Citrus Sinensis ID: 033043

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------13
Protein Sequence
MGVLAVIAKRLDALIGYASLRAIESPSTLDDQQWLTLPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKVLQMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETKKR
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHccccccccccEEHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHccHHHHHHHHHEEcccccccccEEEcccHHHHHHHHHHHHHHcHHccHHHHHHHHHHHHHHHccccccccccccHHHHHHHccccHHHHHHHHHHHHHccHHHHHHHHHHHcHHHccc
Coil and Loop (DISEMBL)
MGVLAVIAKRLDALIGYASlraiespstlddqqwltlPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIggyvspssnytaDQRKVLQMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETKKR
Flexible Loop (DISEMBL)
MGVLAVIAKRLDALIGYASLRAiespstlddqQWLTLPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKVLQMMSLDARKSVSQYVEKHGWEAVERAIKAaeketkkr
Low Complexity Region (SEG)
MGVLAVIAKRLDALIGYASLRAIESPSTLDDQQWLTLPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKVLQMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETKKR
Disordered region (IsUnstruct)
**VLAVIAKRLDALIGYASLRAIESPSTLDDQQWLTLPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYT*****VL************QYVEKHGWEA***************
Disordered Region (DISOPRED)
*GVLAVIAKRLDALIGYASLRAIESPSTLDDQQWLTLPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVS*********************KSVSQYVEKHGWEAVERA***********
Disordered Region (DISEMBL)
MGVLAVIAKRLDALIGYASLRAIESPSTLDDQQWLTLPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKVLQMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETKKR
Disordered Region (DISPRO)
*GVLAVIAKRLDALIGYASLRAIESPSTLDDQQWLTLPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKVLQMMSLDARKSVSQYVEKHGWEAVERAIKAAEK*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGVLAVIAKRLDALIGYASLRAIESPSTLDDQQWLTLPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKVLQMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETKKR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	128	2.2.26 [Sep-21-2011]
Q682H0	158	HVA22-like protein f OS=A	yes	no	0.992	0.803	0.585	2e-45
Q9S7V4	177	HVA22-like protein a OS=A	no	no	0.929	0.672	0.303	1e-12
Q9S784	184	HVA22-like protein c OS=A	no	no	0.992	0.690	0.301	6e-11
Q9FED2	116	HVA22-like protein e OS=A	no	no	0.546	0.603	0.395	2e-10
Q9SYX7	167	HVA22-like protein b OS=A	no	no	0.539	0.413	0.363	9e-09
Q07764	130	Protein HVA22 OS=Hordeum	N/A	no	0.546	0.538	0.365	2e-08
Q9S760	135	HVA22-like protein d OS=A	no	no	0.460	0.437	0.375	2e-07
P0CN16	206	Protein YOP1 OS=Cryptococ	yes	no	0.625	0.388	0.336	2e-05
P0CN17	206	Protein YOP1 OS=Cryptococ	N/A	no	0.625	0.388	0.336	2e-05
Q9UU91	182	Protein yop1 OS=Schizosac	yes	no	0.468	0.329	0.320	6e-05

>sp|Q682H0|HA22F_ARATH HVA22-like protein f OS=Arabidopsis thaliana GN=HVA22F PE=2 SV=1

 Score =  180 bits (457), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 92/157 (58%), Positives = 107/157 (68%), Gaps = 30/157 (19%)

Query: 1   MGVLAVIAKRLDALIG---------YASLRAIESPSTLDDQQWLT--------------- 36
           MG +  IAKR DAL+G         YAS RAIESP+ LDDQQWLT               
Sbjct: 1   MGFIIAIAKRFDALVGPGVMLLYPLYASFRAIESPTMLDDQQWLTYWIIYSLITIFELSV 60

Query: 37  ------LPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKV 90
                 LPFW Y+KLLFCMWLVLPMF GAAYIY   +R+YVKIG  V   +NYT +QR+V
Sbjct: 61  WRVLAWLPFWPYLKLLFCMWLVLPMFSGAAYIYSNFVRQYVKIGMNVGGGTNYTDEQRRV 120

Query: 91  LQMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETKK 127
           LQMMSLDARKSV  YV++ GW++VE+AIKAAEKET+K
Sbjct: 121 LQMMSLDARKSVQDYVDRFGWDSVEKAIKAAEKETRK 157

Arabidopsis thaliana (taxid: 3702)

>sp|Q9S7V4|HA22A_ARATH HVA22-like protein a OS=Arabidopsis thaliana GN=HVA22A PE=2 SV=1

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 39/158 (24%)

Query: 2   GVLAVIAKRLDALIG---------YASLRAIESPSTLDDQQWLT---------------- 36
             L V+ +  D L G         YAS++AIE+ S  DD+QWLT                
Sbjct: 7   NFLKVLLRNFDVLAGPVVSLVYPLYASVQAIETQSHADDKQWLTYWVLYSLLTLIELTFA 66

Query: 37  -----LPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSN---YTADQR 88
                LP W+YMKL+   WLV+P F GAAY+YE  +R       +V+P S    Y   + 
Sbjct: 67  KLIEWLPIWSYMKLILTCWLVIPYFSGAAYVYEHFVRPV-----FVNPRSINIWYVPKKM 121

Query: 89  KVLQMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETK 126
            + +    D   +  +Y+ ++G +A E+ +  A+K  +
Sbjct: 122 DIFRKPD-DVLTAAEKYIAENGPDAFEKILSRADKSKR 158

Arabidopsis thaliana (taxid: 3702)

>sp|Q9S784|HA22C_ARATH HVA22-like protein c OS=Arabidopsis thaliana GN=HVA22C PE=2 SV=1

