Citrus Sinensis ID: 033147

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120------
Protein Sequence
MMHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFMSRLSDNGEKYWASLKTSPEC
Secondary Structure (PSIPRED)
cEEEEEEEEccccEEEEEEEEEEEEccccccHHHHHHHHHHHHHccHHHHHccccccccccccccccccccccccccccccEEEEEEcccEEEEEEcccccEEEEEEEcccccccccEEEEccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHcccccHHEEEEEEEEEEccccccHHHHHHHHHHHHHccHHHHHHHccccccccccccccccccccccccccccEEEEEEccccEEEEEcccccccEEEEEEcccccccEEEEEEcccc
Coil and Loop (DISEMBL)
MMHQICWYFTeswdqfringrvdvidgsnsdpeklQIREKSWFGCSMKARLqyldpeqgcpsvneqpkefsldpcagpvdaFCVLildpdqvdylnlkSNQKLKFMSRLSDNGEKYWASLKTSPEC
Flexible Loop (DISEMBL)
MMHQICWYFTESWDQFRINGRVDvidgsnsdpeklQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFmsrlsdngekywaslktspec
Low Complexity Region (SEG)
MMHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFMSRLSDNGEKYWASLKTSPEC
Disordered region (IsUnstruct)
***QICWYFTESWDQFRINGRVDVIDG********QIREKSWFGCSMKARLQYLD**************FSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKF*********************
Disordered Region (DISOPRED)
MMHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPE**********************DAFCVLILDPDQVDYLNLKSNQKLKFMSRLSDNGEKYWASLKTSPE*
Disordered Region (DISEMBL)
MMHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFMSRLSDNGEKYW*********
Disordered Region (DISPRO)
MMHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQG**********FS**PCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFMSRLSDNGEKYWASLKTSP*C
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MMHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFMSRLSDNGEKYWASLKTSPEC
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	126	2.2.26 [Sep-21-2011]
Q9ZPY1	198	Pyridoxine/pyridoxamine 5	yes	no	0.960	0.611	0.524	2e-33

>sp|Q9ZPY1|PPOX2_ARATH Pyridoxine/pyridoxamine 5'-phosphate oxidase 2 OS=Arabidopsis thaliana GN=PPOX2 PE=1 SV=2

 Score =  140 bits (354), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 64/122 (52%), Positives = 91/122 (74%), Gaps = 1/122 (0%)

Query: 4   QICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSV 63
           ++CWYF+++W+QFRINGR++VID SN D  KLQ REK+WF  S+++RL Y+ P  G P  
Sbjct: 77  EMCWYFSDTWEQFRINGRIEVIDASNPDQTKLQQREKAWFANSLRSRLIYVCPTPGSPCN 136

Query: 64  NEQ-PKEFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFMSRLSDNGEKYWASLKT 122
           +EQ  ++  LDP +GPV  +C+L+L+P++VDYLNLK+NQ+L F S  +  GEK W S K 
Sbjct: 137 SEQSSQQVKLDPSSGPVPEYCLLLLEPEKVDYLNLKTNQRLFFSSMATGTGEKCWTSEKV 196

Query: 123 SP 124
           +P
Sbjct: 197 NP 198

Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). Has an in vitro catalytic efficiency for PNP approximately 300-fold lower than that of PPOX1.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 4EC: .EC: 3EC: .EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	126
356560059	196	PREDICTED: uncharacterized protein LOC10	0.960	0.617	0.639	8e-39
388496120	196	unknown [Medicago truncatula]	0.960	0.617	0.622	1e-38
195649895	205	hypothetical protein [Zea mays]	0.960	0.590	0.598	6e-38
255564637	233	conserved hypothetical protein [Ricinus	0.968	0.523	0.617	7e-38
225470948	197	PREDICTED: pyridoxine/pyridoxamine 5'-ph	0.960	0.614	0.639	2e-37
414864362	205	TPA: hypothetical protein ZEAMMB73_33119	0.960	0.590	0.590	3e-37
224130576	197	predicted protein [Populus trichocarpa]	0.960	0.614	0.639	5e-37
242042505	204	hypothetical protein SORBIDRAFT_01g04956	0.952	0.588	0.606	5e-37
224068008	199	predicted protein [Populus trichocarpa]	0.960	0.608	0.622	6e-37
255644461	137	unknown [Glycine max]	0.952	0.875	0.636	7e-37

>gi|356560059|ref|XP_003548313.1| PREDICTED: uncharacterized protein LOC100779815 [Glycine max]

 Score =  164 bits (416), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 78/122 (63%), Positives = 94/122 (77%), Gaps = 1/122 (0%)

Query: 4   QICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSV 63
           +ICWYFT+SW+QFRING VD+IDG N DP KLQ REKSWF  S+++RLQYL P  G P +
Sbjct: 75  EICWYFTDSWEQFRINGDVDIIDGLNPDPLKLQQREKSWFASSLRSRLQYLLPNPGLPCL 134

Query: 64  NEQP-KEFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFMSRLSDNGEKYWASLKT 122
           NEQ   E SLDP  GPVDAFC+LIL+P+QVDYLNLKSNQ+L F S +SD  +K W   + 
Sbjct: 135 NEQALPEISLDPSIGPVDAFCLLILEPNQVDYLNLKSNQRLTFKSSVSDAAKKSWIVERV 194

Query: 123 SP 124
           +P
Sbjct: 195 NP 196

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388496120|gb|AFK36126.1| unknown [Medicago truncatula]

 Score =  164 bits (415), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 76/122 (62%), Positives = 93/122 (76%), Gaps = 1/122 (0%)

Query: 4   QICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSV 63
           +ICWYFT+SW+QFRING VD+IDG+N DP KLQ REKSWF  S+++R QYL P  G P +
Sbjct: 75  EICWYFTDSWEQFRINGHVDIIDGTNPDPLKLQQREKSWFASSLRSRSQYLWPNPGLPCL 134

Query: 64  NEQPK-EFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFMSRLSDNGEKYWASLKT 122
           NEQ + E  LDP  GPVDAFC+L+L+PDQVDYLNLKSNQ+L F S L+D   K W   + 
Sbjct: 135 NEQAQIEIMLDPSVGPVDAFCLLVLEPDQVDYLNLKSNQRLTFRSSLTDAANKSWIVERV 194

Query: 123 SP 124
           +P
Sbjct: 195 NP 196

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|195649895|gb|ACG44415.1| hypothetical protein [Zea mays]

 Score =  162 bits (409), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 73/122 (59%), Positives = 94/122 (77%), Gaps = 1/122 (0%)

Query: 4   QICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSV 63
           +ICWYFT+SW+QFRI+G +DVID S +DP KLQ +EK+WF  S+K+RLQYL P+ G P +
Sbjct: 84  EICWYFTDSWEQFRISGSIDVIDASTTDPAKLQHKEKAWFSSSVKSRLQYLGPQPGIPVL 143

Query: 64  -NEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFMSRLSDNGEKYWASLKT 122
            +E  K   LDP AGPVDAFC+L+LDP++VDYLNLKSNQ+L F  R  D+G   W ++K 
Sbjct: 144 DDEHVKGVHLDPLAGPVDAFCLLVLDPEKVDYLNLKSNQRLTFTRRQKDDGSNDWMAVKV 203

Query: 123 SP 124
           SP
Sbjct: 204 SP 205

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255564637|ref|XP_002523313.1| conserved hypothetical protein [Ricinus communis] gi|223537401|gb|EEF39029.1| conserved hypothetical protein [Ricinus communis]

 Score =  161 bits (408), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 76/123 (61%), Positives = 92/123 (74%), Gaps = 1/123 (0%)

Query: 3   HQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPS 62
            +ICWYFT+SW+QFRINGRVDVIDGS+ DP KL++REKSWF  S+K+RLQYL P  G P 
Sbjct: 111 RKICWYFTDSWEQFRINGRVDVIDGSDPDPVKLELREKSWFASSIKSRLQYLGPNPGLPC 170

Query: 63  VNEQ-PKEFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFMSRLSDNGEKYWASLK 121
           + EQ P E  LDP +GPV AFC+L+LDP+QVDYLNLKS+Q+  F      NGE  W S  
Sbjct: 171 LTEQHPSELFLDPSSGPVAAFCLLVLDPEQVDYLNLKSSQRTIFTIGQRVNGENSWNSES 230

Query: 122 TSP 124
            +P
Sbjct: 231 INP 233

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225470948|ref|XP_002265908.1| PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase [Vitis vinifera] gi|297745497|emb|CBI40577.3| unnamed protein product [Vitis vinifera]

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/122 (63%), Positives = 95/122 (77%), Gaps = 1/122 (0%)

Query: 4   QICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSV 63
           +ICWYFT+SW+QFRINGRVDVIDGS+ DP KLQ RE +WF  S+K+RLQYL P  G P +
Sbjct: 76  EICWYFTDSWEQFRINGRVDVIDGSDPDPMKLQERENAWFASSLKSRLQYLGPNPGLPCL 135

Query: 64  NEQP-KEFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFMSRLSDNGEKYWASLKT 122
           +EQP +E S DP  GPV AFC+LILDPDQVDYLNLK+N++L F S  + +G K W S K 
Sbjct: 136 SEQPAQECSPDPSTGPVAAFCLLILDPDQVDYLNLKNNERLTFTSSKNVDGVKCWNSEKI 195

Query: 123 SP 124
           +P
Sbjct: 196 NP 197

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414864362|tpg|DAA42919.1| TPA: hypothetical protein ZEAMMB73_331194 [Zea mays]

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 72/122 (59%), Positives = 94/122 (77%), Gaps = 1/122 (0%)

Query: 4   QICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSV 63
           +ICWYFT+SW+QFRI+G +DVID S +DP KLQ +EK+WF  S+K+R QYL P+ G P +
Sbjct: 84  EICWYFTDSWEQFRISGSIDVIDASTTDPAKLQHKEKAWFSSSVKSRSQYLGPQPGIPVL 143

Query: 64  -NEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFMSRLSDNGEKYWASLKT 122
            +E  K+  LDP AGPVDAFC+L+LDP++VDYLNLKSNQ+L F  R  D+G   W ++K 
Sbjct: 144 DDEHVKDVHLDPLAGPVDAFCLLVLDPEKVDYLNLKSNQRLIFTRRQKDDGSNDWMAVKV 203

Query: 123 SP 124
           SP
Sbjct: 204 SP 205

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224130576|ref|XP_002320875.1| predicted protein [Populus trichocarpa] gi|222861648|gb|EEE99190.1| predicted protein [Populus trichocarpa]

 Score =  159 bits (401), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 78/122 (63%), Positives = 91/122 (74%), Gaps = 1/122 (0%)

Query: 4   QICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSV 63
           +ICWYF++SW+QFRINGRVDVIDGSN DPEKLQ REKSWF  S+K+RLQYL P  G P +
Sbjct: 76  EICWYFSDSWEQFRINGRVDVIDGSNPDPEKLQQREKSWFASSLKSRLQYLGPNPGLPCL 135

Query: 64  NEQP-KEFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFMSRLSDNGEKYWASLKT 122
           +EQ   EF LDP +GPV  FC+L+LDPDQVDYLNLKSNQ+         NGE  W S   
Sbjct: 136 SEQSLNEFFLDPSSGPVATFCLLVLDPDQVDYLNLKSNQRTVSTLSRCANGEMCWNSEMI 195

Query: 123 SP 124
           +P
Sbjct: 196 NP 197

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242042505|ref|XP_002468647.1| hypothetical protein SORBIDRAFT_01g049560 [Sorghum bicolor] gi|241922501|gb|EER95645.1| hypothetical protein SORBIDRAFT_01g049560 [Sorghum bicolor]

 Score =  159 bits (401), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 74/122 (60%), Positives = 97/122 (79%), Gaps = 2/122 (1%)

Query: 4   QICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSV 63
           +ICWYFT+SW+QFRI+G +DVID S++DP KLQ REK+WF  S+K+RLQYL P+ G P +
Sbjct: 84  EICWYFTDSWEQFRISGSIDVIDASSADPAKLQYREKAWFSSSVKSRLQYLGPQPGIPVL 143

Query: 64  -NEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFMSRLSDNGEKYWASLKT 122
            +E  K   LDP AGPVDAFC+L+LDP++VDYLNLKSNQ+L F +R +D+G   W ++K 
Sbjct: 144 DDEHVKGVHLDPLAGPVDAFCLLVLDPEKVDYLNLKSNQRLMF-TRQNDDGSNDWMAVKV 202

Query: 123 SP 124
           SP
Sbjct: 203 SP 204

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224068008|ref|XP_002302643.1| predicted protein [Populus trichocarpa] gi|222844369|gb|EEE81916.1| predicted protein [Populus trichocarpa]

 Score =  158 bits (400), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 76/122 (62%), Positives = 92/122 (75%), Gaps = 1/122 (0%)

Query: 4   QICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSV 63
           +ICWYFT+SW+QFRINGRVDVIDGSN +P KLQ REK WF  ++K+RLQYL P  G P +
Sbjct: 78  EICWYFTDSWEQFRINGRVDVIDGSNPNPAKLQQREKLWFASAIKSRLQYLGPNPGLPCL 137

Query: 64  NEQ-PKEFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFMSRLSDNGEKYWASLKT 122
           +EQ P EF LDP +GPV  FC+L+L+PDQVDYLNLKSNQ++      S NGE  W S   
Sbjct: 138 SEQSPDEFFLDPSSGPVATFCLLVLEPDQVDYLNLKSNQRIVSTLSRSANGEMCWNSEMI 197

Query: 123 SP 124
           +P
Sbjct: 198 NP 199

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255644461|gb|ACU22734.1| unknown [Glycine max]

 Score =  158 bits (400), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 77/121 (63%), Positives = 92/121 (76%), Gaps = 1/121 (0%)

Query: 5   ICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVN 64
           ICWYFT+SW+QFRING VD+IDG N DP KLQ REKSWF  S+++RLQYL P  G P +N
Sbjct: 17  ICWYFTDSWEQFRINGDVDIIDGLNPDPLKLQQREKSWFASSLRSRLQYLLPNPGLPCLN 76

Query: 65  EQP-KEFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFMSRLSDNGEKYWASLKTS 123
           EQ   E SLDP  GPVDAFC+LIL+P+QVDYLNLKSNQ+L F S +SD  +K     + +
Sbjct: 77  EQALPEISLDPSIGPVDAFCLLILEPNQVDYLNLKSNQRLTFKSSVSDAAKKSRIVERVN 136

Query: 124 P 124
           P
Sbjct: 137 P 137

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	126
TAIR|locus:2039949	198	AT2G46580 [Arabidopsis thalian	0.960	0.611	0.524	2.5e-33

TAIR|locus:2039949 AT2G46580 [Arabidopsis thaliana (taxid:3702)]

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 64/122 (52%), Positives = 91/122 (74%)

Query:     4 QICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSV 63
             ++CWYF+++W+QFRINGR++VID SN D  KLQ REK+WF  S+++RL Y+ P  G P  
Sbjct:    77 EMCWYFSDTWEQFRINGRIEVIDASNPDQTKLQQREKAWFANSLRSRLIYVCPTPGSPCN 136

Query:    64 NEQP-KEFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFMSRLSDNGEKYWASLKT 122
             +EQ  ++  LDP +GPV  +C+L+L+P++VDYLNLK+NQ+L F S  +  GEK W S K 
Sbjct:   137 SEQSSQQVKLDPSSGPVPEYCLLLLEPEKVDYLNLKTNQRLFFSSMATGTGEKCWTSEKV 196

