Citrus Sinensis ID: 032807

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130---
Protein Sequence
MAYEIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLFTNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWIIQYPLMVLDRLKGG
Secondary Structure (PSIPRED)
ccEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccEEEEEHHHHHHHHccHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccccccEEEEEccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEccHHHHHHHccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccHHccccEEEHHHcccc
Coil and Loop (DISEMBL)
MAYEIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLFTNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWIIQYPLMVLDRLKGG
Flexible Loop (DISEMBL)
mayeiderkkigfGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLFTNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWIIQYPLMVLDRLKGG
Low Complexity Region (SEG)
MAYEIDERKKigfgligfgifftflaiilffDRGLLALGNIlwltgvtlllglQSTWKLFTNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWIIQYPLMVLDRLKGG
Disordered region (IsUnstruct)
********KKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLFTNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWIIQYPLMVLDR****
Disordered Region (DISOPRED)
******ERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLFTNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWIIQYPLMVLDRLKG*
Disordered Region (DISEMBL)
MAYEIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLFTNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWIIQYPLMVLDRLKGG
Disordered Region (DISPRO)
*AYEIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLFTNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWIIQYPLMVLDRLKG*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAYEIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLFTNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWIIQYPLMVLDRLKGG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	133	2.2.26 [Sep-21-2011]
Q9DCQ3	133	Vesicle transport protein	yes	no	0.887	0.887	0.462	2e-21
Q2NKV8	132	Vesicle transport protein	yes	no	0.887	0.893	0.446	3e-20
Q20263	141	Probable Golgi transport	yes	no	0.984	0.929	0.413	7e-20
Q6ZVE7	132	Vesicle transport protein	yes	no	0.857	0.863	0.452	2e-18
Q54CL4	138	Protein transport protein	yes	no	0.894	0.862	0.45	6e-18
Q9CR60	138	Vesicle transport protein	no	no	0.902	0.869	0.441	5e-15
Q03554	138	Protein transport protein	yes	no	0.759	0.731	0.417	6e-15
Q9Y3E0	138	Vesicle transport protein	no	no	0.902	0.869	0.433	1e-14
Q2YDE3	138	Vesicle transport protein	no	no	0.902	0.869	0.433	1e-14
Q9USJ2	129	Protein transport protein	yes	no	0.879	0.906	0.341	1e-07

>sp|Q9DCQ3|GOT1A_MOUSE Vesicle transport protein GOT1A OS=Mus musculus GN=Golt1a PE=2 SV=1

 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/121 (46%), Positives = 82/121 (67%), Gaps = 3/121 (2%)

Query: 4   EIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLFTNR 63
            I E +KIG G+ GFG+FF    I+L+FD  LLA GN+L+LTG++L++GL+ T+  F  R
Sbjct: 3   SITEWQKIGVGITGFGVFFILFGILLYFDSVLLAFGNLLFLTGLSLIIGLRRTFAFFFQR 62

Query: 64  ANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFL---YQIPVVGWII 120
              KG+  FL G+  + +RWP++G++LE YGFI+LF GF+P V  FL   + IP +  + 
Sbjct: 63  HKLKGTSFFLGGVAIVLLRWPLLGMLLEAYGFISLFKGFFPVVFGFLGSAFNIPFLSTLF 122

Query: 121 Q 121
           Q
Sbjct: 123 Q 123

May be involved in fusion of ER-derived transport vesicles with the Golgi complex.
Mus musculus (taxid: 10090)

>sp|Q2NKV8|GOT1A_BOVIN Vesicle transport protein GOT1A OS=Bos taurus GN=GOLT1A PE=2 SV=1

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 54/121 (44%), Positives = 78/121 (64%), Gaps = 3/121 (2%)

Query: 4   EIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLFTNR 63
            I E +KIG G  GFGIFF    ++L+FD  LLA GN+L+LTG++L++GL+ T+  F  R
Sbjct: 3   SITEWQKIGVGTTGFGIFFILFGMLLYFDSVLLAFGNLLFLTGLSLIIGLRRTFSFFFQR 62

Query: 64  ANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFL---YQIPVVGWII 120
             +KG+  FL G+  + +RWP++G+ LE YGF +LF GF+P    FL     IP +  + 
Sbjct: 63  HKFKGTSFFLGGVVIVLLRWPLLGMCLETYGFFSLFRGFFPVAFGFLGSASNIPFLSALF 122

Query: 121 Q 121
           Q
Sbjct: 123 Q 123

May be involved in fusion of ER-derived transport vesicles with the Golgi complex.

Bos taurus (taxid: 9913)

>sp|Q20263|GOT1_CAEEL Probable Golgi transport protein 1 OS=Caenorhabditis elegans GN=F41C3.4 PE=3 SV=2

 Score = 95.9 bits (237), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 55/133 (41%), Positives = 77/133 (57%), Gaps = 2/133 (1%)

Query: 1   MAYEIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLF 60
           M +E+   K+IG GL  FG FF FL +++F D  LLA+GN+L++ G+T ++G+Q T   F
Sbjct: 2   MNFEVSTTKQIGVGLTTFGFFFIFLGVLMFLDSALLAIGNLLFIVGITFIIGVQRTLVFF 61

Query: 61  TNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWII 120
                 KGSI F  G+  +   +P+ G+I E +GFI LF GF P +   L  IP +  I 
Sbjct: 62  FEFRKLKGSILFFGGILVVLFGYPLFGMIAECWGFIVLFGGFLPGIVNLLRSIPGISTIT 121

Query: 121 QYP--LMVLDRLK 131
             P    VLDRL 
Sbjct: 122 YLPGIRQVLDRLA 134

May be involved in fusion of ER-derived transport vesicles with the Golgi complex.

