Citrus Sinensis ID: 032850

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130--
Protein Sequence
MTAVSNSLVLPKNPRVELSSGSFLKPLDLCLGSNTPANLSFSPNHQWKVQLSSSRRRPFKVHASNSEGGRANSAGFFVGGFVLGGIIVGTLGCVYAPQISKALAGAAADRKDLMRKLPKFIYDEEKALENLR
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccEEEEEEcccccccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccEccccccEEEcccccccccccEEEEccccccEEccccccEEEEEcccccEEEEEEEEccccccccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccHHHHHHHcc
Coil and Loop (DISEMBL)
mtavsnslvlpknprvelssgsflkpldlclgsntpanlsfspnhqwkvqlsssrrrpfkvhasnseggransagffVGGFVLGGIIVGTLGCVYAPQISKALAGAAADRKDLMRKLPKFIYDEEKALENLR
Flexible Loop (DISEMBL)
mtavsnslvlpknprveLSSGSFLKPLDLCLGSNtpanlsfspnHQWKVQLSSSRRRPFKVhasnseggranSAGFFVGGFVLGGIIVGTLGCVYAPQISKALAGAAADRKDLMRKLPKFIYdeekalenlr
Low Complexity Region (SEG)
MTAVSNSLVLPKNPRVELSSGSFLKPLDLCLGSNTPANLSFSPNHQWKVQLSSSRRRPFKVHASNSEGGRANSAgffvggfvlggiivgtlgCVYAPQISKALAGAAADRKDLMRKLPKFIYDEEKALENLR
Disordered region (IsUnstruct)
**********************FLKPLDLCLG*****************************************AGFFVGGFVLGGIIVGTLGCVYAPQISKALAGAAADRKDLMRKLPKFIY**********
Disordered Region (DISOPRED)
*****************************************************************************VGGFVLGGIIVGTLGCVYAPQISKALA***A*****MRKLPKFIYDEEKAL****
Disordered Region (DISEMBL)
MTAVSNSLVLPKNPRVELSSGSFLKPLDLCLGSNTPANLSFSPNHQWKVQLSSSRRRPFKVHASNSEGGRANSAGFFVGGFVLGGIIVGTLGCVYAPQISKALAGAAADRKDLMRKLPKFIYDEEKALENLR
Disordered Region (DISPRO)
******SLVLPKNPRVELSSGSFLKPLDLCLGSNTPANLSFSPNHQWKVQLSSSRRRPFKVHASNSEGGRANSAGFFVGGFVLGGIIVGTLGCVYAPQISKALAGAAADRKDLMRKLPKFIYDEEKAL****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTAVSNSLVLPKNPRVELSSGSFLKPLDLCLGSNTPANLSFSPNHQWKVQLSSSRRRPFKVHASNSEGGRANSAGFFVGGFVLGGIIVGTLGCVYAPQISKALAGAAADRKDLMRKLPKFIYDEEKALENLR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	132
225457608	171	PREDICTED: uncharacterized protein LOC10	0.931	0.719	0.643	1e-36
449455633	169	PREDICTED: uncharacterized protein LOC10	0.969	0.757	0.598	2e-34
255539284	166	conserved hypothetical protein [Ricinus	0.939	0.746	0.634	2e-33
351725087	163	uncharacterized protein LOC100306344 [Gl	0.833	0.674	0.619	7e-30
224094252	164	predicted protein [Populus trichocarpa]	0.924	0.743	0.556	2e-29
388518649	165	unknown [Lotus japonicus]	0.909	0.727	0.576	4e-28
356517227	163	PREDICTED: uncharacterized protein LOC10	0.924	0.748	0.537	8e-28
225438434	162	PREDICTED: uncharacterized protein LOC10	0.893	0.728	0.555	9e-28
255633142	228	unknown [Glycine max]	0.924	0.535	0.537	2e-27
388514427	139	unknown [Lotus japonicus]	0.712	0.676	0.680	2e-27

>gi|225457608|ref|XP_002273917.1| PREDICTED: uncharacterized protein LOC100242710 [Vitis vinifera] gi|297745580|emb|CBI40745.3| unnamed protein product [Vitis vinifera]

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 85/132 (64%), Positives = 97/132 (73%), Gaps = 9/132 (6%)

