Citrus Sinensis ID: 032884

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-
Protein Sequence
MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFLFLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICWYVRISSDWIAFYWTLLDRFGQILYIYMLILAI
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEcccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHcEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEEEEEc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MASKLLIATVFVFDLIAFGLAVAAEqrrstatiqtdseknynyciydsdistgmGVGAFLFLLASQVLIMLASRcfccgkplspggsrAWAVILFIICWYVRISSDWIAFYWTLLDRFGQILYIYMLILAI
Flexible Loop (DISEMBL)
MASKLLIATVFVFDLIAFGLAVaaeqrrstatiqtdseknynYCIYDSDISTGMGVGAFLFLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICWYVRISSDWIAFYWTLLDRFGQILYIYMLILAI
Low Complexity Region (SEG)
MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFLFLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICWYVRISSDWIAFYWTLLDRFGQILYIYMLILAI
Disordered region (IsUnstruct)
****LLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFLFLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICWYVRISSDWIAFYWTLLDRFGQILYIYMLILA*
Disordered Region (DISOPRED)
**SKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFLFLLASQVLIMLASRCFCCGKPL*PGGSRAWAVILFIICWYVRISSDWIAFYWTLLDRFGQILYIYMLILAI
Disordered Region (DISEMBL)
MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFLFLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICWYVRISSDWIAFYWTLLDRFGQILYIYMLILAI
Disordered Region (DISPRO)
*ASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFLFLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICWYVRISSDWIAFYWTLLDRFGQILYIYMLILAI
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooo
Transmembrane Helix (MEMSAT)
iiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFLFLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICWYVRISSDWIAFYWTLLDRFGQILYIYMLILAI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	131
351721561	185	uncharacterized protein LOC100305647 pre	0.755	0.535	0.848	2e-43
351728041	185	uncharacterized protein LOC100499677 pre	0.809	0.572	0.811	6e-43
224128386	183	predicted protein [Populus trichocarpa]	0.755	0.540	0.848	8e-43
224117230	183	predicted protein [Populus trichocarpa]	0.755	0.540	0.828	3e-42
118481332	183	unknown [Populus trichocarpa]	0.755	0.540	0.828	6e-42
388491300	186	unknown [Lotus japonicus]	0.755	0.532	0.818	9e-41
255582471	184	conserved hypothetical protein [Ricinus	0.755	0.538	0.808	1e-40
449446953	184	PREDICTED: uncharacterized protein LOC10	0.755	0.538	0.808	5e-40
449431826	184	PREDICTED: uncharacterized protein LOC10	0.755	0.538	0.797	1e-39
225461377	185	PREDICTED: uncharacterized protein LOC10	0.755	0.535	0.757	1e-38

>gi|351721561|ref|NP_001238493.1| uncharacterized protein LOC100305647 precursor [Glycine max] gi|255626185|gb|ACU13437.1| unknown [Glycine max]

 Score =  180 bits (456), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 84/99 (84%), Positives = 94/99 (94%)

Query: 1  MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFL 60
          MASKLL+ TVFVFDLIAFGLAVAAEQRRSTA++ TD+EKNYNYC+Y+SDI+TG GVGAFL
Sbjct: 1  MASKLLLITVFVFDLIAFGLAVAAEQRRSTASVVTDNEKNYNYCVYNSDIATGYGVGAFL 60

Query: 61 FLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICW 99
          FLL SQVLIM+ASRCFCCGKPL+PGGSRA AV+LFIICW
Sbjct: 61 FLLVSQVLIMVASRCFCCGKPLNPGGSRACAVVLFIICW 99

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351728041|ref|NP_001238205.1| uncharacterized protein LOC100499677 precursor [Glycine max] gi|255625711|gb|ACU13200.1| unknown [Glycine max]

 Score =  178 bits (452), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 86/106 (81%), Positives = 96/106 (90%)