Caenorhabditis elegans (taxid: 6239)

>sp|Q6ZVE7|GOT1A_HUMAN Vesicle transport protein GOT1A OS=Homo sapiens GN=GOLT1A PE=2 SV=1

 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/117 (45%), Positives = 75/117 (64%), Gaps = 3/117 (2%)

Query: 4   EIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLFTNR 63
            I E +KIG G+ GFGIFF     +L+FD  LLA GN+L+LTG++L++GL+ T+  F  R
Sbjct: 3   SITEWQKIGVGITGFGIFFILFGTLLYFDSVLLAFGNLLFLTGLSLIIGLRKTFWFFFQR 62

Query: 64  ANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFL---YQIPVVG 117
              KG+   L G+  + +RWP++G+ LE YGF +LF GF+P    FL     IP +G
Sbjct: 63  HKLKGTSFLLGGVVIVLLRWPLLGMFLETYGFFSLFKGFFPVAFGFLGNVCNIPFLG 119

May be involved in fusion of ER-derived transport vesicles with the Golgi complex.

Homo sapiens (taxid: 9606)

>sp|Q54CL4|GOT1_DICDI Protein transport protein got1 homolog OS=Dictyostelium discoideum GN=golt1 PE=3 SV=1

 Score = 89.4 bits (220), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 54/120 (45%), Positives = 81/120 (67%), Gaps = 1/120 (0%)

Query: 7   ERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLFTNRANY 66
           +++KIG  L   G+FF FL ++LF DR LLALGN+L ++G+ L+LGLQ T K F  +   
Sbjct: 4   DQQKIGAMLSAMGLFFGFLGVLLFLDRNLLALGNLLLVSGIVLILGLQKTTKFFAQKKKI 63

Query: 67  KGSICFLLGLFFLFV-RWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWIIQYPLM 125
           KG+I F  G+  L V RW  VG+++EI+GF+ LF   +P V   L ++P++G I+ +PL+
Sbjct: 64  KGTILFFFGIVVLLVTRWTFVGMVIEIFGFVNLFGDAFPIVISILRKLPIIGNILNHPLV 123

May be involved in fusion of ER-derived transport vesicles with the Golgi complex.

Dictyostelium discoideum (taxid: 44689)

>sp|Q9CR60|GOT1B_MOUSE Vesicle transport protein GOT1B OS=Mus musculus GN=Golt1b PE=2 SV=1

 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/120 (44%), Positives = 83/120 (69%)

Query: 4   EIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLFTNR 63
            + + +KIG GL GFG+FF F  +ILFFD+ LLA+GN+L++ G+  ++GL+ T++ F  R
Sbjct: 3   SLTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQR 62

Query: 64  ANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWIIQYP 123
              K +  FL G+F + + WP++G+I EIYGF  LF GF+P V  F+ ++PV+G ++  P
Sbjct: 63  HKVKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLP 122

May be involved in fusion of ER-derived transport vesicles with the Golgi complex.

Mus musculus (taxid: 10090)

>sp|Q03554|GOT1_YEAST Protein transport protein GOT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GOT1 PE=1 SV=1

 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 43/103 (41%), Positives = 66/103 (64%), Gaps = 2/103 (1%)

Query: 32  DRGLLALGNILWLTGVTLLLGLQSTWKLFTNRANYKGSICFLLGLFFLFVRWPIVGIILE 91
           DR LLALGNIL+L GV L++G Q T+  FT     +GS+ FL+G F + ++W  +G I+E
Sbjct: 30  DRALLALGNILFLIGVFLIIGSQKTYIFFTRPNKRRGSLFFLVGAFLILLKWTFLGFIIE 89

Query: 92  IYGFIALFSGFWPSVKVFLYQIPVVGWIIQYPLM--VLDRLKG 132
             G I LF  F+  +  FL  +P++G I+ +P +  ++D+L G
Sbjct: 90  SLGIIGLFGDFFGVIVQFLRSMPIIGPILSHPAIAPIVDKLAG 132

Nonessential protein required for the fusion of ER-derived transport vesicles with the Golgi complex. Can be replaced by SFT2.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q9Y3E0|GOT1B_HUMAN Vesicle transport protein GOT1B OS=Homo sapiens GN=GOLT1B PE=1 SV=1

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 83/120 (69%)

Query: 4   EIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLFTNR 63
            + + +KIG GL GFG+FF F  +ILFFD+ LLA+GN+L++ G+  ++GL+ T++ F  +
Sbjct: 3   SLTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQK 62

Query: 64  ANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWIIQYP 123
              K +  FL G+F + + WP++G+I EIYGF  LF GF+P V  F+ ++PV+G ++  P
Sbjct: 63  HKMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLP 122

May be involved in fusion of ER-derived transport vesicles with the Golgi complex.

Homo sapiens (taxid: 9606)

>sp|Q2YDE3|GOT1B_BOVIN Vesicle transport protein GOT1B OS=Bos taurus GN=GOLT1B PE=2 SV=1

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 83/120 (69%)

Query: 4   EIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLFTNR 63
            + + +KIG GL GFG+FF F  +ILFFD+ LLA+GN+L++ G+  ++GL+ T++ F  +
Sbjct: 3   SLTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQK 62

Query: 64  ANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWIIQYP 123
              K +  FL G+F + + WP++G+I EIYGF  LF GF+P V  F+ ++PV+G ++  P
Sbjct: 63  HKMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLP 122

May be involved in fusion of ER-derived transport vesicles with the Golgi complex.

Bos taurus (taxid: 9913)

>sp|Q9USJ2|GOT1_SCHPO Protein transport protein got1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=got1 PE=3 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 59/117 (50%)

Query: 5   IDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLFTNRA 64
           + + +KIG G    G  F  + I +FFD  LL+LGN+L + G  ++ G   +   F  + 
Sbjct: 3   LSDLQKIGVGTTALGFLFMIMGIFMFFDGPLLSLGNLLLVFGFFMIAGFSKSVSFFLRKD 62

Query: 65  NYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWIIQ 121
              GSI F  GL      +PI+G  +E  GF  LF  F+P +  FL  +P +G  I 
Sbjct: 63  RMLGSISFFSGLLLTLFHFPIIGFFVECLGFFNLFKVFYPLIISFLRTVPYIGPYID 119

