Citrus Sinensis ID: 033233

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120----
Protein Sequence
MALRRAVLDHVRVPVQTLALTGSKQRWSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHPMAS
Secondary Structure (PSIPRED)
cHHHHHHHHHHcccccHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHcccccccHHHHccccHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHccccccccccccccccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccHHHcccccEccccccccHHHHHHHHHHHHHHHcccccHHHHccccEHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MALRRAVLDHVRVPVQTLALTGSKQRWSVLGslrfmsshddhltkeEVIDRVLSVVkcfpkvdpsqvtpdvhfqkdlgldsldNVEIVMALEEEfkleipdkeavRIDACNLAIEYIYNHPMAS
Flexible Loop (DISEMBL)
malrravldhvrvpvqtlaltgskqrwSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCFPkvdpsqvtpdvhfqkdlgldsLDNVEIVMALEeefkleipdkeaVRIDACNLAIEYIYNHPMAS
Low Complexity Region (SEG)
MALRRAVLDHVRVPVQTLALTGSKQRWSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHPMAS
Disordered region (IsUnstruct)
*****AVLDHVRVPVQTLALTGSKQRWSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYN*****
Disordered Region (DISOPRED)
**LR***LDHV***********************************EVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEY*YNH****
Disordered Region (DISEMBL)
MALRRAVLDHVRVPVQTLALTGSKQRWSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHPMAS
Disordered Region (DISPRO)
******VLDHVRVPVQTLALTGSKQRWSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALRRAVLDHVRVPVQTLALTGSKQRWSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHPMAS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	124	2.2.26 [Sep-21-2011]
P53665	122	Acyl carrier protein 1, m	yes	no	0.983	1.0	0.733	5e-48
O80800	126	Acyl carrier protein 2, m	no	no	0.967	0.952	0.539	2e-25
P11943	134	Acyl carrier protein, mit	N/A	no	0.911	0.843	0.452	3e-20
Q9FGJ4	131	Acyl carrier protein 3, m	no	no	0.951	0.900	0.366	8e-17
Q85FZ0	91	Acyl carrier protein OS=C	N/A	no	0.629	0.857	0.487	7e-16
Q10217	112	Putative acyl carrier pro	yes	no	0.693	0.767	0.489	2e-15
P32463	125	Acyl carrier protein, mit	yes	no	0.709	0.704	0.442	3e-15
Q54E22	120	Acyl carrier protein, mit	yes	no	0.653	0.675	0.463	1e-14
Q0MQC3	156	Acyl carrier protein, mit	yes	no	0.604	0.480	0.506	2e-14
O14561	156	Acyl carrier protein, mit	yes	no	0.604	0.480	0.506	2e-14

>sp|P53665|ACPM1_ARATH Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MTACP1 PE=2 SV=1

 Score =  189 bits (479), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 91/124 (73%), Positives = 107/124 (86%), Gaps = 2/124 (1%)

Query: 1   MALRRAVLDHVRVPVQTLALTGSKQRWSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCFP 60
           MALR A+L H+RVPVQTL L  SK  +  LG++R  SSHDDHL++E V+DRVL VVK FP
Sbjct: 1   MALRNAILRHLRVPVQTLGLNQSKIGF--LGTIRSFSSHDDHLSREAVVDRVLDVVKSFP 58

Query: 61  KVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH 120
           KVDPS+VTP+VHFQ DLGLDSLD VEIVMA+EEEFKLEIPDKEA +ID+C+LAIEY+YNH
Sbjct: 59  KVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYVYNH 118

Query: 121 PMAS 124
           PM+S
Sbjct: 119 PMSS 122

Carrier of the growing fatty acid chain in fatty acid biosynthesis (By similarity). May be involved in the synthesis of short and medium chain fatty acids. Accessory and non-catalytic subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), which functions in the transfer of electrons from NADH to the respiratory chain.
Arabidopsis thaliana (taxid: 3702)

>sp|O80800|ACPM2_ARATH Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=1 SV=1

 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/128 (53%), Positives = 83/128 (64%), Gaps = 8/128 (6%)

Query: 1   MALRRAVLDHVRVPVQTLALTGSKQRWSVLGS---LRFMSS--HDDHLTKEEVIDRVLSV 55
           MA R A+L ++RV V     T    R  VL     LR  S       L K EV DRVLSV
Sbjct: 1   MAARGAMLRYLRVNVNP---TIQNPRECVLPFSILLRRFSEEVRGSFLDKSEVTDRVLSV 57

Query: 56  VKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIE 115
           VK F KVDPS+VTP  +FQ DLGLDSLD+VE+VMALEEEF  EIPD EA +I + +LA++
Sbjct: 58  VKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVD 117

Query: 116 YIYNHPMA 123
           +I +HP A
Sbjct: 118 FIASHPQA 125

Carrier of the growing fatty acid chain in fatty acid biosynthesis (By similarity). May be involved in the synthesis of short and medium chain fatty acids. Accessory and non-catalytic subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), which functions in the transfer of electrons from NADH to the respiratory chain.

Arabidopsis thaliana (taxid: 3702)

>sp|P11943|ACPM_NEUCR Acyl carrier protein, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-12 PE=1 SV=2

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 72/115 (62%), Gaps = 2/115 (1%)

Query: 11  VRVPVQTLALTGSKQRWSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCFPKV-DPSQVTP 69
           VR  V   A   +  + +   ++RF S+   HL K+EV  R+  V+  F KV DP  +T 
Sbjct: 21  VRAGVARPAFVQAVPKVAAFQAVRFYSA-GGHLKKDEVFSRIAQVLSGFDKVNDPKNITE 79

Query: 70  DVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHPMAS 124
             HF  DLGLDSLD VE+VMA+EEEF +EIPDK+A +I + + A+EYI + P A+
Sbjct: 80  TAHFANDLGLDSLDTVEVVMAIEEEFSIEIPDKDADQIHSVDKAVEYILSQPDAN 134

Carrier of the growing fatty acid chain in fatty acid biosynthesis (By similarity). May be involved in the synthesis of very-long-chain fatty acids. Accessory and non-catalytic subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), which functions in the transfer of electrons from NADH to the respiratory chain.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

>sp|Q9FGJ4|ACPM3_ARATH Acyl carrier protein 3, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=2 SV=1

 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 2/120 (1%)

Query: 3   LRRAVLDHVR--VPVQTLALTGSKQRWSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCFP 60
           +R ++L H+R  V V+  +L  ++  +  +G   F S       +++++ RV+ +VK + 
Sbjct: 4   IRSSILQHLRLRVSVRPTSLLQNENGFKSIGIFNFTSEAAADGGQDQILSRVIELVKKYD 63

Query: 61  KVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH 120
           K + S+VT    FQKDL LDSLD  E+VMA+EEEF +EIPD++A ++  C     YI + 
Sbjct: 64  KTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATYILSE 123

Carrier of the growing fatty acid chain in fatty acid biosynthesis (By similarity). May be involved in the synthesis of short and medium chain fatty acids. Accessory and non-catalytic subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), which functions in the transfer of electrons from NADH to the respiratory chain.