Query: 1   MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFL 60
           MASKLL+ TVFVFDLIAFGLAVAAEQRRSTA+I  D+EKNYNYC+Y+SDI+TG GVGAFL
Sbjct: 1   MASKLLLITVFVFDLIAFGLAVAAEQRRSTASIVPDNEKNYNYCVYNSDIATGYGVGAFL 60

Query: 61  FLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICWYVRISSD 106
           FLL SQVLIM+ASRCFCCGKPL+PGGSRA AV+LFIICW   I S+
Sbjct: 61  FLLVSQVLIMVASRCFCCGKPLNPGGSRACAVVLFIICWVFFIISE 106

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224128386|ref|XP_002329149.1| predicted protein [Populus trichocarpa] gi|118485194|gb|ABK94458.1| unknown [Populus trichocarpa] gi|222869818|gb|EEF06949.1| predicted protein [Populus trichocarpa]

 Score =  178 bits (451), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 84/99 (84%), Positives = 94/99 (94%)

Query: 1  MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFL 60
          MASKLL+ TVF+FDLIAFGLAVAAEQRRSTAT++ DSEK+Y+YCIYDSDI++G GVGAFL
Sbjct: 1  MASKLLLITVFIFDLIAFGLAVAAEQRRSTATVRPDSEKDYSYCIYDSDIASGYGVGAFL 60

Query: 61 FLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICW 99
          FLLASQVLIM AS+CFCCGKPLSPGGSRA AVILFI+CW
Sbjct: 61 FLLASQVLIMFASKCFCCGKPLSPGGSRACAVILFIVCW 99

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117230|ref|XP_002317514.1| predicted protein [Populus trichocarpa] gi|222860579|gb|EEE98126.1| predicted protein [Populus trichocarpa]

 Score =  176 bits (445), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 82/99 (82%), Positives = 93/99 (93%)

Query: 1  MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFL 60
          MASKLL+  V VFD+IAFGLAVAAEQRRSTAT+Q D+EK+Y+YCIYDSDI+TG+GVGAFL
Sbjct: 1  MASKLLLIIVSVFDIIAFGLAVAAEQRRSTATVQPDTEKDYSYCIYDSDIATGLGVGAFL 60

Query: 61 FLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICW 99
          FL+ASQVLIM AS+CFCCGKPLSPGGSRAWAVIL+I CW
Sbjct: 61 FLMASQVLIMFASKCFCCGKPLSPGGSRAWAVILYITCW 99

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118481332|gb|ABK92609.1| unknown [Populus trichocarpa]

 Score =  175 bits (443), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 82/99 (82%), Positives = 92/99 (92%)

Query: 1  MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFL 60
          MASKLL+  V VFD+IAFGLAVAAEQRRSTAT+Q D+EK+Y+YCIYDSDI+TG GVGAFL
Sbjct: 1  MASKLLLIIVSVFDIIAFGLAVAAEQRRSTATVQPDTEKDYSYCIYDSDIATGFGVGAFL 60

Query: 61 FLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICW 99
          FL+ASQVLIM AS+CFCCGKPLSPGGSRAWAVIL+I CW
Sbjct: 61 FLMASQVLIMFASKCFCCGKPLSPGGSRAWAVILYITCW 99

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388491300|gb|AFK33716.1| unknown [Lotus japonicus]

 Score =  171 bits (433), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 81/99 (81%), Positives = 89/99 (89%)

Query: 1  MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFL 60
          MASKL++  VFVFDLIAFGLAVAAEQRRSTA I  DSE NYNYC+Y+SDI+TG GVGAFL
Sbjct: 1  MASKLVLIIVFVFDLIAFGLAVAAEQRRSTAKIVLDSEANYNYCVYNSDIATGYGVGAFL 60

Query: 61 FLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICW 99
          FL+ SQ+LIM+ASRCFCCGKPL PGGSRA AVILFIICW
Sbjct: 61 FLMVSQILIMVASRCFCCGKPLKPGGSRACAVILFIICW 99

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255582471|ref|XP_002532022.1| conserved hypothetical protein [Ricinus communis] gi|223528317|gb|EEF30361.1| conserved hypothetical protein [Ricinus communis]