Nonessential protein required for the fusion of ER-derived transport vesicles with the Golgi complex. Can be replaced by sft2.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	133
255580396	135	Vesicle transport protein GOT1B, putativ	1.0	0.985	0.796	1e-53
224131568	135	predicted protein [Populus trichocarpa]	1.0	0.985	0.804	3e-53
225433762	123	PREDICTED: vesicle transport protein GOT	0.917	0.991	0.795	5e-48
449441157	135	PREDICTED: vesicle transport protein GOT	0.977	0.962	0.723	8e-47
22329359	135	Got1/Sft2-like vescicle transport protei	1.0	0.985	0.714	2e-46
356567294	174	PREDICTED: vesicle transport protein GOT	0.917	0.701	0.803	5e-46
212722090	135	uncharacterized protein LOC100193440 [Ze	0.984	0.970	0.664	1e-42
357501483	126	Vesicle transport protein GOT1B [Medicag	0.917	0.968	0.795	4e-39
242062240	135	hypothetical protein SORBIDRAFT_04g02522	0.984	0.970	0.656	5e-38
388520013	126	unknown [Lotus japonicus]	0.917	0.968	0.778	9e-38

>gi|255580396|ref|XP_002531025.1| Vesicle transport protein GOT1B, putative [Ricinus communis] gi|223529400|gb|EEF31363.1| Vesicle transport protein GOT1B, putative [Ricinus communis]

 Score =  214 bits (545), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 106/133 (79%), Positives = 121/133 (90%)

Query: 1   MAYEIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLF 60
           MAYE++E+KKIG GLIGFGI F+FL ++LFFDRGLLALGNI WLTGV +LLG  STW LF
Sbjct: 1   MAYELNEQKKIGLGLIGFGILFSFLGVLLFFDRGLLALGNIFWLTGVAILLGWHSTWNLF 60

Query: 61  TNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWII 120
           TNRANYKG+I FLLGLFF+FVRWPIVGI+LEIYG IALF GFWP+VKVFLYQIPVVGWII
Sbjct: 61  TNRANYKGTISFLLGLFFIFVRWPIVGIVLEIYGCIALFGGFWPTVKVFLYQIPVVGWII 120

Query: 121 QYPLMVLDRLKGG 133
           QYP+++L RL+GG
Sbjct: 121 QYPVLLLGRLRGG 133

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131568|ref|XP_002321118.1| predicted protein [Populus trichocarpa] gi|222861891|gb|EEE99433.1| predicted protein [Populus trichocarpa]

 Score =  213 bits (541), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 107/133 (80%), Positives = 118/133 (88%)

Query: 1   MAYEIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLF 60
           MAYEI+E KKIG GLIGFGIFFTFL  +LFFDRGLLALGNI WL+GV +LLG +STWKLF
Sbjct: 1   MAYEINELKKIGLGLIGFGIFFTFLGALLFFDRGLLALGNIFWLSGVAILLGWRSTWKLF 60

Query: 61  TNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWII 120
           TNR NYKGS+CFLLGLFF+FVRWP+VGII EIY  IALF GFWPSVKVFLYQIPVVGWII
Sbjct: 61  TNRENYKGSVCFLLGLFFIFVRWPVVGIIFEIYSCIALFGGFWPSVKVFLYQIPVVGWII 120

Query: 121 QYPLMVLDRLKGG 133
           QYP+ +LD L+ G
Sbjct: 121 QYPITLLDYLRRG 133

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225433762|ref|XP_002271144.1| PREDICTED: vesicle transport protein GOT1A [Vitis vinifera] gi|297745163|emb|CBI39155.3| unnamed protein product [Vitis vinifera]

 Score =  195 bits (496), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 97/122 (79%), Positives = 110/122 (90%)

Query: 1   MAYEIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLF 60
           MAYE+ E+K++G GLIGFGIFFTFL +ILFFDRGLLALGNI WLTGV LL+G +STW LF
Sbjct: 1   MAYEMTEQKRVGLGLIGFGIFFTFLGVILFFDRGLLALGNIFWLTGVALLIGWRSTWNLF 60

Query: 61  TNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWII 120
           +NRANYKGSI FLLGLF +FVRWPIVGII EIYG+I LF GFWPSVKVFLYQIPVVGWI+
Sbjct: 61  SNRANYKGSISFLLGLFLIFVRWPIVGIIFEIYGYIVLFGGFWPSVKVFLYQIPVVGWIL 120

Query: 121 QY 122
           ++
Sbjct: 121 RF 122

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441157|ref|XP_004138350.1| PREDICTED: vesicle transport protein GOT1B-like isoform 2 [Cucumis sativus] gi|449441159|ref|XP_004138351.1| PREDICTED: vesicle transport protein GOT1B-like isoform 3 [Cucumis sativus] gi|449496741|ref|XP_004160214.1| PREDICTED: vesicle transport protein GOT1B-like isoform 2 [Cucumis sativus] gi|449496744|ref|XP_004160215.1| PREDICTED: vesicle transport protein GOT1B-like isoform 3 [Cucumis sativus]

 Score =  191 bits (485), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 94/130 (72%), Positives = 111/130 (85%)

Query: 1   MAYEIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLF 60
           MAYE+ E+K++G GLIGFG FFTFLA+ILFFDRGLLALGN+ WL GV LLLG  STW LF
Sbjct: 1   MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLF 60

Query: 61  TNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWII 120
           T+RANYKGS  FLLGLFF+FVRWPI+GI+LEI G   LF GFWPS+K FLYQIPV+GW++
Sbjct: 61  TSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVL 120

Query: 121 QYPLMVLDRL 130
            YP+M+L+ L
Sbjct: 121 PYPIMILESL 130

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22329359|ref|NP_683279.1| Got1/Sft2-like vescicle transport protein [Arabidopsis thaliana] gi|30679437|ref|NP_850935.1| Got1/Sft2-like vescicle transport protein [Arabidopsis thaliana] gi|26452699|dbj|BAC43432.1| unknown protein [Arabidopsis thaliana] gi|28973521|gb|AAO64085.1| unknown protein [Arabidopsis thaliana] gi|332189770|gb|AEE27891.1| Got1/Sft2-like vescicle transport protein [Arabidopsis thaliana] gi|332189771|gb|AEE27892.1| Got1/Sft2-like vescicle transport protein [Arabidopsis thaliana]

 Score =  189 bits (481), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 95/133 (71%), Positives = 111/133 (83%)