Query: 1   MTAVSNSLVLPKNPRVELSSGSFLKPLDLCLGSNTPANLSFSPNHQWKVQLSSSRRRPFK 60
           M A SNSLV         SSG+ LKP+D  LGS  P NLSF+PNH  KVQ  +S+R    
Sbjct: 1   MAAFSNSLV-------HFSSGACLKPVDRYLGSLGPTNLSFNPNHVGKVQFFTSKRALTV 53

Query: 61  VHASNSEGGRANSAGFFVGGFVLGGIIVGTLGCVYAPQISKALAGAAADRKDLMRKLPKF 120
             A + +GG+ ++A FF+GGFVLGG+IVGTLGCVYAPQISKALAG  ADRKDLMRKLPKF
Sbjct: 54  QAAYSDDGGKQSNANFFLGGFVLGGLIVGTLGCVYAPQISKALAG--ADRKDLMRKLPKF 111

Query: 121 IYDEEKALENLR 132
           IYDEEKALE  R
Sbjct: 112 IYDEEKALEKTR 123

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455633|ref|XP_004145557.1| PREDICTED: uncharacterized protein LOC101206784 [Cucumis sativus] gi|449485109|ref|XP_004157072.1| PREDICTED: uncharacterized LOC101206784 [Cucumis sativus]

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/132 (59%), Positives = 98/132 (74%), Gaps = 4/132 (3%)

Query: 1   MTAVSNSLVLPKNPRVELSSGSFLKPLDLCLGSNTPANLSFSPNHQWKVQLSSSRRRPFK 60
           M A+SNSLVL K+P+++L+ GS LK +D  LGS +P +L  SP      +LS+SRR    
Sbjct: 1   MAAISNSLVLTKSPQLQLTHGSNLKTVDRRLGSLSPTSLVLSPGWVGNAKLSTSRR-SLS 59

Query: 61  VHASNSEGGRANSAGFFVGGFVLGGIIVGTLGCVYAPQISKALAGAAADRKDLMRKLPKF 120
           V A+  + GR+ S G F+GGFVLGG+IVGTLGCVYAPQISK +AG   DRK+LM+KLPKF
Sbjct: 60  VQAAYRDDGRS-STGIFIGGFVLGGLIVGTLGCVYAPQISKVIAG--TDRKELMKKLPKF 116

Query: 121 IYDEEKALENLR 132
           IYDEEKALE  R
Sbjct: 117 IYDEEKALEKTR 128

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539284|ref|XP_002510707.1| conserved hypothetical protein [Ricinus communis] gi|223551408|gb|EEF52894.1| conserved hypothetical protein [Ricinus communis]

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/134 (63%), Positives = 96/134 (71%), Gaps = 10/134 (7%)

Query: 1   MTAVSNSLVLPKNP--RVELSSGSFLKPLDLCLGSNTPANLSFSPNHQWKVQLSSSRRRP 58
           MTA+SNSL L +NP   V+LS+GS  K L     +  P  LSFS N   KVQL++SRR  
Sbjct: 1   MTAISNSLALTRNPVGTVQLSAGSLGKSLQ----NVGPTKLSFSLNSPGKVQLTTSRR-S 55

Query: 59  FKVHASNSEGGRANSAGFFVGGFVLGGIIVGTLGCVYAPQISKALAGAAADRKDLMRKLP 118
             V A+ S+ GR +S   FVGGFVLGG+IVG LGCVYAPQISKALAG   DRKDLMRKLP
Sbjct: 56  LTVRAA-SDDGRPSSGSIFVGGFVLGGLIVGALGCVYAPQISKALAG--TDRKDLMRKLP 112

Query: 119 KFIYDEEKALENLR 132
           KFIYDEEKALE  R
Sbjct: 113 KFIYDEEKALEKTR 126

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725087|ref|NP_001237336.1| uncharacterized protein LOC100306344 [Glycine max] gi|255628263|gb|ACU14476.1| unknown [Glycine max]

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 3/113 (2%)

