Citrus Sinensis ID: 032866

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-
Protein Sequence
MDREDGGGGGGGGPTATPRPRKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVVINLEHVKAIVTAKEVFDALSYQPSGCSVRSGFAASHFFSSSFVHTTGRAER
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccEEEEEEcccccEEEEEEcHHHHHHHHcccccccccccccccccccccccccEEEEEcccEEEEEEccEEEEEcccccccHHHHHHHHHHccccccEEcccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccEEEEEEccccccEEEEccHHHHHHHccccHHHHHHcccccccccHEEccccEEEEEHHHEEEEEEHHHEEccccccccHHHHHHHHHHHHccccccccccccccc
Coil and Loop (DISEMBL)
mdredggggggggptatprprkgmglRTWLVVSESGQSRVEEVGKHVImrrtglpardlrvldpllsypssilGRELAVVINLEHVKAIVTAKEVFDalsyqpsgcsvrsgfaashffsssfvhttgraer
Flexible Loop (DISEMBL)
mdredggggggggptatprprkgmgLRTWLVVsesgqsrveevgkhvimrrtglpardlrvlDPLLSYPSSILGRELAVVINLEHVKAIVTAKEVFDALSYQPSGCSVRSGFAASHFfsssfvhttgraer
Low Complexity Region (SEG)
MDREDggggggggPTATPRPRKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVVINLEHVKAIVTAKEVFDALSYQPSGCSVRsgfaashffsssfvhttgRAER
Disordered region (IsUnstruct)
*************************LRTWLVVS******VEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVVINLEHVKAIVTAKEVFDALSYQPSGCSVRSGFAASHFFSSSFV********
Disordered Region (DISOPRED)
***************************TWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVVINLEHVKAIVTAKEVFDALSYQPSGCSVRSGFA******************
Disordered Region (DISEMBL)
***************ATPRPRKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVVINLEHVKAIVTAKEVFDALSYQPSGCSVRSGFAASHFFSSSF*********
Disordered Region (DISPRO)
************************GLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVVINLEHVKAIVTAKEVFDALSYQPSGCSVRSGFAASHFF*************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDREDGGGGGGGGPTATPRPRKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVVINLEHVKAIVTAKEVFDALSYQPSGCSVRSGFAASHFFSSSFVHTTGRAER
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	131	2.2.26 [Sep-21-2011]
Q8L4S2	444	Magnesium transporter MRS	yes	no	0.725	0.213	0.631	1e-26
A2WY50	444	Magnesium transporter MRS	N/A	no	0.725	0.213	0.631	1e-26
Q9LJN2	484	Magnesium transporter MRS	yes	no	0.587	0.159	0.714	5e-26
Q9S9N4	442	Magnesium transporter MRS	no	no	0.633	0.187	0.510	1e-21
Q9SAH0	443	Magnesium transporter MRS	no	no	0.580	0.171	0.565	4e-20
Q10D38	384	Magnesium transporter MRS	no	no	0.534	0.182	0.585	1e-19
B8AJT9	381	Magnesium transporter MRS	N/A	no	0.534	0.183	0.585	1e-19
Q304A0	386	Magnesium transporter MRS	no	no	0.534	0.181	0.6	2e-19
Q8S1N1	418	Magnesium transporter MRS	no	no	0.580	0.181	0.610	4e-19
A2WXD3	418	Magnesium transporter MRS	N/A	no	0.580	0.181	0.610	4e-19

>sp|Q8L4S2|MRS2F_ORYSJ Magnesium transporter MRS2-F OS=Oryza sativa subsp. japonica GN=MRS2-F PE=1 SV=1

 Score =  118 bits (295), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/95 (63%), Positives = 68/95 (71%)

Query: 27  RTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVVINLEHV 86
           R WLVV  SGQ+RVEE GKH +M RTGLPARDLRVLDPLLSYPS+ILGRE A+V+NLE V
Sbjct: 28  REWLVVPASGQARVEEAGKHAVMARTGLPARDLRVLDPLLSYPSTILGRERAIVVNLERV 87

Query: 87  KAIVTAKEVFDALSYQPSGCSVRSGFAASHFFSSS 121
           KA++TA EV    S  P+  S      A    SSS
Sbjct: 88  KAVITAAEVLLPNSKDPAFASFVCDLQARVLASSS 122

Magnesium transporter that may mediate the influx of magnesium.
Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2WY50|MRS2F_ORYSI Magnesium transporter MRS2-F OS=Oryza sativa subsp. indica GN=MRS2-F PE=3 SV=1

 Score =  118 bits (295), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/95 (63%), Positives = 68/95 (71%)

