++Q+  SP  NFLF    G ++EG
Sbjct:    69 AVTGPLFHYWFKYLDKHFPKKSYRHAFIK-LTIDQVVCSPVFNFLFFSGMG-ILEG 122

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

FB|FBgn0035252 CG7970 [Drosophila melanogaster (taxid:7227)]

 Score = 113 (44.8 bits), Expect = 8.7e-07, P = 8.7e-07
 Identities = 30/106 (28%), Positives = 50/106 (47%)

Query:    12 YLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKXXXXXXXXXMFYGFAYGGPFGHFL 71
             YL QL  HP+RTK+ITA +LA  ++  +Q+++G K            +G  +GG   H+ 
Sbjct:    14 YLEQLFNHPVRTKSITACVLATSANVTSQRLAGAKTLNQQSVFAYGLFGLIFGGSVPHYF 73

Query:    72 HKLMDIIFXXXXXXXXXXXXVLLEQLTSSPWNNFLFMMYYGLVVEG 117
             +  ++ +F             L E+L  +P    L + +  L  EG
Sbjct:    74 YTTVERLFSQDVRFRRFFLF-LSERLVYAPIYQALSLFFLALF-EG 117

GO:0005829 "cytosol" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA

ASPGD|ASPL0000063859 AN7258 [Emericella nidulans (taxid:162425)]

 Score = 115 (45.5 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 28/107 (26%), Positives = 47/107 (43%)

Query:    12 YLIQLQVHPLRTKAITAGILAGCSDAIAQKISG-VKKXXXXXXXXX---MFYGFAYGGPF 67
             YL QLQ +PLRTK +T+G+L+   + +A  ++  V K            + YG     P 
Sbjct:    51 YLRQLQSNPLRTKMLTSGVLSSAQEFLASYLANDVSKHGHYFSSRVPKMLLYGMFISAPL 110

Query:    68 GHFLHKLMDIIFXXXXXXXXXXXXVLLEQLTSSPWNNFLFMMYYGLV 114
             GH L  ++  +F            +L   L  SP  N +++    ++
Sbjct:   111 GHVLVGILQKVFAGRTSLKAKVLQILASNLIVSPIQNVVYLTCMAII 157

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|G3V9N2 Pxmp2 "Peroxisomal membrane protein 2, isoform CRA_b" [Rattus norvegicus (taxid:10116)]

 Score = 110 (43.8 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 34/134 (25%), Positives = 65/134 (48%)

Query:     1 MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKXXXXXXXXX---- 56
             +  + K A  +YL+ L+ +P+ TKA+++GIL+   + +AQ I   +K             
Sbjct:    14 LGSLPKRALAQYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLR 73

Query:    57 -MFYGFAYGGPFGHFLHKLMDIIFXXXXXXXXXXXXVLLEQLTSSPWNNFLFMMYYGL-V 114
              + YG    GP  H+L+  M+  +            +LL++L  +P   FL + ++ + +
Sbjct:    74 YLVYGLFVTGPLSHYLYLFMEY-WVPPEVPWARVKRLLLDRLFFAP--TFLLLFFFVMNL 130

Query:   115 VEGVAVRFNFVGKI 128
             +EG  +   FV K+
Sbjct:   131 LEGKNISV-FVAKM 143

GO:0005739 "mitochondrion" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

MGI|MGI:107487 Pxmp2 "peroxisomal membrane protein 2" [Mus musculus (taxid:10090)]

 Score = 109 (43.4 bits), Expect = 2.9e-06, P = 2.9e-06
 Identities = 34/134 (25%), Positives = 65/134 (48%)

Query:     1 MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKXXXXXXXXX---- 56
             +  + K A  +YL+ L+++P+ TKA+++GIL+   + +AQ I   ++             
Sbjct:    14 LGSLPKRALAQYLLLLKLYPVLTKAVSSGILSALGNLLAQTIEKKQRKDSRLLEVSGLLR 73

