Citrus Sinensis ID: 033180

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-----
Protein Sequence
MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLIR
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHEEEcc
Coil and Loop (DISEMBL)
MDLAELWAIfgpgvagavfGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVrkedidyspyeegEWRLKLWLFLAYVVSFVSLAASVGLLIQDSlvktgpsawtgtagVLQCVFVLIR
Flexible Loop (DISEMBL)
MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKtgpsawtgtagvLQCVFVLIR
Low Complexity Region (SEG)
MDLAELWAIfgpgvagavfgagwwfwIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLIR
Disordered region (IsUnstruct)
***AELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLI*
Disordered Region (DISOPRED)
*****LWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLIR
Disordered Region (DISEMBL)
MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLIR
Disordered Region (DISPRO)
MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLIR
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVLIR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	125	2.2.26 [Sep-21-2011]
Q54T60	156	Transmembrane protein 50	yes	no	0.864	0.692	0.284	1e-08
Q9CXL1	157	Transmembrane protein 50A	yes	no	0.984	0.783	0.304	1e-07
O95807	157	Transmembrane protein 50A	yes	no	0.872	0.694	0.315	3e-07
Q5R4C3	158	Transmembrane protein 50B	no	no	0.872	0.689	0.304	2e-05
A9CAZ8	158	Transmembrane protein 50B	N/A	no	0.872	0.689	0.304	2e-05
P56557	158	Transmembrane protein 50B	no	no	0.872	0.689	0.304	2e-05
Q3SZL9	158	Transmembrane protein 50B	no	no	0.872	0.689	0.304	2e-05
Q9D1X9	158	Transmembrane protein 50B	no	no	0.672	0.531	0.348	2e-05

>sp|Q54T60|TMM50_DICDI Transmembrane protein 50 homolog OS=Dictyostelium discoideum GN=tmem50 PE=3 SV=1

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 65/123 (52%), Gaps = 15/123 (12%)

Query: 12  PGVAGAVFGAGWWFWIDAVVCSSVK----------VSFVHYLPGIFASLAALMFNCVRKE 61
           P +AG +F AGW+ WID  V  +            + +++YLPGIFA+L  +M N V   
Sbjct: 10  PALAGIIFTAGWFLWIDGHVYENTNNKNADFDGPHIQWIYYLPGIFATLGMVMANIVDLS 69

Query: 62  DIDYSP--YEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPS---AWTGTAGV 116
            ++ +   ++ G  ++++WLF+++ +SF  + A++ +++   L     +    W G A  
Sbjct: 70  ALNSNSLLFDGGATKVRVWLFISFAISFGCIGAALWIMVAVFLPPHNTNDAAQWPGIAIT 129

Query: 117 LQC 119
           LQ 
Sbjct: 130 LQT 132

Dictyostelium discoideum (taxid: 44689)

>sp|Q9CXL1|TM50A_MOUSE Transmembrane protein 50A OS=Mus musculus GN=Tmem50a PE=2 SV=1

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 5/128 (3%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVH--YLPGIFASLAALMFNCV 58
           MD  E         AG +F  GWW  IDA V       F H  +  G+ A++A LM N V
Sbjct: 14  MDWGEKRNTIASIAAGVLFFTGWWIIIDAAVMYPRMDQFNHSYHTCGVIATIAFLMINAV 73

Query: 59  RKEDIDYSPYEEG---EWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAG 115
               +    Y EG   +   ++WLF+ ++++F SL AS+ +L    + K     + G A 
Sbjct: 74  SNGQVRGDSYSEGCLGQTGARIWLFIGFMLAFGSLIASMWILFGGYVAKEKDVVYPGIAV 133

Query: 116 VLQCVFVL 123
             Q  F+ 
Sbjct: 134 FFQNAFIF 141

Mus musculus (taxid: 10090)

>sp|O95807|TM50A_HUMAN Transmembrane protein 50A OS=Homo sapiens GN=TMEM50A PE=2 SV=1

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 5/114 (4%)

Query: 15  AGAVFGAGWWFWIDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEEG- 71
           AG +F  GWW  IDA V       F H  +  G+ A++A LM N V    +    Y EG 
Sbjct: 28  AGVLFFTGWWIIIDAAVIYPTMKDFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGC 87