Query: 20  SGSFLKPLDLCLGSNTPANLSFSPNHQWKVQLSSSRRRPFKVHASNSEGGRANSAGFFVG 79
           S S +  +D  L    P N S + N Q  +Q +S  RRP  + A+ S+GGR +SA  FVG
Sbjct: 13  SASSINKVDHSLVKIKPYNFSLNLNRQGTMQ-TSLTRRPLTIQATYSDGGRPSSASVFVG 71

Query: 80  GFVLGGIIVGTLGCVYAPQISKALAGAAADRKDLMRKLPKFIYDEEKALENLR 132
           GF+LGG+IVGTLGCVYAPQISKALAG  ADRK+LMRKLPKFIYDEEKALE  R
Sbjct: 72  GFLLGGLIVGTLGCVYAPQISKALAG--ADRKELMRKLPKFIYDEEKALEKTR 122

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224094252|ref|XP_002310110.1| predicted protein [Populus trichocarpa] gi|222853013|gb|EEE90560.1| predicted protein [Populus trichocarpa]

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/133 (55%), Positives = 88/133 (66%), Gaps = 11/133 (8%)

Query: 1   MTAVSNSLVLPKNPRVELSS-GSFLKPLDLCLGSNTPANLSFSPNHQWKVQLSSSRRRPF 59
           MTA+S SL+    P+   SS GS LKP D CL    P NLS            ++ ++  
Sbjct: 1   MTALSTSLLSITTPQAHFSSAGSSLKPKDQCLICVRPGNLSSKGK-------PTTHKKSL 53

Query: 60  KVHASNSEGGRANSAGFFVGGFVLGGIIVGTLGCVYAPQISKALAGAAADRKDLMRKLPK 119
            + AS   GG ++ AG F+GGF+LGG++ GTLGCVYAPQISKALAG  ADRKDLMRKLPK
Sbjct: 54  TIQASGERGG-SSGAGIFIGGFILGGMVAGTLGCVYAPQISKALAG--ADRKDLMRKLPK 110

Query: 120 FIYDEEKALENLR 132
           FIYDEEKALE  R
Sbjct: 111 FIYDEEKALEKTR 123

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388518649|gb|AFK47386.1| unknown [Lotus japonicus]

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/130 (57%), Positives = 89/130 (68%), Gaps = 10/130 (7%)

Query: 3   AVSNSLVLPKNPRVELSSGSFLKPLDLCLGSNTPANLSFSPNHQWKVQLSSSRRRPFKVH 62
           AVS+S +L K       S S +  +D       P+ LS + N Q + QLS +RR P  V 
Sbjct: 4   AVSSSFILTK-------SVSSINKVDHSRVMIKPSGLSQNLNCQGRTQLSLTRR-PLTVQ 55

Query: 63  ASNSEGGRANSAGFFVGGFVLGGIIVGTLGCVYAPQISKALAGAAADRKDLMRKLPKFIY 122
           A+ S+GGR + A  FVGGFVLGG+IVGTLG VYAPQISKALAG  AD+K+LMRKLPKFIY
Sbjct: 56  ATYSDGGRPSGASVFVGGFVLGGLIVGTLGAVYAPQISKALAG--ADKKELMRKLPKFIY 113

Query: 123 DEEKALENLR 132
           DEEKALE  R
Sbjct: 114 DEEKALEKTR 123

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356517227|ref|XP_003527290.1| PREDICTED: uncharacterized protein LOC100527765 [Glycine max]

 Score =  128 bits (321), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 71/132 (53%), Positives = 88/132 (66%), Gaps = 10/132 (7%)

Query: 1   MTAVSNSLVLPKNPRVELSSGSFLKPLDLCLGSNTPANLSFSPNHQWKVQLSSSRRRPFK 60
           M AV ++  L K       S   +  LD  L    P + S + N   +++ +S  RRP  
Sbjct: 1   MAAVPSTFALTK-------SALSINKLDHSLVKIKPYSFSLNLNRLGRME-TSLTRRPLT 52

Query: 61  VHASNSEGGRANSAGFFVGGFVLGGIIVGTLGCVYAPQISKALAGAAADRKDLMRKLPKF 120
           + A+ S+GGR +SA  FVGGF+LGG+IVGTLGCVYAPQISKA+AG  ADRK+LMRKLPKF
Sbjct: 53  IQATYSDGGRPSSASVFVGGFLLGGLIVGTLGCVYAPQISKAIAG--ADRKELMRKLPKF 110