Query: 27  RTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVVINLEHV 86
           R WLVV  SGQ+RVEE GKH +M RTGLPARDLRVLDPLLSYPS+ILGRE A+V+NLE V
Sbjct: 28  REWLVVPASGQARVEEAGKHAVMARTGLPARDLRVLDPLLSYPSTILGRERAIVVNLERV 87

Query: 87  KAIVTAKEVFDALSYQPSGCSVRSGFAASHFFSSS 121
           KA++TA EV    S  P+  S      A    SSS
Sbjct: 88  KAVITAAEVLLPNSKDPAFASFVCDLQARVLASSS 122

Magnesium transporter that may mediate the influx of magnesium.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q9LJN2|MRS23_ARATH Magnesium transporter MRS2-3 OS=Arabidopsis thaliana GN=MRS2-3 PE=1 SV=1

 Score =  116 bits (290), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 55/77 (71%), Positives = 65/77 (84%)

Query: 28  TWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVVINLEHVK 87
           TWLV++ SGQS  +E GKH IMRRTGLPARDLR+LDPLLSYPS++LGRE A+VINLEH+K
Sbjct: 46  TWLVLNSSGQSEPKEEGKHSIMRRTGLPARDLRILDPLLSYPSTVLGRERAIVINLEHIK 105

Query: 88  AIVTAKEVFDALSYQPS 104
           AI+TA+EV    S  PS
Sbjct: 106 AIITAQEVLLLNSKDPS 122

Magnesium transporter that may mediate the influx of magnesium.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9S9N4|MRS21_ARATH Magnesium transporter MRS2-1 OS=Arabidopsis thaliana GN=MRS2-1 PE=2 SV=1

 Score =  101 bits (252), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/94 (51%), Positives = 64/94 (68%), Gaps = 11/94 (11%)

Query: 14  PTATPRP-----------RKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVL 62
           P+A+ RP           ++G GLR+W+ V  SG ++V EV K  +MRR  LPARDLR+L
Sbjct: 27  PSASGRPPLLGVDVLGLKKRGQGLRSWIRVDTSGNTQVMEVDKFTMMRRCDLPARDLRLL 86

Query: 63  DPLLSYPSSILGRELAVVINLEHVKAIVTAKEVF 96
           DPL  YPS+ILGRE A+V+NLE ++ I+TA EV 
Sbjct: 87  DPLFVYPSTILGREKAIVVNLEQIRCIITADEVL 120

Magnesium transporter that may mediate the influx of magnesium.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SAH0|MRS2A_ARATH Magnesium transporter MRS2-10 OS=Arabidopsis thaliana GN=MRS2-10 PE=2 SV=1

 Score = 96.7 bits (239), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 57/76 (75%)

Query: 21  RKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVV 80
           ++G GL++W+ V  S  S+V EV K  +MRR  LPARDLR+LDPL  YPS+ILGRE A+V
Sbjct: 45  KRGQGLKSWIRVDTSANSQVIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIV 104

Query: 81  INLEHVKAIVTAKEVF 96
           +NLE ++ I+TA EV 
Sbjct: 105 VNLEQIRCIITADEVL 120

High-affinity magnesium transporter that mediates the influx of magnesium. Involved in tolerance to Aluminum.

Arabidopsis thaliana (taxid: 3702)

>sp|Q10D38|MRS2I_ORYSJ Magnesium transporter MRS2-I OS=Oryza sativa subsp. japonica GN=MRS2-I PE=2 SV=1

 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 41/70 (58%), Positives = 56/70 (80%)

Query: 27 RTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVVINLEHV 86
          R+W++   +G+ RV +  K+ IM R  + ARDLR+LDPLLSYPS+ILGRE A+V+NLEH+
Sbjct: 29 RSWILFDAAGEERVLDADKYAIMHRVDINARDLRILDPLLSYPSTILGRERAIVLNLEHI 88

Query: 87 KAIVTAKEVF 96
          KAI+TA+EV 
Sbjct: 89 KAIITAEEVL 98

Magnesium transporter that may mediate the influx of magnesium.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|B8AJT9|MRS2I_ORYSI Magnesium transporter MRS2-I OS=Oryza sativa subsp. indica GN=MRS2-I PE=3 SV=1

 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 41/70 (58%), Positives = 56/70 (80%)

Query: 27 RTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVVINLEHV 86
          R+W++   +G+ RV +  K+ IM R  + ARDLR+LDPLLSYPS+ILGRE A+V+NLEH+
Sbjct: 26 RSWILFDAAGEERVLDADKYAIMHRVDINARDLRILDPLLSYPSTILGRERAIVLNLEHI 85