Query:    57 -MFYGFAYGGPFGHFLHKLMDIIFXXXXXXXXXXXXVLLEQLTSSPWNNFLFMMYYGL-V 114
              + YG    GP  H+L+  M+               +LL++L  +P   FL + ++ + +
Sbjct:    74 YLVYGLFVTGPLSHYLYLFMEYSVPPEVPWASVKR-LLLDRLFFAP--TFLLLFFFVMNL 130

Query:   115 VEGVAVRFNFVGKI 128
             +EG  V   FV K+
Sbjct:   131 LEGKNVSV-FVAKM 143

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=IDA

GO:0005777 "peroxisome" evidence=ISO

GO:0005778 "peroxisomal membrane" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0043234 "protein complex" evidence=ISO

RGD|61812 Pxmp2 "peroxisomal membrane protein 2" [Rattus norvegicus (taxid:10116)]

 Score = 109 (43.4 bits), Expect = 2.9e-06, P = 2.9e-06
 Identities = 34/134 (25%), Positives = 65/134 (48%)

Query:     1 MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKXXXXXXXXX---- 56
             +  + K A  +YL+ L+ +P+ TKA+++GIL+   + +AQ I   +K             
Sbjct:    14 LRSLPKRALAQYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLR 73

Query:    57 -MFYGFAYGGPFGHFLHKLMDIIFXXXXXXXXXXXXVLLEQLTSSPWNNFLFMMYYGL-V 114
              + YG    GP  H+L+  M+  +            +LL++L  +P   FL + ++ + +
Sbjct:    74 YLVYGLFVTGPLSHYLYLFMEY-WVPPEVPWARVKRLLLDRLFFAP--TFLLLFFFVMNL 130

Query:   115 VEGVAVRFNFVGKI 128
             +EG  +   FV K+
Sbjct:   131 LEGKNISV-FVAKM 143

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO

GO:0005777 "peroxisome" evidence=IDA

GO:0005778 "peroxisomal membrane" evidence=ISO;IDA

GO:0005779 "integral to peroxisomal membrane" evidence=TAS

GO:0043234 "protein complex" evidence=ISO

DICTYBASE|DDB_G0290223 DDB_G0290223 "pmp22 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 105 (42.0 bits), Expect = 6.8e-06, P = 6.8e-06
 Identities = 27/103 (26%), Positives = 47/103 (45%)

Query:     5 AKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKXXXXXXXXXMFYGFAYG 64
             A   W  Y+ +L+  P++TKA+T+  L+  S  +AQK    KK           +G    
Sbjct:    12 AVTTW--YMKKLKSKPIQTKALTSATLSFISSVVAQKFIEKKKINWNAVVKFTVWGLI-S 68

Query:    65 GPFGHFLHKLMDIIFXXXXXXXXXXXXVLLEQLTSSPWNNFLF 107
              P  H+ H ++D +F            ++++QL  +P+ N  F
Sbjct:    69 SPLVHYWHIILDRLFKNIKDKYQSWGKLIVDQLVFAPFINIAF 111

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|Q2KIY1 PXMP2 "Peroxisomal membrane protein 2" [Bos taurus (taxid:9913)]

 Score = 105 (42.0 bits), Expect = 8.8e-06, P = 8.8e-06
 Identities = 26/83 (31%), Positives = 43/83 (51%)

Query:     1 MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKXXXXXXXXXM--- 57
             +  + + A  +YL  L+++P+ TKA T+GIL+   + +AQ I   +K         +   
Sbjct:    14 LGPLPRRALSQYLRLLRLYPVLTKAATSGILSALGNFLAQLIEKKQKKENCSQKLDVSGP 73

Query:    58 ----FYGFAYGGPFGHFLHKLMD 76
                  YGF + GP GHF + LM+
Sbjct:    74 LRYAIYGFFFTGPLGHFFYLLME 96

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: AT4G14305 unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- integral to membrane; CONTAINS InterPro DOMAIN/s- Mpv17/PMP22 (InterPro-IPR007248); BEST Arabidopsis thaliana protein match is- PMP22 (TAIR-AT4G04470.1); Has 957 Blast hits to 957 proteins in 126 species- Archae - 0; Bacteria - 0; Metazoa - 456; Fungi - 286; Plants - 164; Viruses - 0; Other Eukaryotes - 51 (source- NCBI BLink). (185 aa) (Arabidopsis thaliana)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	134
KOG1944	222	consensus Peroxisomal membrane protein MPV17 and r	99.91
PF04117	68	Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR0	91.09