Arabidopsis thaliana (taxid: 3702)

>sp|Q85FZ0|ACP_CYAME Acyl carrier protein OS=Cyanidioschyzon merolae GN=acpP PE=3 SV=1

 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 38/78 (48%), Positives = 55/78 (70%)

Query: 43  LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
           +T+++++D+V S+V     V+ SQ++P+  F  DLG DSLDNVE+VMA+EEEF LEIPD 
Sbjct: 1   MTEQQILDKVQSIVSEQLGVERSQISPNASFTHDLGADSLDNVELVMAMEEEFDLEIPDS 60

Query: 103 EAVRIDACNLAIEYIYNH 120
            A +I     A++YI  H
Sbjct: 61  AAEQITTIQQAVDYILQH 78

Carrier of the growing fatty acid chain in fatty acid biosynthesis.

Cyanidioschyzon merolae (taxid: 45157)

>sp|Q10217|ACPM_SCHPO Putative acyl carrier protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4H3.09 PE=3 SV=1

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/92 (48%), Positives = 58/92 (63%), Gaps = 6/92 (6%)

Query: 33  LRFMSSHDDHLTKEEVIDRVLSVVKCFPKV-DPSQVTPDVHFQKDLGLDSLDNVEIVMAL 91
           LRF S     + + +   R+L VV  F K+ DP +VTP   F  DLGLDSLD VE+VMA+
Sbjct: 25  LRFYS-----VARPDAEKRILKVVSSFDKIQDPKKVTPTSTFANDLGLDSLDAVEVVMAI 79

Query: 92  EEEFKLEIPDKEAVRIDACNLAIEYIYNHPMA 123
           EEEF ++IPDK+A  I +   AI YI  +P A
Sbjct: 80  EEEFSIQIPDKDADEITSVGDAISYITKNPEA 111

Carrier of the growing fatty acid chain in fatty acid biosynthesis (By similarity). May be involved in the synthesis of very-long-chain fatty acids.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P32463|ACPM_YEAST Acyl carrier protein, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ACP1 PE=1 SV=1

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 64/95 (67%), Gaps = 7/95 (7%)

Query: 34  RFMSSHDDHLTKEEVIDRVLSVVKCFPKVDPS----QVTPDVHFQKDLGLDSLDNVEIVM 89
           RF S++   L+K++V  RV+ V+K F K  P+    Q++ D  F KDLGLDSLD VE+++
Sbjct: 34  RFYSAN---LSKDQVSQRVIDVIKAFDKNSPNIANKQISSDTQFHKDLGLDSLDTVELLV 90

Query: 90  ALEEEFKLEIPDKEAVRIDACNLAIEYIYNHPMAS 124
           A+EEEF +EIPDK A  + +    ++YI ++P A+
Sbjct: 91  AIEEEFDIEIPDKVADELRSVGETVDYIASNPDAN 125

Carrier of the growing fatty acid chain in fatty acid biosynthesis (By similarity). May be involved in the synthesis of very-long-chain fatty acids. Accessory and non-catalytic subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), which functions in the transfer of electrons from NADH to the respiratory chain.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q54E22|ACPM_DICDI Acyl carrier protein, mitochondrial OS=Dictyostelium discoideum GN=ndufab1 PE=3 SV=1

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 56/82 (68%), Gaps = 1/82 (1%)

Query: 42  HLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPD 101
            ++++E+ DRV+ VV  + KV    VTP   F K+LGLDSLD+ +I++A+EEEF +EIPD
Sbjct: 39  SISEKEITDRVIGVVSQYDKVSGKTVTPTTTF-KELGLDSLDSADILVAVEEEFGIEIPD 97

Query: 102 KEAVRIDACNLAIEYIYNHPMA 123
           +EA +I +C   I Y+   P A
Sbjct: 98  EEADKITSCAETISYLRKTPTA 119

Carrier of the growing fatty acid chain in fatty acid biosynthesis. May be involved in the synthesis of very-long-chain fatty acids. Accessory and non-catalytic subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), which functions in the transfer of electrons from NADH to the respiratory chain.

Dictyostelium discoideum (taxid: 44689)

>sp|Q0MQC3|ACPM_PANTR Acyl carrier protein, mitochondrial OS=Pan troglodytes GN=NDUFAB1 PE=2 SV=1

 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 54/75 (72%)

Query: 43  LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
           LT E + DRVL V+K + K+DP +++ + HF KDLGLDSLD VEI+MA+E+EF  EIPD 
Sbjct: 74  LTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDI 133

Query: 103 EAVRIDACNLAIEYI 117
           +A ++      ++YI
Sbjct: 134 DAEKLMCPQEIVDYI 148

Carrier of the growing fatty acid chain in fatty acid biosynthesis in mitochondria. Accessory and non-catalytic subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), which functions in the transfer of electrons from NADH to the respiratory chain.

Pan troglodytes (taxid: 9598)

>sp|O14561|ACPM_HUMAN Acyl carrier protein, mitochondrial OS=Homo sapiens GN=NDUFAB1 PE=1 SV=3

 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 54/75 (72%)

Query: 43  LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
           LT E + DRVL V+K + K+DP +++ + HF KDLGLDSLD VEI+MA+E+EF  EIPD 
Sbjct: 74  LTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDI 133

Query: 103 EAVRIDACNLAIEYI 117
           +A ++      ++YI
Sbjct: 134 DAEKLMCPQEIVDYI 148

Carrier of the growing fatty acid chain in fatty acid biosynthesis in mitochondria. Accessory and non-catalytic subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), which functions in the transfer of electrons from NADH to the respiratory chain.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	124
224137194	122	predicted protein [Populus trichocarpa]	0.983	1.0	0.782	6e-48
118487082	122	unknown [Populus trichocarpa]	0.983	1.0	0.774	1e-47
449487570	126	PREDICTED: acyl carrier protein 1, mitoc	1.0	0.984	0.753	7e-47
15224918	122	acyl carrier protein 1 [Arabidopsis thal	0.983	1.0	0.733	2e-46
210110108	124	acyl carrier protein 3-3 [Arachis hypoga	1.0	1.0	0.741	4e-46
357507891	119	Acyl carrier protein [Medicago truncatul	0.959	1.0	0.75	5e-46
210109926	124	acyl carrier protein 3-1 [Arachis hypoga	1.0	1.0	0.733	6e-46
210110001	124	acyl carrier protein 3-2 [Arachis hypoga	1.0	1.0	0.741	6e-46
297824487	122	mtACP-1 [Arabidopsis lyrata subsp. lyrat	0.983	1.0	0.725	7e-46
225453262	124	PREDICTED: acyl carrier protein 1, mitoc	0.983	0.983	0.777	1e-45

>gi|224137194|ref|XP_002327065.1| predicted protein [Populus trichocarpa] gi|222835380|gb|EEE73815.1| predicted protein [Populus trichocarpa]

 Score =  194 bits (493), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 97/124 (78%), Positives = 108/124 (87%), Gaps = 2/124 (1%)