Query: 1   MAYEIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLF 60
           M YEI E+KK+G GLIGFG+ FTFL +IL+FDRGLLALGN+ WL GV LLLG QSTW++F
Sbjct: 1   MVYEITEQKKVGLGLIGFGLSFTFLGVILYFDRGLLALGNLFWLIGVGLLLGWQSTWRVF 60

Query: 61  TNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWII 120
           TN  N +G+ICF+LGLF +FVRWPI+GIILEIYG I LF GFW +VK FL QIP VGWII
Sbjct: 61  TNVNNLRGTICFVLGLFLIFVRWPIIGIILEIYGVIVLFGGFWSTVKAFLSQIPFVGWII 120

Query: 121 QYPLMVLDRLKGG 133
           QYPLMVL++L  G
Sbjct: 121 QYPLMVLEQLVRG 133

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567294|ref|XP_003551856.1| PREDICTED: vesicle transport protein GOT1A-like [Glycine max]

 Score =  188 bits (478), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 98/122 (80%), Positives = 106/122 (86%)

Query: 1   MAYEIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLF 60
           MAYEI E KKIG GLIGFG+FFTFL IILFFDRGLLALGNI  L GV +LLG +STW LF
Sbjct: 1   MAYEITEIKKIGIGLIGFGLFFTFLGIILFFDRGLLALGNIFSLAGVGILLGWRSTWALF 60

Query: 61  TNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWII 120
           TNRAN+KGS  FLLGLFF+FVRWPIVGIILEIYG + LFSGFW S+KVFLY IPVVGWII
Sbjct: 61  TNRANFKGSASFLLGLFFIFVRWPIVGIILEIYGCVFLFSGFWSSIKVFLYHIPVVGWII 120

Query: 121 QY 122
           Q+
Sbjct: 121 QF 122

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|212722090|ref|NP_001132031.1| uncharacterized protein LOC100193440 [Zea mays] gi|194693248|gb|ACF80708.1| unknown [Zea mays] gi|195623924|gb|ACG33792.1| golgi transport 1 protein B [Zea mays] gi|413922933|gb|AFW62865.1| golgi transport 1 protein B isoform 1 [Zea mays] gi|413922934|gb|AFW62866.1| golgi transport 1 protein B isoform 2 [Zea mays]

 Score =  177 bits (449), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 87/131 (66%), Positives = 107/131 (81%)

Query: 1   MAYEIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLF 60
           MAYEI E KKIG GL+GFGI F+FL +ILFFDRGLLALGNI +LTGV LLLG QS W+LF
Sbjct: 1   MAYEISEIKKIGIGLVGFGILFSFLGVILFFDRGLLALGNIFFLTGVGLLLGWQSMWQLF 60

Query: 61  TNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWII 120
           T +AN KGS+ F +GLF LFVRWP+ GII+E+YG   LFSG+ P ++ FLYQIP++GWI+
Sbjct: 61  TKKANLKGSVPFFIGLFLLFVRWPVAGIIMELYGSFVLFSGYGPPIQAFLYQIPIIGWIL 120

Query: 121 QYPLMVLDRLK 131
           QYP  +L +L+
Sbjct: 121 QYPFQLLGQLR 131

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357501483|ref|XP_003621030.1| Vesicle transport protein GOT1B [Medicago truncatula] gi|124360690|gb|ABN08679.1| Got1-like protein [Medicago truncatula] gi|355496045|gb|AES77248.1| Vesicle transport protein GOT1B [Medicago truncatula] gi|388497502|gb|AFK36817.1| unknown [Medicago truncatula]

 Score =  166 bits (419), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 97/122 (79%), Positives = 107/122 (87%)

Query: 1   MAYEIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLF 60
           MAY+IDE KKIG GLIGFGIFFTFL IILFFDRGLLALGNI WL GV +LLG +S W LF
Sbjct: 1   MAYDIDEMKKIGIGLIGFGIFFTFLGIILFFDRGLLALGNIFWLAGVAILLGWRSMWSLF 60

Query: 61  TNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWII 120
           T+RANYKG+  FLLGLFF+FVRWPIVGIILEIYG + LFSGFW SVKVFLY IPVVGW+I
Sbjct: 61  TSRANYKGTASFLLGLFFIFVRWPIVGIILEIYGCVFLFSGFWSSVKVFLYHIPVVGWVI 120

Query: 121 QY 122
           ++
Sbjct: 121 RF 122

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242062240|ref|XP_002452409.1| hypothetical protein SORBIDRAFT_04g025220 [Sorghum bicolor] gi|241932240|gb|EES05385.1| hypothetical protein SORBIDRAFT_04g025220 [Sorghum bicolor]

 Score =  162 bits (409), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 86/131 (65%), Positives = 105/131 (80%)

Query: 1   MAYEIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLF 60
           MAYEI E KKIG GL+GFGI F+FL +ILFFDRGLLALGNI +LTGV LLLG QS W+LF
Sbjct: 1   MAYEISEIKKIGIGLVGFGILFSFLGVILFFDRGLLALGNIFFLTGVGLLLGWQSMWQLF 60

Query: 61  TNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWII 120
           T +AN KGS+ F  GLF LFVRWP+ GII+E+YG   LFSG+ P ++ FLYQIP++GWI+
Sbjct: 61  TKKANLKGSVPFFFGLFLLFVRWPVAGIIMELYGSFVLFSGYGPPIQAFLYQIPIIGWIL 120

Query: 121 QYPLMVLDRLK 131
           QYP  +  +L+
Sbjct: 121 QYPFQLFGQLR 131

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388520013|gb|AFK48068.1| unknown [Lotus japonicus]

 Score =  161 bits (407), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 95/122 (77%), Positives = 106/122 (86%)

Query: 1   MAYEIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLF 60
           MA++IDE KKIG GLIGFGIFFTFL I+LFFDRGLLALGNI WL GV +LLG +S W +F
Sbjct: 1   MAFDIDEIKKIGIGLIGFGIFFTFLGILLFFDRGLLALGNIFWLAGVAILLGWRSMWGIF 60

Query: 61  TNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWII 120
           TNRANYKGS  FLLGLFF+FVRWPIVGIILEIYG + LFS FW S+KVFLY IPVVGWII
Sbjct: 61  TNRANYKGSASFLLGLFFIFVRWPIVGIILEIYGCVFLFSDFWSSIKVFLYHIPVVGWII 120