 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 32/159 (20%)

Query: 2   GVLAVIAKRLDALIG---------YASLRAIESPSTLDDQQWLT---------------- 36
            VL V+ K  D L           YAS++AIE+ S  +D+QWLT                
Sbjct: 9   NVLQVLIKNFDVLALPLVTLVYPLYASVKAIETRSLPEDEQWLTYWVLYALISLFELTFS 68

Query: 37  -----LPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKVL 91
                 P W YMKL    WLVLP F+GA +IY+  IR + +     +    Y   ++   
Sbjct: 69  KPLEWFPIWPYMKLFGICWLVLPQFNGAEHIYKHFIRPFYRDPQRATTKIWYVPHKKFNF 128

Query: 92  --QMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETKKR 128
             +    D   +  +Y+E+HG EA ER I   +   + R
Sbjct: 129 FPKRDDDDILTAAEKYMEQHGTEAFERMIVKKDSYERGR 167

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FED2|HA22E_ARATH HVA22-like protein e OS=Arabidopsis thaliana GN=HVA22E PE=2 SV=1

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 46/91 (50%), Gaps = 21/91 (23%)

Query: 17  YASLRAIESPSTLDDQQWLT---------------------LPFWAYMKLLFCMWLVLPM 55
           YAS+ AIESPS +DD+QWL                      +P W   KL+F  WLVLP 
Sbjct: 26  YASVIAIESPSKVDDEQWLAYWILYSFLTLSELILQSLLEWIPIWYTAKLVFVAWLVLPQ 85

Query: 56  FHGAAYIYEKHIRRYVKIGGYVSPSSNYTAD 86
           F GAA+IY K +R   K  G + P   + A+
Sbjct: 86  FRGAAFIYNKVVREQFKKYGILKPKVEHQAE 116

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SYX7|HA22B_ARATH HVA22-like protein b OS=Arabidopsis thaliana GN=HVA22B PE=2 SV=2

 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 30/99 (30%)

Query: 3   VLAVIAKRLDALIG---------YASLRAIESPSTLDDQQWLT----------------- 36
           ++ VI K  D + G         YAS+RAIES S  DD+QWLT                 
Sbjct: 8   LVKVIFKNFDVIAGPVISLVYPLYASVRAIESRSHGDDKQWLTYWALYSLIKLFELTFFR 67

Query: 37  ----LPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYV 71
               +P + Y KL    WLVLP  +GAAY+YE ++R ++
Sbjct: 68  LLEWIPLYPYAKLALTSWLVLPGMNGAAYLYEHYVRSFL 106

Arabidopsis thaliana (taxid: 3702)

>sp|Q07764|HVA22_HORVU Protein HVA22 OS=Hordeum vulgare GN=HVA22 PE=2 SV=1

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 23/93 (24%)

Query: 17  YASLRAIESPSTLDDQQWLT---------------------LPFWAYMKLLFCMWLVLPM 55
           YAS+ A+ESPS +DD+QWL                      +P W  +KLLF  WL LP 
Sbjct: 26  YASVCAMESPSKVDDEQWLAYWILYSFITLLEMVAEPVLYWIPVWYPVKLLFVAWLALPQ 85

Query: 56  FHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQR 88
           F GA++IY+K +R   ++  Y   + N  AD +
Sbjct: 86  FKGASFIYDKVVRE--QLRKYRGRNRNGDADHK 116

Hordeum vulgare (taxid: 4513)

>sp|Q9S760|HA22D_ARATH HVA22-like protein d OS=Arabidopsis thaliana GN=HVA22D PE=2 SV=1

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 21/80 (26%)

Query: 17  YASLRAIESPSTLDDQQWLT---------------------LPFWAYMKLLFCMWLVLPM 55
           YAS+ A+ES + +DD+QWL                      +P W  +KL+F  WLVLP 
Sbjct: 26  YASVIAMESTTKVDDEQWLAYWIIYSFLSLTELILQSLIEWIPIWYTVKLVFVAWLVLPQ 85

Query: 56  FHGAAYIYEKHIRRYVKIGG 75
           F GAA+IY + +R   K  G
Sbjct: 86  FQGAAFIYNRVVREQFKKHG 105

Arabidopsis thaliana (taxid: 3702)

>sp|P0CN16|YOP1_CRYNJ Protein YOP1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=YOP1 PE=3 SV=1

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 27/107 (25%)

Query: 7   IAKRLDALIGYA-----SLRAIESPSTLDDQQWLT----------------------LPF 39
           +A+ +  LIG+A     S+ AIESP T DD+QWLT                      +P 
Sbjct: 75  LAQPISNLIGWALPAYLSILAIESPQTNDDKQWLTYWVVFGSLNLVESMGLRAVLYWVPM 134

Query: 40  WAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTAD 86
           +   K LF +WL+LP   GA  +Y   +R  V      S SS  T+D
Sbjct: 135 YFVFKTLFTIWLMLPATRGAEILYFHFLRPMVGNVKSRSQSSFGTSD 181

Involved in membrane/vesicle trafficking.

Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684)

>sp|P0CN17|YOP1_CRYNB Protein YOP1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=YOP1 PE=3 SV=1

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 27/107 (25%)

Query: 7   IAKRLDALIGYA-----SLRAIESPSTLDDQQWLT----------------------LPF 39
           +A+ +  LIG+A     S+ AIESP T DD+QWLT                      +P 
Sbjct: 75  LAQPISNLIGWALPAYLSILAIESPQTNDDKQWLTYWVVFGSLNLVESMGLRAVLYWVPM 134

Query: 40  WAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTAD 86
           +   K LF +WL+LP   GA  +Y   +R  V      S SS  T+D
Sbjct: 135 YFVFKTLFTIWLMLPATRGAEILYFHFLRPMVGNVKSRSQSSFGTSD 181

Involved in membrane/vesicle trafficking.

Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) (taxid: 283643)

>sp|Q9UU91|YOP1_SCHPO Protein yop1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yop1 PE=1 SV=1

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 21/81 (25%)

Query: 13  ALIGYASLRAIESPSTLDDQQWLT---------------------LPFWAYMKLLFCMWL 51
           A+  + S+ AIE+ +  DD QWLT                     +P +  +K +F +WL
Sbjct: 66  AMPAFFSINAIETTNKADDTQWLTYYLVTSFLNVIEYWSQLILYYVPVYWLLKAIFLIWL 125

Query: 52  VLPMFHGAAYIYEKHIRRYVK 72
            LP F+GA  IY   IR Y+ 
Sbjct: 126 ALPKFNGATIIYRHLIRPYIT 146

Required for the correct positioning of the cellular division plane by delimiting the actomyosin ring assembly at the cell equator.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	128
255558708	156	Protein HVA22, putative [Ricinus communi	0.976	0.801	0.668	8e-49
297827985	158	abscisic acid-responsive HVA22 family pr	0.992	0.803	0.598	2e-44
42569877	158	HVA22-like protein f [Arabidopsis thalia	0.992	0.803	0.585	1e-43
222619195	1132	hypothetical protein OsJ_03330 [Oryza sa	0.976	0.110	0.560	1e-42
57899108	156	abscisic acid-induced protein-like [Oryz	0.976	0.801	0.560	1e-40
242058573	156	hypothetical protein SORBIDRAFT_03g03347	0.976	0.801	0.554	4e-40
357136256	156	PREDICTED: HVA22-like protein f-like [Br	0.976	0.801	0.560	8e-40
413951149	173	hypothetical protein ZEAMMB73_909820 [Ze	0.976	0.722	0.547	2e-39
449450864	156	PREDICTED: HVA22-like protein f-like [Cu	0.976	0.801	0.535	4e-39
225446885	156	PREDICTED: HVA22-like protein f [Vitis v	0.984	0.807	0.550	1e-38

>gi|255558708|ref|XP_002520378.1| Protein HVA22, putative [Ricinus communis] gi|223540425|gb|EEF41994.1| Protein HVA22, putative [Ricinus communis]

 Score =  198 bits (503), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 105/157 (66%), Positives = 116/157 (73%), Gaps = 32/157 (20%)

Query: 1   MGVLAVIAKRLDALIG---------YASLRAIESPSTLDDQQWLT--------------- 36
           MGVL V+AKRLDAL+G         YASLRAIESPSTLDDQQWLT               
Sbjct: 1   MGVLGVVAKRLDALVGPGIMLLFPLYASLRAIESPSTLDDQQWLTYWIIYSFTTLFELSC 60

Query: 37  ------LPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKV 90
                 LPFW Y+KLLFCMWLVLP+F+GAAYIYE  +R+YVKIGG VS   NY+ DQRKV
Sbjct: 61  YKILVWLPFWPYIKLLFCMWLVLPIFNGAAYIYENMVRKYVKIGGRVS--GNYSDDQRKV 118

Query: 91  LQMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETKK 127
           LQMMSLDARKSV QYV+K+GW+A ERAIKAAEKETKK
Sbjct: 119 LQMMSLDARKSVVQYVDKYGWDAFERAIKAAEKETKK 155

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297827985|ref|XP_002881875.1| abscisic acid-responsive HVA22 family protein [Arabidopsis lyrata subsp. lyrata] gi|297327714|gb|EFH58134.1| abscisic acid-responsive HVA22 family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  183 bits (465), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 94/157 (59%), Positives = 109/157 (69%), Gaps = 30/157 (19%)

Query: 1   MGVLAVIAKRLDALIG---------YASLRAIESPSTLDDQQWLT--------------- 36
           MGV+ VIAKR DALIG         YAS RAIESP+ LDDQQWLT               
Sbjct: 1   MGVIIVIAKRFDALIGPGVMLLYPLYASFRAIESPTMLDDQQWLTYWIIYSLITIFELSV 60

Query: 37  ------LPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKV 90
                 LPFW Y+KLLFCMWLVLPMF GAAYIY   +R+YVKIG  V   +NYT +QR+V
Sbjct: 61  WRILAWLPFWPYLKLLFCMWLVLPMFSGAAYIYSNFVRQYVKIGMNVGGGTNYTDEQRRV 120

Query: 91  LQMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETKK 127
           LQMMSLDARKSV  YV++ GW++VE+AIKAAE+ET+K
Sbjct: 121 LQMMSLDARKSVQDYVDRFGWDSVEKAIKAAERETRK 157

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42569877|ref|NP_181810.2| HVA22-like protein f [Arabidopsis thaliana] gi|57012578|sp|Q682H0.1|HA22F_ARATH RecName: Full=HVA22-like protein f; Short=AtHVA22f gi|51968936|dbj|BAD43160.1| unnamed protein product [Arabidopsis thaliana] gi|330255079|gb|AEC10173.1| HVA22-like protein f [Arabidopsis thaliana]

 Score =  180 bits (457), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 92/157 (58%), Positives = 107/157 (68%), Gaps = 30/157 (19%)