Query: 121 IYDEEKALENLR 132
           IYDEEKALE  R
Sbjct: 111 IYDEEKALEKTR 122

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225438434|ref|XP_002276709.1| PREDICTED: uncharacterized protein LOC100250729 [Vitis vinifera]

 Score =  128 bits (321), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 75/135 (55%), Positives = 86/135 (63%), Gaps = 17/135 (12%)

Query: 1   MTAVSNSLVLPKNPRVELSSGSFLKPLD---LCLGSNTPANLSFSPNHQWKVQLSSSRRR 57
           M+A SN LV  +NPR +   GS LK +D   L L S +  N     N             
Sbjct: 1   MSAFSNPLVSIRNPRTQFLYGSSLKLVDQSNLSLCSTSAGNTKHLANKSL---------- 50

Query: 58  PFKVHASNSEGGRANSAGFFVGGFVLGGIIVGTLGCVYAPQISKALAGAAADRKDLMRKL 117
              + A+  +GGR +SA  FVGGF+LGGI+VGTLGCVYAPQISKALAG  ADRKDLMRKL
Sbjct: 51  -LTIRAAG-DGGRPSSASIFVGGFILGGIVVGTLGCVYAPQISKALAG--ADRKDLMRKL 106

Query: 118 PKFIYDEEKALENLR 132
           PKFIYDEEKALE  R
Sbjct: 107 PKFIYDEEKALEKTR 121

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255633142|gb|ACU16926.1| unknown [Glycine max]

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/132 (53%), Positives = 88/132 (66%), Gaps = 10/132 (7%)

Query: 1   MTAVSNSLVLPKNPRVELSSGSFLKPLDLCLGSNTPANLSFSPNHQWKVQLSSSRRRPFK 60
           M AV ++  L K       S   +  LD  L    P + S + N   +++ S +RR P  
Sbjct: 1   MAAVPSTFALTK-------SALSINKLDHSLVKIRPYSFSLNLNRLGRMETSLTRR-PLT 52

Query: 61  VHASNSEGGRANSAGFFVGGFVLGGIIVGTLGCVYAPQISKALAGAAADRKDLMRKLPKF 120
           + A+ S+GGR +SA  FVGGF+LGG+IVGTLGCVYAPQISKA+AG  ADRK+LMRKLPKF
Sbjct: 53  IQATYSDGGRPSSASVFVGGFLLGGLIVGTLGCVYAPQISKAIAG--ADRKELMRKLPKF 110

Query: 121 IYDEEKALENLR 132
           IYDEEKALE  R
Sbjct: 111 IYDEEKALEKTR 122

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388514427|gb|AFK45275.1| unknown [Lotus japonicus]

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/97 (68%), Positives = 76/97 (78%), Gaps = 3/97 (3%)

Query: 36  PANLSFSPNHQWKVQLSSSRRRPFKVHASNSEGGRANSAGFFVGGFVLGGIIVGTLGCVY 95
           P+ LS + N Q + QLS +RR P  V A+ S+GGR + A  FVGGFVLGG+IVGTLG VY
Sbjct: 4   PSGLSQNLNCQGRTQLSLTRR-PLTVQATYSDGGRPSGASVFVGGFVLGGLIVGTLGAVY 62

Query: 96  APQISKALAGAAADRKDLMRKLPKFIYDEEKALENLR 132
           APQISKALAG  AD+K+LMRKLPKFIYDEEKALE  R
Sbjct: 63  APQISKALAG--ADKKELMRKLPKFIYDEEKALEKTR 97

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	132
TAIR|locus:2009859	168	AT1G42960 "AT1G42960" [Arabido	0.909	0.714	0.438	1.6e-17

TAIR|locus:2009859 AT1G42960 "AT1G42960" [Arabidopsis thaliana (taxid:3702)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 57/130 (43%), Positives = 72/130 (55%)

Query:     5 SNSLVLPKNP-RVELSSGSFLKPLDLCLGSNTPANLSFSPNHQWKVQLSSSR-RRPFKVH 62
             S SL LPKN  ++  SSG  L P   C+      ++SF  NH  K+ +S+ R +R   + 
Sbjct:     6 STSLSLPKNSHQLHPSSGFSLNPNARCV------SVSFGLNHSNKLHISAPRTKRILTIQ 59