Query:   123 SP 124
             +P
Sbjct:   197 NP 198


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.442    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      126       126   0.00091  102 3  11 22  0.40    31
                                                     29  0.40    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  160 KB (2094 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.76u 0.08s 12.84t   Elapsed:  00:00:00
  Total cpu time:  12.76u 0.08s 12.84t   Elapsed:  00:00:00
  Start:  Fri May 10 16:08:20 2013   End:  Fri May 10 16:08:20 2013

GO:0004733 "pyridoxamine-phosphate oxidase activity" evidence=IEA

GO:0008615 "pyridoxine biosynthetic process" evidence=IEA

GO:0010181 "FMN binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZPY1	PPOX2_ARATH	1, ., 4, ., 3, ., 5	0.5245	0.9603	0.6111	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	126
TIGR04026	185	TIGR04026, PPOX_FMN_cyano, PPOX class probable FMN	6e-18
pfam12766	98	pfam12766, Pyridox_oxase_2, Pyridoxamine 5'-phosph	4e-07
COG5135	245	COG5135, COG5135, Uncharacterized conserved protei	2e-06

>gnl|CDD|188541 TIGR04026, PPOX_FMN_cyano, PPOX class probable FMN-dependent enzyme, alr4036 family

 Score = 74.6 bits (184), Expect = 6e-18
 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 4/110 (3%)

Query: 4   QICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSV 63
           +ICWYF ++ +QFR+ G++ ++  ++ DPE+LQ     W   S  AR Q+  P  G P  
Sbjct: 72  EICWYFPKTREQFRLRGKLTLVT-ADDDPERLQAH---WQQLSDAARSQWFWPHPGQPLN 127

Query: 64  NEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFMSRLSDNG 113
                   L   A P + F +L+L+P  VD+L L+ +   + +    +NG
Sbjct: 128 PTAAFPEELPDNAPPPENFVLLLLEPQSVDHLELRGHPHNRRLWERDENG 177

Members of the PPOX family (see pfam01243) may contain either FMN or F420 as cofactor. This subfamily described here is widespread in Cyanobacteria and plants, and is named for alr4036 from Nostoc sp. PCC 7120. The family consists mostly of proteins from species that lack the capability to synthesize F420, so it is probable that all members bind FMN rather than F420 [Unknown function, Enzymes of unknown specificity]. Length = 185

>gnl|CDD|221760 pfam12766, Pyridox_oxase_2, Pyridoxamine 5'-phosphate oxidase

 Score = 44.5 bits (106), Expect = 4e-07
 Identities = 11/22 (50%), Positives = 14/22 (63%)

Query: 5  ICWYFTESWDQFRINGRVDVID 26
           CWYF ++ +QFRI G   VI 
Sbjct: 77 ACWYFPDTREQFRIRGTAFVIG 98

Pyridoxamine 5'-phosphate oxidase catalyzes the oxidation of pyridoxamine-5-P (PMP) and pyridoxine-5-P (PNP) to pyridoxal-5-P (PLP), the terminal step in the de novo biosynthesis of PLP in Escherichia coli and part of the salvage pathway of this coenzyme in both E. coli and mammalian cells. This region is the flavoprotein FMN-binding domain. Length = 98

>gnl|CDD|227464 COG5135, COG5135, Uncharacterized conserved protein [Function unknown]

 Score = 44.7 bits (105), Expect = 2e-06
 Identities = 27/157 (17%), Positives = 54/157 (34%), Gaps = 37/157 (23%)

Query: 4   QICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMK-ARLQY--------- 53
           + C+YF E+W+Q+RI+G+  +I              ++    + +  R            
Sbjct: 90  EACFYFPETWEQYRISGQCFLISKQFKYDIFSPAFSETNDDLTDEEIRTPINWDDDDDKR 149

Query: 54  -------------------LDPEQGCPSVNEQPKEFSLDPCAGPVDA-------FCVLIL 87
                              L   Q        P +      +  +D        F ++ L
Sbjct: 150 NIENDEHHEDEADFYPPPQLSRHQKSLYRKPAPGQKLTSETSKQLDKLHAGLENFGLVCL 209

Query: 88  DPDQVDYLNLKSNQKLKFMSRLSDNGEKYWASLKTSP 124
           + D VD+LNLK     +++ +  D+ +  W   + +P
Sbjct: 210 EVDSVDFLNLKGRPGERWLFQ-RDDNKDLWEEQEVNP 245

Length = 245

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	126
COG5135	245	Uncharacterized conserved protein [Function unknow	99.91
KOG4558	251	consensus Uncharacterized conserved protein [Funct	99.9
PRK05679	195	pyridoxamine 5'-phosphate oxidase; Provisional	99.83
TIGR00558	217	pdxH pyridoxamine-phosphate oxidase. This model is	99.83
PLN03049	462	pyridoxine (pyridoxamine) 5'-phosphate oxidase; Pr	99.61
PLN02918	544	pyridoxine (pyridoxamine) 5'-phosphate oxidase	99.21
COG0259	214	PdxH Pyridoxamine-phosphate oxidase [Coenzyme meta	99.14
KOG2586	228	consensus Pyridoxamine-phosphate oxidase [Coenzyme	98.55
PF10590	42	PNPOx_C: Pyridoxine 5'-phosphate oxidase C-termina	97.82
TIGR03667	130	Rv3369 PPOX class probable F420-dependent enzyme,	96.03
TIGR03618	117	Rv1155_F420 PPOX class probable F420-dependent enz	95.69

>COG5135 Uncharacterized conserved protein [Function unknown]

Probab=99.91  E-value=2.6e-25  Score=164.47  Aligned_cols=117  Identities=24%  Similarity=0.477  Sum_probs=90.8

Q ss_pred             EEEEEEECCCCeeEEEEEEEEEEcCCCC------------------------ChHHHHHHHHHHhcCCHHHHhccCCCC-
Q 033147            3 HQICWYFTESWDQFRINGRVDVIDGSNS------------------------DPEKLQIREKSWFGCSMKARLQYLDPE-   57 (126)
Q Consensus         3 ~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~------------------------~~~~~~~r~~~W~~ls~~~R~~y~~p~-   57 (126)
                      +|+|||||+|++||||+|++.+++.+-.                        .++|...+.++|+--+++.++.|..|+ 
T Consensus        89 fEaC~yfP~T~eQ~RisGQ~~l~s~~~~~~~~~Pa~~~t~d~l~~~~~r~p~~w~~~~~~r~i~~~~~~Ed~a~f~ppP~  168 (245)
T COG5135          89 FEACFYFPETWEQYRISGQCFLISKQFKYDIFSPAFSETNDDLTDEEIRTPINWDDDDDKRNIENDEHHEDEADFYPPPQ  168 (245)
T ss_pred             HHHHhcccchhhheEeeeeEEEEchhhcCcccCchhhhhhhhhccccccCcccCCCchhccccccccCccchhhcCCCCC
Confidence            5999999999999999999999986522                        124567778899988888888876544 


Q ss_pred             -------------CCCcCCCCCCCCCCCCCCCCCCCcEEEEEEeccEEEeEEec--CCceEEEEeecCCCCCCCeEEEEc
Q 033147           58 -------------QGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNLK--SNQKLKFMSRLSDNGEKYWASLKT  122 (126)
Q Consensus        58 -------------PG~~~~~~~~~~~~~d~~~~~~~nF~vl~~~p~~VD~L~L~--~h~R~~f~~~~~~~~~~~W~~~~l  122 (126)
                                   ||+.+..++.+.  ++.-..|.+||++|+|++++||+|+|+  |..|++|.++.+   .+.|++++|
T Consensus       169 ~s~~q~~~~~~P~P~~~~~~e~~~~--l~~~~~~~~~F~lv~le~~~VdfLnL~g~pg~R~l~~rd~n---~~~W~~q~V  243 (245)
T COG5135         169 LSRHQKSLYRKPAPGQKLTSETSKQ--LDKLHAGLENFGLVCLEVDSVDFLNLKGRPGERWLFQRDDN---KDLWEEQEV  243 (245)
T ss_pred             CCcccccccccCCCcccccccChhh--HHHHHhhhcceeEEEeecCceeeeeecCCCCceeeEeccCC---cchhhcccc
Confidence                         444443333222  233345899999999999999999999  689999998644   468999999


Q ss_pred             cC
Q 033147          123 SP  124 (126)
Q Consensus       123 ~P  124 (126)
                      ||
T Consensus       244 np  245 (245)
T COG5135         244 NP  245 (245)
T ss_pred             CC
Confidence            98

>KOG4558 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.90  E-value=1.3e-23  Score=155.93  Aligned_cols=118  Identities=27%  Similarity=0.522  Sum_probs=85.0

Q ss_pred             EEEEEEECCCCeeEEEEEEEEEEcCC----------CC--------------ChHHHHHHHHHHhcCCHHHHhccC----
Q 033147            3 HQICWYFTESWDQFRINGRVDVIDGS----------NS--------------DPEKLQIREKSWFGCSMKARLQYL----   54 (126)
Q Consensus         3 ~E~~wy~~~t~~Q~Ri~G~~~ii~~~----------~~--------------~~~~~~~r~~~W~~ls~~~R~~y~----   54 (126)
                      .|+|||||+|++||||+|++.+|+.+          +.              +..|+.+|. +|...|+..|+.|+    
T Consensus        95 femC~yfp~TweQ~RisGqi~~it~~~~d~~~~dAdn~dq~~l~~s~~~I~~d~~~e~e~~-~~~~~~~~~~~~~~~~~s  173 (251)
T KOG4558|consen   95 FEMCGYFPKTWEQIRISGQIWLITPELADRNEFDADNLDQDHLINSNGRIPEDWSWEEERR-IWELHSPELRASFSTPPS  173 (251)
T ss_pred             cceeeeechhhhheEecceEEEEcccccccccCCccccchHHHhhhhccccccccchhhhc-ccccCCHHHHHhhcCCcc
Confidence            69999999999999999999999432          11              123555654 77777777776665    


Q ss_pred             ----------CCCCCCcCCCCCCCCCCCCCCCCCCCcEEEEEEeccEEEeEEecC-CceEEEEeecCCCCCCCeEEEEcc
Q 033147           55 ----------DPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNLKS-NQKLKFMSRLSDNGEKYWASLKTS  123 (126)
Q Consensus        55 ----------~p~PG~~~~~~~~~~~~~d~~~~~~~nF~vl~~~p~~VD~L~L~~-h~R~~f~~~~~~~~~~~W~~~~l~  123 (126)
                                .|.||+-...++..  .+..-+.+.+||++|+|++++||||+|++ ..|.++... .|.+++.|++++||
T Consensus       174 ~sk~~~~~~~~P~pg~~~~~e~~~--~~~~~~~~~~~f~lv~le~~~VdfLNLk~~~gr~~~~~~-~g~~ek~W~s~~Vn  250 (251)
T KOG4558|consen  174 YSKYQGDVKVSPLPGTLTGKEDPG--VIEAWKTAWGRFSLVVLEANEVDFLNLKPPPGRKRVLHN-RGLNEKQWSSTRVN  250 (251)
T ss_pred             hhhccCceeecCCCCccccccCcc--chhhhhccccceeEEEEeccccceeeccCCCcceEEEec-cCCCcccccccccC
Confidence                      36677665544421  12223458999999999999999999994 445666543 33457899999999


Q ss_pred             C
Q 033147          124 P  124 (126)
Q Consensus       124 P  124 (126)
                      |
T Consensus       251 p  251 (251)
T KOG4558|consen  251 P  251 (251)
T ss_pred             C
Confidence            8

>PRK05679 pyridoxamine 5'-phosphate oxidase; Provisional

Probab=99.83  E-value=2.5e-20  Score=138.92  Aligned_cols=109  Identities=10%  Similarity=0.171  Sum_probs=88.9

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCC-CCCCCcCCCCCCC-----CC---CC
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLD-PEQGCPSVNEQPK-----EF---SL   72 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~-p~PG~~~~~~~~~-----~~---~~   72 (126)
                      .|++|||+++++.|+||+|++++++++        ...++|.+++..+|.. .| ++||+++.+....     ..   ..
T Consensus        75 ~val~~~~~~~~~qvrv~G~a~~~~~~--------~~~~~w~~~p~~~r~~-~~~~~qg~~i~~~~~~~~~~~~~~~~~~  145 (195)
T PRK05679         75 KAALLFPWKSLERQVRVEGRVEKVSAE--------ESDAYFASRPRGSQIG-AWASKQSRPISSRAALEAKFAEVKAKFA  145 (195)
T ss_pred             cEEEEEecCCCCEEEEEEEEEEEeCHH--------HHHHHHHhCCHhhhce-eeeCCCCCccCCHHHHHHHHHHHHhhcc
Confidence            489999999999999999999998765        3468999999999987 76 4789999764321     00   01


Q ss_pred             CCCCCCCCcEEEEEEeccEEEeEEec---CCceEEEEeecCCCCCCCeEEEEccC
Q 033147           73 DPCAGPVDAFCVLILDPDQVDYLNLK---SNQKLKFMSRLSDNGEKYWASLKTSP  124 (126)
Q Consensus        73 d~~~~~~~nF~vl~~~p~~VD~L~L~---~h~R~~f~~~~~~~~~~~W~~~~l~P  124 (126)
                      +...++++||||+.|.|++||||+|+   +|+|++|.+.     +++|+.+.|||
T Consensus       146 ~~~~~~p~~f~~~~l~p~~veflql~~~r~H~R~~y~~~-----~~~W~~~~l~P  195 (195)
T PRK05679        146 QGEVPRPPHWGGYRVVPESIEFWQGRPSRLHDRILYRRD-----DGGWKIERLAP  195 (195)
T ss_pred             CCCCCCCCccEEEEEECCEEEEcCCCCCCCcceEEEEEC-----CCCEEEEEeCC
Confidence            22346799999999999999999998   4999999974     24799999998

>TIGR00558 pdxH pyridoxamine-phosphate oxidase

Probab=99.83  E-value=3.1e-20  Score=140.58  Aligned_cols=109  Identities=12%  Similarity=0.213  Sum_probs=87.5

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCC-CCCCcCCCCCCCC--------CCC
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDP-EQGCPSVNEQPKE--------FSL   72 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p-~PG~~~~~~~~~~--------~~~   72 (126)
                      .|++|||+++++.|+||+|+|.+++++        ...++|++++..+|.. .++ +||+++.+.....        ...
T Consensus        97 ~v~l~f~~~~~~~qvrv~G~a~~~~~~--------~~~~~w~~~~~~sr~~-~~~~~q~~~~~~~~~l~~~~~~~~~~~~  167 (217)
T TIGR00558        97 NAALVFFWPDLERQVRVEGKVEKLPRE--------ESDAYFKSRPRGSRIG-AWASRQSDVISNREELESKALKNTEKFE  167 (217)
T ss_pred             cEEEEEEeCCCCEEEEEEEEEEECCHH--------HHHHHHHhCChhhcce-EEcCCCCcccCCHHHHHHHHHHHHhhcc
Confidence            379999999999999999999997764        3468999998888887 765 8999987542100        001


Q ss_pred             CCCCCCCCcEEEEEEeccEEEeEEec---CCceEEEEeecCCCCCCCeEEEEccC
Q 033147           73 DPCAGPVDAFCVLILDPDQVDYLNLK---SNQKLKFMSRLSDNGEKYWASLKTSP  124 (126)
Q Consensus        73 d~~~~~~~nF~vl~~~p~~VD~L~L~---~h~R~~f~~~~~~~~~~~W~~~~l~P  124 (126)
                      +...+.++||||+.|.|++||||+|+   +|+|++|.+.     +++|..++|+|
T Consensus       168 ~~~~p~p~~f~~~~l~p~~vEf~~l~~~r~H~R~~y~~~-----~~~W~~~~l~P  217 (217)
T TIGR00558       168 DAEIPRPDYWGGYRVVPEEIEFWQGRPSRLHDRFVYRRE-----NDPWKRVRLAP  217 (217)
T ss_pred             CCCCCCCCceEEEEEECCEEEEccCCCCCCceEEEEEec-----CCCEEEEEeCC
Confidence            12245799999999999999999998   4999999974     25799999998

This model is similar to Pyridox_oxidase from PFAM but is designed to find only true pyridoxamine-phosphate oxidase and to ignore the related protein PhzG involved in phenazine biosynthesis. This protein from E. coli was characterized as a homodimer with two FMN per dimer.