Query: 1   MALRRAVLDHVRVPVQTLALTGSKQRWSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCFP 60
           MALR AVL HVRV VQT  L  +   W+  GS+R MSSHDDHLTKEEV +RVLSV+K FP
Sbjct: 1   MALRAAVLRHVRVAVQTRELKSNP--WAPSGSIRLMSSHDDHLTKEEVAERVLSVIKSFP 58

Query: 61  KVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH 120
           KVDPS+VTP+VHFQKDLGLDSLD+VEIVMALEEEFKLEIPDKEA RID+CNLAIEYI+NH
Sbjct: 59  KVDPSRVTPEVHFQKDLGLDSLDSVEIVMALEEEFKLEIPDKEADRIDSCNLAIEYIHNH 118

Query: 121 PMAS 124
           P+AS
Sbjct: 119 PLAS 122

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118487082|gb|ABK95371.1| unknown [Populus trichocarpa]

 Score =  193 bits (490), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 96/124 (77%), Positives = 108/124 (87%), Gaps = 2/124 (1%)

Query: 1   MALRRAVLDHVRVPVQTLALTGSKQRWSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCFP 60
           MALR AVL HVRV VQT  L  +   W+  GS+R MSSHDDHLTKEEV +RVLSV+K FP
Sbjct: 1   MALRAAVLRHVRVAVQTRELKSNP--WAPSGSIRLMSSHDDHLTKEEVAERVLSVIKSFP 58

Query: 61  KVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH 120
           KVDPS+VTP+VHFQKDLGLDSLD+VEIVMALEEEFKLEIPDKEA +ID+CNLAIEYI+NH
Sbjct: 59  KVDPSRVTPEVHFQKDLGLDSLDSVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYIHNH 118

Query: 121 PMAS 124
           P+AS
Sbjct: 119 PLAS 122

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449487570|ref|XP_004157692.1| PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis sativus]

 Score =  191 bits (484), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 95/126 (75%), Positives = 109/126 (86%), Gaps = 2/126 (1%)

Query: 1   MALRRAVLDHVRVPVQTLALTGSKQRWSVL--GSLRFMSSHDDHLTKEEVIDRVLSVVKC 58
           MALR AVL H+RVPVQ  AL   + + ++   GSLR  SSHDDHLTK+EVI+RVLSV+KC
Sbjct: 1   MALRAAVLRHLRVPVQFYALARRECQPTLCSGGSLRLFSSHDDHLTKDEVIERVLSVIKC 60

Query: 59  FPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIY 118
            PKVDPS+V+PDVHF+KDLGLDSLD VEIVMALEEEFKLEIPDKEA +ID+CNLAIEY+Y
Sbjct: 61  HPKVDPSKVSPDVHFEKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120

Query: 119 NHPMAS 124
           NHPMAS
Sbjct: 121 NHPMAS 126

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15224918|ref|NP_181990.1| acyl carrier protein 1 [Arabidopsis thaliana] gi|1703091|sp|P53665.1|ACPM1_ARATH RecName: Full=Acyl carrier protein 1, mitochondrial; AltName: Full=MtACP-1; Short=ACP; AltName: Full=NADH-ubiquinone oxidoreductase 9.6 kDa subunit; Flags: Precursor gi|903689|gb|AAB96840.1| acyl carrier protein precursor [Arabidopsis thaliana] gi|3341682|gb|AAC27464.1| acyl carrier protein [Arabidopsis thaliana] gi|330255354|gb|AEC10448.1| acyl carrier protein 1 [Arabidopsis thaliana]

 Score =  189 bits (479), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 91/124 (73%), Positives = 107/124 (86%), Gaps = 2/124 (1%)

Query: 1   MALRRAVLDHVRVPVQTLALTGSKQRWSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCFP 60
           MALR A+L H+RVPVQTL L  SK  +  LG++R  SSHDDHL++E V+DRVL VVK FP
Sbjct: 1   MALRNAILRHLRVPVQTLGLNQSKIGF--LGTIRSFSSHDDHLSREAVVDRVLDVVKSFP 58

Query: 61  KVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH 120
           KVDPS+VTP+VHFQ DLGLDSLD VEIVMA+EEEFKLEIPDKEA +ID+C+LAIEY+YNH
Sbjct: 59  KVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYVYNH 118

Query: 121 PMAS 124
           PM+S
Sbjct: 119 PMSS 122

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|210110108|gb|ACJ07136.1| acyl carrier protein 3-3 [Arachis hypogaea] gi|284808867|gb|ADB94681.1| acyl carrier protein 3 [Arachis hypogaea] gi|284808869|gb|ADB94682.1| acyl carrier protein 3 [Arachis hypogaea] gi|284808871|gb|ADB94683.1| acyl carrier protein 3 [Arachis hypogaea]

 Score =  188 bits (477), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 92/124 (74%), Positives = 105/124 (84%)

Query: 1   MALRRAVLDHVRVPVQTLALTGSKQRWSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCFP 60
           MALR A+L HVRVP+QT      KQ    L S RFMSSHDDH+TKEEV +RVL+V++ +P
Sbjct: 1   MALRAAILRHVRVPLQTAPKLHHKQPQPWLASFRFMSSHDDHITKEEVTERVLAVLRDYP 60

Query: 61  KVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH 120
           KVDPS+VTP+VHF+KDLGLDSLD VEIVMALEEEFKLEIPDKEA +ID+CNLAIEYI NH
Sbjct: 61  KVDPSKVTPNVHFEKDLGLDSLDTVEIVMALEEEFKLEIPDKEAEKIDSCNLAIEYISNH 120

Query: 121 PMAS 124
           PMAS
Sbjct: 121 PMAS 124

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357507891|ref|XP_003624234.1| Acyl carrier protein [Medicago truncatula] gi|355499249|gb|AES80452.1| Acyl carrier protein [Medicago truncatula]

 Score =  188 bits (477), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 93/124 (75%), Positives = 109/124 (87%), Gaps = 5/124 (4%)

Query: 1   MALRRAVLDHVRVPVQTLALTGSKQRWSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCFP 60
           MALR A+L HVR+P+Q+   T   Q W+  GS+R MSSHDDH+TKEEV++RVLSV+K FP
Sbjct: 1   MALRAAILRHVRIPIQS---TPKLQPWN--GSIRSMSSHDDHITKEEVVERVLSVIKDFP 55

Query: 61  KVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH 120
           KVDPS+VTP+VHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEA +ID+C+LAIEYI NH
Sbjct: 56  KVDPSKVTPEVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCHLAIEYISNH 115

Query: 121 PMAS 124
           PM+S
Sbjct: 116 PMSS 119

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|210109926|gb|ACJ07134.1| acyl carrier protein 3-1 [Arachis hypogaea] gi|284808863|gb|ADB94679.1| acyl carrier protein 3 [Arachis hypogaea] gi|288816953|gb|ADC55285.1| mitochondrial acyl carrier protein [Arachis hypogaea]

 Score =  187 bits (476), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 91/124 (73%), Positives = 105/124 (84%)

Query: 1   MALRRAVLDHVRVPVQTLALTGSKQRWSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCFP 60
           MALR A+L HVR+P+QT      KQ    L S RFMSSHDDH+TKEEV +RVL+V++ +P
Sbjct: 1   MALRAAILRHVRIPLQTAPKLHHKQPQPWLASFRFMSSHDDHITKEEVTERVLAVLRDYP 60