Query: 72  --EWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVL 123
             +   ++WLF+ ++++F SL AS+ +L    + K     + G A   Q  F+ 
Sbjct: 88  LGQTGARIWLFVGFMLAFGSLIASMWILFGGYVAKEKDIVYPGIAVFFQNAFIF 141

Homo sapiens (taxid: 9606)

>sp|Q5R4C3|TM50B_PONAB Transmembrane protein 50B OS=Pongo abelii GN=TMEM50B PE=2 SV=1

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 6/115 (5%)

Query: 14  VAGAVFGAGWWFWIDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEE- 70
           VAG +F  GWW  IDA V         H  +  G+F++LA  M N V    +    YE  
Sbjct: 29  VAGILFFTGWWIMIDAAVVYPKPEQLNHAFHTCGVFSTLAFFMINAVSNAQVRGDSYESG 88

Query: 71  --GEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVL 123
             G    ++WLF+ +++ F SL AS+ +L   + V      + G A   Q   + 
Sbjct: 89  CLGRTGARVWLFIGFMLMFGSLIASMWILF-GAYVTQNTDVYPGLAVFFQNALIF 142

Pongo abelii (taxid: 9601)

>sp|A9CAZ8|TM50B_PAPAN Transmembrane protein 50B OS=Papio anubis GN=TMEM50B PE=4 SV=1

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 6/115 (5%)

Query: 14  VAGAVFGAGWWFWIDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEE- 70
           VAG +F  GWW  IDA V         H  +  G+F++LA  M N V    +    YE  
Sbjct: 29  VAGILFFTGWWIMIDAAVVYPKPEQLNHAFHTCGVFSTLAFFMINAVSNAQVRGDSYESG 88

Query: 71  --GEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVL 123
             G    ++WLF+ +++ F SL AS+ +L   + V      + G A   Q   + 
Sbjct: 89  CLGRTGARVWLFIGFMLMFGSLIASMWILF-GAYVTQNTDVYPGLAVFFQNALIF 142

Papio anubis (taxid: 9555)

>sp|P56557|TM50B_HUMAN Transmembrane protein 50B OS=Homo sapiens GN=TMEM50B PE=1 SV=2

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 6/115 (5%)

Query: 14  VAGAVFGAGWWFWIDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEE- 70
           VAG +F  GWW  IDA V         H  +  G+F++LA  M N V    +    YE  
Sbjct: 29  VAGILFFTGWWIMIDAAVVYPKPEQLNHAFHTCGVFSTLAFFMINAVSNAQVRGDSYESG 88

Query: 71  --GEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVL 123
             G    ++WLF+ +++ F SL AS+ +L   + V      + G A   Q   + 
Sbjct: 89  CLGRTGARVWLFIGFMLMFGSLIASMWILF-GAYVTQNTDVYPGLAVFFQNALIF 142

Homo sapiens (taxid: 9606)

>sp|Q3SZL9|TM50B_BOVIN Transmembrane protein 50B OS=Bos taurus GN=TMEM50B PE=2 SV=1

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 6/115 (5%)

Query: 14  VAGAVFGAGWWFWIDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEE- 70
           VAG +F  GWW  IDA V         H  +  G+F++LA  M N V    +    YE  
Sbjct: 29  VAGILFFTGWWIMIDAAVVYPKPEQLNHAFHTCGVFSTLAFFMINAVSNAQVRGDSYESG 88

Query: 71  --GEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVL 123
             G    ++WLF+ +++ F SL AS+ +L   + V      + G A   Q   + 
Sbjct: 89  CLGRTGARVWLFIGFMLMFGSLIASMWILF-GAYVTQNTDVYPGLAVFFQNALIF 142

Bos taurus (taxid: 9913)

>sp|Q9D1X9|TM50B_MOUSE Transmembrane protein 50B OS=Mus musculus GN=Tmem50b PE=2 SV=1

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 5/89 (5%)

Query: 14  VAGAVFGAGWWFWIDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEE- 70
           VAG +F  GWW  IDA V         H  +  G+F++LA  M N V    +    YE  
Sbjct: 29  VAGILFFTGWWIMIDAAVVYPKPEQLNHAFHTCGVFSTLAFFMINAVSNAQVRGDSYESG 88