>PLN03049 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional

Probab=99.61  E-value=1.9e-15  Score=125.37  Aligned_cols=114  Identities=11%  Similarity=0.278  Sum_probs=88.0

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHh----ccCC-CCCCCcCCCCCCC----CCCC
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARL----QYLD-PEQGCPSVNEQPK----EFSL   72 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~----~y~~-p~PG~~~~~~~~~----~~~~   72 (126)
                      .|++|||+|..+.|+||+|+++.++++        +..++|++.+..+|.    +|.. +.||.+.-.....    ....
T Consensus       337 ~aal~F~w~~~~rQvRv~G~a~~~~~~--------~s~~yf~~rp~~sq~~a~as~qs~~i~~~~~l~~~~~~~~~~~~~  408 (462)
T PLN03049        337 KASLVFYWDGLHRQVRVEGSVEKVSEE--------ESDQYFHSRPRGSQIGALVSKQSTVIPGRHILDQSYKELEAKYAD  408 (462)
T ss_pred             cEEEEeecCCCCEEEEEEEEEEECCHH--------HHHHHHHhCChhhhhhheeCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence            479999999999999999999999844        457899999999999    8874 6788776322110    0001


Q ss_pred             CCCCCCCCcEEEEEEeccEEEeEEec---CCceEEEEeecCCCCCCCeEEEEccC
Q 033147           73 DPCAGPVDAFCVLILDPDQVDYLNLK---SNQKLKFMSRLSDNGEKYWASLKTSP  124 (126)
Q Consensus        73 d~~~~~~~nF~vl~~~p~~VD~L~L~---~h~R~~f~~~~~~~~~~~W~~~~l~P  124 (126)
                      +...+.++||+++.|.|++||||+++   .|+|++|.+...+ +.+.|..+.|+|
T Consensus       409 ~~~~p~p~~w~g~~v~p~~iEfwq~~~~rlHdR~~y~~~~~~-~~~~W~~~rl~P  462 (462)
T PLN03049        409 SSAIPKPKHWGGYRLKPELIEFWQGRESRLHDRLQYTREEIN-GKSVWKIDRLAP  462 (462)
T ss_pred             CCCCCCCCceEEEEEEeeEEEEccCCCCCCeeEEEEEecCCC-CCCCEEEEEeCC
Confidence            12346899999999999999999998   4999999984211 124599999998

>PLN02918 pyridoxine (pyridoxamine) 5'-phosphate oxidase

Probab=99.21  E-value=3.5e-11  Score=101.46  Aligned_cols=114  Identities=15%  Similarity=0.249  Sum_probs=83.0

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCC-----C---CCC
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKE-----F---SLD   73 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~-----~---~~d   73 (126)
                      .|++|||+++++.|+||+|.+++++++..        .++|..-+..+|...-...-++++.+.+...     .   -.+
T Consensus       419 ~aal~F~w~~l~rQVRi~G~v~~~~~~es--------~~yf~sRp~~Sqi~A~aS~QS~~i~~r~~L~~~~~~~~~~~~~  490 (544)
T PLN02918        419 SAALLFYWEELNRQVRVEGSVQKVPESES--------ENYFHSRPRGSQIGAIVSKQSSVVPGRHVLYQEYKELEKKYSD  490 (544)
T ss_pred             cEEEEeeeccccEEEEEEEEEEECCHHHH--------HHHHHhCCccccceEEecCCCCcCCCHHHHHHHHHHHHHHhcC
Confidence            47999999999999999999999988744        4677776666666544344555665522100     0   011


Q ss_pred             CC-CCCCCcEEEEEEeccEEEeEEec---CCceEEEEeecCCCCCCCeEEEEccC
Q 033147           74 PC-AGPVDAFCVLILDPDQVDYLNLK---SNQKLKFMSRLSDNGEKYWASLKTSP  124 (126)
Q Consensus        74 ~~-~~~~~nF~vl~~~p~~VD~L~L~---~h~R~~f~~~~~~~~~~~W~~~~l~P  124 (126)
                      .. .+-|++|+...|.|++||+++-+   -|.|.+|.+..++ +.+.|..+.|+|
T Consensus       491 ~~~vp~P~~WgGy~v~P~~iEFWQgr~~RLHdR~~Y~r~~~~-~~~~W~~~rL~P  544 (544)
T PLN02918        491 GSVIPKPKNWGGYRLKPNLFEFWQGQQSRLHDRLQYSLQEVN-GKPVWKIHRLAP  544 (544)
T ss_pred             CCCCCCCCCceeEEEecCEEEECCCCCCCccceEEEEecCCC-CCCCeEEEEeCC
Confidence            11 35689999999999999999998   3999999984321 124599999998

>COG0259 PdxH Pyridoxamine-phosphate oxidase [Coenzyme metabolism]

Probab=99.14  E-value=3.2e-11  Score=90.04  Aligned_cols=106  Identities=17%  Similarity=0.294  Sum_probs=81.2

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHH----HHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCC--------
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKL----QIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKE--------   69 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~----~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~--------   69 (126)
                      .+.+|||++..+.|+||.|.+..|++...+.+|.    +.+..+|.  |+.++          +|.+.....        
T Consensus        94 ~Aal~F~W~~L~RQVrv~G~ve~vs~eesd~Yf~sRPr~S~iGAWA--S~QS~----------~i~~r~~Le~~~ae~~~  161 (214)
T COG0259          94 YAALLFPWKELERQVRVEGRVERVSDEESDAYFASRPRGSQIGAWA--SKQSR----------PIASRAALEAKVAELTA  161 (214)
T ss_pred             ceeEEecchhccceEEEeeeeeeCCHHHHHHHHhcCCCcCccchhh--ccCcc----------ccCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999988776662    45667773  56666          665522110        


Q ss_pred             CCCCCCCCCCCcEEEEEEeccEEEeEEecC---CceEEEEeecCCCCCCCeEEEEccC
Q 033147           70 FSLDPCAGPVDAFCVLILDPDQVDYLNLKS---NQKLKFMSRLSDNGEKYWASLKTSP  124 (126)
Q Consensus        70 ~~~d~~~~~~~nF~vl~~~p~~VD~L~L~~---h~R~~f~~~~~~~~~~~W~~~~l~P  124 (126)
                      .-.+..-+-|++++...|.|..||+++-++   |.|.+|++.     +++|....|.|
T Consensus       162 kf~~~~iP~P~~WgG~ri~p~~iEFWqgr~~RLHdR~~y~r~-----~g~W~~~RL~P  214 (214)
T COG0259         162 KFADGEIPRPPHWGGFRIVPESIEFWQGRPSRLHDRLRYRRD-----DGGWKIERLAP  214 (214)
T ss_pred             hcCCCCCCCCCCccceEeeeeEEEEecCCCccceeeEEEeec-----CCCeEEEecCC
Confidence            001222246899999999999999999984   999999986     26899999987

>KOG2586 consensus Pyridoxamine-phosphate oxidase [Coenzyme transport and metabolism]

Probab=98.55  E-value=1.8e-07  Score=70.12  Aligned_cols=112  Identities=13%  Similarity=0.216  Sum_probs=77.8

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCC--------CCCC
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKE--------FSLD   73 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~--------~~~d   73 (126)
                      .+-|+||++....|+|+.|.+.-++....        +++|.+=+-.+|--=-.-+-|++|...+...        .-.+
T Consensus       105 ~Aal~Fyw~~l~rQVRveG~ve~l~~ee~--------e~yf~srp~~SqIga~~s~qs~vI~~re~l~k~~e~l~~~~~~  176 (228)
T KOG2586|consen  105 NAALLFYWEDLNRQVRVEGIVEKLPREEA--------EAYFKSRPRASQIGAWASPQSEVIPDREELEKKDEELTELFGD  176 (228)
T ss_pred             cceEEEeehhccceeEEEeccccCCHHHH--------HHHHhcCcchhhccceecCCCCccCCHHHHHHHHHHHHHHhcc
Confidence            36799999999999999998887776643        5677654444442111124455665432111        0122


Q ss_pred             -CCCCCCCcEEEEEEeccEEEeEEec---CCceEEEEeecCCCCCCCeEEEEccC
Q 033147           74 -PCAGPVDAFCVLILDPDQVDYLNLK---SNQKLKFMSRLSDNGEKYWASLKTSP  124 (126)
Q Consensus        74 -~~~~~~~nF~vl~~~p~~VD~L~L~---~h~R~~f~~~~~~~~~~~W~~~~l~P  124 (126)
                       ..-+.|++++-+.|.|.++|+++..   -|.|..|++...   ++.|....|.|
T Consensus       177 ~~~IpkP~swgg~rl~P~~~EFwQg~~~rLhDR~~yr~~~~---d~~Wk~~rlap  228 (228)
T KOG2586|consen  177 EQSIPKPDSWGGYRLVPQEFEFWQGQPDRLHDRIVYRRLTV---DEDWKLVRLAP  228 (228)
T ss_pred             cccccCCCcccceEEeeeeehhhcCCchhhhheEEEecccC---CCCeeEEecCC
Confidence             2235799999999999999999987   399999995433   36899999987

>PF10590 PNPOx_C: Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; InterPro: IPR019576 Pyridoxamine 5'-phosphate oxidase (1

Probab=97.82  E-value=0.0001  Score=42.25  Aligned_cols=38  Identities=11%  Similarity=0.358  Sum_probs=31.8

Q ss_pred             EEEEEeccEEEeEEec---CCceEEEEeecCCCCCCCeEEEEccC
Q 033147           83 CVLILDPDQVDYLNLK---SNQKLKFMSRLSDNGEKYWASLKTSP  124 (126)
Q Consensus        83 ~vl~~~p~~VD~L~L~---~h~R~~f~~~~~~~~~~~W~~~~l~P  124 (126)
                      +...|.|++||+.+-+   -|.|.+|++..+    +.|+.+.|.|
T Consensus         2 gGy~l~P~~iEFWqg~~~RlHdR~~y~r~~~----~~W~~~rL~P   42 (42)
T PF10590_consen    2 GGYRLVPEEIEFWQGRPDRLHDRIRYTRDED----GGWTKERLQP   42 (42)
T ss_dssp             EEEEEEECEEEEEEEETTSEEEEEEEEEETT----TCEEEEEE-T
T ss_pred             CeEEEEcCEEEEeCCCCCCCEEEEEEEecCC----CCEEEEEEcC
Confidence            5678899999999998   399999999644    4799999998

4.3.5 from EC) is an enzyme that is involved in the de novo synthesis of pyridoxine (vitamin B6) and pyridoxal phosphate. It oxidizes pyridoxamine-5-P (PMP) and pyridoxine-5-P (PNP) to pyridoxal-5-P. The enzyme requires the presence of flavin mononucleotide (FMN) as a cofactor, although there is some evidence that coenzyme F420 may perform this role in some species []. The sequences of the enzyme from bacterial (genes pdxH or fprA) [] and fungal (gene PDX3) [] sources show that this protein has been highly conserved throughout evolution. PdxH is evolutionary related [] to one of the enzymes in the phenazine biosynthesis protein pathway, phzD (also known as phzG). This entry represents one of the two dimerisation regions of the protein, located at the edge of the dimer interface, at the C terminus, being the last three beta strands, S6, S7, and S8 along with the last three residues to the end. In P21159 from SWISSPROT, S6 runs from residues 178-192, S7 from 200-206 and S8 from 211-215. the extended loop, of residues 167-177 may well be involved in the pocket formed between the two dimers that positions the FMN molecule []. ; GO: 0016638 oxidoreductase activity, acting on the CH-NH2 group of donors, 0055114 oxidation-reduction process; PDB: 1WV4_B 1DNL_A 1G76_A 1G79_A 1G77_A 1JNW_A 1G78_A 1TY9_A 1CI0_A 1NRG_A ....

>TIGR03667 Rv3369 PPOX class probable F420-dependent enzyme, Rv3369 family

Probab=96.03  E-value=0.021  Score=39.64  Aligned_cols=47  Identities=9%  Similarity=-0.056  Sum_probs=35.7

Q ss_pred             eEEEEEEECCC-CeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhc
Q 033147            2 MHQICWYFTES-WDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQ   52 (126)
Q Consensus         2 ~~E~~wy~~~t-~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~   52 (126)
                      .|+++|+++.. ..|++|+|++.++++....    ....++|++.++.++..
T Consensus        61 ~Vsl~~~~~~~~~~~v~v~G~a~i~~d~~~~----~~~~~~~~~y~~~~~~~  108 (130)
T TIGR03667        61 RVSLHLNSDGRGGDVVVFTGTAEVVADAPPA----REIPAYLAKYREDAARI  108 (130)
T ss_pred             cEEEEEEcCCCCceEEEEEEEEEEeCCchhH----HHHHHHHHHhhHHHhcC
Confidence            37899999665 4899999999999876432    23467899888877754

A Genome Properties metabolic reconstruction for F420 biosynthesis shows that slightly over 10 percent of all prokaryotes with fully sequenced genomes, including about two thirds of the Actinomycetales, make F420. A variant of the Partial Phylogenetic Profiling algorithm, SIMBAL, shows that this protein likely binds F420 in a cleft similar to that in which the homologous enzyme pyridoxamine phosphate oxidase (PPOX) binds FMN.