Query: 61  KVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH 120
           KVDPS+VTP+VHF+KDLGLDSLD VEIVMALEEEFKLEIPDKEA +ID+CNLAIEYI NH
Sbjct: 61  KVDPSKVTPNVHFEKDLGLDSLDTVEIVMALEEEFKLEIPDKEAEKIDSCNLAIEYISNH 120

Query: 121 PMAS 124
           PMAS
Sbjct: 121 PMAS 124

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|210110001|gb|ACJ07135.1| acyl carrier protein 3-2 [Arachis hypogaea] gi|284808865|gb|ADB94680.1| acyl carrier protein 3 [Arachis hypogaea]

 Score =  187 bits (475), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 92/124 (74%), Positives = 105/124 (84%)

Query: 1   MALRRAVLDHVRVPVQTLALTGSKQRWSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCFP 60
           MALR A+L HVRVP+QT      KQ    L S RFMSSHDDH+TKEEV +RVL+V++ +P
Sbjct: 1   MALRAAILRHVRVPLQTAPKLHHKQPQPWLASFRFMSSHDDHITKEEVTERVLAVLRDYP 60

Query: 61  KVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH 120
           KVDPS+VTP+VHF+KDLGLDSLD VEIVMALEEEFKLEIPDKEA +ID+CNLAIEYI NH
Sbjct: 61  KVDPSKVTPNVHFEKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYISNH 120

Query: 121 PMAS 124
           PMAS
Sbjct: 121 PMAS 124

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824487|ref|XP_002880126.1| mtACP-1 [Arabidopsis lyrata subsp. lyrata] gi|297325965|gb|EFH56385.1| mtACP-1 [Arabidopsis lyrata subsp. lyrata]

 Score =  187 bits (475), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 90/124 (72%), Positives = 106/124 (85%), Gaps = 2/124 (1%)

Query: 1   MALRRAVLDHVRVPVQTLALTGSKQRWSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCFP 60
           MALR A+L H+RVPVQ+L L  S+     LGS+R  SSHDDHL++E V+DRVL VVK FP
Sbjct: 1   MALRNAILRHLRVPVQSLGLNQSQ--IGFLGSIRSFSSHDDHLSREAVVDRVLDVVKSFP 58

Query: 61  KVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH 120
           KVDPS+VTP+VHFQ DLGLDSLD VEIVMA+EEEFKLEIPDKEA +ID+C+LAIEY+YNH
Sbjct: 59  KVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYVYNH 118

Query: 121 PMAS 124
           PM+S
Sbjct: 119 PMSS 122

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453262|ref|XP_002266315.1| PREDICTED: acyl carrier protein 1, mitochondrial [Vitis vinifera] gi|297734676|emb|CBI16727.3| unnamed protein product [Vitis vinifera]

 Score =  186 bits (473), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 98/126 (77%), Positives = 105/126 (83%), Gaps = 4/126 (3%)

Query: 1   MALRRAVLDHVRVPV-QTLALTGSKQRWSVLGSLRFMSSH-DDHLTKEEVIDRVLSVVKC 58
           MALR A+L H+RVPV QTLA   +   W     +R MSSH DDHL KEEVI+RVLSVVK 
Sbjct: 1   MALRAAILRHIRVPVLQTLAPASTASNWQRW--IRPMSSHGDDHLQKEEVIERVLSVVKS 58

Query: 59  FPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIY 118
           FPKVDPSQVT DVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEA +ID+CNLAIEYIY
Sbjct: 59  FPKVDPSQVTADVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYIY 118

Query: 119 NHPMAS 124
           NHPMA 
Sbjct: 119 NHPMAG 124

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	124
TAIR|locus:2042331	122	MTACP-1 "AT2G44620" [Arabidops	0.983	1.0	0.733	2.4e-44
TAIR|locus:2206300	126	mtACP2 "AT1G65290" [Arabidopsi	0.967	0.952	0.523	2e-24
UNIPROTKB|G4N818	145	MGG_03484 "Acyl carrier protei	0.661	0.565	0.530	2.8e-18
TAIR|locus:2168968	131	mtACP3 "AT5G47630" [Arabidopsi	0.927	0.877	0.376	5.3e-17
UNIPROTKB|E2RJ92	154	NDUFAB1 "Acyl carrier protein"	0.604	0.487	0.506	1.3e-15
SGD|S000001675	125	ACP1 "Mitochondrial matrix acy	0.709	0.704	0.442	1.3e-15
UNIPROTKB|F1SAB6	156	NDUFAB1 "Uncharacterized prote	0.604	0.480	0.506	1.6e-15
POMBASE|SPAC4H3.09	112	SPAC4H3.09 "mitochondrial type	0.693	0.767	0.489	1.6e-15
UNIPROTKB|G3X6L0	156	NDUFAB1 "Acyl carrier protein,	0.604	0.480	0.506	2e-15
UNIPROTKB|P52505	156	NDUFAB1 "Acyl carrier protein,	0.604	0.480	0.506	2e-15

TAIR|locus:2042331 MTACP-1 "AT2G44620" [Arabidopsis thaliana (taxid:3702)]

 Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
 Identities = 91/124 (73%), Positives = 107/124 (86%)

Query:     1 MALRRAVLDHVRVPVQTLALTGSKQRWSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCFP 60
             MALR A+L H+RVPVQTL L  SK  +  LG++R  SSHDDHL++E V+DRVL VVK FP
Sbjct:     1 MALRNAILRHLRVPVQTLGLNQSKIGF--LGTIRSFSSHDDHLSREAVVDRVLDVVKSFP 58

Query:    61 KVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH 120
             KVDPS+VTP+VHFQ DLGLDSLD VEIVMA+EEEFKLEIPDKEA +ID+C+LAIEY+YNH
Sbjct:    59 KVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYVYNH 118

Query:   121 PMAS 124
             PM+S
Sbjct:   119 PMSS 122

GO:0000036 "ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA;ISS;IDA

GO:0031177 "phosphopantetheine binding" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IDA

GO:0010267 "production of ta-siRNAs involved in RNA interference" evidence=RCA

GO:0035196 "production of miRNAs involved in gene silencing by miRNA" evidence=RCA

GO:0051607 "defense response to virus" evidence=RCA

TAIR|locus:2206300 mtACP2 "AT1G65290" [Arabidopsis thaliana (taxid:3702)]

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 67/128 (52%), Positives = 86/128 (67%)

Query:     1 MALRRAVLDHVRVPVQTLALTGSKQ---RWSVLGSLRFMSSH--DDHLTKEEVIDRVLSV 55
             MA R A+L ++RV V    +   ++    +S+L  LR  S       L K EV DRVLSV
Sbjct:     1 MAARGAMLRYLRVNVNP-TIQNPRECVLPFSIL--LRRFSEEVRGSFLDKSEVTDRVLSV 57

Query:    56 VKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIE 115
             VK F KVDPS+VTP  +FQ DLGLDSLD+VE+VMALEEEF  EIPD EA +I + +LA++
Sbjct:    58 VKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVD 117