Query: 1   MGVLAVIAKRLDALIG---------YASLRAIESPSTLDDQQWLT--------------- 36
           MG +  IAKR DAL+G         YAS RAIESP+ LDDQQWLT               
Sbjct: 1   MGFIIAIAKRFDALVGPGVMLLYPLYASFRAIESPTMLDDQQWLTYWIIYSLITIFELSV 60

Query: 37  ------LPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKV 90
                 LPFW Y+KLLFCMWLVLPMF GAAYIY   +R+YVKIG  V   +NYT +QR+V
Sbjct: 61  WRVLAWLPFWPYLKLLFCMWLVLPMFSGAAYIYSNFVRQYVKIGMNVGGGTNYTDEQRRV 120

Query: 91  LQMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETKK 127
           LQMMSLDARKSV  YV++ GW++VE+AIKAAEKET+K
Sbjct: 121 LQMMSLDARKSVQDYVDRFGWDSVEKAIKAAEKETRK 157

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222619195|gb|EEE55327.1| hypothetical protein OsJ_03330 [Oryza sativa Japonica Group]

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 88/157 (56%), Positives = 106/157 (67%), Gaps = 32/157 (20%)

Query: 1    MGVLAVIAKRLDALIG---------YASLRAIESPSTLDDQQWLT--------------- 36
            MGVL  +A+ +DAL+G         YAS+RAIESPSTLDDQQWLT               
Sbjct: 977  MGVLGALARHMDALVGPGIMLLYPLYASMRAIESPSTLDDQQWLTYWVLYSLITLFELSC 1036

Query: 37   ------LPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKV 90
                   P W YMKLLFC WLVLP+F+GAAYIYE H+RRY KIG YVSP  NY   QRK 
Sbjct: 1037 WKVLQWFPLWPYMKLLFCCWLVLPIFNGAAYIYETHVRRYFKIGQYVSP--NYNERQRKA 1094

Query: 91   LQMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETKK 127
            LQMMSLDARKSV +++E HG +A+++ I+AAE+E K+
Sbjct: 1095 LQMMSLDARKSVERFIESHGPDALDKIIRAAEEEAKR 1131

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|57899108|dbj|BAD86927.1| abscisic acid-induced protein-like [Oryza sativa Japonica Group] gi|57899745|dbj|BAD87465.1| abscisic acid-induced protein-like [Oryza sativa Japonica Group] gi|218188991|gb|EEC71418.1| hypothetical protein OsI_03599 [Oryza sativa Indica Group]

 Score =  171 bits (432), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 88/157 (56%), Positives = 106/157 (67%), Gaps = 32/157 (20%)

Query: 1   MGVLAVIAKRLDALIG---------YASLRAIESPSTLDDQQWLT--------------- 36
           MGVL  +A+ +DAL+G         YAS+RAIESPSTLDDQQWLT               
Sbjct: 1   MGVLGALARHMDALVGPGIMLLYPLYASMRAIESPSTLDDQQWLTYWVLYSLITLFELSC 60

Query: 37  ------LPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKV 90
                  P W YMKLLFC WLVLP+F+GAAYIYE H+RRY KIG YVSP  NY   QRK 
Sbjct: 61  WKVLQWFPLWPYMKLLFCCWLVLPIFNGAAYIYETHVRRYFKIGQYVSP--NYNERQRKA 118

Query: 91  LQMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETKK 127
           LQMMSLDARKSV +++E HG +A+++ I+AAE+E K+
Sbjct: 119 LQMMSLDARKSVERFIESHGPDALDKIIRAAEEEAKR 155

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242058573|ref|XP_002458432.1| hypothetical protein SORBIDRAFT_03g033470 [Sorghum bicolor] gi|241930407|gb|EES03552.1| hypothetical protein SORBIDRAFT_03g033470 [Sorghum bicolor]

 Score =  169 bits (427), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 87/157 (55%), Positives = 106/157 (67%), Gaps = 32/157 (20%)

Query: 1   MGVLAVIAKRLDALIG---------YASLRAIESPSTLDDQQWLT--------------- 36
           MGVL  +A+ LDAL+G         YAS+RAIESPS+LDDQQWLT               
Sbjct: 1   MGVLGTLARNLDALVGPGIMLLYPLYASMRAIESPSSLDDQQWLTYWVLYSLITLFELSC 60

Query: 37  ------LPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKV 90
                  P W YMKLLFC WLVLP+F+GAAYIYE H+RRY KIG YVSP   Y   QR+V
Sbjct: 61  WKVLQWFPLWPYMKLLFCCWLVLPIFNGAAYIYEAHVRRYFKIGNYVSPI--YNERQRRV 118

Query: 91  LQMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETKK 127
           LQMMSLDARKSV +++E HG +A+++ I+AAE+E K+
Sbjct: 119 LQMMSLDARKSVERFIETHGPDALDKIIRAAEEEAKR 155

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357136256|ref|XP_003569721.1| PREDICTED: HVA22-like protein f-like [Brachypodium distachyon]

 Score =  168 bits (425), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 88/157 (56%), Positives = 107/157 (68%), Gaps = 32/157 (20%)

Query: 1   MGVLAVIAKRLDALIG---------YASLRAIESPSTLDDQQWLT--------------- 36
           MGVL  +A+ LD+L+G         YAS+RAIESPS+LDDQQWLT               
Sbjct: 1   MGVLGALARHLDSLVGPGIMLLYPLYASMRAIESPSSLDDQQWLTYWVLYSLITLFELSC 60

Query: 37  ------LPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKV 90
                 LP W Y+KLLFC WLVLP+F+GAAYIYE H+RRY KIG YVSP   Y+  QRKV
Sbjct: 61  WKALQWLPLWPYVKLLFCCWLVLPIFNGAAYIYETHVRRYFKIGQYVSP--GYSERQRKV 118