Query: 121 QY 122
           ++
Sbjct: 121 RF 122

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	133
TAIR|locus:504956158	135	AT1G05785 "AT1G05785" [Arabido	1.0	0.985	0.548	7.4e-34
TAIR|locus:2114638	140	AT3G49420 "AT3G49420" [Arabido	0.992	0.942	0.410	3.6e-25
TAIR|locus:2179167	140	AT5G01430 "AT5G01430" [Arabido	0.992	0.942	0.410	3.6e-25
TAIR|locus:2097745	140	AT3G03180 "AT3G03180" [Arabido	0.759	0.721	0.446	1.1e-21
ZFIN|ZDB-GENE-041210-157	138	golt1ba "golgi transport 1Ba"	0.706	0.681	0.382	2e-15
FB|FBgn0052576	140	CG32576 [Drosophila melanogast	0.759	0.721	0.378	2.3e-14
MGI|MGI:1914214	138	Golt1b "golgi transport 1 homo	0.691	0.666	0.369	2.3e-14
DICTYBASE|DDB_G0292868	138	golt1 "golgi transport protein	0.706	0.681	0.389	3e-14
UNIPROTKB|Q2YDE3	138	GOLT1B "Vesicle transport prot	0.691	0.666	0.358	4.9e-14
UNIPROTKB|F5H6U7	128	GOLT1B "Vesicle transport prot	0.691	0.718	0.358	4.9e-14

TAIR|locus:504956158 AT1G05785 "AT1G05785" [Arabidopsis thaliana (taxid:3702)]

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 73/133 (54%), Positives = 85/133 (63%)

Query:     1 MAYEIDERKKXXXXXXXXXXXXXXXXXXXXXDRGLLALGNIXXXXXXXXXXXXQSTWKLF 60
             M YEI E+KK                     DRGLLALGN+            QSTW++F
Sbjct:     1 MVYEITEQKKVGLGLIGFGLSFTFLGVILYFDRGLLALGNLFWLIGVGLLLGWQSTWRVF 60

Query:    61 TNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWII 120
             TN  N +G+ICF+LGLF +FVRWPI+GIILEIYG I LF GFW +VK FL QIP VGWII
Sbjct:    61 TNVNNLRGTICFVLGLFLIFVRWPIIGIILEIYGVIVLFGGFWSTVKAFLSQIPFVGWII 120

Query:   121 QYPLMVLDRLKGG 133
             QYPLMVL++L  G
Sbjct:   121 QYPLMVLEQLVRG 133

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0016192 "vesicle-mediated transport" evidence=IEA;ISS

TAIR|locus:2114638 AT3G49420 "AT3G49420" [Arabidopsis thaliana (taxid:3702)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 55/134 (41%), Positives = 78/134 (58%)

Query:     1 MAYEIDERKKXXXXXXXXXXXXXXXXXXXXXDRGLLALGNIXXXXXXXXXXXXQSTWKLF 60
             M++E+++RKK                     D+GLLA+GNI            +ST + F
Sbjct:     2 MSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQFF 61

Query:    61 TNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWII 120
               R NYKG+I F +G FF+ + WPI+G++LE YGF  LFSGFWP++ VF  +IPV+GWII
Sbjct:    62 MKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWII 121

Query:   121 QYPLM--VLDRLKG 132
             Q P +    D+ +G
Sbjct:   122 QQPYIRSFFDKYRG 135

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0016192 "vesicle-mediated transport" evidence=IEA;ISS

TAIR|locus:2179167 AT5G01430 "AT5G01430" [Arabidopsis thaliana (taxid:3702)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 55/134 (41%), Positives = 78/134 (58%)

Query:     1 MAYEIDERKKXXXXXXXXXXXXXXXXXXXXXDRGLLALGNIXXXXXXXXXXXXQSTWKLF 60
             M++E+++RKK                     D+GLLA+GNI            +ST + F
Sbjct:     2 MSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQFF 61

Query:    61 TNRANYKGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWII 120
               R NYKG+I F +G FF+ + WPI+G++LE YGF  LFSGFWP++ VF  +IPV+GWII
Sbjct:    62 MKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWII 121

Query:   121 QYPLM--VLDRLKG 132
             Q P +    D+ +G
Sbjct:   122 QQPYIRSFFDKYRG 135

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0016192 "vesicle-mediated transport" evidence=IEA;ISS

TAIR|locus:2097745 AT3G03180 "AT3G03180" [Arabidopsis thaliana (taxid:3702)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 46/103 (44%), Positives = 66/103 (64%)

Query:    32 DRGLLALGNIXXXXXXXXXXXXQSTWKLFTNRANYKGSICFLLGLFFLFVRWPIVGIILE 91
             D+GL+A+GNI                + FT R N+KG+I F LG   +   WPI G++LE
Sbjct:    33 DKGLIAMGNILFLAGVTLTIGINPAIQFFTKRQNFKGTISFGLGFLLVVFGWPIFGLLLE 92

Query:    92 IYGFIALFSGFWPSVKVFLYQIPVVGWIIQYPLM--VLDRLKG 132
              YGF+ LFSGFWP++ VFL +IP++GW++Q P +  +LDR +G
Sbjct:    93 SYGFLVLFSGFWPTLAVFLQRIPLLGWLLQQPYIRSLLDRYRG 135

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0016192 "vesicle-mediated transport" evidence=IEA;ISS

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

ZFIN|ZDB-GENE-041210-157 golt1ba "golgi transport 1Ba" [Danio rerio (taxid:7955)]

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 36/94 (38%), Positives = 56/94 (59%)

Query:    32 DRGLLALGNIXXXXXXXXXXXXQSTWKLFTNRANYKGSICFLLGLFFLFVRWPIVGIILE 91
             D+ LLA+GNI            + T++ F  +   K +  FL G+F + + WPIVG++LE
Sbjct:    31 DKALLAIGNILFVVGLAFVIGLERTFRFFFQKHKMKATSFFLGGVFVVLIGWPIVGVVLE 90