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 80/99 (80%), Positives = 91/99 (91%)

Query: 1  MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFL 60
          MASKLL+ TVF+FDLIAFGLAVAAEQRRSTA I+ D+E NYNYC+YDSDI+TG GVGAFL
Sbjct: 1  MASKLLLITVFIFDLIAFGLAVAAEQRRSTAVIKQDAEVNYNYCVYDSDIATGYGVGAFL 60

Query: 61 FLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICW 99
          FL+ SQV+IM+AS+CFCCGK L+PGGSRAWAVILFI CW
Sbjct: 61 FLMLSQVIIMVASQCFCCGKALNPGGSRAWAVILFITCW 99

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446953|ref|XP_004141234.1| PREDICTED: uncharacterized protein LOC101208795 [Cucumis sativus] gi|449498665|ref|XP_004160599.1| PREDICTED: uncharacterized protein LOC101224700 [Cucumis sativus]

 Score =  168 bits (426), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 80/99 (80%), Positives = 86/99 (86%)

Query: 1  MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFL 60
          MASKL++  VFV D+IAFGLAVAAEQRRSTA +  D EK YNYC+YDSDISTG GVGAFL
Sbjct: 1  MASKLILIIVFVLDIIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60

Query: 61 FLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICW 99
           L+ASQ LIM ASRCFCCGK LSPGGSRAWAVILFIICW
Sbjct: 61 LLMASQTLIMAASRCFCCGKSLSPGGSRAWAVILFIICW 99

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449431826|ref|XP_004133701.1| PREDICTED: uncharacterized protein LOC101203051 [Cucumis sativus] gi|449478168|ref|XP_004155240.1| PREDICTED: uncharacterized protein LOC101232086 [Cucumis sativus]

 Score =  167 bits (424), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 79/99 (79%), Positives = 87/99 (87%)

Query: 1  MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFL 60
          MASKLL+ TVFVFD+IAFGLA+AAEQRRS A I  D     NYC+YDSDISTG+GVGAFL
Sbjct: 1  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDPGAKTNYCVYDSDISTGLGVGAFL 60

Query: 61 FLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICW 99
          FLLASQ+LIM+ASRCFCCGKPLSPGGSRAWAV+L I CW
Sbjct: 61 FLLASQILIMVASRCFCCGKPLSPGGSRAWAVVLLITCW 99

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461377|ref|XP_002284734.1| PREDICTED: uncharacterized protein LOC100260721 isoform 2 [Vitis vinifera] gi|302143046|emb|CBI20341.3| unnamed protein product [Vitis vinifera]

 Score =  164 bits (414), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 75/99 (75%), Positives = 86/99 (86%)

Query: 1  MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFL 60
          MAS +++  V +FD+IAFGLAVAAEQRRSTA + TDSE NY YC+YDSDISTG+GVGA L
Sbjct: 1  MASTVILVVVLIFDVIAFGLAVAAEQRRSTAQVVTDSEDNYKYCVYDSDISTGLGVGALL 60

Query: 61 FLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICW 99
          FL ASQ +IM+ASRCFCCGK L+PGGSRAWAVILFI CW
Sbjct: 61 FLFASQAIIMVASRCFCCGKALNPGGSRAWAVILFITCW 99

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	131
TAIR|locus:505006522	173	AT4G27435 "AT4G27435" [Arabido	0.755	0.572	0.747	3.5e-36
TAIR|locus:2090156	175	AT3G15480 "AT3G15480" [Arabido	0.755	0.565	0.656	2.5e-33
TAIR|locus:505006194	180	AT1G61065 "AT1G61065" [Arabido	0.748	0.544	0.666	9.8e-32
TAIR|locus:2011556	175	AT1G52910 "AT1G52910" [Arabido	0.755	0.565	0.626	1.8e-30
TAIR|locus:2009922	188	AT1G13380 "AT1G13380" [Arabido	0.748	0.521	0.5	1.1e-23
TAIR|locus:2199332	201	AT1G68220 "AT1G68220" [Arabido	0.755	0.492	0.386	1.5e-12
TAIR|locus:2167200	209	AT5G17210 "AT5G17210" [Arabido	0.709	0.444	0.287	1.5e-07