Query: 91  LQMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETKK 127
           LQMMSLDARKSV +++E HG  A+E+ I+AAE+E K+
Sbjct: 119 LQMMSLDARKSVERFIETHGPGALEKIIQAAEQEAKR 155

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413951149|gb|AFW83798.1| hypothetical protein ZEAMMB73_909820 [Zea mays]

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 86/157 (54%), Positives = 106/157 (67%), Gaps = 32/157 (20%)

Query: 1   MGVLAVIAKRLDALIG---------YASLRAIESPSTLDDQQWLT--------------- 36
           MGVL  +A+ LDAL+G         YAS+RAIESPS+LDDQQWLT               
Sbjct: 1   MGVLGTLARNLDALVGPGVMLLYPLYASMRAIESPSSLDDQQWLTYWVLYSLITLFELSS 60

Query: 37  ------LPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKV 90
                  P W YMKLL C WLVLP+F+GAAYIYE H+RRY K+G YVSPS  Y   QR+V
Sbjct: 61  WKVLQWFPLWPYMKLLLCCWLVLPVFNGAAYIYEAHVRRYFKMGTYVSPS--YGERQRRV 118

Query: 91  LQMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETKK 127
           LQMMSLDARKSV ++++ HG +A++R I+AAE+E K+
Sbjct: 119 LQMMSLDARKSVERFIDTHGPDALDRIIRAAEEEAKR 155

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450864|ref|XP_004143182.1| PREDICTED: HVA22-like protein f-like [Cucumis sativus] gi|449505181|ref|XP_004162399.1| PREDICTED: HVA22-like protein f-like [Cucumis sativus]

 Score =  165 bits (418), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 84/157 (53%), Positives = 109/157 (69%), Gaps = 32/157 (20%)

Query: 1   MGVLAVIAKRLDALIG---------YASLRAIESPSTLDDQQWLT--------------- 36
           MG+L  IAK LDA+IG         YAS+RAIESPSTLDDQQWLT               
Sbjct: 1   MGILGAIAKNLDAIIGPGVMLLYPLYASIRAIESPSTLDDQQWLTYWVIYSLITLFELTF 60

Query: 37  ------LPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKV 90
                 +P W Y+KL+ C+WLVLP+F+GAAYIYE  +R+YVKIG YV+P  NY  +Q+KV
Sbjct: 61  WKILVWIPLWGYIKLVACLWLVLPIFNGAAYIYENIVRKYVKIGRYVNP--NYPENQKKV 118

Query: 91  LQMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETKK 127
           LQMM+LD+RKSV +Y++++G +A ER +KAAE+E +K
Sbjct: 119 LQMMTLDSRKSVERYIDRYGPDAFERVVKAAEREARK 155

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446885|ref|XP_002279952.1| PREDICTED: HVA22-like protein f [Vitis vinifera]

 Score =  164 bits (414), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 87/158 (55%), Positives = 105/158 (66%), Gaps = 32/158 (20%)

Query: 1   MGVLAVIAKRLDALIG---------YASLRAIESPSTLDDQQWLT--------------- 36
           MG    + + LDALIG         YAS+RAIE+PSTLDDQQWLT               
Sbjct: 1   MGFPGAVFRFLDALIGPTCMLLFPLYASVRAIETPSTLDDQQWLTYWILYSFITLFELSC 60

Query: 37  ------LPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKV 90
                 LPFW+YMKLLFC+WLVLP+F+GAAYIY+  +R+YVK+GG V  SS+Y   QRKV
Sbjct: 61  WQILAWLPFWSYMKLLFCLWLVLPIFNGAAYIYDHFVRKYVKVGGTV--SSSYPESQRKV 118

Query: 91  LQMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETKKR 128
           L MM+ DAR+SV  Y+ KHG EA ER +KAAEKE +KR
Sbjct: 119 LLMMTPDARRSVEYYISKHGPEAFERVVKAAEKEARKR 156

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	128
TAIR|locus:2052339	158	HVA22F "AT2G42820" [Arabidopsi	0.710	0.575	0.714	1.8e-32
TAIR|locus:2019225	177	HVA22A "AT1G74520" [Arabidopsi	0.671	0.485	0.350	5.2e-10
TAIR|locus:2205055	184	HVA22C "AT1G69700" [Arabidopsi	0.718	0.5	0.326	3.3e-08
TAIR|locus:2163290	116	HVA22E "AT5G50720" [Arabidopsi	0.406	0.448	0.425	1.4e-07
TAIR|locus:2117318	135	HVA22D "AT4G24960" [Arabidopsi	0.320	0.303	0.465	2.6e-06
POMBASE|SPCC830.08c	182	yop1 "ER membrane protein DP1/	0.273	0.192	0.428	7.7e-06
TAIR|locus:2154139	167	HVA22B "AT5G62490" [Arabidopsi	0.289	0.221	0.435	2.4e-05
UNIPROTKB|Q29RM3	189	REEP5 "Receptor expression-enh	0.171	0.116	0.583	0.0001

TAIR|locus:2052339 HVA22F "AT2G42820" [Arabidopsis thaliana (taxid:3702)]

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 65/91 (71%), Positives = 77/91 (84%)

Query:    37 LPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKVLQMMSL 96
             LPFW Y+KLLFCMWLVLPMF GAAYIY   +R+YVKIG  V   +NYT +QR+VLQMMSL
Sbjct:    67 LPFWPYLKLLFCMWLVLPMFSGAAYIYSNFVRQYVKIGMNVGGGTNYTDEQRRVLQMMSL 126