Query: 71  --GEWRLKLWLFLAYVVSFVSLAASVGLL 97
             G    ++WLF+ +++ F SL AS+ +L
Sbjct: 89  CLGRTGARVWLFIGFMLMFGSLIASMWIL 117

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	125
284521000	135	transmembrane protein 50a, putative [Jat	1.0	0.925	0.952	8e-62
255545552	143	Transmembrane protein 50A, putative [Ric	1.0	0.874	0.944	9e-62
147777324	135	hypothetical protein VITISV_036866 [Viti	1.0	0.925	0.928	9e-61
225459447	135	PREDICTED: transmembrane protein 50 homo	1.0	0.925	0.92	5e-60
224066885	135	predicted protein [Populus trichocarpa]	1.0	0.925	0.92	1e-59
449445118	135	PREDICTED: transmembrane protein 50 homo	1.0	0.925	0.912	2e-59
18400231	135	uncharacterized protein [Arabidopsis tha	1.0	0.925	0.872	7e-58
356509462	135	PREDICTED: transmembrane protein 50 homo	0.992	0.918	0.870	1e-55
224082214	135	predicted protein [Populus trichocarpa]	1.0	0.925	0.88	4e-55
357461687	135	Salt tolerant protein [Medicago truncatu	1.0	0.925	0.856	4e-55

>gi|284521000|gb|ADB93075.1| transmembrane protein 50a, putative [Jatropha curcas]

 Score =  240 bits (613), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 119/125 (95%), Positives = 120/125 (96%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
           MDLAELWAIFGPGVAGAVFG GWWFWIDAVVCSSVKVSFVHYLPGIFAS AALMFNCVRK
Sbjct: 1   MDLAELWAIFGPGVAGAVFGTGWWFWIDAVVCSSVKVSFVHYLPGIFASFAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLF AYVVSFVSLAASVGLLIQDS+VKTGPS WTGTAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSIVKTGPSVWTGTAGVLQCV 120

Query: 121 FVLIR 125
           FVLI 
Sbjct: 121 FVLIS 125

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545552|ref|XP_002513836.1| Transmembrane protein 50A, putative [Ricinus communis] gi|223546922|gb|EEF48419.1| Transmembrane protein 50A, putative [Ricinus communis]

 Score =  240 bits (612), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 118/125 (94%), Positives = 122/125 (97%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
           MDL ELWAIFGPGVAGAVFGAGWWFW+DAVVCS+VKVSFVHYLPGIFAS+AALMFNCVRK
Sbjct: 1   MDLPELWAIFGPGVAGAVFGAGWWFWVDAVVCSAVKVSFVHYLPGIFASIAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLF AYVVSFVSLAASVGLLIQDSLVK+GPS WTGTAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSLVKSGPSVWTGTAGVLQCV 120

Query: 121 FVLIR 125
           FVLIR
Sbjct: 121 FVLIR 125

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147777324|emb|CAN64948.1| hypothetical protein VITISV_036866 [Vitis vinifera]

 Score =  237 bits (604), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 116/125 (92%), Positives = 121/125 (96%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
           MDLAELWAIFGPG+AGA+FGAGWWFW+DAVVCSSVKVSFVHYLPGIFASLAA+MFN VRK
Sbjct: 1   MDLAELWAIFGPGIAGAIFGAGWWFWVDAVVCSSVKVSFVHYLPGIFASLAAVMFNSVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLF AYVVSFVSLAASVGLLIQDSL K+GPS WTGTAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSLEKSGPSVWTGTAGVLQCV 120

Query: 121 FVLIR 125
           FVLIR
Sbjct: 121 FVLIR 125

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459447|ref|XP_002285830.1| PREDICTED: transmembrane protein 50 homolog [Vitis vinifera] gi|302141881|emb|CBI19084.3| unnamed protein product [Vitis vinifera]