>TIGR03618 Rv1155_F420 PPOX class probable F420-dependent enzyme

Probab=95.69  E-value=0.094  Score=34.91  Aligned_cols=28  Identities=4%  Similarity=0.113  Sum_probs=23.8

Q ss_pred             eEEEEEEECCCC-eeEEEEEEEEEEcCCC
Q 033147            2 MHQICWYFTESW-DQFRINGRVDVIDGSN   29 (126)
Q Consensus         2 ~~E~~wy~~~t~-~Q~Ri~G~~~ii~~~~   29 (126)
                      .|.++++.+... .+++|+|+++++.++.
T Consensus        46 ~v~l~~~~~~~~~~~v~i~G~a~~v~d~~   74 (117)
T TIGR03618        46 RVSLSVLDPDFPYRYVEVEGTAELVEDPD   74 (117)
T ss_pred             eEEEEEECCCCCccEEEEEEEEEEecCCc
Confidence            367899998876 7999999999998764

A Genome Properties metabolic reconstruction for F420 biosynthesis shows that slightly over 10 percent of all prokaryotes with fully sequenced genomes, including about two thirds of the Actinomyces, make F420. The Partial Phylogenetic Profiling algorithm identifies this members of this protein family as high-scoring proteins to the F420 biosynthesis profile. A member of this family, Rv1155, was crytallized after expression in Escherichia coli, which does not synthesize F420; the crystal structure shown to resemble FMN-binding proteins, but with a recognizable empty cleft corresponding to, yet differing profounding from, the FMN site of pyridoxine 5'-phosphate oxidase. We propose that this protein family consists of F420-binding enzymes.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	126
2i51_A	195	Crystal Structure Of A Pyridoxamine 5'-Phosphate Ox		1e-11

>pdb|2I51|A Chain A, Crystal Structure Of A Pyridoxamine 5'-Phosphate Oxidase-Related, Fmn Binding Protein (Npun_f5749) From Nostoc Punctiforme Pcc 73102 At 1.40 A Resolution Length = 195

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 4   QICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSV 63
           +ICWYF  + +QFR  G + +I   +S  +    R   W   S  ARLQ+  P  G P +
Sbjct: 76  EICWYFPNTREQFRXAGDLTLISSDDSHQDLQPARIAXWQELSDAARLQFGWPYPGKPRI 135
Query: 64  NEQPKEFSLDP--CAGPVDAFCVLILDPDQVDYLNLKSNQKLKFMSRLSDNGEKYWASLK 121
            E    F   P     PV  FC+L+LDP QVD+L L+   + +++   +D  E  W+S  
Sbjct: 136 KES-GAFEPSPPDPIEPVPNFCLLLLDPVQVDHLELRGEPQNRWLYHRNDQQE--WSSEA 192
Query: 122 TSP 124
            +P
Sbjct: 193 INP 195

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	126
2i51_A	195	Uncharacterized conserved protein of COG5135; pyri	2e-18

>2i51_A Uncharacterized conserved protein of COG5135; pyridoxamine 5'-phosphate oxidase-related protein, structura genomics; HET: MSE FMN; 1.40A {Nostoc punctiforme} Length = 195

 Score = 75.6 bits (186), Expect = 2e-18
 Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 1/111 (0%)

Query: 5   ICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVN 64
           ICWYF  + +QFR+ G + +I   +S  +    R   W   S  ARLQ+  P  G P + 
Sbjct: 77  ICWYFPNTREQFRMAGDLTLISSDDSHQDLQPARIAMWQELSDAARLQFGWPYPGKPRIK 136

Query: 65  EQ-PKEFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFMSRLSDNGE 114
           E    E S      PV  FC+L+LDP QVD+L L+   + +++   +D  E
Sbjct: 137 ESGAFEPSPPDPIEPVPNFCLLLLDPVQVDHLELRGEPQNRWLYHRNDQQE 187

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	126
2i51_A	195	Uncharacterized conserved protein of COG5135; pyri	99.91
2ou5_A	175	Pyridoxamine 5'-phosphate oxidase-related, FMN-BI;	99.83
1dnl_A	199	Pyridoxine 5'-phosphate oxidase; beta barrel, prot	99.68
1ci0_A	228	Protein (PNP oxidase); B6 metabolism, structural g	99.61
1nrg_A	261	Pyridoxine 5'-phosphate oxidase; PLP, FMN, oxidore	99.6
1ty9_A	222	Phenazine biosynthesis protein PHZG; chorismate, o	99.53
2a2j_A	246	Pyridoxamine 5'-phosphate oxidase; beta barrel, st	99.45
2ig6_A	150	NIMC/NIMA family protein; structural genomics, joi	98.06
2qea_A	160	Putative general stress protein 26; structural gen	97.98
3dmb_A	147	Putative general stress protein 26 with A PNP-OXI	97.94
2hhz_A	150	Pyridoxamine 5'-phosphate oxidase-related; structu	97.93
2re7_A	134	Uncharacterized protein; general stress protein CO	97.83
3u35_A	182	General stress protein; PNP-oxidase like fold, FMN	97.67
2i02_A	148	General stress protein of COG3871; pyridoxamine 5'	97.63
2hq7_A	146	Protein, related to general stress protein 26(GS2	97.24
3ec6_A	139	General stress protein 26; alpha-beta structure, s	97.03
3db0_A	128	LIN2891 protein; putative pyridoxamine 5'-phosphat	96.4
2fhq_A	141	Putative general stress protein; alpha-beta struct	96.3
2iab_A	155	Hypothetical protein; NP_828636.1, structural geno	95.39
3ba3_A	145	Protein LP_0091, pyridoxamine 5'-phosphate oxidase	94.45
2htd_A	140	Predicted flavin-nucleotide-binding protein from f	93.75
1vl7_A	157	Hypothetical protein ALR5027; structural genomics,	93.59
1rfe_A	162	Hypothetical protein RV2991; structural genomics,	92.02
3f7e_A	131	Pyridoxamine 5'-phosphate oxidase-related, FMN- bi	90.95
2asf_A	137	Hypothetical protein RV2074; H37RV, structural gen	86.05

>2i51_A Uncharacterized conserved protein of COG5135; pyridoxamine 5'-phosphate oxidase-related protein, structura genomics; HET: MSE FMN; 1.40A {Nostoc punctiforme}

Probab=99.91  E-value=1.8e-23  Score=154.49  Aligned_cols=119  Identities=34%  Similarity=0.585  Sum_probs=101.4

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCC-CCCCCCCCCCCC
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPK-EFSLDPCAGPVD   80 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~-~~~~d~~~~~~~   80 (126)
                      .|++|||+++...|+||+|+|.+++++..+.+|+.+|.++|++.+..+|.+|.||.||+++...... ........+.++
T Consensus        74 ~v~l~f~~~~~~~qvri~G~a~~v~~~~~~~~~~~~r~~~w~~~~~~sr~~~~~~spg~~~~~~~~~~~~~~~~~~p~p~  153 (195)
T 2i51_A           74 WAEICWYFPNTREQFRMAGDLTLISSDDSHQDLQPARIAMWQELSDAARLQFGWPYPGKPRIKESGAFEPSPPDPIEPVP  153 (195)
T ss_dssp             EEEEEEEETTTTEEEEEEEEEEEECSSSTTGGGHHHHHHHHHHSCHHHHHGGGSCCTTSBCCCCGGGGCCCCCCSSSCCT
T ss_pred             eEEEEEEeCCCCEEEEEEEEEEEEChHHhhhhhHHHHHHHHHhCChhhhhhcccCCCCCCccchhHHhhhhccCCCCCCC
Confidence            4899999999999999999999999998888999999999999999999999999999999643311 101112346789


Q ss_pred             cEEEEEEeccEEEeEEec--CCceEEEEeecCCCCCCCeEEEEccC
Q 033147           81 AFCVLILDPDQVDYLNLK--SNQKLKFMSRLSDNGEKYWASLKTSP  124 (126)
Q Consensus        81 nF~vl~~~p~~VD~L~L~--~h~R~~f~~~~~~~~~~~W~~~~l~P  124 (126)
                      ||++++|.|++||+++++  .|+|.+|++..+    ++|..++|+|
T Consensus       154 ~w~~~~v~P~~iefwq~~~~rh~R~~y~~~~~----~~W~~~rl~P  195 (195)
T 2i51_A          154 NFCLLLLDPVQVDHLELRGEPQNRWLYHRNDQ----QEWSSEAINP  195 (195)
T ss_dssp             TEEEEEEEEEEEEEEESSSSSCEEEEEEECTT----SCEEEEEBCC
T ss_pred             ceEEEEEEccEEEEEecCCCCceEEEEEECCC----CCEEEEEeCC
Confidence            999999999999999998  589999998433    4799999998

>2ou5_A Pyridoxamine 5'-phosphate oxidase-related, FMN-BI; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: MSE FMN; 1.60A {Jannaschia SP}

Probab=99.83  E-value=5.8e-20  Score=133.64  Aligned_cols=97  Identities=21%  Similarity=0.339  Sum_probs=87.0

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCc
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDA   81 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~n   81 (126)
                      .|++|||+++...|+||+|+|++++++          .++|+.+++.+|..|.++.||+++.+  .  +     .+.++|
T Consensus        78 ~v~l~f~~~~~~~qvri~G~a~~~~d~----------~~~w~~~~~~~~~~~~~~~~~~~~~~--~--l-----~~~p~~  138 (175)
T 2ou5_A           78 RVAIHIWIPKASLQVRAKAIAKILPGD----------PNLFAQLPEAARMNYQGPVPGTPLPA--E--P-----DATPNR  138 (175)
T ss_dssp             EEEEEEEEGGGTEEEEEEEEEEEEECC----------HHHHHHSCHHHHGGGSSSCTTCBSSC--C--C-----CCCSCC
T ss_pred             cEEEEEEeCCCCEEEEEEEEEEEeCcH----------HHHHHHCCHhHHhcccCCCCCCcccc--c--c-----CCCCCc
Confidence            489999999999999999999999988          57999999999999988999999966  1  1     357899


Q ss_pred             EEEEEEeccEEEeEEec-CCceEEEEeecCCCCCCCeEEEEccC
Q 033147           82 FCVLILDPDQVDYLNLK-SNQKLKFMSRLSDNGEKYWASLKTSP  124 (126)
Q Consensus        82 F~vl~~~p~~VD~L~L~-~h~R~~f~~~~~~~~~~~W~~~~l~P  124 (126)
                      |+|+.|.|++|||++++ +|+|++|++.      + |..++|+|
T Consensus       139 ~~~~~v~p~~vefw~~~~~h~R~~y~~~------~-W~~~~l~P  175 (175)
T 2ou5_A          139 FTRLICHLSEIDVLHLTTPHQRAVYTAP------D-WRGIWVSP  175 (175)
T ss_dssp             EEEEEEEEEEEEEEECCSSCEEEEEETT------T-CCCEEECC
T ss_pred             EEEEEEEeeEEEEEeCCCCceEEEEEcC------C-ceEEEecC
Confidence            99999999999999998 5899999872      3 99999998

>1dnl_A Pyridoxine 5'-phosphate oxidase; beta barrel, protein-FMN complex, oxidoreductase; HET: MSE FMN; 1.80A {Escherichia coli K12} SCOP: b.45.1.1 PDB: 1g79_A* 1g76_A* 1g78_A* 1g77_A* 1jnw_A* 1wv4_A*

Probab=99.68  E-value=1.2e-16  Score=118.11  Aligned_cols=110  Identities=6%  Similarity=0.049  Sum_probs=86.0

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCC--------CCCCC
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPK--------EFSLD   73 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~--------~~~~d   73 (126)
                      .|++|||+++...|+||+|+|++++++.        ..++|++.+..+|..+-..++|+++.+....        ..-.+
T Consensus        79 ~v~l~f~~~~~~~qvri~G~a~~v~d~~--------~~~~w~~~p~~s~~~aw~s~qs~~i~~r~~l~~~~~~~~~~~~~  150 (199)
T 1dnl_A           79 RVSLLFPWHTLERQVMVIGKAERLSTLE--------VMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQ  150 (199)
T ss_dssp             EEEEEECCGGGTEEEEEEEEEEECCHHH--------HHHHHTTSCHHHHHHHHHCCTTSCCSCTHHHHHHHHHHHHHSTT
T ss_pred             eEEEEEEcCCCCEEEEEEEEEEEeCCcc--------HHHHHHhCChhhhcccccCCCCcccCCHHHHHHHHHHHHhhccC
Confidence            4899999999999999999999998752        3689999987777765445788888764210        00011


Q ss_pred             CCCCCCCcEEEEEEeccEEEeEEec---CCceEEEEeecCCCCCCCeEEEEccC
Q 033147           74 PCAGPVDAFCVLILDPDQVDYLNLK---SNQKLKFMSRLSDNGEKYWASLKTSP  124 (126)
Q Consensus        74 ~~~~~~~nF~vl~~~p~~VD~L~L~---~h~R~~f~~~~~~~~~~~W~~~~l~P  124 (126)
                      ...+.++||+++.|.|++|||++++   .|+|.+|++.     +++|..++|+|
T Consensus       151 ~~~p~p~~~~~~~v~p~~vefw~~~~~rlh~R~~y~~~-----~~~W~~~~l~P  199 (199)
T 1dnl_A          151 GEVPLPSFWGGFRVSLEQIEFWQGGEHRLHDRFLYQRE-----NDAWKIDRLAP  199 (199)
T ss_dssp             SSCCCCTTEEEEEECCSEEEEEECCGGGCCEEEEEEEC-----SSSEEEEECCC
T ss_pred             CCCCCCCceEEEEEECCEEEEEecCCCCCceEEEEEEC-----CCCEEEEEecC
Confidence            1235679999999999999999997   4999999983     24699999998

>1ci0_A Protein (PNP oxidase); B6 metabolism, structural genomics, PSI, protein structure initiative; HET: FMN; 2.70A {Saccharomyces cerevisiae} SCOP: b.45.1.1

Probab=99.61  E-value=1.5e-15  Score=114.74  Aligned_cols=112  Identities=13%  Similarity=0.213  Sum_probs=87.8

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCC--------CCCCCC
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQP--------KEFSLD   73 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~--------~~~~~d   73 (126)
                      .|++|||+++...|+||+|+|.+++++        ...++|++.+..+|..+-..++|+++.+...        ...-.+
T Consensus       105 ~val~f~~~~~~rqVrI~G~ae~v~~~--------~~~~yf~~rp~~s~i~awas~qs~~i~~r~~l~~~~~~~~~~f~~  176 (228)
T 1ci0_A          105 NAAIVFFWKDLQRQVRVEGITEHVNRE--------TSERYFKTRPRGSKIGAWASRQSDVIKNREELDELTQKNTERFKD  176 (228)
T ss_dssp             EEEEEEEETTTTEEEEEEEEEEECCHH--------HHHHHHHHSCHHHHHHHHHCCTTCEESCHHHHHHHHHHHHHHTTS
T ss_pred             eEEEEEEeCCCCEEEEEEEEEEEcCch--------hhHHHHHhCCHHHhhceeeCCCCcccCCHHHHHHHHHHHHHhhcC
Confidence            489999999999999999999999865        3367999999999997655678999876210        000011


Q ss_pred             CC-CCCCCcEEEEEEeccEEEeEEec---CCceEEEEeecCCCCCCCeEEEEccC
Q 033147           74 PC-AGPVDAFCVLILDPDQVDYLNLK---SNQKLKFMSRLSDNGEKYWASLKTSP  124 (126)
Q Consensus        74 ~~-~~~~~nF~vl~~~p~~VD~L~L~---~h~R~~f~~~~~~~~~~~W~~~~l~P  124 (126)
                      .. .+.++||+++.|.|++|||++++   -|.|.+|++...   +++|..++|+|
T Consensus       177 ~~~~p~p~~w~g~rv~P~~iEfWq~~~~rlHdR~~y~r~~~---~~~W~~~rL~P  228 (228)
T 1ci0_A          177 AEDIPCPDYWGGLRIVPLEIEFWQGRPSRLHDRFVYRRKTE---NDPWKVVRLAP  228 (228)
T ss_dssp             CSSCCCCTTEEEEEEEEEEEEEEECCTTSCCEEEEEECSST---TSCCEEEEECC
T ss_pred             CCCCCCCCcEEEEEEEccEEEEeeCCCCCcEEEEEEEecCC---CCCeEEEEecC
Confidence            12 45789999999999999999997   299999998420   24799999998

>1nrg_A Pyridoxine 5'-phosphate oxidase; PLP, FMN, oxidoreductase; HET: FMN PLP; 1.95A {Homo sapiens} SCOP: b.45.1.1 PDB: 3hy8_A*

Probab=99.60  E-value=2.6e-15  Score=115.42  Aligned_cols=115  Identities=14%  Similarity=0.254  Sum_probs=85.8

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCC--------CCCCC
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPK--------EFSLD   73 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~--------~~~~d   73 (126)
                      .|++|||+++...|+||+|+|.+++++.        ..++|+..+..+|..+-...+|+++.+....        ..-.+
T Consensus       126 ~vaL~f~~~~~~rqVrI~G~ae~v~d~e--------~~~~w~srp~~s~i~awas~Qs~~i~~r~~l~~~~~~~~~~f~~  197 (261)
T 1nrg_A          126 FASLVFYWEPLNRQVRVEGPVKKLPEEE--------AECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNEELEQLYQD  197 (261)
T ss_dssp             EEEEEEEEGGGTEEEEEEEEEEECCHHH--------HHHHHHHSCHHHHHHHHHCCTTSCCSCHHHHHHHHHHHHHHTTT
T ss_pred             eEEEEEEeCCCCEEEEEEEEEEEecCcc--------hHHHHhcCChhhhhhhhcCCCCCccCCHHHHHHHHHHHHhhccc
Confidence            4899999999999999999999998763        3578988777777655334788888652210        00011