Query: 87 KAIVTAKEVF 96
          KAI+TA+EV 
Sbjct: 86 KAIITAEEVL 95

Magnesium transporter that may mediate the influx of magnesium.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q304A0|MRS27_ARATH Magnesium transporter MRS2-7 OS=Arabidopsis thaliana GN=MRS2-7 PE=2 SV=1

 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 42/70 (60%), Positives = 55/70 (78%)

Query: 27 RTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVVINLEHV 86
          R+W+ +  +GQ  V +V KHVIM R  + ARDLR+LDP L YPS+ILGRE A+V+NLEH+
Sbjct: 27 RSWISIDATGQKTVLDVDKHVIMHRVQIHARDLRILDPNLFYPSAILGRERAIVLNLEHI 86

Query: 87 KAIVTAKEVF 96
          KAI+TA+EV 
Sbjct: 87 KAIITAEEVL 96

Low-affinity magnesium transporter that mediates the influx of magnesium.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8S1N1|MRS2E_ORYSJ Magnesium transporter MRS2-E OS=Oryza sativa subsp. japonica GN=MRS2-E PE=2 SV=1

 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 1/77 (1%)

Query: 21 RKGMGL-RTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAV 79
          RKG    R W+VV   G+ R  E GKH IM+ TGLP RDLRVLDP+LSYPS+ILGR+ A+
Sbjct: 19 RKGAAASRKWMVVPAVGEERRVEFGKHQIMKMTGLPGRDLRVLDPVLSYPSTILGRDRAI 78

Query: 80 VINLEHVKAIVTAKEVF 96
          V+ L+ VKAI+TA EV 
Sbjct: 79 VVRLQGVKAIITATEVL 95

Magnesium transporter that may mediate the influx of magnesium.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2WXD3|MRS2E_ORYSI Magnesium transporter MRS2-E OS=Oryza sativa subsp. indica GN=MRS2-E PE=3 SV=1

 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 1/77 (1%)

Query: 21 RKGMGL-RTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAV 79
          RKG    R W+VV   G+ R  E GKH IM+ TGLP RDLRVLDP+LSYPS+ILGR+ A+
Sbjct: 19 RKGAAASRKWMVVPAVGEERRVEFGKHQIMKMTGLPGRDLRVLDPVLSYPSTILGRDRAI 78

Query: 80 VINLEHVKAIVTAKEVF 96
          V+ L+ VKAI+TA EV 
Sbjct: 79 VVRLQGVKAIITATEVL 95

Magnesium transporter that may mediate the influx of magnesium.

Oryza sativa subsp. indica (taxid: 39946)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	131
359480660	401	PREDICTED: magnesium transporter MRS2-F-	0.633	0.206	0.746	5e-30
296082627	443	unnamed protein product [Vitis vinifera]	0.633	0.187	0.746	1e-29
356547452	405	PREDICTED: magnesium transporter MRS2-F-	0.633	0.204	0.697	9e-28
224105741	462	magnesium transporter [Populus trichocar	0.641	0.181	0.678	2e-27
148909765	494	unknown [Picea sitchensis]	0.709	0.188	0.62	8e-27
224147256	140	magnesium transporter [Populus trichocar	0.641	0.6	0.678	1e-26
356539605	411	PREDICTED: magnesium transporter MRS2-3-	0.725	0.231	0.610	2e-26
255562268	456	RNA splicing protein mrs2, mitochondrial	0.641	0.184	0.630	3e-26
357480695	444	Magnesium transporter [Medicago truncatu	0.717	0.211	0.631	5e-26
225429041	463	PREDICTED: magnesium transporter MRS2-3-	0.641	0.181	0.654	5e-26

>gi|359480660|ref|XP_002273137.2| PREDICTED: magnesium transporter MRS2-F-like [Vitis vinifera]

 Score =  135 bits (340), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 62/83 (74%), Positives = 72/83 (86%)

Query: 21  RKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVV 80
           RKG+G+R WLVV ESGQS +EE+GKH +MRRTGLPARDLRVLDP+LSYPS+ILGRE A+V
Sbjct: 23  RKGIGIRAWLVVLESGQSHLEELGKHSVMRRTGLPARDLRVLDPVLSYPSTILGRERAIV 82

Query: 81  INLEHVKAIVTAKEVFDALSYQP 103
           INLEH+KAI+TAKEV    S  P
Sbjct: 83  INLEHIKAIITAKEVLMVNSNNP 105

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082627|emb|CBI21632.3| unnamed protein product [Vitis vinifera]

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 62/83 (74%), Positives = 72/83 (86%)