Query:    97 DARKSVSQYVEKHGWEAVERAIKAAEKETKK 127
             DARKSV  YV++ GW++VE+AIKAAEKET+K
Sbjct:   127 DARKSVQDYVDRFGWDSVEKAIKAAEKETRK 157

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2019225 HVA22A "AT1G74520" [Arabidopsis thaliana (taxid:3702)]

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 34/97 (35%), Positives = 54/97 (55%)

Query:    33 QWLTLPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSS-N--YTADQRK 89
             +WL  P W+YMKL+   WLV+P F GAAY+YE H  R V    +V+P S N  Y   +  
Sbjct:    70 EWL--PIWSYMKLILTCWLVIPYFSGAAYVYE-HFVRPV----FVNPRSINIWYVPKKMD 122

Query:    90 VLQMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETK 126
             + +    D   +  +Y+ ++G +A E+ +  A+K  +
Sbjct:   123 IFRKPD-DVLTAAEKYIAENGPDAFEKILSRADKSKR 158

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA

GO:0042538 "hyperosmotic salinity response" evidence=IEP

GO:0009269 "response to desiccation" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

TAIR|locus:2205055 HVA22C "AT1G69700" [Arabidopsis thaliana (taxid:3702)]

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 32/98 (32%), Positives = 50/98 (51%)

Query:    33 QWLTLPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKVL- 91
             +W   P W YMKL    WLVLP F+GA +IY+  IR + +     +    Y   ++    
Sbjct:    72 EWF--PIWPYMKLFGICWLVLPQFNGAEHIYKHFIRPFYRDPQRATTKIWYVPHKKFNFF 129

Query:    92 -QMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETKKR 128
              +    D   +  +Y+E+HG EA ER I   +K++ +R
Sbjct:   130 PKRDDDDILTAAEKYMEQHGTEAFERMI--VKKDSYER 165

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0042538 "hyperosmotic salinity response" evidence=IEP

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2163290 HVA22E "AT5G50720" [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 23/54 (42%), Positives = 31/54 (57%)

Query:    33 QWLTLPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTAD 86
             +W+  P W   KL+F  WLVLP F GAA+IY K +R   K  G + P   + A+
Sbjct:    65 EWI--PIWYTAKLVFVAWLVLPQFRGAAFIYNKVVREQFKKYGILKPKVEHQAE 116

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA

GO:0042538 "hyperosmotic salinity response" evidence=IEP

GO:0009269 "response to desiccation" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

TAIR|locus:2117318 HVA22D "AT4G24960" [Arabidopsis thaliana (taxid:3702)]

 Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 20/43 (46%), Positives = 27/43 (62%)

Query:    33 QWLTLPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGG 75
             +W+  P W  +KL+F  WLVLP F GAA+IY + +R   K  G
Sbjct:    65 EWI--PIWYTVKLVFVAWLVLPQFQGAAFIYNRVVREQFKKHG 105

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0009414 "response to water deprivation" evidence=IEP;RCA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA

GO:0042538 "hyperosmotic salinity response" evidence=IEP

GO:0009555 "pollen development" evidence=IMP

GO:0009908 "flower development" evidence=IMP

GO:0010507 "negative regulation of autophagy" evidence=IMP

GO:0009269 "response to desiccation" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

POMBASE|SPCC830.08c yop1 "ER membrane protein DP1/Yop1" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 84 (34.6 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query:    37 LPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYV 71
             +P +  +K +F +WL LP F+GA  IY   IR Y+
Sbjct:   111 VPVYWLLKAIFLIWLALPKFNGATIIYRHLIRPYI 145

GO:0005515 "protein binding" evidence=IPI

GO:0006886 "intracellular protein transport" evidence=IC

GO:0010687 "site selection involved in cell cycle cytokinesis" evidence=IMP

GO:0016192 "vesicle-mediated transport" evidence=ISO

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=ISO

GO:0031965 "nuclear membrane" evidence=IEA

GO:0032153 "cell division site" evidence=IDA

GO:0032541 "cortical endoplasmic reticulum" evidence=IDA

GO:0034613 "cellular protein localization" evidence=IMP

GO:0071786 "endoplasmic reticulum tubular network organization" evidence=IMP

TAIR|locus:2154139 HVA22B "AT5G62490" [Arabidopsis thaliana (taxid:3702)]

 Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query:    33 QWLTLPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYV 71
             +W+  P + Y KL    WLVLP  +GAAY+YE ++R ++
Sbjct:    70 EWI--PLYPYAKLALTSWLVLPGMNGAAYLYEHYVRSFL 106

GO:0003674 "molecular_function" evidence=ND

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0042538 "hyperosmotic salinity response" evidence=IEP

GO:0010162 "seed dormancy process" evidence=RCA

UNIPROTKB|Q29RM3 REEP5 "Receptor expression-enhancing protein 5" [Bos taurus (taxid:9913)]

 Score = 75 (31.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
 Identities = 14/24 (58%), Positives = 18/24 (75%)

Query:    17 YASLRAIESPSTLDDQQWLTLPFW 40
             Y S++AIESP+  DD QWLT  +W
Sbjct:    69 YVSIKAIESPNKEDDTQWLT--YW 90

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q682H0	HA22F_ARATH	No assigned EC number	0.5859	0.9921	0.8037	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh1_pm.C_scaffold_4002018 annotation not avaliable (158 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	128
pfam03134	94	pfam03134, TB2_DP1_HVA22, TB2/DP1, HVA22 family	1e-17
COG5052	186	COG5052, YOP1, Protein involved in membrane traffi	2e-06