Q ss_pred             CCCCCCCcEEEEEEeccEEEeEEec---CCceEEEEeecC------C----CCCCCeEEEEccC
Q 033147           74 PCAGPVDAFCVLILDPDQVDYLNLK---SNQKLKFMSRLS------D----NGEKYWASLKTSP  124 (126)
Q Consensus        74 ~~~~~~~nF~vl~~~p~~VD~L~L~---~h~R~~f~~~~~------~----~~~~~W~~~~l~P  124 (126)
                      ...+.++||+++.|.|++|||++++   .|+|.+|++...      +    .++++|..++|+|
T Consensus       198 ~~vp~p~~w~g~rv~P~~vEfwq~~~~rlHdR~~y~r~~~~~~~~~~~~~~~~~~~W~~~rL~P  261 (261)
T 1nrg_A          198 QEVPKPKSWGGYVLYPQVMEFWQGQTNRLHDRIVFRRGLPTGDSPLGPMTHRGEEDWLYERLAP  261 (261)
T ss_dssp             SCCCCCTTEEEEEECCSEEEEEECCTTSCCEEEEEEECSSTTSCCCCTTCEECSTTEEEEECCC
T ss_pred             CCCCCCCcEEEEEEEccEEEEEECCCCCCeEEEEEEECCccccccccccccCCCCCeEEEEccC
Confidence            1235678999999999999999998   399999998430      0    0135799999998

>1ty9_A Phenazine biosynthesis protein PHZG; chorismate, oxidoreductase; HET: FMN; 1.80A {Pseudomonas fluorescens} SCOP: b.45.1.1 PDB: 1t9m_A*

Probab=99.53  E-value=4.8e-15  Score=111.46  Aligned_cols=109  Identities=12%  Similarity=0.228  Sum_probs=74.5

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHh-------ccCCCCCCCcCCCCCCCCCCCCC
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARL-------QYLDPEQGCPSVNEQPKEFSLDP   74 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~-------~y~~p~PG~~~~~~~~~~~~~d~   74 (126)
                      .|++|||+++...|+||+|+|.+++++.        ..++|+..+..+|.       +...+.||.......... ..+.
T Consensus       104 ~val~f~~~~~~rqvrI~G~ae~v~~~~--------~~~~w~~rp~~s~i~A~as~qs~~~~~~~~l~~~~~~~~-~~~~  174 (222)
T 1ty9_A          104 WASGVLYWRETSQQIILNGQAVRLPNAK--------ADDAWLKRPYATHPMSSVSRQSEELQDVQAMRNAARQLA-ELQG  174 (222)
T ss_dssp             EEEEEEEETTTTEEEEEEEEEEECCHHH--------HHHHHHTSCGGGHHHHHHCCTTSBCCCHHHHHHHHHHHH-TSCS
T ss_pred             eEEEEEEcCCCCeEEEEEEEEEEEccHH--------hHHHHHhCccccccceeeccCCCcCCChHHHHHHHHHHh-hccC
Confidence            4899999999999999999999998542        24577765544432       222222222211000000 0011


Q ss_pred             CCCCCCcEEEEEEeccEEEeEEec---CCceEEEEeecCCCCCCCeEEEEccC
Q 033147           75 CAGPVDAFCVLILDPDQVDYLNLK---SNQKLKFMSRLSDNGEKYWASLKTSP  124 (126)
Q Consensus        75 ~~~~~~nF~vl~~~p~~VD~L~L~---~h~R~~f~~~~~~~~~~~W~~~~l~P  124 (126)
                      ..+.++||+++.|.|++|||+++.   .|+|.+|++..     ++|..++|+|
T Consensus       175 ~~p~p~~w~~~rv~P~~vEfwq~~~~rlHdR~~y~~~~-----~~W~~~rL~P  222 (222)
T 1ty9_A          175 PLPRPEGYCVFELRLESLEFWGNGQERLHERLRYDRSD-----TGWNVRRLQP  222 (222)
T ss_dssp             CCCCCTTEEEEEEEEEEEEEEEEEETTEEEEEEEEEET-----TEEEEEEECC
T ss_pred             CCCCCCCEEEEEEEeeEEEEEECCCCCCcEEEEEEECC-----CCEEEEEecC
Confidence            235789999999999999999987   39999999842     3699999998

>2a2j_A Pyridoxamine 5'-phosphate oxidase; beta barrel, structural genomics, mycobacterium tuberculosis structural proteomics project, XMTB; HET: CME; 2.50A {Mycobacterium tuberculosis} SCOP: b.45.1.1

Probab=99.45  E-value=1.9e-13  Score=104.29  Aligned_cols=106  Identities=12%  Similarity=0.132  Sum_probs=84.2

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCC---------CCCC
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPK---------EFSL   72 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~---------~~~~   72 (126)
                      .|++|||+++...|+||+|+|.++++.        ...++|++.+..+|..+-..++++++.+....         .. .
T Consensus       127 ~vaL~f~~~~~~rqVrI~G~ae~v~~~--------es~~yf~srp~~sqi~awas~QS~~i~~r~~L~~~~~~~~~~f-~  197 (246)
T 2a2j_A          127 YASATFPWYQLGRQAHVQGPVSKVSTE--------EIFTYWSMRPRGAQLGAWASQQSRPVGSRAQLDNQLAEVTRRF-A  197 (246)
T ss_dssp             EEEEEEEEGGGTEEEEEEEEEEECCHH--------HHHHHHHHSCHHHHHHHHHSCTTCCCCCSHHHHHHHHHHHHHH-T
T ss_pred             eEEEEEEeCCCCEEEEEEEEEEEeccH--------hHHHHHHhCCHhhhceEEeCCCCcccCCHHHHHHHHHHHHHhc-c
Confidence            489999999999999999999999865        23579999999999866545788898763210         01 1


Q ss_pred             CC-CCCCCCcEEEEEEeccEEEeEEec---CCceEEEEeecCCCCCCCeEEEEccCC
Q 033147           73 DP-CAGPVDAFCVLILDPDQVDYLNLK---SNQKLKFMSRLSDNGEKYWASLKTSPE  125 (126)
Q Consensus        73 d~-~~~~~~nF~vl~~~p~~VD~L~L~---~h~R~~f~~~~~~~~~~~W~~~~l~P~  125 (126)
                      +. ..+.++||+++.|.|++|||++++   -|.|.+|++       +  ..+.|+|.
T Consensus       198 ~~~~vp~pp~w~g~rv~P~~iEfWqg~~~rlHdR~~y~r-------~--~~~rL~P~  245 (246)
T 2a2j_A          198 DQDQIPVPPGWGGYRIAPEIVEFWQGRENRMHNRIRVAN-------G--RLERLQPG  245 (246)
T ss_dssp             TCSSCCCCTTEEEEEECCSEEEEEECCTTSCCEEEEEET-------T--EEEECCTT
T ss_pred             cCCCCCCCCcEEEEEEEcCEEEEccCCCCCCeEEEEEEC-------C--CcEECCCC
Confidence            11 235789999999999999999997   299999986       1  88999985

>2ig6_A NIMC/NIMA family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: FMN; 1.80A {Clostridium acetobutylicum}

Probab=98.06  E-value=4.1e-05  Score=53.34  Aligned_cols=69  Identities=16%  Similarity=0.145  Sum_probs=54.5

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCc
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDA   81 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~n   81 (126)
                      .|++||+.+. ..|+||+|+|+++++.       ....++|.. +|.+++.| .+                     ..++
T Consensus        77 ~V~l~~~~~~-~~~v~i~G~a~~v~d~-------e~~~~~~~~-~p~~~~~~-~~---------------------~dp~  125 (150)
T 2ig6_A           77 KVEISGMNKK-GQWIRLTGEVANDDRR-------EVKELALEA-VPSLKNMY-SV---------------------DDGI  125 (150)
T ss_dssp             EEEEEEECTT-SCEEEEEEEEEECCCH-------HHHHHHHHH-SGGGGGTC-CT---------------------TSSC
T ss_pred             CEEEEEEcCC-CeEEEEEEEEEEECCH-------HHHHHHHHh-ChHHHHhh-cC---------------------CCCc
Confidence            4789999998 6899999999999876       345779987 47777655 21                     1357


Q ss_pred             EEEEEEeccEEEeEEecCCc
Q 033147           82 FCVLILDPDQVDYLNLKSNQ  101 (126)
Q Consensus        82 F~vl~~~p~~VD~L~L~~h~  101 (126)
                      ++|+.|.|.+++|++++++.
T Consensus       126 ~~l~~v~~~~a~~wd~~~~p  145 (150)
T 2ig6_A          126 FAVLYFTKGEGTICSFKGEN  145 (150)
T ss_dssp             EEEEEEEEEEEEEECSSSCC
T ss_pred             EEEEEEECCEEEEEeCCCCc
Confidence            99999999999999987543

>2qea_A Putative general stress protein 26; structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.46A {Jannaschia SP}

Probab=97.98  E-value=9.6e-05  Score=51.81  Aligned_cols=74  Identities=11%  Similarity=0.148  Sum_probs=53.7

Q ss_pred             EEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCcE
Q 033147            3 HQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAF   82 (126)
Q Consensus         3 ~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~nF   82 (126)
                      |.+||+.+....|+||+|+++++.+.       ....++|.   +..++-|    |+.+                ..+++
T Consensus        65 v~l~~~~~~~~~~v~v~G~a~~v~d~-------~~~~~~~~---~~~~~~~----~~~~----------------~~p~~  114 (160)
T 2qea_A           65 AQFVVSDDGEGLYADLDGTLERSTDR-------EALDEFWS---FVADAWF----DGGQ----------------HDPDV  114 (160)
T ss_dssp             EEEEEEETTTTEEEEEEEEEEEECCH-------HHHHHSCC---HHHHHHC----TTCS----------------SCTTE
T ss_pred             EEEEEECCCCCeEEEEEEEEEEEcCH-------HHHHHHHH---HHHHHHc----cCCC----------------CCCCE
Confidence            78999999999999999999999875       23345664   3344333    2111                23589


Q ss_pred             EEEEEeccEEEeEEec-CCceEEEE
Q 033147           83 CVLILDPDQVDYLNLK-SNQKLKFM  106 (126)
Q Consensus        83 ~vl~~~p~~VD~L~L~-~h~R~~f~  106 (126)
                      +|+.|.|+++++++.+ ++.|..|.
T Consensus       115 ~v~~i~p~~~e~w~~~~~~l~~~~~  139 (160)
T 2qea_A          115 CLLKFTPASGEISITEGGGARFLYE  139 (160)
T ss_dssp             EEEEEEEEEEEEEEECCSSHHHHHH
T ss_pred             EEEEEECCEEEEEECCCChHHHHHH
Confidence            9999999999999987 45555554

>3dmb_A Putative general stress protein 26 with A PNP-OXI fold; PNP-oxidase like fold, structural genomics; HET: MSE; 2.30A {Xanthomonas campestris PV}

Probab=97.94  E-value=5e-05  Score=52.61  Aligned_cols=68  Identities=15%  Similarity=0.063  Sum_probs=51.1

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCc
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDA   81 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~n   81 (126)
                      .|.+||+.+....|+||+|+++++++.       +..+++|.   +..++-|    |+.+                ..++
T Consensus        68 ~v~l~~~~~~~~~~v~v~G~a~~~~d~-------~~~~~~~~---~~~~~~~----~~g~----------------~dp~  117 (147)
T 3dmb_A           68 RVIGAFSSKGHDLFASISGSLREDTDP-------AVVDRLWN---PYVAAWY----EGGK----------------DDPK  117 (147)
T ss_dssp             EEEEEEECTTSSEEEEEEEEEEECCCH-------HHHHHHCC---HHHHHHC----TTGG----------------GCTT
T ss_pred             eEEEEEEcCCCCeEEEEEEEEEEecCH-------HHHHHHhh---HHHHHHc----cCCC----------------CCCC
Confidence            378999999988999999999999765       34566773   4444433    1111                2368


Q ss_pred             EEEEEEeccEEEeEEecC
Q 033147           82 FCVLILDPDQVDYLNLKS   99 (126)
Q Consensus        82 F~vl~~~p~~VD~L~L~~   99 (126)
                      ++|+.|.|++++|++.++
T Consensus       118 ~~vl~v~p~~~e~W~~~~  135 (147)
T 3dmb_A          118 LALLRLDADHAQIWLNGS  135 (147)
T ss_dssp             CEEEEEEEEEEEEEECCC
T ss_pred             EEEEEEEcCEEEEEECCC
Confidence            999999999999999874

>2hhz_A Pyridoxamine 5'-phosphate oxidase-related; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.00A {Streptococcus suis}

Probab=97.93  E-value=9.1e-05  Score=50.99  Aligned_cols=76  Identities=13%  Similarity=0.155  Sum_probs=54.6

Q ss_pred             eEEEEEEECCC--CeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCC
Q 033147            2 MHQICWYFTES--WDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPV   79 (126)
Q Consensus         2 ~~E~~wy~~~t--~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~   79 (126)
                      .|.+|++.+..  ..|+||+|+|+++++..       . .++|+. ++..+..|    ||                 +..
T Consensus        62 ~V~l~~~~~~~~~~~~v~i~G~a~~v~d~~-------~-~~~~~~-~p~~~~~~----~~-----------------~~~  111 (150)
T 2hhz_A           62 RVAMTAISEEGYLIQVVRVEGTARPVENDY-------L-KTVFAD-NPYYQHIY----KD-----------------ESS  111 (150)
T ss_dssp             EEEEEEEECSTTCCEEEEEEEEEEEECHHH-------H-HHHHTT-CGGGGGGC----C---------------------
T ss_pred             eEEEEEEcCCcceeEEEEEEEEEEECCcHH-------H-HHHHHh-Chhhhhcc----cC-----------------CCC
Confidence            47889999876  38999999999998762       2 368865 46666555    11                 123


Q ss_pred             CcEEEEEEeccEEEeEEecCCceEEEEe
Q 033147           80 DAFCVLILDPDQVDYLNLKSNQKLKFMS  107 (126)
Q Consensus        80 ~nF~vl~~~p~~VD~L~L~~h~R~~f~~  107 (126)
                      .+|+|+.|.|.++++++++++....|..
T Consensus       112 ~~~~v~~i~~~~~~~~d~~~~~~~~~~~  139 (150)
T 2hhz_A          112 DTMQVFQIYAGHGFYHSLTQGHKYIFSI  139 (150)
T ss_dssp             -CCEEEEEEEEEEEEEEGGGTEEEEEEE
T ss_pred             CcEEEEEEEccEEEEEECCCCCcEEEEe
Confidence            5899999999999999998543337766

>2re7_A Uncharacterized protein; general stress protein COG3871, structural genomics, joint C structural genomics, JCSG; 2.50A {Psychrobacter arcticus}

Probab=97.83  E-value=7.2e-05  Score=50.25  Aligned_cols=65  Identities=8%  Similarity=0.083  Sum_probs=47.7

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCc
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDA   81 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~n   81 (126)
                      .|.+||+.+....|+||+|+|+++++.       ....++|.   +.+++-|    |+.                ...++
T Consensus        68 ~v~l~~~~~~~~~~v~v~G~a~~~~d~-------~~~~~~~~---~~~~~~~----~~~----------------~~~~~  117 (134)
T 2re7_A           68 RIGLTYATQDEKNYVSISGDAELPTDK-------AKLDELWS---PVYSAFF----ANG----------------KEDAN  117 (134)
T ss_dssp             EEEEEEECTTSSCEEEEEEEEECCCCH-------HHHHHHCC---HHHHHTS----TTG----------------GGCTT
T ss_pred             cEEEEEEcCCCCeEEEEEEEEEEECCH-------HHHHHHhh---HHHHHHc----cCC----------------CCCCC
Confidence            478999999999999999999999875       23455663   3344333    211                12358