Query: 21  RKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVV 80
           RKG+G+R WLVV ESGQS +EE+GKH +MRRTGLPARDLRVLDP+LSYPS+ILGRE A+V
Sbjct: 23  RKGIGIRAWLVVLESGQSHLEELGKHSVMRRTGLPARDLRVLDPVLSYPSTILGRERAIV 82

Query: 81  INLEHVKAIVTAKEVFDALSYQP 103
           INLEH+KAI+TAKEV    S  P
Sbjct: 83  INLEHIKAIITAKEVLMVNSNNP 105

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547452|ref|XP_003542126.1| PREDICTED: magnesium transporter MRS2-F-like [Glycine max]

 Score =  128 bits (321), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 60/86 (69%), Positives = 73/86 (84%), Gaps = 3/86 (3%)

Query: 21  RKGMG---LRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGREL 77
           RKG+G   +++W+VVSE+G +R+E+VGKH IMRRTGLPARDLRVLDP+LSYPSSILGRE 
Sbjct: 3   RKGVGTTGVKSWMVVSETGHARLEDVGKHSIMRRTGLPARDLRVLDPVLSYPSSILGRER 62

Query: 78  AVVINLEHVKAIVTAKEVFDALSYQP 103
           A+V+NLEHVKAI+TA EV    S  P
Sbjct: 63  AIVVNLEHVKAIITASEVLLINSSNP 88

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105741|ref|XP_002313918.1| magnesium transporter [Populus trichocarpa] gi|222850326|gb|EEE87873.1| magnesium transporter [Populus trichocarpa]

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/84 (67%), Positives = 71/84 (84%)

Query: 21  RKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVV 80
           +KG G+R WL++  +GQ++V EVGKH IMRRTGLPARDLR+LDPLLSYPS++LGRE A+V
Sbjct: 2   KKGTGVRPWLLLDSTGQAQVVEVGKHAIMRRTGLPARDLRILDPLLSYPSTVLGRERAIV 61

Query: 81  INLEHVKAIVTAKEVFDALSYQPS 104
           INLEH+KAI+TA+EV    S  PS
Sbjct: 62  INLEHIKAIITAQEVLLLNSRDPS 85

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148909765|gb|ABR17972.1| unknown [Picea sitchensis]

 Score =  125 bits (313), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 62/100 (62%), Positives = 74/100 (74%), Gaps = 7/100 (7%)

Query: 12  GGPTATPRPR-------KGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDP 64
           GG  A   PR       KGMG+R WL++  SGQ++V E GKH IMRRTGLPARDLR+LDP
Sbjct: 13  GGDDAEEGPRIGAGLRKKGMGVRAWLLLDASGQAQVVEAGKHAIMRRTGLPARDLRILDP 72

Query: 65  LLSYPSSILGRELAVVINLEHVKAIVTAKEVFDALSYQPS 104
           LLSYP +ILGRE A+VINLEH+KAI+TA+EV    S  P+
Sbjct: 73  LLSYPFTILGRERAIVINLEHIKAIITAQEVLLLNSRDPA 112

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224147256|ref|XP_002336439.1| magnesium transporter [Populus trichocarpa] gi|222835020|gb|EEE73469.1| magnesium transporter [Populus trichocarpa]

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/84 (67%), Positives = 71/84 (84%)

Query: 21  RKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVV 80
           +KG G+R WL++  +GQ++V EVGKH IMRRTGLPARDLR+LDPLLSYPS++LGRE A+V
Sbjct: 33  KKGTGVRPWLLLDSTGQAQVVEVGKHAIMRRTGLPARDLRILDPLLSYPSTVLGRERAIV 92

Query: 81  INLEHVKAIVTAKEVFDALSYQPS 104
           INLEH+KAI+TA+EV    S  PS
Sbjct: 93  INLEHIKAIITAQEVLLLNSRDPS 116

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356539605|ref|XP_003538287.1| PREDICTED: magnesium transporter MRS2-3-like isoform 2 [Glycine max]

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 58/95 (61%), Positives = 72/95 (75%)

Query: 10  GGGGPTATPRPRKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYP 69
           GG   + T   +KG G+R WLV+   G++ V E GKH IMRRTGLPARDLR+LDPLLSYP
Sbjct: 3   GGEERSTTGIRKKGSGVRQWLVLDGKGETEVVEAGKHAIMRRTGLPARDLRILDPLLSYP 62

Query: 70  SSILGRELAVVINLEHVKAIVTAKEVFDALSYQPS 104
           S++LGRE A+VINLEH+KAI+TA+E+    S  PS
Sbjct: 63  STLLGRERAIVINLEHIKAIITAQELLLLNSRDPS 97