Query:   116 YIYNHPMA 123
             +I +HP A
Sbjct:   118 FIASHPQA 125

GO:0000036 "ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA;ISS

GO:0031177 "phosphopantetheine binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0050897 "cobalt ion binding" evidence=IDA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

UNIPROTKB|G4N818 MGG_03484 "Acyl carrier protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 44/83 (53%), Positives = 62/83 (74%)

Query:    43 LTKEEVIDRVLSVVKCFPKV-DPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPD 101
             L K +V  R++S+++ F KV DPS++ P  HF  DLGLDSLD VE+VMA+EEEF +EIPD
Sbjct:    63 LDKPQVEGRIISLLQKFDKVNDPSKIQPSSHFANDLGLDSLDTVEVVMAIEEEFSIEIPD 122

Query:   102 KEAVRIDACNLAIEYIYNHPMAS 124
             K+A +I + + A+EYI + P A+
Sbjct:   123 KDADQIHSVDKAVEYILSQPDAN 145

GO:0005575 "cellular_component" evidence=ND

TAIR|locus:2168968 mtACP3 "AT5G47630" [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 44/117 (37%), Positives = 71/117 (60%)

Query:     3 LRRAVLDHVR--VPVQTLALTGSKQRWSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCFP 60
             +R ++L H+R  V V+  +L  ++  +  +G   F S       +++++ RV+ +VK + 
Sbjct:     4 IRSSILQHLRLRVSVRPTSLLQNENGFKSIGIFNFTSEAAADGGQDQILSRVIELVKKYD 63

Query:    61 KVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYI 117
             K + S+VT    FQKDL LDSLD  E+VMA+EEEF +EIPD++A ++  C     YI
Sbjct:    64 KTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATYI 120

GO:0000036 "ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0006633 "fatty acid biosynthetic process" evidence=IEA;ISS

GO:0010267 "production of ta-siRNAs involved in RNA interference" evidence=RCA

GO:0035196 "production of miRNAs involved in gene silencing by miRNA" evidence=RCA

GO:0051607 "defense response to virus" evidence=RCA

UNIPROTKB|E2RJ92 NDUFAB1 "Acyl carrier protein" [Canis lupus familiaris (taxid:9615)]

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 38/75 (50%), Positives = 54/75 (72%)

Query:    43 LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
             LT E + DRVL V+K + K+DP +++ + HF KDLGLDSLD VEI+MA+E+EF  EIPD 
Sbjct:    72 LTLEGIKDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDT 131

Query:   103 EAVRIDACNLAIEYI 117
             +A ++      ++YI
Sbjct:   132 DAEKLMCPQEIVDYI 146

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

SGD|S000001675 ACP1 "Mitochondrial matrix acyl carrier protein" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 42/95 (44%), Positives = 64/95 (67%)

Query:    34 RFMSSHDDHLTKEEVIDRVLSVVKCFPKVDPS----QVTPDVHFQKDLGLDSLDNVEIVM 89
             RF S++   L+K++V  RV+ V+K F K  P+    Q++ D  F KDLGLDSLD VE+++
Sbjct:    34 RFYSAN---LSKDQVSQRVIDVIKAFDKNSPNIANKQISSDTQFHKDLGLDSLDTVELLV 90

Query:    90 ALEEEFKLEIPDKEAVRIDACNLAIEYIYNHPMAS 124
             A+EEEF +EIPDK A  + +    ++YI ++P A+
Sbjct:    91 AIEEEFDIEIPDKVADELRSVGETVDYIASNPDAN 125

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0000036 "ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process" evidence=ISS

GO:0070469 "respiratory chain" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0022900 "electron transport chain" evidence=IEA

GO:0009107 "lipoate biosynthetic process" evidence=IMP

UNIPROTKB|F1SAB6 NDUFAB1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 38/75 (50%), Positives = 54/75 (72%)

Query:    43 LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
             LT E + DRVL V+K + K+DP +++ + HF KDLGLDSLD VEI+MA+E+EF  EIPD 
Sbjct:    74 LTLEAIKDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDI 133

Query:   103 EAVRIDACNLAIEYI 117
             +A ++      ++YI
Sbjct:   134 DAEKLMCPQEIVDYI 148

GO:0009249 "protein lipoylation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

POMBASE|SPAC4H3.09 SPAC4H3.09 "mitochondrial type II fatty acid synthase component (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 45/92 (48%), Positives = 58/92 (63%)

Query:    33 LRFMSSHDDHLTKEEVIDRVLSVVKCFPKV-DPSQVTPDVHFQKDLGLDSLDNVEIVMAL 91
             LRF S     + + +   R+L VV  F K+ DP +VTP   F  DLGLDSLD VE+VMA+
Sbjct:    25 LRFYS-----VARPDAEKRILKVVSSFDKIQDPKKVTPTSTFANDLGLDSLDAVEVVMAI 79

Query:    92 EEEFKLEIPDKEAVRIDACNLAIEYIYNHPMA 123
             EEEF ++IPDK+A  I +   AI YI  +P A
Sbjct:    80 EEEFSIQIPDKDADEITSVGDAISYITKNPEA 111

GO:0005739 "mitochondrion" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

GO:0022900 "electron transport chain" evidence=IEA

GO:0048037 "cofactor binding" evidence=ISM

UNIPROTKB|G3X6L0 NDUFAB1 "Acyl carrier protein, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 38/75 (50%), Positives = 54/75 (72%)

Query:    43 LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
             LT E + DRVL V+K + K+DP +++ + HF KDLGLDSLD VEI+MA+E+EF  EIPD 
Sbjct:    74 LTLEGIKDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDI 133

Query:   103 EAVRIDACNLAIEYI 117
             +A ++      ++YI
Sbjct:   134 DAEKLMCPQEIVDYI 148

GO:0009249 "protein lipoylation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

UNIPROTKB|P52505 NDUFAB1 "Acyl carrier protein, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 38/75 (50%), Positives = 54/75 (72%)

Query:    43 LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
             LT E + DRVL V+K + K+DP +++ + HF KDLGLDSLD VEI+MA+E+EF  EIPD 
Sbjct:    74 LTLEGIKDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDI 133

Query:   103 EAVRIDACNLAIEYI 117
             +A ++      ++YI
Sbjct:   134 DAEKLMCPQEIVDYI 148

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=TAS

GO:0006120 "mitochondrial electron transport, NADH to ubiquinone" evidence=TAS

GO:0005504 "fatty acid binding" evidence=IDA

GO:0031966 "mitochondrial membrane" evidence=IDA

GO:0016491 "oxidoreductase activity" evidence=TAS

GO:0006633 "fatty acid biosynthetic process" evidence=TAS

GO:0005759 "mitochondrial matrix" evidence=IDA

GO:0005747 "mitochondrial respiratory chain complex I" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P53665	ACPM1_ARATH	No assigned EC number	0.7338	0.9838	1.0	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_400150	RecName- Full=Acyl carrier protein;; Carrier of the growing fatty acid chain in fatty acid biosynthesis (By similarity) (122 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pg.C_LG_IX0832	[acyl-carrier protein] S-malonyltransferase (EC-2.3.1.39) (371 aa)	•						•		0.571
	grail3.7185000101	Predicted protein (325 aa)	•						•		0.515