>gnl|CDD|217381 pfam03134, TB2_DP1_HVA22, TB2/DP1, HVA22 family

 Score = 71.8 bits (177), Expect = 1e-17
 Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 21/77 (27%)

Query: 16 GYASLRAIESPSTLDDQQWLT---------------------LPFWAYMKLLFCMWLVLP 54
           YAS +A+ES    DD QWLT                     +PF+  +KLLF +WLVLP
Sbjct: 18 AYASYKALESKDKEDDTQWLTYWVVYSFLTLFESFSDIILSWIPFYYELKLLFLVWLVLP 77

Query: 55 MFHGAAYIYEKHIRRYV 71
             GA+YIY+K IR  +
Sbjct: 78 KTQGASYIYDKFIRPLL 94

This family includes members from a wide variety of eukaryotes. It includes the TB2/DP1 (deleted in polyposis) protein, which in humans is deleted in severe forms of familial adenomatous polyposis, an autosomal dominant oncological inherited disease. The family also includes the plant protein of known similarity to TB2/DP1, the HVA22 abscisic acid-induced protein, which is thought to be a regulatory protein. Length = 94

>gnl|CDD|227385 COG5052, YOP1, Protein involved in membrane traffic [Intracellular trafficking and secretion]

 Score = 44.0 bits (104), Expect = 2e-06
 Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 21/80 (26%)

Query: 13  ALIGYASLRAIESPSTLDDQQWLT---------------------LPFWAYMKLLFCMWL 51
           +L    SL A  + + +DD Q LT                     +PF+  +K +F +WL
Sbjct: 69  SLPAQLSLVAFYTLNFMDDTQLLTYWMVFGFLSAIEKYSGAILSKVPFYWTLKNVFLLWL 128

Query: 52  VLPMFHGAAYIYEKHIRRYV 71
           +LP   GA  IY+  I   V
Sbjct: 129 LLPRTEGARIIYDDIIAPDV 148

Length = 186

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	128
KOG1725	186	consensus Protein involved in membrane traffic (YO	99.91
PF03134	94	TB2_DP1_HVA22: TB2/DP1, HVA22 family; InterPro: IP	99.79
KOG1726	225	consensus HVA22/DP1 gene product-related proteins	99.58
COG5052	186	YOP1 Protein involved in membrane traffic [Intrace	99.51

>KOG1725 consensus Protein involved in membrane traffic (YOP1/TB2/DP1/HVA22 family) [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.91  E-value=5.2e-26  Score=176.93  Aligned_cols=105  Identities=38%  Similarity=0.624  Sum_probs=88.0

Q ss_pred             hHHHHHHHHhHHHH-----HHHHHHHhCCCcccccceee---------------------ecchHHHHHHHHHHHhcccc
Q 033043            3 VLAVIAKRLDALIG-----YASLRAIESPSTLDDQQWLT---------------------LPFWAYMKLLFCMWLVLPMF   56 (128)
Q Consensus         3 ~lg~~a~~l~~l~g-----YaS~kAies~~~~d~~~WLt---------------------iPfY~~~K~~fl~wL~~P~~   56 (128)
                      .+|.++.++||++|     |+|++||||++++||+|||+                     |||||++|++|++||++|++
T Consensus        53 ~~g~~~~l~cn~ig~~yP~y~Sv~aIes~~k~dD~~wL~YWivys~lslie~~~~~il~~iP~y~~~K~~fl~~l~lP~~  132 (186)
T KOG1725|consen   53 LFGSGGPLLCNLIGFLYPAYASVKAIESPSKDDDTQWLTYWIVYSILSLVEFFSVAILSWIPFYWYAKLIFLLWLVLPQF  132 (186)
T ss_pred             HhcccHHHHHHHHHHHHHHHHHHHhhhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHhccCC
Confidence            46778899999999     99999999999999999999                     99999999999999999999


Q ss_pred             CcHHHHHHHhhhhhhh-hCCccCCCCCCCHHHHHHHhhcCHHHHHHHHHHHHHhCHHHH
Q 033043           57 HGAAYIYEKHIRRYVK-IGGYVSPSSNYTADQRKVLQMMSLDARKSVSQYVEKHGWEAV  114 (128)
Q Consensus        57 ~GA~~iY~~~i~P~~~-~~~~id~~~~~~~~~k~~~~~~~~~~~~a~~~y~~e~G~eA~  114 (128)
                      +||.++|+++|||++. |..++|...+.+   +    ..+++...++..+..++++++.
T Consensus       133 ~Ga~~iY~~~vrp~~~~~~~~~~~~~~~~---k----~~~~~i~~~a~~~~n~~~~~~~  184 (186)
T KOG1725|consen  133 NGAAIIYNHIVRPFFLKHSREIDDIEDAN---K----QIKDDILTAAGEEENKKDADAP  184 (186)
T ss_pred             CCceeeechhhhhhhhhhhhhhhhhhhcc---c----ccchhcccccchhhccccCCCC
Confidence            9999999999999996 777777322222   1    2346677778888887777653

>PF03134 TB2_DP1_HVA22: TB2/DP1, HVA22 family; InterPro: IPR004345 This family includes members from a wide variety of eukaryotes

Probab=99.79  E-value=6.5e-20  Score=127.14  Aligned_cols=68  Identities=50%  Similarity=0.941  Sum_probs=63.9