Query:    92 IYGFIALFSGFWPSVKVFLYQIPVVGWIIQYPLM 125
              YGF  LF GF+P V  F+ +IPV+G+++  P +
Sbjct:    91 FYGFFLLFRGFFPVVVGFIRRIPVLGYLLNLPFI 124

GO:0016192 "vesicle-mediated transport" evidence=IEA

FB|FBgn0052576 CG32576 [Drosophila melanogaster (taxid:7227)]

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 39/103 (37%), Positives = 59/103 (57%)

Query:    32 DRGLLALGNIXXXXXXXXXXXXQSTWKLFTNRANYKGSICFLLGLFFLFVRWPIVGIILE 91
             D+GLLA+GNI            + T + F  R   KG+  FL G+  + + +PI G+I+E
Sbjct:    31 DKGLLAIGNILFISGLACVIGVERTMRFFFQRHKVKGTTAFLGGIVIVLLGFPIFGMIIE 90

Query:    92 IYGFIALFSGFWPSVKVFLYQIPVVGWIIQYPLM--VLDRLKG 132
              YGF ALFSGF+P    FL ++PV+G +   P +  ++ +L G
Sbjct:    91 SYGFFALFSGFFPVAINFLGRVPVLGSLFNLPFIQKIVQKLGG 133

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0016192 "vesicle-mediated transport" evidence=IEA

MGI|MGI:1914214 Golt1b "golgi transport 1 homolog B (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 34/92 (36%), Positives = 54/92 (58%)

Query:    32 DRGLLALGNIXXXXXXXXXXXXQSTWKLFTNRANYKGSICFLLGLFFLFVRWPIVGIILE 91
             D+ LLA+GN+            + T++ F  R   K +  FL G+F + + WP++G+I E
Sbjct:    31 DKALLAIGNVLFVAGLAFVIGLERTFRFFFQRHKVKATGFFLGGVFVVLIGWPLIGMIFE 90

Query:    92 IYGFIALFSGFWPSVKVFLYQIPVVGWIIQYP 123
             IYGF  LF GF+P V  F+ ++PV+G ++  P
Sbjct:    91 IYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLP 122

GO:0004871 "signal transducer activity" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0007165 "signal transduction" evidence=ISO

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=ISO

DICTYBASE|DDB_G0292868 golt1 "golgi transport protein 1" [Dictyostelium discoideum (taxid:44689)]

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 37/95 (38%), Positives = 54/95 (56%)

Query:    32 DRGLLALGNIXXXXXXXXXXXXQSTWKLFTNRANYKGSICFLLGLFFLFV-RWPIVGIIL 90
             DR LLALGN+            Q T K F  +   KG+I F  G+  L V RW  VG+++
Sbjct:    29 DRNLLALGNLLLVSGIVLILGLQKTTKFFAQKKKIKGTILFFFGIVVLLVTRWTFVGMVI 88

Query:    91 EIYGFIALFSGFWPSVKVFLYQIPVVGWIIQYPLM 125
             EI+GF+ LF   +P V   L ++P++G I+ +PL+
Sbjct:    89 EIFGFVNLFGDAFPIVISILRKLPIIGNILNHPLV 123

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

UNIPROTKB|Q2YDE3 GOLT1B "Vesicle transport protein GOT1B" [Bos taurus (taxid:9913)]

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 33/92 (35%), Positives = 54/92 (58%)

Query:    32 DRGLLALGNIXXXXXXXXXXXXQSTWKLFTNRANYKGSICFLLGLFFLFVRWPIVGIILE 91
             D+ LLA+GN+            + T++ F  +   K +  FL G+F + + WP++G+I E
Sbjct:    31 DKALLAIGNVLFVAGLAFVIGLERTFRFFFQKHKMKATGFFLGGVFVVLIGWPLIGMIFE 90

Query:    92 IYGFIALFSGFWPSVKVFLYQIPVVGWIIQYP 123
             IYGF  LF GF+P V  F+ ++PV+G ++  P
Sbjct:    91 IYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLP 122

GO:0000139 "Golgi membrane" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

UNIPROTKB|F5H6U7 GOLT1B "Vesicle transport protein GOT1B" [Homo sapiens (taxid:9606)]

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 33/92 (35%), Positives = 54/92 (58%)

Query:    32 DRGLLALGNIXXXXXXXXXXXXQSTWKLFTNRANYKGSICFLLGLFFLFVRWPIVGIILE 91
             D+ LLA+GN+            + T++ F  +   K +  FL G+F + + WP++G+I E
Sbjct:    31 DKALLAIGNVLFVAGLAFVIGLERTFRFFFQKHKMKATGFFLGGVFVVLIGWPLIGMIFE 90

Query:    92 IYGFIALFSGFWPSVKVFLYQIPVVGWIIQYP 123
             IYGF  LF GF+P V  F+ ++PV+G ++  P
Sbjct:    91 IYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLP 122

GO:0016192 "vesicle-mediated transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9USJ2	GOT1_SCHPO	No assigned EC number	0.3418	0.8796	0.9069	yes	no
Q2NKV8	GOT1A_BOVIN	No assigned EC number	0.4462	0.8872	0.8939	yes	no
Q6ZVE7	GOT1A_HUMAN	No assigned EC number	0.4529	0.8571	0.8636	yes	no
Q54CL4	GOT1_DICDI	No assigned EC number	0.45	0.8947	0.8623	yes	no
Q20263	GOT1_CAEEL	No assigned EC number	0.4135	0.9849	0.9290	yes	no
Q9DCQ3	GOT1A_MOUSE	No assigned EC number	0.4628	0.8872	0.8872	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0012017201 hypothetical protein (135 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	133
COG5120	129	COG5120, GOT1, Membrane protein involved in Golgi	7e-17
pfam04178	116	pfam04178, Got1, Got1/Sft2-like family	4e-12

>gnl|CDD|227450 COG5120, GOT1, Membrane protein involved in Golgi transport [Intracellular trafficking and secretion]

 Score = 71.0 bits (174), Expect = 7e-17
 Identities = 43/123 (34%), Positives = 65/123 (52%)