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	124
PTZ00171	148	PTZ00171, PTZ00171, acyl carrier protein; Provisio	2e-23
TIGR00517	77	TIGR00517, acyl_carrier, acyl carrier protein	7e-23
CHL00124	82	CHL00124, acpP, acyl carrier protein; Validated	7e-21
PRK00982	78	PRK00982, acpP, acyl carrier protein; Provisional	1e-19
COG0236	80	COG0236, AcpP, Acyl carrier protein [Lipid metabol	9e-16
PRK12449	80	PRK12449, PRK12449, acyl carrier protein; Provisio	4e-09
PRK06508	93	PRK06508, PRK06508, acyl carrier protein; Provisio	3e-07
pfam00550	66	pfam00550, PP-binding, Phosphopantetheine attachme	2e-05
PRK05350	82	PRK05350, PRK05350, acyl carrier protein; Provisio	4e-04
smart00823	86	smart00823, PKS_PP, Phosphopantetheine attachment	4e-04
PRK07081	83	PRK07081, PRK07081, acyl carrier protein; Provisio	5e-04
PRK05828	84	PRK05828, PRK05828, acyl carrier protein; Validate	0.003
PRK08172	82	PRK08172, PRK08172, putative acyl carrier protein	0.004

>gnl|CDD|240304 PTZ00171, PTZ00171, acyl carrier protein; Provisional

 Score = 87.8 bits (218), Expect = 2e-23
 Identities = 43/81 (53%), Positives = 59/81 (72%)

Query: 43  LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
           L+KE+V+ RV  VVK F KVD S++TP+ +F KDLG DSLD VE+++A+E+EF L IPD 
Sbjct: 66  LSKEDVLTRVKKVVKNFEKVDASKITPESNFVKDLGADSLDVVELLIAIEQEFNLTIPDH 125

Query: 103 EAVRIDACNLAIEYIYNHPMA 123
           +A +I     AI+YI  + MA
Sbjct: 126 DAEKIKTVQDAIDYIEQNNMA 146

Length = 148

>gnl|CDD|213536 TIGR00517, acyl_carrier, acyl carrier protein

 Score = 84.4 bits (209), Expect = 7e-23
 Identities = 36/77 (46%), Positives = 51/77 (66%)

Query: 45  KEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEA 104
            +E+ ++V +++K    VD  Q+T D  F +DLG DSLD VE+VMALEEEF +EIPD+EA
Sbjct: 1   MQEIFEKVKAIIKEQLNVDEDQITTDARFVEDLGADSLDTVELVMALEEEFDIEIPDEEA 60

Query: 105 VRIDACNLAIEYIYNHP 121
            +I     A+ YI  + 
Sbjct: 61  EKIATVGDAVNYIEENQ 77

This small protein has phosphopantetheine covalently bound to a Ser residue. It acts as a carrier of the growing fatty acid chain, which is bound to the prosthetic group, during fatty acid biosynthesis. Homologous phosphopantetheine-binding domains are found in longer proteins. Acyl carrier proteins scoring above the noise cutoff but below the trusted cutoff may be specialized versions. These include those involved in mycolic acid biosynthesis in the Mycobacteria, lipid A biosynthesis in Rhizobium, actinorhodin polyketide synthesis in Streptomyces coelicolor, etc. This protein is not found in the Archaea.Gene name acpP.S (Ser) at position 37 in the seed alignment, in the motif DSLD, is the phosphopantetheine attachment site [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 77

>gnl|CDD|177047 CHL00124, acpP, acyl carrier protein; Validated

 Score = 79.3 bits (196), Expect = 7e-21
 Identities = 33/74 (44%), Positives = 53/74 (71%)

Query: 44  TKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKE 103
           TK ++ ++V S+V     ++ S+VT D +F +DLG DSLD VE+VMA+EE+F +EIPD++
Sbjct: 2   TKNDIFEKVQSIVAEQLGIEKSEVTLDANFTRDLGADSLDVVELVMAIEEKFDIEIPDED 61

Query: 104 AVRIDACNLAIEYI 117
           A +I     A+++I
Sbjct: 62  AEKISTLQEAVDFI 75

Length = 82

>gnl|CDD|179197 PRK00982, acpP, acyl carrier protein; Provisional

 Score = 76.0 bits (188), Expect = 1e-19
 Identities = 35/76 (46%), Positives = 49/76 (64%)

Query: 45  KEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEA 104
             E+ ++V  ++     VD  +VTP+  F  DLG DSLD VE+VMALEEEF +EIPD++A
Sbjct: 1   MSEIFEKVKKIIVEQLGVDEEEVTPEASFVDDLGADSLDTVELVMALEEEFGIEIPDEDA 60

Query: 105 VRIDACNLAIEYIYNH 120
            +I     A++YI  H
Sbjct: 61  EKIKTVGDAVDYIEKH 76

Length = 78

>gnl|CDD|223314 COG0236, AcpP, Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 66.5 bits (163), Expect = 9e-16
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query: 43  LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
              E + +RV  ++     VD  ++T +  F +DLGLDSLD VE+VMALEEEF +EIPD+
Sbjct: 1   SQMEAIEERVKDIIAEQLGVDEEEITTEASFVEDLGLDSLDLVELVMALEEEFGIEIPDE 60

Query: 103 EAVRIDACNLAIEYIYNH 120
           E   I      ++YI   
Sbjct: 61  ELENIKTVGDLVDYIEEL 78

Length = 80

>gnl|CDD|183533 PRK12449, PRK12449, acyl carrier protein; Provisional

 Score = 49.3 bits (118), Expect = 4e-09
 Identities = 19/81 (23%), Positives = 48/81 (59%), Gaps = 6/81 (7%)

Query: 43  LTKEEVIDRVLSVVK---CFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEI 99
           +T+EE+ +R++++++    +  +    +T   H + DL +DS++ VE ++ +E+EF + I
Sbjct: 1   MTREEIFERLINLIQKQRSYLSLA---ITEQTHLKDDLAVDSIELVEFIINVEDEFHIAI 57

Query: 100 PDKEAVRIDACNLAIEYIYNH 120
           PD++   + +    ++Y+   
Sbjct: 58  PDEDVEDMVSMGDLLDYLVQR 78

Length = 80

>gnl|CDD|180597 PRK06508, PRK06508, acyl carrier protein; Provisional

 Score = 44.8 bits (106), Expect = 3e-07
 Identities = 17/51 (33%), Positives = 32/51 (62%)

Query: 50  DRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIP 100
           D+V  ++     +    +TP+ H   DLG+DSLD ++IV A+++ F +++P
Sbjct: 6   DKVADIIAETSDIPRDTITPESHTIDDLGIDSLDFLDIVFAIDKAFGIKLP 56

Length = 93

>gnl|CDD|215989 pfam00550, PP-binding, Phosphopantetheine attachment site

 Score = 39.5 bits (93), Expect = 2e-05
 Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 1/38 (2%)