Q ss_pred             HHHHHHHHhHHHH-----HHHHHHHhCCCcccccceee---------------------ecchHHHHHHHHHHHhccccC
Q 033043            4 LAVIAKRLDALIG-----YASLRAIESPSTLDDQQWLT---------------------LPFWAYMKLLFCMWLVLPMFH   57 (128)
Q Consensus         4 lg~~a~~l~~l~g-----YaS~kAies~~~~d~~~WLt---------------------iPfY~~~K~~fl~wL~~P~~~   57 (128)
                      +|.+++.+|+++|     |+|+||+++++++++++||+                     +|+|+++|++|++||.+|+++
T Consensus         1 ~~~~~~~l~~~i~~~yP~~~s~kal~~~~~~~~~~wL~YWiv~~~~~~~e~~~~~~l~~iP~y~~~K~~~~~wL~~p~~~   80 (94)
T PF03134_consen    1 FGFIARLLCNLIGILYPAYKSFKALKSKDKKDLKQWLTYWIVYGLFTLFESFLDFILSWIPFYYEFKLLFLVWLQLPQFQ   80 (94)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHcCCCC
Confidence            4667888888888     99999999999999999999                     999999999999999999999


Q ss_pred             cHHHHHHHhhhhhh
Q 033043           58 GAAYIYEKHIRRYV   71 (128)
Q Consensus        58 GA~~iY~~~i~P~~   71 (128)
                      ||.++|+++++|++
T Consensus        81 Ga~~iy~~~i~P~~   94 (94)
T PF03134_consen   81 GAEYIYDKFIRPFL   94 (94)
T ss_pred             cHHHHHHHHccccC
Confidence            99999999999975

It includes the TB2/DP1 (deleted in polyposis) protein which in human is deleted in severe forms of familial adenomatous polyposis, an autosomal dominant oncological inherited disease. The family also includes the plant protein of known similarity to TB2/DP1, the HVA22 abscisic acid-induced protein (e.g. Q07764 from SWISSPROT), which is thought to be a regulatory protein.

>KOG1726 consensus HVA22/DP1 gene product-related proteins [Defense mechanisms]

Probab=99.58  E-value=2e-15  Score=120.62  Aligned_cols=63  Identities=30%  Similarity=0.732  Sum_probs=57.8

Q ss_pred             HHHHHHHHhC--CCcccccceee---------------------ecchHHHHHHHHHHHhccccCcHHHHHHHhhhhhhh
Q 033043           16 GYASLRAIES--PSTLDDQQWLT---------------------LPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVK   72 (128)
Q Consensus        16 gYaS~kAies--~~~~d~~~WLt---------------------iPfY~~~K~~fl~wL~~P~~~GA~~iY~~~i~P~~~   72 (128)
                      .|+|+||+++  ++..+...|+.                     ||||+++|++|++||..|.++|+.+||+.|+||++.
T Consensus        15 Ay~tyKavk~~~~~i~el~~W~~YWIv~A~~t~~e~~~d~~lsw~P~Y~e~Kl~fv~wL~~p~t~G~~~vY~~f~~p~ls   94 (225)
T KOG1726|consen   15 AYATYKAVKSNRKDIRELLRWMMYWIVFAALTVFETLTDFLLSWFPFYSEFKLAFVIWLLSPATKGASYVYRKFLRPFLS   94 (225)
T ss_pred             HHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccccCccHHHHHHHhhhhhh
Confidence            3999999999  55666777777                     999999999999999999999999999999999997


Q ss_pred             -hCCccC
Q 033043           73 -IGGYVS   78 (128)
Q Consensus        73 -~~~~id   78 (128)
                       ||+.||
T Consensus        95 ~~E~eid  101 (225)
T KOG1726|consen   95 KHEEEID  101 (225)
T ss_pred             hHHHHHH
Confidence             888998

>COG5052 YOP1 Protein involved in membrane traffic [Intracellular trafficking and secretion]

Probab=99.51  E-value=9e-15  Score=113.47  Aligned_cols=69  Identities=38%  Similarity=0.540  Sum_probs=62.3

Q ss_pred             hHHHHHHHHhHHHH-----HHHHHHHhCCCcccccceee---------------------ecchHHHHHHHHHHHhcccc
Q 033043            3 VLAVIAKRLDALIG-----YASLRAIESPSTLDDQQWLT---------------------LPFWAYMKLLFCMWLVLPMF   56 (128)
Q Consensus         3 ~lg~~a~~l~~l~g-----YaS~kAies~~~~d~~~WLt---------------------iPfY~~~K~~fl~wL~~P~~   56 (128)
                      ++|.+. ++.|++|     +-|+.|+++.+..||+|||+                     +||||..|.+|++|+..|+|
T Consensus        55 vlG~g~-ilt~~~~~~lP~~~~l~a~~~~n~~dd~q~l~ywmV~~~lsaie~~s~~il~~vP~Y~~~K~vFllw~~~prt  133 (186)
T COG5052          55 VLGFGL-ILTNVAGFSLPAQLSLVAFYTLNFMDDTQLLTYWMVFGFLSAIEKYSGAILSKVPFYWTLKNVFLLWLLLPRT  133 (186)
T ss_pred             hhhHHH-HHHHHHHHHccHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcccc
Confidence            345544 6666666     89999999999999999999                     99999999999999999999


Q ss_pred             CcHHHHHHHhhhhhhh
Q 033043           57 HGAAYIYEKHIRRYVK   72 (128)
Q Consensus        57 ~GA~~iY~~~i~P~~~   72 (128)
                      +||..||+++|+|+.+
T Consensus       134 ~GA~~IY~~~i~p~~s  149 (186)
T COG5052         134 EGARIIYDDIIAPDVS  149 (186)
T ss_pred             CceeeeHHhhcccccc
Confidence            9999999999999996

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00