TAIR|locus:505006522 AT4G27435 "AT4G27435" [Arabidopsis thaliana (taxid:3702)]

 Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
 Identities = 74/99 (74%), Positives = 85/99 (85%)

Query:     1 MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFL 60
             MASK++ A VFVF+LIAFGLAVAAEQRRSTA +  D+E  YNYC+YDSD +TG GVGAFL
Sbjct:     1 MASKIVSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFL 60

Query:    61 FLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICW 99
             F +ASQ+LIML SRCFCCGKPL PGGSRA A+ILFI+ W
Sbjct:    61 FSVASQILIMLVSRCFCCGKPLKPGGSRALALILFIVSW 99

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2090156 AT3G15480 "AT3G15480" [Arabidopsis thaliana (taxid:3702)]

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 65/99 (65%), Positives = 80/99 (80%)

Query:     1 MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFL 60
             MASKL++  VF+ DLIA GLA+AAEQRRS   ++TD +K Y+YC+Y +DI+T  G GAF+
Sbjct:     1 MASKLVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFV 60

Query:    61 FLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICW 99
              L  SQVLIM ASRCFCCGK L+PGGSRA A+ILF+ICW
Sbjct:    61 LLFVSQVLIMAASRCFCCGKSLNPGGSRACAIILFLICW 99

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:505006194 AT1G61065 "AT1G61065" [Arabidopsis thaliana (taxid:3702)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 66/99 (66%), Positives = 82/99 (82%)

Query:     1 MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFL 60
             MAS LL+  VFVFDLIAFGLAVAAEQRR+T  I  +S ++ +YC+YD DI+TG+GVG+FL
Sbjct:     1 MASVLLLLLVFVFDLIAFGLAVAAEQRRTTWQISRES-RDLSYCVYDKDIATGLGVGSFL 59

Query:    61 FLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICW 99
              LLASQ+LIM+ASRC CCG+ L+P GSR+WA+ LFI  W
Sbjct:    60 VLLASQLLIMVASRCLCCGRALTPSGSRSWAIFLFITTW 98

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2011556 AT1G52910 "AT1G52910" [Arabidopsis thaliana (taxid:3702)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 62/99 (62%), Positives = 75/99 (75%)

Query:     1 MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFL 60
             MASKL+I  VF+ DLIA GLA+AAEQRRS   +  D EK + +C Y SDI+T  G GAF+
Sbjct:     1 MASKLVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFV 60

Query:    61 FLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICW 99
              L  SQV+IM+ASRCFCCGK L PGGSRA  ++LF+ICW
Sbjct:    61 LLFISQVIIMVASRCFCCGKALKPGGSRACGIMLFLICW 99

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2009922 AT1G13380 "AT1G13380" [Arabidopsis thaliana (taxid:3702)]

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 49/98 (50%), Positives = 67/98 (68%)

Query:     2 ASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFLF 61
             AS L+   V    L+AFG ++AAE+RRS      D   N  +C+YDSD++TG GVGAFLF
Sbjct:     6 ASTLVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLF 65

Query:    62 LLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICW 99
             LL+S+ L+M  ++C C G+PL+PG  RAW++I FI  W
Sbjct:    66 LLSSESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSW 103

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2199332 AT1G68220 "AT1G68220" [Arabidopsis thaliana (taxid:3702)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 39/101 (38%), Positives = 53/101 (52%)

Query:     1 MASKLLIATVFV-FDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAF 59
             MA  + I TV     L+AF  A  AE+RRSTA    D       C Y ++ ST  G+ AF
Sbjct:     1 MAVSVSILTVVTALHLLAFVFAFGAERRRSTAVPVPDQYDEKTICKYGTEASTVYGMSAF 60