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255562268|ref|XP_002522142.1| RNA splicing protein mrs2, mitochondrial, putative [Ricinus communis] gi|223538741|gb|EEF40342.1| RNA splicing protein mrs2, mitochondrial, putative [Ricinus communis]

 Score =  122 bits (307), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 53/84 (63%), Positives = 70/84 (83%)

Query: 21  RKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVV 80
           +KG+G+R WL++  +GQ+++ E GKH IMRRTGLPARDLR+LDP LSYPS++LGRE A+V
Sbjct: 36  KKGIGVRAWLLLDSTGQTQIVEAGKHAIMRRTGLPARDLRILDPQLSYPSTVLGRERAIV 95

Query: 81  INLEHVKAIVTAKEVFDALSYQPS 104
           INLEH+KAI+T++EV    S  PS
Sbjct: 96  INLEHIKAIITSQEVLLLNSKDPS 119

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357480695|ref|XP_003610633.1| Magnesium transporter [Medicago truncatula] gi|355511968|gb|AES93591.1| Magnesium transporter [Medicago truncatula]

 Score =  122 bits (306), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 60/95 (63%), Positives = 71/95 (74%), Gaps = 1/95 (1%)

Query: 11  GGGPTATPRPRK-GMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYP 69
           G    A P  RK G  +R WLVV  +G+++V E GKH IMRRTGLPARDLR+LDPLLSYP
Sbjct: 17  GTAAAAVPAIRKKGTSVRQWLVVDGTGEAQVIEAGKHAIMRRTGLPARDLRILDPLLSYP 76

Query: 70  SSILGRELAVVINLEHVKAIVTAKEVFDALSYQPS 104
           S++LGRE A+VINLEH+KAI+TA EV    S  PS
Sbjct: 77  STVLGRERAIVINLEHIKAIITANEVLLLNSRDPS 111

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429041|ref|XP_002268374.1| PREDICTED: magnesium transporter MRS2-3-like isoform 3 [Vitis vinifera]

 Score =  122 bits (306), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 55/84 (65%), Positives = 69/84 (82%)

Query: 21  RKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVV 80
           +KG G+R WL++  +GQ++V E GKH IMRRTGLPARDLR+LDPLLSYPS++LGRE A+V
Sbjct: 40  KKGTGVRAWLLLDTTGQAQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTVLGRERAIV 99

Query: 81  INLEHVKAIVTAKEVFDALSYQPS 104
           INLEH+KAI+T +EV    S  PS
Sbjct: 100 INLEHIKAIITCQEVLLLNSKDPS 123

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	131
TAIR|locus:2091176	484	MGT4 "magnesium transporter 4"	0.641	0.173	0.702	3.4e-27
TAIR|locus:2200542	442	MGT2 "magnesium transporter 2"	0.572	0.169	0.586	5.7e-19
TAIR|locus:2025767	443	MGT1 "magnesium transporter 1"	0.572	0.169	0.573	3.4e-18
TAIR|locus:2144746	294	AT5G09720 [Arabidopsis thalian	0.519	0.231	0.588	2.5e-17
TAIR|locus:2174799	394	MGT9 "magnesium transporter 9"	0.625	0.208	0.512	4.8e-17
TAIR|locus:2044254	421	MGT3 "magnesium transporter 3"	0.572	0.178	0.52	1e-16
TAIR|locus:2077665	436	MGT6 "magnesium transporter 6"	0.610	0.183	0.481	1.3e-13
TAIR|locus:2139905	408	MGT5 "AT4G28580" [Arabidopsis	0.648	0.208	0.348	3.8e-07

TAIR|locus:2091176 MGT4 "magnesium transporter 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 308 (113.5 bits), Expect = 3.4e-27, P = 3.4e-27
 Identities = 59/84 (70%), Positives = 72/84 (85%)

Query:    21 RKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVV 80
             +KG+G+RTWLV++ SGQS  +E GKH IMRRTGLPARDLR+LDPLLSYPS++LGRE A+V
Sbjct:    39 KKGVGVRTWLVLNSSGQSEPKEEGKHSIMRRTGLPARDLRILDPLLSYPSTVLGRERAIV 98

Query:    81 INLEHVKAIVTAKEVFDALSYQPS 104
             INLEH+KAI+TA+EV    S  PS
Sbjct:    99 INLEHIKAIITAQEVLLLNSKDPS 122

GO:0005634 "nucleus" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046873 "metal ion transmembrane transporter activity" evidence=IEA;ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IDA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

TAIR|locus:2200542 MGT2 "magnesium transporter 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 5.7e-19, P = 5.7e-19
 Identities = 44/75 (58%), Positives = 58/75 (77%)