 Score =  234 bits (597), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 115/125 (92%), Positives = 120/125 (96%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
           MDLAELWAIFGPG+AGA+FGAGWWFW+DAVVCSSVKVSFVHYLPGIFASLAA+MFN VRK
Sbjct: 1   MDLAELWAIFGPGIAGAIFGAGWWFWVDAVVCSSVKVSFVHYLPGIFASLAAVMFNSVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLF AYVVSFVSLAASVGLLIQDSL K+GPS WTGTAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSLEKSGPSVWTGTAGVLQCV 120

Query: 121 FVLIR 125
           FVLI 
Sbjct: 121 FVLIS 125

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066885|ref|XP_002302262.1| predicted protein [Populus trichocarpa] gi|222843988|gb|EEE81535.1| predicted protein [Populus trichocarpa]

 Score =  233 bits (593), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 115/125 (92%), Positives = 117/125 (93%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
           MDL ELWAI GP VAGAVFG GWWFWIDAVVCSSV VSFVHYLPGIFAS+AALMFNCVRK
Sbjct: 1   MDLPELWAILGPAVAGAVFGTGWWFWIDAVVCSSVTVSFVHYLPGIFASIAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLF AYVVSFVSLAASVGLLIQDS+VKTGPS WTGTAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSIVKTGPSVWTGTAGVLQCV 120

Query: 121 FVLIR 125
           FVLI 
Sbjct: 121 FVLIS 125

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445118|ref|XP_004140320.1| PREDICTED: transmembrane protein 50 homolog [Cucumis sativus] gi|449525329|ref|XP_004169670.1| PREDICTED: transmembrane protein 50 homolog [Cucumis sativus]

 Score =  232 bits (592), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 114/125 (91%), Positives = 118/125 (94%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
           MDLAELW+IFGPGVAGAVFGAGWWFW+DAVVCSSV VSFVHYLPGIFAS AALMFNCVRK
Sbjct: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLF AYVVSFVSLAASVGLLIQDS+VK GPS WTG AGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAGVLQCV 120

Query: 121 FVLIR 125
           FVL+ 
Sbjct: 121 FVLVS 125

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18400231|ref|NP_564477.1| uncharacterized protein [Arabidopsis thaliana] gi|297846688|ref|XP_002891225.1| hypothetical protein ARALYDRAFT_314063 [Arabidopsis lyrata subsp. lyrata] gi|15292703|gb|AAK92720.1| unknown protein [Arabidopsis thaliana] gi|19310689|gb|AAL85075.1| unknown protein [Arabidopsis thaliana] gi|297337067|gb|EFH67484.1| hypothetical protein ARALYDRAFT_314063 [Arabidopsis lyrata subsp. lyrata] gi|332193763|gb|AEE31884.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  227 bits (578), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 109/125 (87%), Positives = 117/125 (93%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
           MDLAELWAIFGPG +GAVFG GWWFW+DAVVCSS++V FVHYLPGIFASL ALMFNCVRK
Sbjct: 1   MDLAELWAIFGPGFSGAVFGTGWWFWVDAVVCSSIQVPFVHYLPGIFASLGALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
           EDIDYSPY+EGEWRLKLWLF+AYVV+FVSLAASVGLLIQDS+VKTGPS WTG AGV QCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFIAYVVAFVSLAASVGLLIQDSVVKTGPSTWTGVAGVFQCV 120

Query: 121 FVLIR 125
           FVLI 
Sbjct: 121 FVLIS 125

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509462|ref|XP_003523468.1| PREDICTED: transmembrane protein 50 homolog [Glycine max]

 Score =  219 bits (559), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 108/124 (87%), Positives = 114/124 (91%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
           MDL ELWAIFGPGVAGAVFGAGWW W+DAVVCS+V V F+HYLPGIFASLAALMFNCVRK
Sbjct: 1   MDLLELWAIFGPGVAGAVFGAGWWIWLDAVVCSTVTVPFLHYLPGIFASLAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
           EDIDYSPY+EGEWRLKLWLF+AYVVSFVSLA S GLLIQDSL K+ PS WTG AGVLQCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFIAYVVSFVSLAGSAGLLIQDSLDKSAPSVWTGVAGVLQCV 120

Query: 121 FVLI 124
           FVLI
Sbjct: 121 FVLI 124

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082214|ref|XP_002306605.1| predicted protein [Populus trichocarpa] gi|222856054|gb|EEE93601.1| predicted protein [Populus trichocarpa]