Query:    60 LFLLASQVLIMLASRCFCCGKPLSPGGS-RAWAVILFIICW 99
               LL SQ ++   ++C C GK L  G S   WA++ F++ W
Sbjct:    61 GLLLVSQAVVNGVTKCLCFGKGLVTGTSYTVWAIVFFVVSW 101

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2167200 AT5G17210 "AT5G17210" [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 29/101 (28%), Positives = 54/101 (53%)

Query:     5 LLIATVFVFDLIAFGLAVAAEQ---RRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFLF 61
             ++   +F+  L++   A  AE    +RS  T+ T S+ +   C Y    +  +G  + LF
Sbjct:     7 VMCGVLFLLGLLSAVTAFVAEATRIKRSQVTV-TVSD-SITKCTYPRSPAFNLGFTSALF 64

Query:    62 LLASQVLIMLASRCFCCGKPLSPGGSRAWAV--ILFIICWY 100
             L+ +Q+++ ++S CFCC K  +P  S  W +  I F++ W+
Sbjct:    65 LMMAQIIVSVSSGCFCCRKGPAPSRSN-WIISLICFVVSWF 104


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.333   0.143   0.460    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      131       131   0.00091  102 3  11 21  0.40    30
                                                     29  0.42    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  598 (64 KB)
  Total size of DFA:  140 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.90u 0.10s 12.00t   Elapsed:  00:00:01
  Total cpu time:  11.90u 0.10s 12.00t   Elapsed:  00:00:01
  Start:  Fri May 10 06:56:00 2013   End:  Fri May 10 06:56:01 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	131
pfam06749	97	pfam06749, DUF1218, Protein of unknown function (D	5e-11

>gnl|CDD|219160 pfam06749, DUF1218, Protein of unknown function (DUF1218)

 Score = 55.0 bits (133), Expect = 5e-11
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 57 GAFLFLLASQVLIMLASRCFCCGKPLSP--GGSRAWAVILFIICW 99
           A +FL  +QV+  +   C CCGK L P  G  RA AV+ F++ W
Sbjct: 1  AAAVFLAVAQVVGNVVGGCCCCGKALPPKSGRKRALAVVCFVLSW 45

This family contains hypothetical plant proteins of unknown function. Family members contain a number of conserved cysteine residues. Length = 97

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	131
PF06749	97	DUF1218: Protein of unknown function (DUF1218); In	99.76
PF05478	806	Prominin: Prominin; InterPro: IPR008795 The promin	91.77
cd07912	418	Tweety_N N-terminal domain of the protein encoded	88.17
PF09788	256	Tmemb_55A: Transmembrane protein 55A; InterPro: IP	86.49
PF07344	155	Amastin: Amastin surface glycoprotein; InterPro: I	80.87

>PF06749 DUF1218: Protein of unknown function (DUF1218); InterPro: IPR009606 This family contains hypothetical plant proteins of unknown function

Probab=99.76  E-value=1.6e-18  Score=122.41  Aligned_cols=63  Identities=35%  Similarity=0.677  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHHHHHhhccccCCCCCC--CccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Q 032884           57 GAFLFLLASQVLIMLASRCFCCGKPLSP--GGSRAWAVILFIICWYVRISSDWIAFYWTLLDRFG  119 (131)
Q Consensus        57 ~A~v~Ll~aqvv~~~~~~C~Ccg~~~~~--~~~r~~av~~~v~SWi~f~iA~~lLl~gt~~~~~~  119 (131)
                      +|+++|+++|+++|+++||+||+++.+|  +++|+++++||++||++|++||++|++|+++|+..
T Consensus         1 ~A~~~L~~aqvi~~~~~gC~cc~~~~~~~~~~~r~~a~~~~v~SWi~f~ia~~~ll~ga~~n~~~   65 (97)
T PF06749_consen    1 AAAVFLLAAQVIANVAGGCLCCGKRVSPKSSRNRTLAVVFFVLSWIVFIIAEALLLAGASMNARH   65 (97)
T ss_pred             CHHHHHHHHHHHHHHHhcceEeCCCCCCcccccchhhhhhHHHHHHHHHHHHHHHHHHHhccccc
Confidence            4899999999999999999999998766  37999999999999999999999999999888763

Family members contain a number of conserved cysteine residues.