Query: 7   ERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLFTNRANY 66
             +K G  +   G  F  + I LFFDR LL LGN+L + G+ L+ G + +   F      
Sbjct: 5   NLQKSGVVVTSIGFLFFLVGIFLFFDRALLILGNLLMIIGIFLIAGSRKSMFFFLRPEKI 64

Query: 67  KGSICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWIIQYPLMV 126
           +GS+ F +G+  L  R+P+ G +LE  G   LF  F P+++ FL  +P++G  I   L  
Sbjct: 65  QGSVIFAMGVLLLLYRFPMFGFLLETLGLFLLFRDFIPTIRTFLRTLPLIGPYIDRLLGR 124

Query: 127 LDR 129
           L R
Sbjct: 125 LMR 127

Length = 129

>gnl|CDD|217941 pfam04178, Got1, Got1/Sft2-like family

 Score = 58.3 bits (142), Expect = 4e-12
 Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 5/95 (5%)

Query: 10  KIGFGLIGFGIFFTFLAIILFF-DRGLLALGNILWLTGVTLLLGLQSTWKLFTNRANYKG 68
           KIG    G G FF FL ++L F    LL LGNIL+L     L+G +   K   ++     
Sbjct: 1   KIGVLFFGLGFFFLFLPVLLLFPFALLLTLGNILFLGSTGFLIGPKKQLKFMFSKERLPA 60

Query: 69  SICFLLGLFFLFVRWPIVGIILEIYGFIALFSGFW 103
           +I F + L           +IL+ YG   LFS F 
Sbjct: 61  TIVFFVSLVLTLY----FALILKSYGLTLLFSIFQ 91

Traffic through the yeast Golgi complex depends on a member of the syntaxin family of SNARE proteins, Sed5, present in early Golgi cisternae. Got1 is thought to facilitate Sed5-dependent fusion events. This is a family of sequences derived from eukaryotic proteins. They are similar to a region of a SNARE-like protein required for traffic through the Golgi complex, SFT2 protein. This is a conserved protein with four putative transmembrane helices, thought to be involved in vesicular transport in later Golgi compartments. Length = 116

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	133
KOG1743	137	consensus Ferric reductase-like proteins [Inorgani	100.0
COG5120	129	GOT1 Membrane protein involved in Golgi transport	100.0
PF04178	118	Got1: Got1/Sft2-like family ; InterPro: IPR007305	99.7
KOG2887	175	consensus Membrane protein involved in ER to Golgi	96.84

>KOG1743 consensus Ferric reductase-like proteins [Inorganic ion transport and metabolism]

Probab=100.00  E-value=5.9e-53  Score=320.46  Aligned_cols=131  Identities=51%  Similarity=1.057  Sum_probs=129.1

Q ss_pred             eeccccchhhhhhhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhHHHhchhhhhhhhhcccccchhhhhHhHHHHHHhh
Q 032807            3 YEIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLFTNRANYKGSICFLLGLFFLFVR   82 (133)
Q Consensus         3 ~~~~d~qkiGvgl~~~G~~f~~lGv~lffDr~lLalGNiLfl~Gl~l~iG~~kt~~FF~~~~k~kGti~F~~Gi~lvl~~   82 (133)
                      ||+||.||||+++|++|++|+++|++++|||+|||+||+||++|++++||.|||.+||+||||.|||+.|+.|+++|++|
T Consensus         1 ~~l~d~kkiGvg~TgfG~ff~l~Gii~ffD~aLLa~GNlLfi~GvsliiG~~~t~~FF~r~~k~kGti~F~~G~l~vl~~   80 (137)
T KOG1743|consen    1 MELNDLKKIGVGLTGFGVFFFLFGIILFFDKALLAMGNLLFIIGVSLIIGFRKTMQFFFRRQKMKGTISFLGGVLLVLFG   80 (137)
T ss_pred             CccchhhHhCeEEechhHHHHHHHHHHHHhhHHHHhcchHHHHhHHHhhcchhhhhhheehhhcceeeehhhhHHHHHHh
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHhhhcchHHHHHHhhcCCcccccccccH--HHHhhhhCC
Q 032807           83 WPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVGWIIQYPL--MVLDRLKGG  133 (133)
Q Consensus        83 ~p~iG~i~E~~G~~~LF~~F~P~~~~fLr~~P~ig~il~~P~--~~~~~l~g~  133 (133)
                      ||++||++|+||+++||++|+|++++|+|++|++||++|+|+  +.+||+++.
T Consensus        81 wPi~Gm~lE~~Gff~LF~gF~P~i~~flrs~p~lG~i~~~p~i~~~~drl~~~  133 (137)
T KOG1743|consen   81 WPIFGMILETYGFFVLFRGFFPVIVVFLRSIPVLGWILNLPGIRSFLDRLAGP  133 (137)
T ss_pred             hHHHHHHHHHHHHHHHHhhhhHHHHHHHHcCccccccccCccHHHHHHHhcCC
Confidence            999999999999999999999999999999999999999999  999999863

>COG5120 GOT1 Membrane protein involved in Golgi transport [Intracellular trafficking and secretion]

Probab=100.00  E-value=7.4e-40  Score=245.51  Aligned_cols=115  Identities=34%  Similarity=0.731  Sum_probs=114.4