 Score =  218 bits (555), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 110/125 (88%), Positives = 113/125 (90%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
           MDL ELWAIFGPGVAGAVFGAGWWFWIDAVVC SV VS      GIFAS+A+LMFNCVRK
Sbjct: 1   MDLPELWAIFGPGVAGAVFGAGWWFWIDAVVCGSVTVSVGFATAGIFASIASLMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLF AYVVSFVSLAASVGLLIQDS+VKTGPS WTGTAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSIVKTGPSVWTGTAGVLQCV 120

Query: 121 FVLIR 125
           FVLI 
Sbjct: 121 FVLIS 125

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357461687|ref|XP_003601125.1| Salt tolerant protein [Medicago truncatula] gi|217071084|gb|ACJ83902.1| unknown [Medicago truncatula] gi|355490173|gb|AES71376.1| Salt tolerant protein [Medicago truncatula] gi|388498854|gb|AFK37493.1| unknown [Medicago truncatula]

 Score =  218 bits (555), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 107/125 (85%), Positives = 112/125 (89%)

Query: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
           MDL ELWAIFGPGVAGAVFGAGWW W+DAVVCSS  V F+HYLPGIFASLA LMFNCVRK
Sbjct: 1   MDLIELWAIFGPGVAGAVFGAGWWIWLDAVVCSSTTVPFLHYLPGIFASLAGLMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
           EDIDYSPY+EGEWRLKLWLF+AYVVSFVSLA S GLLIQDSL K+ PS WTG AGVLQCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFIAYVVSFVSLAGSAGLLIQDSLDKSSPSVWTGIAGVLQCV 120

Query: 121 FVLIR 125
           FVLI 
Sbjct: 121 FVLIS 125

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	125
TAIR|locus:2203089	135	AT1G36980 "AT1G36980" [Arabido	0.992	0.918	0.766	4.2e-47
FB|FBgn0035528	152	CG15012 [Drosophila melanogast	0.776	0.638	0.303	1.2e-08
DICTYBASE|DDB_G0281983	156	tmem50 "TMEM50 family protein"	0.704	0.564	0.279	1.4e-07
UNIPROTKB|E1BSH6	157	TMEM50A "Uncharacterized prote	0.768	0.611	0.306	1e-06
UNIPROTKB|E2RAM1	157	TMEM50A "Uncharacterized prote	0.768	0.611	0.297	1.6e-06
UNIPROTKB|O95807	157	TMEM50A "Transmembrane protein	0.768	0.611	0.297	2.1e-06
UNIPROTKB|I3LRC6	122	TMEM50A "Uncharacterized prote	0.752	0.770	0.303	2.1e-06
RGD|1305638	157	Tmem50a "transmembrane protein	0.768	0.611	0.297	3.4e-06
MGI|MGI:1919067	157	Tmem50a "transmembrane protein	0.768	0.611	0.297	4.3e-06
ASPGD|ASPL0000000636	174	AN6544 [Emericella nidulans (t	0.736	0.528	0.285	5.5e-06

TAIR|locus:2203089 AT1G36980 "AT1G36980" [Arabidopsis thaliana (taxid:3702)]

 Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
 Identities = 95/124 (76%), Positives = 102/124 (82%)

Query:     1 MDLAELWAIXXXXXXXXXXXXXXXXXIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60
             MDLAELWAI                 +DAVVCSS++V FVHYLPGIFASL ALMFNCVRK
Sbjct:     1 MDLAELWAIFGPGFSGAVFGTGWWFWVDAVVCSSIQVPFVHYLPGIFASLGALMFNCVRK 60

Query:    61 EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120
             EDIDYSPY+EGEWRLKLWLF+AYVV+FVSLAASVGLLIQDS+VKTGPS WTG AGV QCV
Sbjct:    61 EDIDYSPYDEGEWRLKLWLFIAYVVAFVSLAASVGLLIQDSVVKTGPSTWTGVAGVFQCV 120

Query:   121 FVLI 124
             FVLI
Sbjct:   121 FVLI 124

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

FB|FBgn0035528 CG15012 [Drosophila melanogaster (taxid:7227)]