>PF05478 Prominin: Prominin; InterPro: IPR008795 The prominins are an emerging family of proteins that, among the multispan membrane proteins, display a novel topology

Probab=91.77  E-value=0.82  Score=42.66  Aligned_cols=74  Identities=22%  Similarity=0.332  Sum_probs=44.8

Q ss_pred             eeecCCChhhhhHHHHHHHHHHHHHHHHHHhhccccC-CC-CCCC--------ccH---HHHHHHHHHHHHHHHHHHHHH
Q 032884           43 YCIYDSDISTGMGVGAFLFLLASQVLIMLASRCFCCG-KP-LSPG--------GSR---AWAVILFIICWYVRISSDWIA  109 (131)
Q Consensus        43 ~C~Yps~~A~~LGv~A~v~Ll~aqvv~~~~~~C~Ccg-~~-~~~~--------~~r---~~av~~~v~SWi~f~iA~~lL  109 (131)
                      +-+|.++.-.+.-+...+++++. ++.....-|+||| ++ ..|+        +.+   .-..+.|++||+..+++...|
T Consensus       406 ~~~y~~yR~~~~lil~~~llLIv-~~~~lGLl~G~~G~~~~~~p~~r~c~~~tGg~~Lm~gv~~~Flf~~~l~l~~~~~F  484 (806)
T PF05478_consen  406 YEKYDSYRWIVGLILCCVLLLIV-LCLLLGLLCGCCGYRRRADPTDRGCSSNTGGNFLMAGVGLSFLFSWFLMLLVLFYF  484 (806)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhccCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44565555444333333333333 4444555678898 43 1221        222   234567889999999999999


Q ss_pred             HHHHhhhc
Q 032884          110 FYWTLLDR  117 (131)
Q Consensus       110 l~gt~~~~  117 (131)
                      +.|..+++
T Consensus       485 l~G~~~~~  492 (806)
T PF05478_consen  485 LVGGNTYT  492 (806)
T ss_pred             HHHhhhhe
Confidence            99998865

Mouse and Homo sapiens prominin and (Mus musculus) prominin-like 1 (PROML1) are predicted to contain five membrane spanning domains, with an N-terminal domain exposed to the extracellular space followed by four, alternating small cytoplasmic and large extracellular, loops and a cytoplasmic C-terminal domain []. The exact function of prominin is unknown although in humans defects in PROM1, the gene coding for prominin, cause retinal degeneration [].; GO: 0016021 integral to membrane

>cd07912 Tweety_N N-terminal domain of the protein encoded by the Drosophila tweety gene and related proteins, a family of chloride ion channels

Probab=88.17  E-value=3.1  Score=36.55  Aligned_cols=31  Identities=16%  Similarity=0.240  Sum_probs=18.6

Q ss_pred             hhhh-HHHHHHHHHHHHHHHHHHhhccccCCC
Q 032884           51 STGM-GVGAFLFLLASQVLIMLASRCFCCGKP   81 (131)
Q Consensus        51 A~~L-Gv~A~v~Ll~aqvv~~~~~~C~Ccg~~   81 (131)
                      ++++ |..|++.+++.-+...+...|.||+++
T Consensus        38 Sv~~~a~iaavwlil~ll~ll~~~~~~CCcr~   69 (418)
T cd07912          38 SLLILASIPAACLILSLLFLLVYLITRCCDRK   69 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence            5554 455555665665666666667766554

The protein product of the Drosophila tweety (tty) gene is thought to form a trans-membrane protein with five membrane-spanning regions and a cytoplasmic C-terminus. This N-terminal domain contains the putative transmembrane spanning regions. Tweety has been suggested as a candidate for a large conductance chloride channel, both in vertebrate and insect cells. Three human homologs have been identified and designated TTYH1-3. TTYH2 has been associated with the progression of cancer, and Drosophila melanogaster tweety has been assumed to play a role in development. TTYH2, and TTYH3 bind to and are ubiquinated by Nedd4-2, a HECT type E3 ubiquitin ligase, which most likely plays a role in controlling the cellular levels of tweety family proteins.