Q ss_pred             EEEEEEeccEEEeEE
Q 033147           82 FCVLILDPDQVDYLN   96 (126)
Q Consensus        82 F~vl~~~p~~VD~L~   96 (126)
                      ++|+.|.|++|++++
T Consensus       118 ~~~~~i~~~~~~~w~  132 (134)
T 2re7_A          118 IQLIKVVPHGVECWL  132 (134)
T ss_dssp             EEEEEEEEEEEEEEC
T ss_pred             EEEEEEEeCEEEEec
Confidence            999999999999986

>3u35_A General stress protein; PNP-oxidase like fold, FMN/FAD, protein BI; HET: PGE; 2.50A {Xanthomonas axonopodis PV} PDB: 3u34_A*

Probab=97.67  E-value=0.00024  Score=51.31  Aligned_cols=75  Identities=15%  Similarity=0.089  Sum_probs=54.4

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCc
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDA   81 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~n   81 (126)
                      .|.+||+.+....|++|+|+|.++.+.       ....++|.   +..++-|    |+.+                ..++
T Consensus        87 ~v~l~~~~~~~~~~V~v~G~a~vv~D~-------e~~~~lw~---~~~~~~~----p~g~----------------~dP~  136 (182)
T 3u35_A           87 RVIGAFSSKGHDLFASISGSLREDTDP-------AMVDRLWN---PYVAAWY----EGGK----------------TDPN  136 (182)
T ss_dssp             EEEEEEECTTSSEEEEEEEEEEECCCH-------HHHHHHCC---HHHHTTC----TTGG----------------GCTT
T ss_pred             cEEEEEECCCCCeEEEEEEEEEEEcCH-------HHHHHHHH---HHHHHhc----cCCC----------------CCCC
Confidence            378999999888999999999999765       34466783   4444333    1111                1358


Q ss_pred             EEEEEEeccEEEeEEecC--CceEEEE
Q 033147           82 FCVLILDPDQVDYLNLKS--NQKLKFM  106 (126)
Q Consensus        82 F~vl~~~p~~VD~L~L~~--h~R~~f~  106 (126)
                      ++||.|.|.+++|++..+  =-|+.+.
T Consensus       137 ~~vlrv~p~~~e~Wd~~~~~~~~~~~~  163 (182)
T 3u35_A          137 LALLRLDADHAQIWLNESSLLAGIKVL  163 (182)
T ss_dssp             EEEEEEEEEEEEEEEEEEEECCCEEEE
T ss_pred             EEEEEEEeCEEEEEeCCCCceeeeeee
Confidence            999999999999999973  3455553

>2i02_A General stress protein of COG3871; pyridoxamine 5'-phosphate like family protein, structural genomics, joint center for structural genomics; HET: MSE FMN P33; 1.80A {Nostoc punctiforme} SCOP: b.45.1.1

Probab=97.63  E-value=0.00037  Score=47.54  Aligned_cols=67  Identities=12%  Similarity=0.193  Sum_probs=49.0

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCc
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDA   81 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~n   81 (126)
                      .|.++|+.+....|+||.|+|+++.++       ....++|+.+   ++. |.   |+.+                ...+
T Consensus        72 ~v~l~~~~~~~~~~v~v~G~a~~v~d~-------~~~~~~~~~~---~~~-~~---~~~~----------------~~~~  121 (148)
T 2i02_A           72 QVNVSFSSPEQQRYVSISGTSQLVKDR-------NKMRELWKPE---LQT-WF---PKGL----------------DEPD  121 (148)
T ss_dssp             EEEEEEEETTTTEEEEEEEEEEEECCH-------HHHHHHCCGG---GGG-TC---TTGG----------------GCTT
T ss_pred             cEEEEEEcCCCCeEEEEEEEEEEEcCH-------HHHHHHHhHH---HHH-Hc---cCCC----------------CCCC
Confidence            378999999999999999999999865       3445677543   222 21   2211                1246


Q ss_pred             EEEEEEeccEEEeEEec
Q 033147           82 FCVLILDPDQVDYLNLK   98 (126)
Q Consensus        82 F~vl~~~p~~VD~L~L~   98 (126)
                      |+|+.|.|+++++++.+
T Consensus       122 ~~v~~i~~~~~~~~~~~  138 (148)
T 2i02_A          122 IALLKVNINQVNYWDST  138 (148)
T ss_dssp             EEEEEEEEEEEEEEEGG
T ss_pred             EEEEEEEeCEEEEEcCC
Confidence            99999999999999976

>2hq7_A Protein, related to general stress protein 26(GS2 B.subtilis; NP_350077.1, structural genomics, joint center for structural genomics; 2.00A {Clostridium acetobutylicum} SCOP: b.45.1.1

Probab=97.24  E-value=0.0018  Score=43.70  Aligned_cols=68  Identities=9%  Similarity=0.145  Sum_probs=49.2

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCc
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDA   81 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~n   81 (126)
                      .|.++++.+....+++|.|+++++++.       ....++|..+...   -|    |+.+                ...+
T Consensus        67 ~v~l~~~~~~~~~~v~v~G~a~~v~d~-------~~~~~~~~~~~~~---~~----~~~~----------------~~~~  116 (146)
T 2hq7_A           67 KICLYFVDDNKFAGLMLVGTIEILHDR-------ASKEMLWTDGCEI---YY----PLGI----------------DDPD  116 (146)
T ss_dssp             EEEEEEECSSSSEEEEEEEEEEEECCH-------HHHHHHCCTTHHH---HC----TTGG----------------GCTT
T ss_pred             eEEEEEECCCCceEEEEEEEEEEEcCH-------HHHHHHHHHHHHH---HC----CCCC----------------CCCC
Confidence            478899999888999999999999876       2345667544322   21    2111                1257


Q ss_pred             EEEEEEeccEEEeEEecC
Q 033147           82 FCVLILDPDQVDYLNLKS   99 (126)
Q Consensus        82 F~vl~~~p~~VD~L~L~~   99 (126)
                      |+|+.|.|+++++++..+
T Consensus       117 ~~~~~i~p~~~~~w~~~~  134 (146)
T 2hq7_A          117 YTALCFTAEWGNYYRHLK  134 (146)
T ss_dssp             EEEEEEEEEEEEEEETTE
T ss_pred             EEEEEEEccEEEEEeCCC
Confidence            999999999999998653

>3ec6_A General stress protein 26; alpha-beta structure, structural genomics of niaid; HET: FAD; 1.60A {Bacillus anthracis} SCOP: b.45.1.0

Probab=97.03  E-value=0.006  Score=41.12  Aligned_cols=66  Identities=12%  Similarity=0.228  Sum_probs=44.4

Q ss_pred             EEEEE-E--ECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCC
Q 033147            3 HQICW-Y--FTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPV   79 (126)
Q Consensus         3 ~E~~w-y--~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~   79 (126)
                      |.+|+ |  .+....+++|+|+|+++.+.       ....++|+   +.++.-|    +|                 ...
T Consensus        62 v~l~v~~~~d~~~~~~v~v~G~a~~~~d~-------~~~~~~~~---~~~~~~~----~~-----------------~~~  110 (139)
T 3ec6_A           62 VHVLLGREGKKLDEDYIEVEGLASIEEDS-------TLKNKFWN---NSLKRWL----LR-----------------PED  110 (139)
T ss_dssp             EEEEECC---CTTCCEEEEEEEEEEECCH-------HHHHHHCC---GGGGGTC----SS-----------------TTC
T ss_pred             EEEEEEecCCCCCccEEEEEEEEEEEcCH-------HHHHHHHH---HHHHHHh----CC-----------------CCC
Confidence            56776 3  35667899999999999865       34567886   3333222    11                 013


Q ss_pred             CcEEEEEEeccEEEeEEecC
Q 033147           80 DAFCVLILDPDQVDYLNLKS   99 (126)
Q Consensus        80 ~nF~vl~~~p~~VD~L~L~~   99 (126)
                      .+|+||.|+|+++++++..+
T Consensus       111 ~~~~~i~i~p~~~~~~d~~g  130 (139)
T 3ec6_A          111 PNYVLIKINPDTIYYIDGAG  130 (139)
T ss_dssp             TTEEEEEEEEEEEEEEC---
T ss_pred             CCEEEEEEEeeEEEEEcCCC
Confidence            58999999999999999875

>3db0_A LIN2891 protein; putative pyridoxamine 5'-phosphate oxidase, STR genomics, joint center for structural genomics, JCSG; 2.00A {Listeria innocua}

Probab=96.40  E-value=0.008  Score=39.70  Aligned_cols=63  Identities=22%  Similarity=0.404  Sum_probs=41.5

Q ss_pred             EEEEEEE-CCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCc
Q 033147            3 HQICWYF-TESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDA   81 (126)
Q Consensus         3 ~E~~wy~-~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~n   81 (126)
                      |.+++.+ +....+++|.|+|.++.+.       ....++|+.+   ++ .|  . ||                 ...++
T Consensus        64 v~l~v~~~~~~~~~v~v~G~a~~v~d~-------~~~~~~~~~~---~~-~~--~-~~-----------------~~~~~  112 (128)
T 3db0_A           64 VCVLIGYDSPGSAFLEINGLASLEEDE-------SIKERIWENI---SK-DW--F-QG-----------------EDSPS  112 (128)
T ss_dssp             EEEEECCCSTTCCEEEEEEEEEECCCH-------HHHHHHHHHH---CS-SC--C-C-----------------------
T ss_pred             eEEEEEEcCCCCcEEEEEEEEEEEcCH-------HHHHHHHHHH---HH-Hh--C-CC-----------------CCCCC
Confidence            4555545 7788899999999999865       3456788532   11 12  1 21                 01267


Q ss_pred             EEEEEEeccEEEeEE
Q 033147           82 FCVLILDPDQVDYLN   96 (126)
Q Consensus        82 F~vl~~~p~~VD~L~   96 (126)
                      |+||.|.|++++|++
T Consensus       113 ~~~~ri~p~~~~~~~  127 (128)
T 3db0_A          113 FVVIKIVPEQIRILN  127 (128)
T ss_dssp             CCEEEEEEEEEEEEC
T ss_pred             EEEEEEEeEEEEEec
Confidence            999999999999985

>2fhq_A Putative general stress protein; alpha-beta structure, structural genomics, PSI, protein STRU initiative; HET: MSE; 1.87A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1

Probab=96.30  E-value=0.022  Score=37.93  Aligned_cols=64  Identities=14%  Similarity=0.345  Sum_probs=44.8

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCc
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDA   81 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~n   81 (126)
                      .|.++++.+.  .+++|.|++++++++       ....++|..+.   ++.|    |+.                ....+
T Consensus        69 ~v~l~~~~~~--~~v~v~G~a~~v~d~-------~~~~~~~~~~~---~~~~----p~~----------------~~~~~  116 (141)
T 2fhq_A           69 KAGLCFQEKG--DSVALMGEVEVVTDE-------KLKQELWQDWF---IEHF----PGG----------------PTDPG  116 (141)
T ss_dssp             EEEEEEEETT--EEEEEEEEEEEECCH-------HHHHHSCCGGG---GGTC----TTC----------------TTCTT
T ss_pred             cEEEEEEeCC--CEEEEEEEEEEECCH-------HHHHHHHHHHH---HHHc----CCC----------------CCCCC
Confidence            3678888876  599999999999875       34456776442   2111    211                01257


Q ss_pred             EEEEEEeccEEEeEEe
Q 033147           82 FCVLILDPDQVDYLNL   97 (126)
Q Consensus        82 F~vl~~~p~~VD~L~L   97 (126)
                      |+|+.|+|+++++++.
T Consensus       117 ~~~~~i~p~~~~~~~~  132 (141)
T 2fhq_A          117 YVLLKFTANHATYWIE  132 (141)
T ss_dssp             EEEEEEEEEEEEEEET
T ss_pred             EEEEEEEcCEEEEeeC
Confidence            9999999999999986

>2iab_A Hypothetical protein; NP_828636.1, structural genomics, JOIN for structural genomics, JCSG; 2.00A {Streptomyces avermitilis}

Probab=95.39  E-value=0.029  Score=38.65  Aligned_cols=73  Identities=7%  Similarity=-0.071  Sum_probs=47.2

Q ss_pred             EEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCcE
Q 033147            3 HQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAF   82 (126)
Q Consensus         3 ~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~nF   82 (126)
                      |.+|++.+  ..+++|.|+|+++.++...       .++|+.+.    ..|.+. |.             +    ....|
T Consensus        73 Vsl~v~~~--~~~v~v~G~a~~v~d~~~~-------~~~~~~~~----~k~~~~-~~-------------~----~~~~~  121 (155)
T 2iab_A           73 VRLGIGPT--RDLVLVEGTALPLEPAGLP-------DGVGDTFA----EKTGFD-PR-------------R----LTTSY  121 (155)
T ss_dssp             EEEEESST--TCEEEEEEEEEEECGGGCC-------TTHHHHHH----HHHSCC-GG-------------G----CSSCE
T ss_pred             EEEEEEcC--CCEEEEEEEEEEecCchhH-------HHHHHHHH----HHhCCC-cc-------------c----cCCCE
Confidence            56666655  5799999999999865322       23343322    123110 10             0    11359


Q ss_pred             EEEEEeccEEEeEEec--CCceEEEE
Q 033147           83 CVLILDPDQVDYLNLK--SNQKLKFM  106 (126)
Q Consensus        83 ~vl~~~p~~VD~L~L~--~h~R~~f~  106 (126)
                      +++.|.|++|...+-.  -|.|.+|.
T Consensus       122 ~~~ri~p~~v~~w~~~~~l~~r~~~~  147 (155)
T 2iab_A          122 LYFRISPRRVQAWREANELSGRELMR  147 (155)
T ss_dssp             EEEEEEEEEEEEESSGGGSTTCEEEE
T ss_pred             EEEEEEEEEEEEecCCCCcCcceEEE
Confidence            9999999999998855  38999997

>3ba3_A Protein LP_0091, pyridoxamine 5'-phosphate oxidase-like protein; NP_783940.1, structural genomics; HET: MSE; 1.55A {Lactobacillus plantarum WCFS1}

Probab=94.45  E-value=0.07  Score=37.06  Aligned_cols=67  Identities=4%  Similarity=-0.143  Sum_probs=49.3

Q ss_pred             eEEEEEEECCC---CeeEEEE-EEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCC
Q 033147            2 MHQICWYFTES---WDQFRIN-GRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAG   77 (126)
Q Consensus         2 ~~E~~wy~~~t---~~Q~Ri~-G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~   77 (126)
                      .|++|.+.++.   +.|+|++ |+|.+.++..     .+.+..+|++. |..+..|.                   .   
T Consensus        63 ~V~i~~~~~d~~~~~~~IRi~~G~a~~~~~~~-----~~~k~~~~e~~-P~~k~~y~-------------------~---  114 (145)
T 3ba3_A           63 DIAFITIPNDGTAGNPYLRAQHVKLQRSTKTM-----TDLLPQYLETV-PNYQQVWD-------------------A---  114 (145)
T ss_dssp             EEEEEEEECTTCTTCCEEEEEEEEEEECSCCH-----HHHHHHHHHHS-TTHHHHHH-------------------H---
T ss_pred             CEEEEEECCCCCccceEEEEEeEEEEEcCCch-----HHHHHHHHHhC-hhhhhccc-------------------C---
Confidence            48999998887   7999999 9999975421     24567889744 45554440                   0   