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 30/99 (30%), Positives = 54/99 (54%)

Query:    27 IDAV-VCSSVKVSFVHYLPGIFASLAALMFNCVRKEDI-DYSPYEEGEWRLKLWLFLAYV 84
             IDA+ +    +++  H   GIF +++  M N V+ E I D +  E G    K+WL + ++
Sbjct:    37 IDAMSIDGKHQITTGHVFIGIFGTISFCMVNAVKGEHISDENSSESGARIAKIWLLVGFL 96

Query:    85 VSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFVL 123
             + F S+ A++ ++I D +       W G A ++Q VF+L
Sbjct:    97 MGFASIIAAIWVMIDDFINNEKKDGWFGVALLMQNVFIL 135

GO:0004563 "beta-N-acetylhexosaminidase activity" evidence=ISS

DICTYBASE|DDB_G0281983 tmem50 "TMEM50 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 26/93 (27%), Positives = 54/93 (58%)

Query:    37 VSFVHYLPGIFASLAALMFNCVRKEDIDYSP--YEEGEWRLKLWLFLAYVVSFVSLAASV 94
             + +++YLPGIFA+L  +M N V    ++ +   ++ G  ++++WLF+++ +SF  + A++
Sbjct:    45 IQWIYYLPGIFATLGMVMANIVDLSALNSNSLLFDGGATKVRVWLFISFAISFGCIGAAL 104

Query:    95 GLLIQDSLV--KTGPSA-WTGTAGVLQCVFVLI 124
              +++   L    T  +A W G A  LQ   + +
Sbjct:   105 WIMVAVFLPPHNTNDAAQWPGIAITLQTSLIFL 137

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|E1BSH6 TMEM50A "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 31/101 (30%), Positives = 49/101 (48%)

Query:    27 IDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEEG---EWRLKLWLFL 81
             IDA V       F H  +  G+ A++A LM N V    +    Y EG   +   ++WLF+
Sbjct:    40 IDAAVKYPTMEDFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFI 99

Query:    82 AYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFV 122
              ++++F SL AS+ +L    +VK     + G A   Q  F+
Sbjct:   100 GFMMAFGSLIASMWILFGGYVVKEKAVVYPGIAVFFQNAFI 140

GO:0005783 "endoplasmic reticulum" evidence=IEA

UNIPROTKB|E2RAM1 TMEM50A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 30/101 (29%), Positives = 48/101 (47%)

Query:    27 IDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEEG---EWRLKLWLFL 81
             IDA V       F H  +  G+ A++A LM N V    +    Y EG   +   ++WLF+
Sbjct:    40 IDAAVIYPTMEEFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFI 99

Query:    82 AYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFV 122
              ++++F SL AS+ +L    + K     + G A   Q  F+
Sbjct:   100 GFMLAFGSLIASMWILFGGYVAKEKAIVYPGIAVFFQNAFI 140

GO:0005783 "endoplasmic reticulum" evidence=IEA

UNIPROTKB|O95807 TMEM50A "Transmembrane protein 50A" [Homo sapiens (taxid:9606)]

 Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 30/101 (29%), Positives = 48/101 (47%)

Query:    27 IDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEEG---EWRLKLWLFL 81
             IDA V       F H  +  G+ A++A LM N V    +    Y EG   +   ++WLF+
Sbjct:    40 IDAAVIYPTMKDFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFV 99

Query:    82 AYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFV 122
              ++++F SL AS+ +L    + K     + G A   Q  F+
Sbjct:   100 GFMLAFGSLIASMWILFGGYVAKEKDIVYPGIAVFFQNAFI 140

GO:0016021 "integral to membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

UNIPROTKB|I3LRC6 TMEM50A "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 30/99 (30%), Positives = 49/99 (49%)

Query:    27 IDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYEEG---EWRLKLWLFLAY 83
             IDA V      S+ H   G+ A++A LM N V    +    Y EG   +   ++WLF+ +
Sbjct:     9 IDAAVIYXFNHSY-HAC-GVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFIGF 66

Query:    84 VVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFV 122
             +++F SL AS+ +L    + K   + + G A   Q  F+
Sbjct:    67 MLAFGSLIASMWILFGGYVAKEKTTVYPGIAVFFQNAFI 105