Query: 63  DPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIP 100
            P ++ PD     DLGLDSL  VE++  LEEEF +EIP
Sbjct: 13  IPDEIDPDDDL-FDLGLDSLLAVELLARLEEEFGVEIP 49

A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Vibrio anguillarum angR has the attachment serine replaced by an alanine. Length = 66

>gnl|CDD|180033 PRK05350, PRK05350, acyl carrier protein; Provisional

 Score = 36.1 bits (84), Expect = 4e-04
 Identities = 21/63 (33%), Positives = 41/63 (65%), Gaps = 9/63 (14%)

Query: 43 LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALE---------E 93
          +T+EE+++R+ +++    ++DP  +TP+ +  +DL LDS+D V++V+ L+         E
Sbjct: 2  MTREEILERLRAILVELFEIDPEDITPEANLYEDLDLDSIDAVDLVVHLQKLTGKKIKPE 61

Query: 94 EFK 96
          EFK
Sbjct: 62 EFK 64

Length = 82

>gnl|CDD|214834 smart00823, PKS_PP, Phosphopantetheine attachment site

 Score = 36.5 bits (85), Expect = 4e-04
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 63  DPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIP 100
               + PD  F +DLGLDSL  VE+   LE    L +P
Sbjct: 29  AAEAIDPDRPF-RDLGLDSLMAVELRNRLEAATGLRLP 65

Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. Length = 86

>gnl|CDD|180828 PRK07081, PRK07081, acyl carrier protein; Provisional

 Score = 36.1 bits (84), Expect = 5e-04
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 13/80 (16%)

Query: 46  EEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDL---GLDSLDNVEIVMALEEEFKLEIPDK 102
           +  I  +L  V     V    +  D     DL   GL SL  V++++A+E+ F +EIPD+
Sbjct: 2   KNTIRTILKKVAKLE-VPIDSIADD----ADLYEAGLSSLATVQLMLAIEDAFDIEIPDE 56

Query: 103 EAVR-----IDACNLAIEYI 117
              R     IDA   A+  +
Sbjct: 57  MLNRKLFASIDALAGAVTQL 76

Length = 83

>gnl|CDD|180278 PRK05828, PRK05828, acyl carrier protein; Validated

 Score = 34.1 bits (78), Expect = 0.003
 Identities = 13/45 (28%), Positives = 26/45 (57%)

Query: 75  KDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYN 119
           ++L +DSLD   I+++LE EF +E  D++ +++      I  +  
Sbjct: 33  RELKIDSLDMFSIIVSLESEFNIEFSDEKLMKLKNLADLILEVKE 77

Length = 84

>gnl|CDD|181266 PRK08172, PRK08172, putative acyl carrier protein IacP; Validated

 Score = 33.7 bits (77), Expect = 0.004
 Identities = 18/48 (37%), Positives = 24/48 (50%)

Query: 51 RVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLE 98
          RV  V+     VD   +    H  +DL  DSLD ++IV  L EEF + 
Sbjct: 8  RVKKVITSCIAVDVDSINGQTHLVEDLYADSLDLIDIVFGLSEEFDIS 55

Length = 82

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	124
KOG1748	131	consensus Acyl carrier protein/NADH-ubiquinone oxi	99.86
PRK05350	82	acyl carrier protein; Provisional	99.82
CHL00124	82	acpP acyl carrier protein; Validated	99.82
PRK07117	79	acyl carrier protein; Validated	99.82
PRK12449	80	acyl carrier protein; Provisional	99.81
PTZ00171	148	acyl carrier protein; Provisional	99.8
PRK05883	91	acyl carrier protein; Validated	99.8
PRK05828	84	acyl carrier protein; Validated	99.8
PRK07639	86	acyl carrier protein; Provisional	99.8
PRK08172	82	putative acyl carrier protein IacP; Validated	99.79
TIGR00517	77	acyl_carrier acyl carrier protein. S (Ser) at posi	99.75
COG0236	80	AcpP Acyl carrier protein [Lipid metabolism / Seco	99.71
PRK00982	78	acpP acyl carrier protein; Provisional	99.68
PRK09184	89	acyl carrier protein; Provisional	99.68
PRK06508	93	acyl carrier protein; Provisional	99.67
PRK05087	78	D-alanine--poly(phosphoribitol) ligase subunit 2;	99.57
PRK07081	83	acyl carrier protein; Provisional	99.57
PF00550	67	PP-binding: Phosphopantetheine attachment site; In	99.56
TIGR01688	73	dltC D-alanine--poly(phosphoribitol) ligase, subun	99.28
PF14573	96	PP-binding_2: Acyl-carrier; PDB: 3CE7_A.	99.17
smart00823	86	PKS_PP Phosphopantetheine attachment site. Phospho	98.79
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.77
PRK06060	705	acyl-CoA synthetase; Validated	98.41
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.28
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.24
PRK10252	1296	entF enterobactin synthase subunit F; Provisional	98.11
COG3433	74	Aryl carrier domain [Secondary metabolites biosynt	97.93
PRK12467	3956	peptide synthase; Provisional	97.92
PRK12467	3956	peptide synthase; Provisional	97.86
PRK12316	5163	peptide synthase; Provisional	97.85
PRK05691	4334	peptide synthase; Validated	97.8
PRK05691	4334	peptide synthase; Validated	97.76
PRK12316	5163	peptide synthase; Provisional	97.7
PF07377	111	DUF1493: Protein of unknown function (DUF1493); In	97.54
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	96.62
PF10501	112	Ribosomal_L50: Ribosomal subunit 39S; InterPro: IP	95.85
TIGR02372	386	4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv	94.78
KOG1178	1032	consensus Non-ribosomal peptide synthetase/alpha-a	86.14

>KOG1748 consensus Acyl carrier protein/NADH-ubiquinone oxidoreductase, NDUFAB1/SDAP subunit [Energy production and conversion; Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.86  E-value=2.7e-22  Score=140.94  Aligned_cols=119  Identities=46%  Similarity=0.628  Sum_probs=97.5

Q ss_pred             HHHhhcccccccccccccccccchhh----hhccccCCCC-CCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCC
Q 033233            6 AVLDHVRVPVQTLALTGSKQRWSVLG----SLRFMSSHDD-HLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLD   80 (124)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlD   80 (124)
                      ..+.+.+.-+.+|++.++..+-...+    ..++|+...+ ..+++++.++|..++..+..++++.++.+++|..|||+|
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~s~~~p~~l~k~~v~~RVl~VVk~~dki~~~k~~~~s~f~~DLGlD   86 (131)
T KOG1748|consen    7 LSLQRLSSRISTPSSLAQQAPSFNFGRTTGLLRSYSAELPRCLAKKEVVDRVLDVVKKFDKIDPSKLTTDSDFFKDLGLD   86 (131)
T ss_pred             HHHHHHhhhhcccchhhhcCcccCcccchhHHHHHhhhhhhhhhHHHHHHHHHHHHHHhhcCCccccchhhHHHHhcCCc
Confidence            33444444455555554444333322    2677776665 589999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCCCCC
Q 033233           81 SLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHPMAS  124 (124)
Q Consensus        81 SL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~~a~  124 (124)
                      ||+.+|++++|||+||++||+++..++.|+++.++||.++.+.+
T Consensus        87 SLD~VEiVMAlEEEFgiEIpd~dAdki~t~~da~~yI~~~~d~k  130 (131)
T KOG1748|consen   87 SLDTVEIVMALEEEFGIEIPDEDADKIKTVRDAADYIADKPDVK  130 (131)
T ss_pred             ccccchhhhhhHHHhCCccCcchhhhhCCHHHHHHHHHhccccc
Confidence            99999999999999999999999999999999999999987653