Query:    21 RKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVV 80
             ++G GLR+W+ V  SG ++V EV K  +MRR  LPARDLR+LDPL  YPS+ILGRE A+V
Sbjct:    45 KRGQGLRSWIRVDTSGNTQVMEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIV 104

Query:    81 INLEHVKAIVTAKEV 95
             +NLE ++ I+TA EV
Sbjct:   105 VNLEQIRCIITADEV 119

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046873 "metal ion transmembrane transporter activity" evidence=IEA;ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IDA

TAIR|locus:2025767 MGT1 "magnesium transporter 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 226 (84.6 bits), Expect = 3.4e-18, P = 3.4e-18
 Identities = 43/75 (57%), Positives = 57/75 (76%)

Query:    21 RKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVV 80
             ++G GL++W+ V  S  S+V EV K  +MRR  LPARDLR+LDPL  YPS+ILGRE A+V
Sbjct:    45 KRGQGLKSWIRVDTSANSQVIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIV 104

Query:    81 INLEHVKAIVTAKEV 95
             +NLE ++ I+TA EV
Sbjct:   105 VNLEQIRCIITADEV 119

GO:0016020 "membrane" evidence=IEA;ISS

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046873 "metal ion transmembrane transporter activity" evidence=IEA;ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IDA

TAIR|locus:2144746 AT5G09720 [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 40/68 (58%), Positives = 54/68 (79%)

Query:    28 TWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVVINLEHVK 87
             +W+ +  +G+  V +V K+VIM R  + ARDLR+LDP L YPS+ILGRE A+V+NLEH+K
Sbjct:    20 SWISIDATGKKTVLDVDKYVIMHRVQIHARDLRILDPNLFYPSAILGRERAIVLNLEHIK 79

Query:    88 AIVTAKEV 95
             AI+TAKEV
Sbjct:    80 AIITAKEV 87

GO:0005634 "nucleus" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0030001 "metal ion transport" evidence=ISS

GO:0046873 "metal ion transmembrane transporter activity" evidence=ISS

TAIR|locus:2174799 MGT9 "magnesium transporter 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 214 (80.4 bits), Expect = 4.8e-17, P = 4.8e-17
 Identities = 42/82 (51%), Positives = 59/82 (71%)

Query:    14 PTATPRPRKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSIL 73
             P+A    +K     +W ++  +GQS   +V K+ IM R  + ARDLR+LDP LSYPS+IL
Sbjct:    12 PSAVVTVKKKTPQASWALIDATGQSEPLDVDKYEIMHRVQIHARDLRILDPNLSYPSTIL 71

Query:    74 GRELAVVINLEHVKAIVTAKEV 95
             GRE A+V+NLEH+KAI+T++EV
Sbjct:    72 GRERAIVLNLEHIKAIITSEEV 93

GO:0005634 "nucleus" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046873 "metal ion transmembrane transporter activity" evidence=IEA;ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IDA

TAIR|locus:2044254 MGT3 "magnesium transporter 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 1.0e-16, P = 1.0e-16
 Identities = 39/75 (52%), Positives = 56/75 (74%)

Query:    21 RKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVV 80
             ++G   R+W+ + + G S V E+ K  IM+R  LP+RDLR+LDPL  YPSSILGRE A+V
Sbjct:    43 KRGQSSRSWVKIDQDGNSAVLELDKATIMKRCSLPSRDLRLLDPLFIYPSSILGRERAIV 102

Query:    81 INLEHVKAIVTAKEV 95
             ++LE ++ I+TA+EV
Sbjct:   103 VSLEKIRCIITAEEV 117

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0030001 "metal ion transport" evidence=ISS

GO:0046873 "metal ion transmembrane transporter activity" evidence=ISS

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IDA

TAIR|locus:2077665 MGT6 "magnesium transporter 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 39/81 (48%), Positives = 54/81 (66%)

Query:    16 ATPRPRKGMG-LRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILG 74
             AT + +K  G  R W+    +G   V E  K  I++R  +PARDLR+L P+ S+ S+IL 
Sbjct:    51 ATGKAKKKTGGARLWMRFDRTGAMEVVECDKSTIIKRASVPARDLRILGPVFSHSSNILA 110

Query:    75 RELAVVINLEHVKAIVTAKEV 95
             RE A+V+NLE +KAIVTA+EV
Sbjct:   111 REKAIVVNLEVIKAIVTAEEV 131

GO:0016020 "membrane" evidence=IEA;ISS

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046873 "metal ion transmembrane transporter activity" evidence=IEA;ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IDA

TAIR|locus:2139905 MGT5 "AT4G28580" [Arabidopsis thaliana (taxid:3702)]