GO:0005783 "endoplasmic reticulum" evidence=IEA

RGD|1305638 Tmem50a "transmembrane protein 50A" [Rattus norvegicus (taxid:10116)]

 Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 30/101 (29%), Positives = 48/101 (47%)

Query:    27 IDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEEG---EWRLKLWLFL 81
             IDA V       F H  +  G+ A++A LM N V    +    Y EG   +   ++WLF+
Sbjct:    40 IDAAVMYPNMEQFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFI 99

Query:    82 AYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFV 122
              ++++F SL AS+ +L    + K     + G A   Q  F+
Sbjct:   100 GFMLAFGSLIASMWILFGGYVAKEKAIVYPGIAVFFQNAFI 140

GO:0005737 "cytoplasm" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO

MGI|MGI:1919067 Tmem50a "transmembrane protein 50A" [Mus musculus (taxid:10090)]

 Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 30/101 (29%), Positives = 48/101 (47%)

Query:    27 IDAVVCSSVKVSFVH--YLPGIFASLAALMFNCVRKEDIDYSPYEEG---EWRLKLWLFL 81
             IDA V       F H  +  G+ A++A LM N V    +    Y EG   +   ++WLF+
Sbjct:    40 IDAAVMYPRMDQFNHSYHTCGVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFI 99

Query:    82 AYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCVFV 122
              ++++F SL AS+ +L    + K     + G A   Q  F+
Sbjct:   100 GFMLAFGSLIASMWILFGGYVAKEKDVVYPGIAVFFQNAFI 140

GO:0005737 "cytoplasm" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ASPGD|ASPL0000000636 AN6544 [Emericella nidulans (taxid:162425)]

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 28/98 (28%), Positives = 50/98 (51%)

Query:    33 SSVKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYE-EGE---WRLKLWLFLAYVVSFV 88
             S+V V FV ++PGI ++L  L+ N + K  +    +   G    W+ +  LFL + +   
Sbjct:    55 STVHVKFVDWIPGICSALGMLVINSIEKSRLQADSFSYSGNGVAWKARFVLFLGFALLAG 114

Query:    89 SLAASVGLLIQDSLVKTGP--SAWTGTAGVLQCVFVLI 124
              LA SV +++   L+K  P  + + G A V+    V++
Sbjct:   115 GLAGSVTVMVLKYLIKNYPLPTLYFGIANVIANGLVML 152

GO:0032511 "late endosome to vacuole transport via multivesicular body sorting pathway" evidence=IEA

GO:0006623 "protein targeting to vacuole" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0000329 "fungal-type vacuole membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0034424 "Vps55/Vps68 complex" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	125
pfam05255	165	pfam05255, UPF0220, Uncharacterized protein family	1e-21

>gnl|CDD|218522 pfam05255, UPF0220, Uncharacterized protein family (UPF0220)

 Score = 83.9 bits (208), Expect = 1e-21
 Identities = 48/128 (37%), Positives = 68/128 (53%), Gaps = 12/128 (9%)

Query: 9   IFGPGVAGAVFGAGWWFWIDAVV------CSSVKVSFVHYLPGIFASLAALMFNCVRKE- 61
             G  +AGA+F  GWW  IDA V       S V ++FV ++PGI ++L  LM N + K  
Sbjct: 22  SVGVYLAGALFALGWWILIDAAVYSKKNNASDVHITFVDWIPGICSTLGMLMVNSIEKSR 81

Query: 62  ---DIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVK--TGPSAWTGTAGV 116
              D   S    G W  ++WLFL + + F  L AS+ +LI   +VK    P+ W G A V
Sbjct: 82  LRGDSLSSGGSSGAWGARVWLFLGFALLFGGLIASIWVLILKYVVKDYEKPTLWPGVANV 141

Query: 117 LQCVFVLI 124
           LQ V +++
Sbjct: 142 LQNVLIML 149

This family of proteins is functionally uncharacterized. Length = 165

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	125
PF05255	166	UPF0220: Uncharacterised protein family (UPF0220);	100.0
KOG3393	157	consensus Predicted membrane protein [Function unk	100.0