Q ss_pred             CCCcEEEEEEeccEEEeEE
Q 033147           78 PVDAFCVLILDPDQVDYLN   96 (126)
Q Consensus        78 ~~~nF~vl~~~p~~VD~L~   96 (126)
                      ..++|.|+.|.+.++.+..
T Consensus       115 ~~~~l~vf~i~~~~a~~~~  133 (145)
T 3ba3_A          115 IGSTLVVFELKLTDLFVDA  133 (145)
T ss_dssp             HGGGEEEEEEECSEEEEEC
T ss_pred             CCCcEEEEEEECCEEEEEC
Confidence            1247999999999999887

>2htd_A Predicted flavin-nucleotide-binding protein from family structurally related to pyridoxine...; putative pyridoxamine 5'-phosphate oxidase; HET: MSE; 1.60A {Lactobacillus delbrueckii subsp}

Probab=93.75  E-value=0.12  Score=35.06  Aligned_cols=27  Identities=11%  Similarity=0.028  Sum_probs=24.8

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCC
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGS   28 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~   28 (126)
                      .|.++|+.+.++.++||.|++.++.++
T Consensus        87 ~V~l~~~~~~~~~~v~i~G~a~~v~d~  113 (140)
T 2htd_A           87 KVALVAADVPSHTAVRVLATAEVHEDD  113 (140)
T ss_dssp             CEEEEEEETTTTEEEEEEEEEEEESSS
T ss_pred             eEEEEEEecCCCCEEEEEEEEEEecCh
Confidence            378999999999999999999999877

>1vl7_A Hypothetical protein ALR5027; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, oxidoreductase; 1.50A {Nostoc SP} SCOP: b.45.1.1

Probab=93.59  E-value=0.15  Score=34.83  Aligned_cols=69  Identities=9%  Similarity=0.121  Sum_probs=42.7

Q ss_pred             eEEEEEEECCC-------CeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCC
Q 033147            2 MHQICWYFTES-------WDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDP   74 (126)
Q Consensus         2 ~~E~~wy~~~t-------~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~   74 (126)
                      .|.++++.+..       ..+++|.|+|.+++++.  +.|...+..+....+..++ .|                     
T Consensus        78 ~vsl~v~~~~~~~~~~~~~~~v~i~G~a~~v~~~~--~~~~~~~~~~~~~~p~~~~-~~---------------------  133 (157)
T 1vl7_A           78 LVNVLFVDDEAKTNQIFARRRLSFDCTATLIERES--QKWNQVVDQFQERFGQIIE-VL---------------------  133 (157)
T ss_dssp             EEEEEEECCGGGCSSGGGCCEEEEEEEEEEECTTS--HHHHHHHHHHHHHHTHHHH-HH---------------------
T ss_pred             cEEEEEEcCccccCCcccCceEEEEEEEEEcCCCc--HHHHHHHHHHHHHCchHHH-Hh---------------------
Confidence            36778876542       46899999999998763  2344443333332222111 00                     


Q ss_pred             CCCCCCcEEEEEEeccEEEeEE
Q 033147           75 CAGPVDAFCVLILDPDQVDYLN   96 (126)
Q Consensus        75 ~~~~~~nF~vl~~~p~~VD~L~   96 (126)
                        ....+|+|+.|+|+++.|+.
T Consensus       134 --~~~~~~~l~~l~~~~~~~~~  153 (157)
T 1vl7_A          134 --RGLADFRIFQLTPKEGRFVI  153 (157)
T ss_dssp             --HHHSCCEEEEEEEEEEEEEC
T ss_pred             --hccCCEEEEEEEEeEEEEEc
Confidence              01247999999999999874

>1rfe_A Hypothetical protein RV2991; structural genomics, TB, FMN BIN PSI, protein structure initiative, TB structural genomics consortium; 2.00A {Mycobacterium tuberculosis} SCOP: b.45.1.1

Probab=92.02  E-value=0.99  Score=30.37  Aligned_cols=75  Identities=5%  Similarity=0.080  Sum_probs=46.1

Q ss_pred             EEEEEEECCCC---eeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCC
Q 033147            3 HQICWYFTESW---DQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPV   79 (126)
Q Consensus         3 ~E~~wy~~~t~---~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~   79 (126)
                      |.++++.+...   ..++|.|++.++.++       ....++|+.+...    |..+   . .+  .....    .....
T Consensus        70 v~l~~~~~~~~~~~~~v~~~G~a~~v~d~-------~~~~~~~~~l~~~----~~~~---~-~~--~~~~~----~~~~~  128 (162)
T 1rfe_A           70 VSFLLEDGDTYDTLRGVSFEGVAEIVEEP-------EALHRVGVSVWER----YTGP---Y-TD--ECKPM----VDQMM  128 (162)
T ss_dssp             EEEEEEECSSGGGCEEEEEEEEEEEECCH-------HHHHHHHHHHHHH----HTCC---C-CG--GGHHH----HHHHT
T ss_pred             EEEEEEcCCCcccccEEEEEEEEEEeCCh-------HHHHHHHHHHHHH----hcCc---c-cc--hhHHH----HHhcc
Confidence            67888877653   469999999999875       2345567655422    2111   0 00  00000    00123


Q ss_pred             CcEEEEEEeccEEEeEEec
Q 033147           80 DAFCVLILDPDQVDYLNLK   98 (126)
Q Consensus        80 ~nF~vl~~~p~~VD~L~L~   98 (126)
                      .+++|+.|.|++|..++.+
T Consensus       129 ~~~~v~~i~~~~~~~~~~~  147 (162)
T 1rfe_A          129 NKRVGVRIVARRTRSWDHR  147 (162)
T ss_dssp             TTEEEEEEEEEEEEEEEGG
T ss_pred             CceEEEEEEEEEEEEeccc
Confidence            6899999999999998864

>3f7e_A Pyridoxamine 5'-phosphate oxidase-related, FMN- binding; F420 dependent reductase, unknown function; HET: MSE; 1.23A {Mycobacterium smegmatis}

Probab=90.95  E-value=1.2  Score=29.14  Aligned_cols=28  Identities=11%  Similarity=0.123  Sum_probs=21.8

Q ss_pred             eEEEEEEECCC-CeeEEEEEEEEEEcCCC
Q 033147            2 MHQICWYFTES-WDQFRINGRVDVIDGSN   29 (126)
Q Consensus         2 ~~E~~wy~~~t-~~Q~Ri~G~~~ii~~~~   29 (126)
                      .|.++++.+.. ..+++|.|++.++.++.
T Consensus        62 ~v~l~v~~~~~~~~~v~v~G~a~~v~~~~   90 (131)
T 3f7e_A           62 AVAMSVIDPDNPYRYLEVRGLVEDIVPDP   90 (131)
T ss_dssp             EEEEEEECSSCTTCEEEEEEEEEEEEECT
T ss_pred             cEEEEEEcCCCCeeEEEEEEEEEEeccCc
Confidence            36778887764 67999999998887653

>2asf_A Hypothetical protein RV2074; H37RV, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: CIT; 1.60A {Mycobacterium tuberculosis} SCOP: b.45.1.1

Probab=86.05  E-value=3.6  Score=26.91  Aligned_cols=24  Identities=13%  Similarity=0.061  Sum_probs=19.1

Q ss_pred             EEEEEEECCCCeeEEEEEEEEEEcCC
Q 033147            3 HQICWYFTESWDQFRINGRVDVIDGS   28 (126)
Q Consensus         3 ~E~~wy~~~t~~Q~Ri~G~~~ii~~~   28 (126)
                      |.+|++.+.  ..++|.|+++++.++
T Consensus        71 V~l~~~~~~--~~v~v~G~a~~~~d~   94 (137)
T 2asf_A           71 AVLSQVDGA--RWLSLEGRAAVNSDI   94 (137)
T ss_dssp             EEEEEEETT--EEEEEEEEEEEECCH
T ss_pred             EEEEEECCC--CEEEEEEEEEEecCH
Confidence            677877764  678899999999865

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	126
d1t9ma_	204	Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Pseu	99.77
d1dnla_	199	Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Esch	99.73
d1ci0a_	205	Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Bake	99.67
d2a2ja1	201	Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Myco	99.37
d1nrga_	213	Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Huma	99.32
d2hq7a1	141	Hypotheical protein CAC3491 {Clostridium acetobuty	97.94
d2i02a1	143	General stress protein 26 {Nostoc punctiforme pcc	97.88
d2fhqa1	135	Putative general stress protein BT1439 {Bacteroide	97.63
d1rfea_	160	Hypothetical protein Rv2991 {Mycobacterium tubercu	87.92
d2asfa1	125	Hypothetical protein Rv2074 {Mycobacterium tubercu	85.7
d1flma_	122	FMN-binding protein {Desulfovibrio vulgaris, strai	84.41

>d1t9ma_ b.45.1.1 (A:) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Pyridoxine 5'-phoshate oxidase (PNP oxidase)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.77  E-value=2.6e-19  Score=131.61  Aligned_cols=110  Identities=15%  Similarity=0.241  Sum_probs=89.9

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCC------CCCCCC
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKE------FSLDPC   75 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~------~~~d~~   75 (126)
                      .|++|||+++++.||||+|++..++++        ...++|+..+..+|..+....||+++.+.+...      ...+..
T Consensus        86 ~~sl~f~w~~~~rQvRi~G~~~~l~~~--------~~~~~~~~rp~~s~~~a~~s~qs~~i~~~~~l~~~~~~~~~~~~~  157 (204)
T d1t9ma_          86 WASGVLYWRESSQQIILNGRAERLPDE--------RADAQWLSRPYQTHPMSIASRQSETLADIHALRAEARRLAETDGP  157 (204)
T ss_dssp             EEEEEEEETTTTEEEEEEEEEEECCHH--------HHHHHHHHSCGGGHHHHHHCCTTSBCSCHHHHHHHHHHHTTSCSC
T ss_pred             ccEEEEecccceEEEEEEEEEeeccHH--------HHHHHHhcCchhcccceeecCcccccchhhhHHHHHHhhhhccCC
Confidence            489999999999999999999998876        335789999999999877789999997632110      011223


Q ss_pred             CCCCCcEEEEEEeccEEEeEEec---CCceEEEEeecCCCCCCCeEEEEccC
Q 033147           76 AGPVDAFCVLILDPDQVDYLNLK---SNQKLKFMSRLSDNGEKYWASLKTSP  124 (126)
Q Consensus        76 ~~~~~nF~vl~~~p~~VD~L~L~---~h~R~~f~~~~~~~~~~~W~~~~l~P  124 (126)
                      .+.++||+++.|.|++||++++.   .|+|.+|++..     ++|..++|+|
T Consensus       158 ~p~p~~~~g~~l~p~~iEfw~~~~~rlH~R~~y~~~~-----~~W~~~~L~P  204 (204)
T d1t9ma_         158 LPRPPGYCLFELCLESVEFWGNGTERLHERLRYDRDE-----GGWKHRYLQP  204 (204)
T ss_dssp             CCCCTTEEEEEEEEEEEEEEEEEETTEEEEEEEEECS-----SSEEEEEECC
T ss_pred             CCCCCceEEEEecCCEEEEcCCCCCCCEEEEEEEecC-----CcEEEEEeCC
Confidence            35789999999999999999987   39999999852     4799999998

>d1dnla_ b.45.1.1 (A:) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Pyridoxine 5'-phoshate oxidase (PNP oxidase)
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=2.9e-18  Score=125.45  Aligned_cols=110  Identities=7%  Similarity=0.059  Sum_probs=89.8

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCC-----C---CCC
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKE-----F---SLD   73 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~-----~---~~d   73 (126)
                      .|++|||+|+++.||||+|++..++++.        -.++|+..+..+|.......+++++++.+...     .   ..+
T Consensus        79 ~asl~f~w~~~~rQiRi~G~~~~~~~~~--------sd~~f~~rp~~sqi~a~~s~Qs~~i~~~~~l~~~~~~~~~~~~~  150 (199)
T d1dnla_          79 RVSLLFPWHTLERQVMVIGKAERLSTLE--------VMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQ  150 (199)
T ss_dssp             EEEEEECCGGGTEEEEEEEEEEECCHHH--------HHHHHTTSCHHHHHHHHHCCTTSCCSCTHHHHHHHHHHHHHSTT
T ss_pred             ceEEEEeecchheeeEEEEEeeecccHH--------HHhHhhccCccceeeeeccccccccccHHHHHHHHHHHHhhccc
Confidence            4899999999999999999999998873        35789999999999887788889987642100     0   012


Q ss_pred             CCCCCCCcEEEEEEeccEEEeEEec---CCceEEEEeecCCCCCCCeEEEEccC
Q 033147           74 PCAGPVDAFCVLILDPDQVDYLNLK---SNQKLKFMSRLSDNGEKYWASLKTSP  124 (126)
Q Consensus        74 ~~~~~~~nF~vl~~~p~~VD~L~L~---~h~R~~f~~~~~~~~~~~W~~~~l~P  124 (126)
                      ...+.++||+++.|.|++||++++.   .|+|.+|++..     +.|+.++|+|
T Consensus       151 ~~~p~p~~w~g~~l~P~~iEfw~~~~~rlH~R~~y~~~~-----~~W~~~~L~P  199 (199)
T d1dnla_         151 GEVPLPSFWGGFRVSLEQIEFWQGGEHRLHDRFLYQREN-----DAWKIDRLAP  199 (199)
T ss_dssp             SSCCCCTTEEEEEECCSEEEEEECCGGGCCEEEEEEECS-----SSEEEEECCC
T ss_pred             CCCCCCCceEEEEEeccEEEEeCCCCCCCeeEEEEEEcC-----CcEEEEEecC
Confidence            2335799999999999999999987   49999999853     4799999998

>d1ci0a_ b.45.1.1 (A:) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Pyridoxine 5'-phoshate oxidase (PNP oxidase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.67  E-value=7e-17  Score=118.50  Aligned_cols=112  Identities=12%  Similarity=0.223  Sum_probs=87.4

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCC---------CCC
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKE---------FSL   72 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~---------~~~   72 (126)
                      .|++|||+++++.||||+|+|..++++.        -.++|+..+..+|........+.++.+.....         ...
T Consensus        82 ~asl~f~w~~~~rQvRI~G~~~~~~~~~--------sd~yf~~rp~~sqi~a~~s~qs~~~~~~~~l~~~~~~~~~~~~~  153 (205)
T d1ci0a_          82 NAAIVFFWKDLQRQVRVEGITEHVNRET--------SERYFKTRPRGSKIGAWASRQSDVIKNREELDELTQKNTERFKD  153 (205)
T ss_dssp             EEEEEEEETTTTEEEEEEEEEEECCHHH--------HHHHHHHSCHHHHHHHHHCCTTCEESCHHHHHHHHHHHHHHTTS
T ss_pred             ceEEEEechhheeeeeEEEeeecCCHHH--------HHHHHhcCChhhccceecccccccccchhhHHHHHHHHHHHhcc
Confidence            5899999999999999999999999763        36799999999998765555666665422100         001


Q ss_pred             CCCCCCCCcEEEEEEeccEEEeEEec---CCceEEEEeecCCCCCCCeEEEEccC
Q 033147           73 DPCAGPVDAFCVLILDPDQVDYLNLK---SNQKLKFMSRLSDNGEKYWASLKTSP  124 (126)
Q Consensus        73 d~~~~~~~nF~vl~~~p~~VD~L~L~---~h~R~~f~~~~~~~~~~~W~~~~l~P  124 (126)
                      +...+.|+||+++.|.|++||+++..   .|.|.+|++..+   ++.|..+.|+|
T Consensus       154 ~~~~p~P~~wgg~~l~P~~iEFwq~~~~rlH~R~~y~r~~~---~~~W~~~~L~P  205 (205)
T d1ci0a_         154 AEDIPCPDYWGGLRIVPLEIEFWQGRPSRLHDRFVYRRKTE---NDPWKVVRLAP  205 (205)
T ss_dssp             CSSCCCCTTEEEEEEEEEEEEEEECCTTSCCEEEEEECSST---TSCCEEEEECC
T ss_pred             ccCCCCCCceEEEEEeccEEEEecCCCCCCeeEEEEEEcCC---CCceEEEEecC
Confidence            22335789999999999999999876   499999998644   25799999998