Q ss_pred             eeccccchhhhhhhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhHHHhchhhhhhhhhcccccchhhhhHhHHHHHHhh
Q 032807            3 YEIDERKKIGFGLIGFGIFFTFLAIILFFDRGLLALGNILWLTGVTLLLGLQSTWKLFTNRANYKGSICFLLGLFFLFVR   82 (133)
Q Consensus         3 ~~~~d~qkiGvgl~~~G~~f~~lGv~lffDr~lLalGNiLfl~Gl~l~iG~~kt~~FF~~~~k~kGti~F~~Gi~lvl~~   82 (133)
                      ||++|.||+|++.|+.|..|+..|+.+||||+++++||+|+++|+.+++|.||+..||.||+|++||+.|+.|.+++++|
T Consensus         1 mwl~~lqk~GV~~t~~Gflffl~Gif~ffDraLl~lGNlL~iiG~fliags~ks~~fflRp~k~~Gsv~F~~G~ll~l~~   80 (129)
T COG5120           1 MWLMNLQKSGVVVTSIGFLFFLVGIFLFFDRALLILGNLLMIIGIFLIAGSRKSMFFFLRPEKIQGSVIFAMGVLLLLYR   80 (129)
T ss_pred             CchhhhhHcCeEEeehhHHHHHHHHHHHhhhHHHHhcCHHHHHHHHHHhcccceEEEEEchhHhhhhHHHHHHHHHHHHH
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHhhhcchHHHHHHhhcCCccc
Q 032807           83 WPIVGIILEIYGFIALFSGFWPSVKVFLYQIPVVG  117 (133)
Q Consensus        83 ~p~iG~i~E~~G~~~LF~~F~P~~~~fLr~~P~ig  117 (133)
                      ||++|+++|+.|+++||++|+|++.+|||.+|++|
T Consensus        81 fp~~GF~~E~LG~f~Lf~df~p~i~~fLRt~p~ig  115 (129)
T COG5120          81 FPMFGFLLETLGLFLLFRDFIPTIRTFLRTLPLIG  115 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            99999999999999999999999999999999999

>PF04178 Got1: Got1/Sft2-like family ; InterPro: IPR007305 Traffic through the yeast Golgi complex depends on a member of the syntaxin family of SNARE proteins, Sed5, present in early Golgi cisternae

Probab=99.70  E-value=8.2e-17  Score=118.63  Aligned_cols=102  Identities=32%  Similarity=0.605  Sum_probs=97.8

Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHhHHHhchhhhhhhhhcccccchhhhhHhHHHHHHhhhhHH
Q 032807           10 KIGFGLIGFGIFFTFLAIILFFDR---GLLALGNILWLTGVTLLLGLQSTWKLFTNRANYKGSICFLLGLFFLFVRWPIV   86 (133)
Q Consensus        10 kiGvgl~~~G~~f~~lGv~lffDr---~lLalGNiLfl~Gl~l~iG~~kt~~FF~~~~k~kGti~F~~Gi~lvl~~~p~i   86 (133)
                      |+|+.++..|.++.++|++++.||   .+.++||+++++|..+++||+|..+++.+|+|+++|++|+.+++++++    .
T Consensus         1 ~~G~~~~~l~~~~~~~~~~~~~~~kFa~l~tlGnil~l~s~~fL~Gp~~q~k~m~~~~R~~~t~~y~~~l~~tl~----~   76 (118)
T PF04178_consen    1 KIGIICFFLSLIFFFLGVLLFFPRKFAILYTLGNILFLASTFFLIGPKKQFKFMFSPKRLIATIIYFISLILTLY----F   76 (118)
T ss_pred             CeehHHHHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHH----H
Confidence            789999999999999999999999   999999999999999999999999999999999999999999999998    9


Q ss_pred             HHHHHHHHHHHhhhcch-HHHHHHhhcC-Cc
Q 032807           87 GIILEIYGFIALFSGFW-PSVKVFLYQI-PV  115 (133)
Q Consensus        87 G~i~E~~G~~~LF~~F~-P~~~~fLr~~-P~  115 (133)
                      |+..|.|++.++|+.+. |..+.|+.+. |.
T Consensus        77 ~~~~~~~~l~llf~~~q~~al~wy~~s~iP~  107 (118)
T PF04178_consen   77 AFILKSYGLTLLFSIFQFPALIWYLLSYIPF  107 (118)
T ss_pred             HHHHhhHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            99999999999999988 9999888875 84

Got1 is thought to facilitate Sed5-dependent fusion events []. This is a family of sequences derived from eukaryotic proteins. They are similar to a region of a SNARE-like protein required for traffic through the Golgi complex, SFT2 protein (P38166 from SWISSPROT) []. This is a conserved protein with four putative transmembrane helices, thought to be involved in vesicular transport in later Golgi compartments []. ; GO: 0016192 vesicle-mediated transport

>KOG2887 consensus Membrane protein involved in ER to Golgi transport [Intracellular trafficking, secretion, and vesicular transport]

Probab=96.84  E-value=0.011  Score=47.56  Aligned_cols=98  Identities=19%  Similarity=0.261  Sum_probs=80.0

Q ss_pred             hhhhHHHHHHHHHHHHHHhhH--------HHHHHHHHHHHHhHHHhchhhhhhhhhcccccchhhhhHhHHHHHHhh---
Q 032807           14 GLIGFGIFFTFLAIILFFDRG--------LLALGNILWLTGVTLLLGLQSTWKLFTNRANYKGSICFLLGLFFLFVR---   82 (133)
Q Consensus        14 gl~~~G~~f~~lGv~lffDr~--------lLalGNiLfl~Gl~l~iG~~kt~~FF~~~~k~kGti~F~~Gi~lvl~~---   82 (133)
                      ...+.|+++.+++.+++.--.        +-++||++++.+-..++||++=++--+.|+|+-.|+.|+.=.++-++-   
T Consensus        51 ~cl~~gv~c~~l~~~lf~v~~~~~~kFal~~TlGnll~i~sf~fLmGP~~ql~~m~~p~Rl~~T~~~l~~~~~Tly~al~  130 (175)
T KOG2887|consen   51 ICLAGGVLCFLLAMVLFPVLVVSPRKFALLYTLGNLLAIGSFAFLMGPVSQLKHMFSPERLPATLSYLATMVLTLYVALW  130 (175)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccccceeehhHHHHHHHHHHHHHHHHhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH
Confidence            456788999999999998655        678999999999999999999999999999999999999888775542   


Q ss_pred             -----hhHHHHHHHHHHHHHhhhcchHHHHHHhh
Q 032807           83 -----WPIVGIILEIYGFIALFSGFWPSVKVFLY  111 (133)
Q Consensus        83 -----~p~iG~i~E~~G~~~LF~~F~P~~~~fLr  111 (133)
                           -.++=-++|...+.+--=+++|-.-+-++
T Consensus       131 ~ks~iLtllf~ilq~laliwYslSyiP~g~~gv~  164 (175)
T KOG2887|consen  131 LKSKILTLLFCILQVLALIWYSLSYIPFGRSGVS  164 (175)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHH
Confidence                 26667778888887777777776555443

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00