>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised

Probab=100.00  E-value=5.6e-50  Score=305.97  Aligned_cols=124  Identities=43%  Similarity=0.824  Sum_probs=116.3

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc------ccccchhhhHHHHHHHHHHHhcccCCccccCCCC----ch
Q 033180            2 DLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSV------KVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYE----EG   71 (125)
Q Consensus         2 ~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~~~~------~~~f~~~ipgi~stlgm~mvN~V~~~~l~~~~~~----~~   71 (125)
                      |.++.||++++|+||+||++|||++|||++++++      |++|+||+||||||+||+|+|+|||+||++|+++    .+
T Consensus        16 ~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~V~~~~l~~~~~~~~~~~~   95 (166)
T PF05255_consen   16 DWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNSVSKSRLRGDSYSESGCGG   95 (166)
T ss_pred             CchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhccccHHHhcCCCCCCCCCch
Confidence            5788999999999999999999999999999865      8999999999999999999999999999977653    36


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc--CCCcccchHHHHHhhhhhhcC
Q 033180           72 EWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVK--TGPSAWTGTAGVLQCVFVLIR  125 (125)
Q Consensus        72 ~~~aR~~LFigf~l~fggl~~s~~ili~~yv~~--~~~~~~~Gva~vlqn~lI~~s  125 (125)
                      .||||+|||+||+++|||++||+|||+.||++|  ++++.|||||+|+||++||+|
T Consensus        96 ~~~aR~~LFigf~l~fggl~~s~~vli~~yv~~~~~~~~~~~Gva~vlqN~lI~~S  151 (166)
T PF05255_consen   96 AWRARLWLFIGFALSFGGLAGSVWVLILKYVVPQYTKPTLWPGVANVLQNALIFLS  151 (166)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcccccHHHHHHHHHHHH
Confidence            799999999999999999999999999999998  578999999999999999986

>KOG3393 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=1.9e-47  Score=287.33  Aligned_cols=122  Identities=36%  Similarity=0.677  Sum_probs=111.8

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC--cccccchhhhHHHHHHHHHHHhcccCCccccCCCCc---hhHHHH
Q 033180            2 DLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSS--VKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYEE---GEWRLK   76 (125)
Q Consensus         2 ~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~~~--~~~~f~~~ipgi~stlgm~mvN~V~~~~l~~~~~~~---~~~~aR   76 (125)
                      |.++.||.+.  +||+||++|||++|||+++++  +|+||+||+|++|||++++|||+|||+|+++|+|++   ++++||
T Consensus        15 ~~~~rrn~v~--~aG~LFf~GwWi~iDAa~~~~~~~~~t~~~~i~~v~stl~~~mVNaI~~~~vsgds~a~g~sga~~AR   92 (157)
T KOG3393|consen   15 DWGERRNAVA--VAGALFFTGWWIMIDAALISPKSEQITFVYWIIGVFSTLAFLMVNAISNSQVSGDSYAEGCSGARGAR   92 (157)
T ss_pred             cccccccchH--HHHHHHHHHHHHhhhhhhccCcccceeeeeehhHHHHHHHHHhheccccceecCCcccccccccchhh
Confidence            4556666554  999999999999999999975  699999999999999999999999999999999865   569999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhcccccCCCc-ccchHHHHHhhhhhhcC
Q 033180           77 LWLFLAYVVSFVSLAASVGLLIQDSLVKTGPS-AWTGTAGVLQCVFVLIR  125 (125)
Q Consensus        77 ~~LFigf~l~fggl~~s~~ili~~yv~~~~~~-~~~Gva~vlqn~lI~~s  125 (125)
                      +|||+||+|+||||+||+||||.||++++++. +|||+|+++||++||+|
T Consensus        93 ~wLfiGF~l~fgsLias~wVli~~yv~~~~~~~v~~GvA~~~~N~~i~~s  142 (157)
T KOG3393|consen   93 IWLFIGFALLFGSLIASIWVLIGKYVVKEYDGKVWPGVANFLQNVLIFFS  142 (157)
T ss_pred             hHHHHHHHHHHhhhhhhHHHHhHHHHhcCCCCcccccHHHHHHHHHHHHH
Confidence            99999999999999999999999999987665 79999999999999986

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00