>d2a2ja1 b.45.1.1 (A:24-224) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Pyridoxine 5'-phoshate oxidase (PNP oxidase)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.37  E-value=5.3e-13  Score=97.33  Aligned_cols=106  Identities=11%  Similarity=0.110  Sum_probs=82.0

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCC-----C---CC
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEF-----S---LD   73 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~-----~---~d   73 (126)
                      .|.+|||++++..|+||+|+|..++++.        -.++|..-+..+|..-.....+.++++.+....     .   .+
T Consensus        84 ~vsl~f~w~~~~rQvRI~G~a~~l~~~~--------s~~yf~~Rp~~sqi~a~~s~QS~~i~~~~~l~~~~~~~~~~~~~  155 (201)
T d2a2ja1          84 YASATFPWYQLGRQAHVQGPVSKVSTEE--------IFTYWSMRPRGAQLGAWASQQSRPVGSRAQLDNQLAEVTRRFAD  155 (201)
T ss_dssp             EEEEEEEEGGGTEEEEEEEEEEECCHHH--------HHHHHHHSCHHHHHHHHHSCTTCCCCCSHHHHHHHHHHHHHHTT
T ss_pred             ceEEEEechhHhhHHHHHHHHhhcchHH--------HHHHHhccCcccccceeeccccccccchhhhhhhhhhHHHhhcC
Confidence            4889999999999999999999998873        357888888888886655566778765321100     0   11


Q ss_pred             C-CCCCCCcEEEEEEeccEEEeEEec---CCceEEEEeecCCCCCCCeEEEEccC
Q 033147           74 P-CAGPVDAFCVLILDPDQVDYLNLK---SNQKLKFMSRLSDNGEKYWASLKTSP  124 (126)
Q Consensus        74 ~-~~~~~~nF~vl~~~p~~VD~L~L~---~h~R~~f~~~~~~~~~~~W~~~~l~P  124 (126)
                      . .-+.++||+.+.|.|+.||+++.+   -|.|.+|.         .|..+.|.|
T Consensus       156 ~~~ip~P~~w~g~~l~P~~iEFWq~~~~RlHdR~~y~---------~w~~~rL~P  201 (201)
T d2a2ja1         156 QDQIPVPPGWGGYRIAPEIVEFWQGRENRMHNRIRVA---------NGRLERLQP  201 (201)
T ss_dssp             CSSCCCCTTEEEEEECCSEEEEEECCTTSCCEEEEEE---------TTEEEECCT
T ss_pred             CCCCCCCCceEEEEEEeeEEEEcCCCCCCcEeEEEEc---------CCcEEEcCC
Confidence            1 235789999999999999999987   39999995         488888988

>d1nrga_ b.45.1.1 (A:) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Pyridoxine 5'-phoshate oxidase (PNP oxidase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=3.1e-12  Score=93.92  Aligned_cols=115  Identities=14%  Similarity=0.255  Sum_probs=84.3

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCC--------CCCC
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKE--------FSLD   73 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~--------~~~d   73 (126)
                      .|.+|||+|....|+||+|.+..++++..        .++|.+-+..++..=.....+.++.+.+...        ...+
T Consensus        78 ~aal~f~W~~l~RQvRi~G~~~~l~~~~~--------~~yf~~Rp~~sqi~a~~s~QS~~i~~~~~l~~~~~~~~~~~~~  149 (213)
T d1nrga_          78 FASLVFYWEPLNRQVRVEGPVKKLPEEEA--------ECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNEELEQLYQD  149 (213)
T ss_dssp             EEEEEEEEGGGTEEEEEEEEEEECCHHHH--------HHHHHHSCHHHHHHHHHCCTTSCCSCHHHHHHHHHHHHHHTTT
T ss_pred             ceEEEEechhhheeeeeeEeeeecccHhh--------hHHHhcCCcccccceeeccccCCCCCHHHHHHHHHHHHHHccC
Confidence            47899999999999999999999987743        5678888877775433344566665521100        0012


Q ss_pred             CCCCCCCcEEEEEEeccEEEeEEec---CCceEEEEeecCCC----------CCCCeEEEEccC
Q 033147           74 PCAGPVDAFCVLILDPDQVDYLNLK---SNQKLKFMSRLSDN----------GEKYWASLKTSP  124 (126)
Q Consensus        74 ~~~~~~~nF~vl~~~p~~VD~L~L~---~h~R~~f~~~~~~~----------~~~~W~~~~l~P  124 (126)
                      ...+-|++|+.+.|.|++||+++-.   -|.|.+|++.....          .+++|..+.|.|
T Consensus       150 ~~vp~P~~w~Gy~l~P~~iEFwq~~~~RlHdR~~y~R~~~~~~~~~~~~~~~~~~~W~~~rL~P  213 (213)
T d1nrga_         150 QEVPKPKSWGGYVLYPQVMEFWQGQTNRLHDRIVFRRGLPTGDSPLGPMTHRGEEDWLYERLAP  213 (213)
T ss_dssp             SCCCCCTTEEEEEECCSEEEEEECCTTSCCEEEEEEECSSTTSCCCCTTCEECSTTEEEEECCC
T ss_pred             CCCCCCCcceEEEEeccEEEEcCCCCCCcEeEEEEEecCCcccccccccccccCCCeeEEEecC
Confidence            2235689999999999999999987   59999999853311          235799999998

>d2hq7a1 b.45.1.1 (A:2-142) Hypotheical protein CAC3491 {Clostridium acetobutylicum [TaxId: 1488]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Hypotheical protein CAC3491
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=97.94  E-value=2.7e-05  Score=51.98  Aligned_cols=66  Identities=9%  Similarity=0.198  Sum_probs=49.2

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCc
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDA   81 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~n   81 (126)
                      .|.+|||.+....|+||+|+|+++.++       ....++|...   ..+-|    ||.+                ..++
T Consensus        65 ~vsl~~~~~~~~~~v~i~G~a~i~~d~-------~~~~~~w~~~---~~~~~----p~g~----------------~dp~  114 (141)
T d2hq7a1          65 KICLYFVDDNKFAGLMLVGTIEILHDR-------ASKEMLWTDG---CEIYY----PLGI----------------DDPD  114 (141)
T ss_dssp             EEEEEEECSSSSEEEEEEEEEEEECCH-------HHHHHHCCTT---HHHHC----TTGG----------------GCTT
T ss_pred             ccEEEEecCCCceEEEEEEEEEEEcCH-------HHHHHHHHHH---HHHhc----cCCC----------------CCCC
Confidence            478999999999999999999999887       3557788532   23222    2211                1247


Q ss_pred             EEEEEEeccEEEeEEe
Q 033147           82 FCVLILDPDQVDYLNL   97 (126)
Q Consensus        82 F~vl~~~p~~VD~L~L   97 (126)
                      |+||.|.|++++|+.-
T Consensus       115 ~~llri~P~~~~~w~~  130 (141)
T d2hq7a1         115 YTALCFTAEWGNYYRH  130 (141)
T ss_dssp             EEEEEEEEEEEEEEET
T ss_pred             EEEEEEEEeEEEEEcc
Confidence            9999999999999873

>d2i02a1 b.45.1.1 (A:5-147) General stress protein 26 {Nostoc punctiforme pcc 73102 [TaxId: 63737]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: General stress protein 26
species: Nostoc punctiforme pcc 73102 [TaxId: 63737]

Probab=97.88  E-value=4.5e-05  Score=50.74  Aligned_cols=67  Identities=12%  Similarity=0.175  Sum_probs=49.1

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCc
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDA   81 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~n   81 (126)
                      .|.+||+.+....+++|+|+|+|+.+.       ....++|...   .++-|    |+.+                ...+
T Consensus        67 ~vsl~~~~~~~~~~v~i~G~A~iv~d~-------~~~~~~w~~~---~~~~~----~~g~----------------~~p~  116 (143)
T d2i02a1          67 QVNVSFSSPEQQRYVSISGTSQLVKDR-------NKMRELWKPE---LQTWF----PKGL----------------DEPD  116 (143)
T ss_dssp             EEEEEEEETTTTEEEEEEEEEEEECCH-------HHHHHHCCGG---GGGTC----TTGG----------------GCTT
T ss_pred             eEEEEEEeCCCCeEEEEEEEEEEEcCH-------HHHHHHHHHH---HHHhc----cCCC----------------CCCC
Confidence            478999999999999999999999766       3446678432   22211    1111                1246


Q ss_pred             EEEEEEeccEEEeEEec
Q 033147           82 FCVLILDPDQVDYLNLK   98 (126)
Q Consensus        82 F~vl~~~p~~VD~L~L~   98 (126)
                      ++||.|.|+++++++-.
T Consensus       117 ~~liri~p~~~~~wd~~  133 (143)
T d2i02a1         117 IALLKVNINQVNYWDST  133 (143)
T ss_dssp             EEEEEEEEEEEEEEEGG
T ss_pred             EEEEEEEeeEEEEEcCC
Confidence            99999999999999876

>d2fhqa1 b.45.1.1 (A:3-137) Putative general stress protein BT1439 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Putative general stress protein BT1439
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.63  E-value=0.00013  Score=48.09  Aligned_cols=69  Identities=16%  Similarity=0.369  Sum_probs=47.3

Q ss_pred             eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCc
Q 033147            2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDA   81 (126)
Q Consensus         2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~n   81 (126)
                      .|.+||+.+.  .+++|.|+|+++.+.       ....++|+.   ..++-|    ||.+                ..++
T Consensus        64 ~vsl~~~~~~--~~v~i~G~a~i~~d~-------~~~~~~w~~---~~~~~~----~~g~----------------~dp~  111 (135)
T d2fhqa1          64 KAGLCFQEKG--DSVALMGEVEVVTDE-------KLKQELWQD---WFIEHF----PGGP----------------TDPG  111 (135)
T ss_dssp             EEEEEEEETT--EEEEEEEEEEEECCH-------HHHHHSCCG---GGGGTC----TTCT----------------TCTT
T ss_pred             eEEEEEEeCC--CEEEEEEEEEEEeCH-------HHHHHHHHH---HHHHhc----CCCC----------------CCCC
Confidence            3678888774  599999999999876       344667852   222111    2111                1257


Q ss_pred             EEEEEEeccEEEeEEec--CCce
Q 033147           82 FCVLILDPDQVDYLNLK--SNQK  102 (126)
Q Consensus        82 F~vl~~~p~~VD~L~L~--~h~R  102 (126)
                      |+||.|.|++++|+...  .|+|
T Consensus       112 ~~viri~p~~~~~W~~g~~~~~~  134 (135)
T d2fhqa1         112 YVLLKFTANHATYWIEGTFIHKK  134 (135)
T ss_dssp             EEEEEEEEEEEEEEETTEEEEEE
T ss_pred             EEEEEEEEeEEEEEcCCCccccC
Confidence            99999999999999876  4554

>d1rfea_ b.45.1.1 (A:) Hypothetical protein Rv2991 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Hypothetical protein Rv2991
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=87.92  E-value=0.18  Score=32.69  Aligned_cols=76  Identities=7%  Similarity=0.050  Sum_probs=44.6

Q ss_pred             eEEEEEEECCCCe---eEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCC
Q 033147            2 MHQICWYFTESWD---QFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGP   78 (126)
Q Consensus         2 ~~E~~wy~~~t~~---Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~   78 (126)
                      .|.+|++.+....   .+.|.|+|+++.++.       ...+++..+-    .-|.+..++....   .    .+   ..
T Consensus        68 ~v~l~i~~~~~~~~~~~V~v~G~A~iv~d~~-------~~~~~~~~~~----~ky~~~~~~~~~~---~----~~---~~  126 (160)
T d1rfea_          68 RVSFLLEDGDTYDTLRGVSFEGVAEIVEEPE-------ALHRVGVSVW----ERYTGPYTDECKP---M----VD---QM  126 (160)
T ss_dssp             EEEEEEEECSSGGGCEEEEEEEEEEEECCHH-------HHHHHHHHHH----HHHTCCCCGGGHH---H----HH---HH
T ss_pred             eEEEEEEcCCcccceeEEEEEEEEEEeCCHH-------HHHHHHHHHH----HHhcCcCcchhhh---h----hh---cc
Confidence            3678899887665   456999999998763       2233443322    2243332221100   0    00   12


Q ss_pred             CCcEEEEEEeccEEEeEEec
Q 033147           79 VDAFCVLILDPDQVDYLNLK   98 (126)
Q Consensus        79 ~~nF~vl~~~p~~VD~L~L~   98 (126)
                      .+..+++.|.|.+|-.++.+
T Consensus       127 ~~~~~~~ri~p~~i~~wd~~  146 (160)
T d1rfea_         127 MNKRVGVRIVARRTRSWDHR  146 (160)
T ss_dssp             TTTEEEEEEEEEEEEEEEGG
T ss_pred             CCCEEEEEEEEEEEEEEecC
Confidence            35678999999999877654

>d2asfa1 b.45.1.1 (A:11-135) Hypothetical protein Rv2074 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Hypothetical protein Rv2074
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=85.70  E-value=1.4  Score=27.41  Aligned_cols=24  Identities=13%  Similarity=0.061  Sum_probs=18.6

Q ss_pred             EEEEEEECCCCeeEEEEEEEEEEcCC
Q 033147            3 HQICWYFTESWDQFRINGRVDVIDGS   28 (126)
Q Consensus         3 ~E~~wy~~~t~~Q~Ri~G~~~ii~~~   28 (126)
                      |.+|+..+.  ..+.|+|+|+++.++
T Consensus        61 vsl~v~d~~--~~v~i~G~a~i~~D~   84 (125)
T d2asfa1          61 AVLSQVDGA--RWLSLEGRAAVNSDI   84 (125)
T ss_dssp             EEEEEEETT--EEEEEEEEEEEECCH
T ss_pred             EEEEEECCC--cEEEEEEEEEEeCCH
Confidence            566776654  478999999999865

>d1flma_ b.45.1.1 (A:) FMN-binding protein {Desulfovibrio vulgaris, strain Miyazaki F [TaxId: 881]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: FMN-binding protein
species: Desulfovibrio vulgaris, strain Miyazaki F [TaxId: 881]

Probab=84.41  E-value=0.4  Score=30.21  Aligned_cols=27  Identities=11%  Similarity=-0.021  Sum_probs=22.4

Q ss_pred             eEEEEEEECCCC------eeEEEEEEEEEEcCC
Q 033147            2 MHQICWYFTESW------DQFRINGRVDVIDGS   28 (126)
Q Consensus         2 ~~E~~wy~~~t~------~Q~Ri~G~~~ii~~~   28 (126)
                      .|.+++..+++.      .-|||+|+|.++.++
T Consensus        63 ~V~l~~~~~~~~~~~~~~~~~~v~G~A~i~~dg   95 (122)
T d1flma_          63 RVLMTLGSRKVAGRNGPGTGFLIRGSAAFRTDG   95 (122)
T ss_dssp             EEEEEEEEEEEECSSSEEEEEEEEEEEEEESSS
T ss_pred             cEEEEEEccccccccCCceEEEEEEEEEEecCH
Confidence            478899988753      459999999999987