 Score = 124 (48.7 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 31/89 (34%), Positives = 49/89 (55%)

Query:    15 TATPRPRKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILG 74
             T   + R+G G+  W     +G   V    K  I+ R+ + A+DLR      S+ S IL 
Sbjct:    42 TGKSKKRRG-GVCLWTRFDRTGFMEVAGCDKSTIIERSSVSAKDLRTA---FSHSSKILA 97

Query:    75 RELAVVINLEHVKAIVTAKEVFDALSYQP 103
             RE A+V+NLE +KA++T+++V    S +P
Sbjct:    98 REKAIVLNLEVIKAVITSEQVMLLDSLRP 126


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.388    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      131       105   0.00091  102 3  11 22  0.42    30
                                                     29  0.39    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  530 (56 KB)
  Total size of DFA:  101 KB (2071 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.96u 0.21s 10.17t   Elapsed:  00:00:00
  Total cpu time:  9.96u 0.21s 10.17t   Elapsed:  00:00:00
  Start:  Fri May 10 06:23:30 2013   End:  Fri May 10 06:23:30 2013

GO:0016020 "membrane" evidence=ISS

GO:0030001 "metal ion transport" evidence=ISS

GO:0046873 "metal ion transmembrane transporter activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=IDA

GO:0009555 "pollen development" evidence=IMP

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IDA;IMP

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LJN2	MRS23_ARATH	No assigned EC number	0.7142	0.5877	0.1590	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00019261001 SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (408 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	131
cd12823	323	cd12823, Mrs2_Mfm1p-like, Saccharomyces cerevisiae	9e-24

>gnl|CDD|213357 cd12823, Mrs2_Mfm1p-like, Saccharomyces cerevisiae inner mitochondrial membrane Mg2+ transporters Mfm1p and Mrs2p-like family

 Score = 93.1 bits (232), Expect = 9e-24
 Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 3/83 (3%)

Query: 29  WLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDP-LLSYPSSILGRELAVVINLEHVK 87
           W V+  +G + V E+ K  ++R  GL  RDLR+LDP L SYP SIL RE A+++NLEH++
Sbjct: 1   WTVIDSTGNATVVELDKSELLRELGLQPRDLRLLDPTLTSYPPSILVRENAILVNLEHIR 60

Query: 88  AIVTAKEV--FDALSYQPSGCSV 108
           AI+TA EV  FD      +  S 
Sbjct: 61  AIITADEVLLFDPDGSSSALVSA 83

A eukaryotic subfamily belonging to the Escherichia coli CorA-Salmonella typhimurium ZntB_like family (EcCorA_ZntB-like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. This functionally diverse subfamily includes the inner mitochondrial membrane Mg2+ transporters Saccharomyces cerevisiae Mfm1p/Lpe10p, Mrs2p, and human MRS2/ MRS2L. It also includes a family of Arabidopsis thaliana proteins (AtMGTs) some of which are localized to distinct tissues, and not all of which can transport Mg2+. Structures of the intracellular domain of two EcCorA_ZntB-like family transporters: Vibrio parahaemolyticus and Salmonella typhimurium ZntB form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA, and Mrs2p. Natural variants such as GVN and GIN, as in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport. Length = 323

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	131
KOG2662	414	consensus Magnesium transporters: CorA family [Ino	100.0

>KOG2662 consensus Magnesium transporters: CorA family [Inorganic ion transport and metabolism]

Probab=100.00  E-value=1.9e-33  Score=242.84  Aligned_cols=103  Identities=49%  Similarity=0.695  Sum_probs=98.6

Q ss_pred             CCCCCCCCCCCceeEEEEcCCCCeEEEEecHHHHHHHcCCCCccccCcCCCCCcCceeEecCCeEEEecccceeEeeeCe
Q 032866           15 TATPRPRKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRELAVVINLEHVKAIVTAKE   94 (131)
Q Consensus        15 ~~~~~~k~~~~~~~w~~fD~~G~~~~~e~~K~~l~~~~gL~~RDLR~lDp~~~~~psILvRe~aIvvNLe~IRAIItaD~   94 (131)
                      +....+|+++++++|++||++|+++..+++|++||+++||+|||||++||+++||++|++||+|||+||||||||||+|+
T Consensus        53 ~~~~~~~~~~~~~sw~~~D~tGn~~~~e~dK~~i~~r~~L~aRDLR~ldp~~~~~ssIl~RE~aIVlNLe~IKAIItaee  132 (414)
T KOG2662|consen   53 SSSVSKKSGSGSRSWTRFDATGNSTVLEVDKYTIMKRVGLPARDLRKLDPSLSYPSSILGRENAIVLNLEHIKAIITADE  132 (414)
T ss_pred             CcccccccCCcceEEEEEcCCCCeeeccccHHHHHHHcCCChhhhhhccccccCccccccccceEEeehhhhheeeehhh
Confidence            45577899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEecCCCcchhhHHHHHHhhhcc
Q 032866           95 VFDALSYQPSGCSVRSGFAASHFF  118 (131)
Q Consensus        95 Vllfd~~~~~~~~fl~~L~~rl~~  118 (131)
                      |++||+.++ +.++..+++.|+..
T Consensus       133 Vll~d~~~~-v~~~~~el~~~l~~  155 (414)
T KOG2662|consen  133 VLLLDSLDP-VIPYNEELQRRLPV  155 (414)
T ss_pred             eeEeccccc-cchHHHHHHHHhcc
Confidence            999999998 99999999999765