>PF09788 Tmemb_55A: Transmembrane protein 55A; InterPro: IPR019178 Members of this family catalyse the hydrolysis of the 4-position phosphate of phosphatidylinositol 4,5-bisphosphate, in the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H(2)O = 1-phosphatidyl-1D-myo-inositol 5-phosphate + phosphate

Probab=86.49  E-value=0.9  Score=37.58  Aligned_cols=50  Identities=28%  Similarity=0.373  Sum_probs=36.9

Q ss_pred             HhhccccCCCCCCC--ccHHHHHHHHHHHHHHHHHHHHHHHHHH--hhhcchhHH
Q 032884           72 ASRCFCCGKPLSPG--GSRAWAVILFIICWYVRISSDWIAFYWT--LLDRFGQIL  122 (131)
Q Consensus        72 ~~~C~Ccg~~~~~~--~~r~~av~~~v~SWi~f~iA~~lLl~gt--~~~~~~~~~  122 (131)
                      ..+|+-|+|..+-+  -.|..++.||+++-+.+++|..+- +||  ..+++|.|.
T Consensus       177 lARCPHCrKvSSVG~~faRkR~i~f~llgllfliiaiglt-vGT~~~A~~~~giY  230 (256)
T PF09788_consen  177 LARCPHCRKVSSVGPRFARKRAIIFFLLGLLFLIIAIGLT-VGTWTYAKTYGGIY  230 (256)
T ss_pred             cccCCCCceeccccchHhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHhhcCcEe
Confidence            37999888765444  478899999999988888887764 566  556776543

>PF07344 Amastin: Amastin surface glycoprotein; InterPro: IPR009944 This family contains the eukaryotic surface glycoprotein amastin (approximately 180 residues long)

Probab=80.87  E-value=18  Score=27.06  Aligned_cols=89  Identities=17%  Similarity=0.153  Sum_probs=57.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccceeeeccCCCCcceeecCCChhhhhHHHHHHHHHHHHHHHHHHhhccccCCCCC
Q 032884            4 KLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFLFLLASQVLIMLASRCFCCGKPLS   83 (131)
Q Consensus         4 ~~v~~vv~~LgliAfiLgi~AE~~r~~~~~~~~~~~~~~~C~Yps~~A~~LGv~A~v~Ll~aqvv~~~~~~C~Ccg~~~~   83 (131)
                      -...++.++++..++++|+..=-..                +..+-+...|.+.+.+.+.+.=++....=.=..|+ +.+
T Consensus        66 ~afaIisi~~~~~a~v~g~~~l~~~----------------~~~r~v~l~L~~~~~~~~~v~wa~~v~~Y~~~~C~-~~~  128 (155)
T PF07344_consen   66 QAFAIISIFVYGAAFVLGVLLLCCC----------------SCLRWVCLVLNIVGIVTLLVVWALMVVVYYGGFCG-ALK  128 (155)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCc-Ccc
Confidence            3456788889999999999855443                22233557788888877766655433322223444 333


Q ss_pred             CCccH-HHHHHHHHHHHHHHHHHHHHH
Q 032884           84 PGGSR-AWAVILFIICWYVRISSDWIA  109 (131)
Q Consensus        84 ~~~~r-~~av~~~v~SWi~f~iA~~lL  109 (131)
                      +...+ ..+-.+++.+|...+++.+.|
T Consensus       129 ~~~~~yg~GF~L~v~aw~l~~i~ii~L  155 (155)
T PF07344_consen  129 SRGYKYGAGFALFVAAWCLDIINIIFL  155 (155)
T ss_pred             CCCcccCccHHHHHHHHHHHHHHHHhC
Confidence            33323 468888999999999987654

In Trypanosoma cruzi, amastin is particularly abundant during the amastigote stage.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00