Query:    63 ASNSEGGRANSAXXXXXXXXXXXXXXXXXXCVYAPQISKALAGAAADRKDLMRKLPKFIY 122
             ++  +   + S                   CVYAPQISKA+AGA  DRKDLMRKLPKFIY
Sbjct:    60 SAYRDDDGSGSTGLFVGGFILGGLIVGALGCVYAPQISKAIAGA--DRKDLMRKLPKFIY 117

Query:   123 DEEKALENLR 132
             DEEKALE  R
Sbjct:   118 DEEKALEKTR 127


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.128   0.368    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      132       114   0.00091  102 3  11 23  0.36    31
                                                     29  0.44    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  559 (59 KB)
  Total size of DFA:  115 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.65u 0.12s 9.77t   Elapsed:  00:00:00
  Total cpu time:  9.65u 0.12s 9.77t   Elapsed:  00:00:00
  Start:  Fri May 10 05:52:45 2013   End:  Fri May 10 05:52:45 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00002910001 SubName- Full=Chromosome chr18 scaffold_137, whole genome shotgun sequence; (171 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	132
PF12732	74	YtxH: YtxH-like protein; InterPro: IPR024623 This	97.45
COG4980	115	GvpP Gas vesicle protein [General function predict	96.56
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	84.47

>PF12732 YtxH: YtxH-like protein; InterPro: IPR024623 This family of uncharacterised proteins is found in bacteria

Probab=97.45  E-value=6.1e-05  Score=50.75  Aligned_cols=27  Identities=30%  Similarity=0.552  Sum_probs=24.3

Q ss_pred             chhhhhhhhhhhhhhhhhhhhhhHHHh
Q 032850           77 FVGGFVLGGIIVGTLGCVYAPQISKAL  103 (132)
Q Consensus        77 FlaGfllGG~V~G~LG~vfAPQIskaL  103 (132)
                      |+.||++|++++.++|++|||+--+-+
T Consensus         1 F~~g~l~Ga~~Ga~~glL~aP~sG~e~   27 (74)
T PF12732_consen    1 FLLGFLAGAAAGAAAGLLFAPKSGKET   27 (74)
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCCcHHH
Confidence            899999999999999999999865544

Proteins in this family are typically between 100 and 143 amino acids in length. The N-terminal region is the most conserved.

>COG4980 GvpP Gas vesicle protein [General function prediction only]

Probab=96.56  E-value=0.0015  Score=49.45  Aligned_cols=32  Identities=31%  Similarity=0.534  Sum_probs=29.3

Q ss_pred             CcccchhhhhhhhhhhhhhhhhhhhhhHHHhh
Q 032850           73 SAGFFVGGFVLGGIIVGTLGCVYAPQISKALA  104 (132)
Q Consensus        73 ~~G~FlaGfllGG~V~G~LG~vfAPQIskaL~  104 (132)
                      .+++||.|.++||+|+.+.+-+|||+-.|-+.
T Consensus         3 ~~~~~l~G~liGgiiGa~aaLL~AP~sGkelR   34 (115)
T COG4980           3 KGKDFLFGILIGGIIGAAAALLFAPKSGKELR   34 (115)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHhCCcccHHHH
Confidence            46899999999999999999999999888775

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=84.47  E-value=0.62  Score=38.45  Aligned_cols=28  Identities=32%  Similarity=0.462  Sum_probs=24.2

Q ss_pred             cchhhhhhhhhhhhhhhhhhhhhhHHHh
Q 032850           76 FFVGGFVLGGIIVGTLGCVYAPQISKAL  103 (132)
Q Consensus        76 ~FlaGfllGG~V~G~LG~vfAPQIskaL  103 (132)
                      |++.||++||.++.++|+++--.+.+..
T Consensus         9 g~~~G~~~~g~~Ga~~G~~~Gh~~d~~~   36 (267)
T PRK09430          9 GFAFGFLFGGFFGALLGLLIGHMFDKAR   36 (267)
T ss_pred             HHHHHHHHhhHHHHHHHHHHHhHHhhhh
Confidence            6788999999999999999988888754

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00