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	131
3rkg_A	261	Magnesium transporter MRS2, mitochondrial; matrix	2e-20

>3rkg_A Magnesium transporter MRS2, mitochondrial; matrix located domain, hydrophobic GATE magnesium binding site, metal transport; 1.28A {Saccharomyces cerevisiae} Length = 261

 Score = 82.9 bits (204), Expect = 2e-20
 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 3/83 (3%)

Query: 17 TPRPRKGMGLRTWLVVSESGQSRV--EEVGKHVIMRRTGLPARDLRVLD-PLLSYPSSIL 73
           P         +  V +  G      E+  K   +    L  RDLR +D   +    +I+
Sbjct: 7  KPISASDSLFISCTVFNSKGNIISMSEKFPKWSFLTEHSLFPRDLRKIDNSSIDIIPTIM 66

Query: 74 GRELAVVINLEHVKAIVTAKEVF 96
           +   +VINL H+KA++   +V+
Sbjct: 67 CKPNCIVINLLHIKALIERDKVY 89

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	131
3rkg_A	261	Magnesium transporter MRS2, mitochondrial; matrix	99.97

>3rkg_A Magnesium transporter MRS2, mitochondrial; matrix located domain, hydrophobic GATE magnesium binding site, metal transport; 1.28A {Saccharomyces cerevisiae}

Probab=99.97  E-value=3.7e-31  Score=216.17  Aligned_cols=95  Identities=21%  Similarity=0.257  Sum_probs=88.0

Q ss_pred             ceeEEEEcCCCCeEEEE--ecHHHHHHHcCCCCccccCcCCCC-CcCceeEecCCeEEEecccceeEeeeCeEEEecCCC
Q 032866           26 LRTWLVVSESGQSRVEE--VGKHVIMRRTGLPARDLRVLDPLL-SYPSSILGRELAVVINLEHVKAIVTAKEVFDALSYQ  102 (131)
Q Consensus        26 ~~~w~~fD~~G~~~~~e--~~K~~l~~~~gL~~RDLR~lDp~~-~~~psILvRe~aIvvNLe~IRAIItaD~Vllfd~~~  102 (131)
                      .-+||+||++|+++.++  ++|++||+++||+|||||+|||++ +++|+|++|++||||||+|||||||+|+|+|||+.+
T Consensus        16 ~~~ct~fD~~G~~~~~~~~~~K~~l~~~~~L~~RDLR~ld~~~~~~~PsIl~R~~aIlvnL~~irAII~~d~Vllfd~~~   95 (261)
T 3rkg_A           16 FISCTVFNSKGNIISMSEKFPKWSFLTEHSLFPRDLRKIDNSSIDIIPTIMCKPNCIVINLLHIKALIERDKVYVFDTTN   95 (261)
T ss_dssp             EEEEEEECTTSCEEEEEEEEEHHHHHHHTTCCGGGGGGTSSCCSSCCCEEEECSSCEEEEETTEEEEECSSCEEEECCSC
T ss_pred             eEEEEEECCCCCEEEecccccHHHHHHHcCCChhhHHHhcccccCCCceEEecCCeEEEechhceEEEEcceEEEEcCCC
Confidence            46899999999999865  999999999999999999999996 678899999999999999999999999999999999


Q ss_pred             cchh----hHHHHHHhhhcccc
Q 032866          103 PSGC----SVRSGFAASHFFSS  120 (131)
Q Consensus       103 ~~~~----~fl~~L~~rl~~s~  120 (131)
                      +.+.    .|+++|+.|+....
T Consensus        96 ~~~~~~~~~f~~~l~~~l~~~~  117 (261)
T 3rkg_A           96 PSAAAKLSVLMYDLESKLSSTK  117 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCSS
T ss_pred             chhhhhHHHHHHHHHHHhccCC
Confidence            8776    59999999997643

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00