>KOG1944 consensus Peroxisomal membrane protein MPV17 and related proteins [General function prediction only]

Probab=99.91  E-value=1.5e-23  Score=159.97  Aligned_cols=115  Identities=35%  Similarity=0.518  Sum_probs=107.0

Q ss_pred             HhhCcHHHHHHHHHHHH-HHHHHHHHhHhc-----CCcchHHHHHHHHHHhhhccchhHhHHHHHHHhHccCCCcHHHHH
Q 032748           16 LQVHPLRTKAITAGILA-GCSDAIAQKISG-----VKKLQLTRLLLLMFYGFAYGGPFGHFLHKLMDIIFKGKKDKKTVA   89 (134)
Q Consensus        16 l~~~Pl~t~~~ts~~l~-~~gD~laQ~~~~-----~~~~D~~Rt~r~~~~G~~~~gP~~h~wy~~L~~~~~~~~~~~~~~   89 (134)
                      ...+|+.++.++++.+. .+||+++|.++.     .+.+|+.|++||+++|+++.||.+|+||+.||+.+|. ++..+++
T Consensus        46 ~~~~~~l~~~i~~~~~~~~~~d~~~q~~~~~~~~~~~~~d~~rtlr~~~~G~~f~gp~~~~Wy~~L~~~~p~-~~~~~~~  124 (222)
T KOG1944|consen   46 FSLYPLLTKAITTSLLLAAAGDVISQSLEGRSKKLFQTLDLTRTLRMGIFGFLFVGPTLHYWYRLLSKLFPK-KTLITVV  124 (222)
T ss_pred             hhhhhHHHHHHHHHHHHHHhchhhhhhhhhhcccccccccHHHHHHHHhhhhheeccchhHHHHHHHHHccC-ccHHHHH
Confidence            46688888888888888 999999999863     3679999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhhh
Q 032748           90 KKVLLEQLTSSPWNNFLFMMYYGLVVEGVAVRFNFVGKIMEFS  132 (134)
Q Consensus        90 ~Kvl~DQ~i~~P~~~~~f~~~~~~~leg~~~~~~~~~~~~~f~  132 (134)
                      +|++.||++++|+.+.+||.+++ ++||++.+++.++.+.+|-
T Consensus       125 ~kvl~dql~~~P~~~~~ff~~~~-~legk~~~~~~~~~~~~~~  166 (222)
T KOG1944|consen  125 KKVLLDQLVFAPLFIVVFFLLMG-LLEGKTNEEAKAKLKRKFW  166 (222)
T ss_pred             HHHHHhhhhhchHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999 9999999999999998873

>PF04117 Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR007248 The 22 kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes

Probab=91.09  E-value=0.12  Score=32.04  Aligned_cols=21  Identities=14%  Similarity=0.050  Sum_probs=19.0

Q ss_pred             HHHHhCCCCHHHHHHHHHhhhh
Q 032748          111 YGLVVEGVAVRFNFVGKIMEFS  132 (134)
Q Consensus       111 ~~~~leg~~~~~~~~~~~~~f~  132 (134)
                      |+ ++||+|++++.++.|.+|.
T Consensus         1 Mg-~l~g~s~~~~~~~l~~~~~   21 (68)
T PF04117_consen    1 MG-LLEGKSWEEIKEKLKRDYW   21 (68)
T ss_pred             CC-cccCCCHHHHHHHHHHHHH
Confidence            46 8999999999999999885

PMP22 seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information []. Mpv17 is a closely related peroxisomal protein involved in the development of early-onset glomerulosclerosis []. A member of this family found in Saccharomyces cerevisiae (Baker's yeast) is an integral membrane protein of the inner mitochondrial membrane and has been suggested to play a role in mitochondrial function during heat shock [].; GO: 0016021 integral to membrane

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00