>PRK05350 acyl carrier protein; Provisional

Probab=99.82  E-value=1.6e-20  Score=122.67  Aligned_cols=81  Identities=23%  Similarity=0.432  Sum_probs=77.6

Q ss_pred             CCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           42 HLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        42 ~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      .|+++++.++|++++++.++++++.|+++++|.++|||||+++++++.+||++|||+|+++++..+.|++++++||.+++
T Consensus         1 ~m~~~~i~~~v~~ii~~~~~~~~~~i~~d~~l~~dlg~DSld~veli~~lE~~fgI~i~~~~~~~~~Tv~dlv~~v~~~~   80 (82)
T PRK05350          1 MMTREEILERLRAILVELFEIDPEDITPEANLYEDLDLDSIDAVDLVVHLQKLTGKKIKPEEFKSVRTVQDVVDAVERLL   80 (82)
T ss_pred             CCCHHHHHHHHHHHHHHHhCCCHHHCCCCccchhhcCCCHHHHHHHHHHHHHHHCCccCHHHHhhcCcHHHHHHHHHHHh
Confidence            38999999999999999999999999999998789999999999999999999999999999999999999999999876


Q ss_pred             C
Q 033233          122 M  122 (124)
Q Consensus       122 ~  122 (124)
                      +
T Consensus        81 ~   81 (82)
T PRK05350         81 K   81 (82)
T ss_pred             c
Confidence            5

>CHL00124 acpP acyl carrier protein; Validated

Probab=99.82  E-value=2.7e-20  Score=121.19  Aligned_cols=82  Identities=40%  Similarity=0.651  Sum_probs=78.4

Q ss_pred             CCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCCC
Q 033233           43 LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHPM  122 (124)
Q Consensus        43 M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~~  122 (124)
                      |+++++.+++++++++.++++++.++++++|.+++||||+++++|+..+|++|||+++.+++.++.|++++++||.++++
T Consensus         1 M~~~~i~~~l~~ii~~~~~~~~~~i~~d~~l~~dlg~DSl~~~eli~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~   80 (82)
T CHL00124          1 MTKNDIFEKVQSIVAEQLGIEKSEVTLDANFTRDLGADSLDVVELVMAIEEKFDIEIPDEDAEKISTLQEAVDFISQKIN   80 (82)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCHHHCCCCcchhhhcCCcHHHHHHHHHHHHHHHCCccCHHHHHHcCCHHHHHHHHHHHhc
Confidence            78999999999999999999999999999998779999999999999999999999999999999999999999999877


Q ss_pred             CC
Q 033233          123 AS  124 (124)
Q Consensus       123 a~  124 (124)
                      .|
T Consensus        81 ~~   82 (82)
T CHL00124         81 KK   82 (82)
T ss_pred             cC
Confidence            64

>PRK07117 acyl carrier protein; Validated

Probab=99.82  E-value=3.9e-20  Score=120.69  Aligned_cols=78  Identities=24%  Similarity=0.391  Sum_probs=74.6

Q ss_pred             CCHHHHHHHHHHHHhhcC-CCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           43 LTKEEVIDRVLSVVKCFP-KVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        43 M~~~ei~~~l~~il~e~l-~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      |++++|+++|++++.+.+ ++++++|+++++|. +||+|||+++++++.+|++||++||++++.++.|++++++||.++.
T Consensus         1 M~~~ei~~~v~~ii~e~~p~i~~~~I~~~~~l~-DLg~DSlD~veiv~~led~f~i~I~~~~~~~i~Tv~d~v~~i~~~~   79 (79)
T PRK07117          1 MDKQRIFDILVRHIREVLPDLDQHQFQPEDSLV-DLGANSMDRAEIVIMTLESLSLKIPLVEFAGAKNIGELADLLYAKL   79 (79)
T ss_pred             CCHHHHHHHHHHHHHHHcCCCCHHHCCCCCChh-hcCCChHHHHHHHHHHHHHHCCccCHHHHHhcCCHHHHHHHHHHhC
Confidence            789999999999999999 79999999999996 7999999999999999999999999999999999999999998763

>PRK12449 acyl carrier protein; Provisional

Probab=99.81  E-value=9.8e-20  Score=118.00  Aligned_cols=79  Identities=24%  Similarity=0.525  Sum_probs=76.1

Q ss_pred             CCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           43 LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        43 M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      |++++|.+++++++++.++++...++++++|.+++||||+++++|+.++|++|||.|+++++.++.|++++++||.+++
T Consensus         1 m~~~~i~~~l~~il~~~~~~~~~~i~~~~~l~~dlg~DSl~~~~li~~lE~~f~i~i~~~~~~~~~ti~~l~~~l~~~~   79 (80)
T PRK12449          1 MTREEIFERLINLIQKQRSYLSLAITEQTHLKDDLAVDSIELVEFIINVEDEFHIAIPDEDVEDMVSMGDLLDYLVQRL   79 (80)
T ss_pred             CCHHHHHHHHHHHHHHHhCCCccccCCCCcHHHHcCCcHHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHHhc
Confidence            7899999999999999999999999999999889999999999999999999999999999999999999999998764

>PTZ00171 acyl carrier protein; Provisional

Probab=99.80  E-value=8.6e-20  Score=131.67  Aligned_cols=90  Identities=49%  Similarity=0.722  Sum_probs=84.9

Q ss_pred             cccCCCCCCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHH
Q 033233           35 FMSSHDDHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAI  114 (124)
Q Consensus        35 ~~~~~~~~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv  114 (124)
                      ....+.+.|+++++.++|++++++.++++++.++++++|.+++|||||++++|+.+||++|||+||++++.++.|+++++
T Consensus        58 ~~~~~~~~~~~~~v~~~l~eiiae~l~vd~~~I~~ds~~~~dLg~DSLd~veLv~~LEdeFgI~Ipded~~~i~TV~dlv  137 (148)
T PTZ00171         58 SSKSKQYLLSKEDVLTRVKKVVKNFEKVDASKITPESNFVKDLGADSLDVVELLIAIEQEFNLTIPDHDAEKIKTVQDAI  137 (148)
T ss_pred             hhcccccccCHHHHHHHHHHHHHHHhCCCHhhCCCCcchhhhcCCCHHHHHHHHHHHHHHHCCccCHHHHHHCCCHHHHH
Confidence            35678899999999999999999999999999999999988999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCC
Q 033233          115 EYIYNHPMAS  124 (124)
Q Consensus       115 ~~I~~~~~a~  124 (124)
                      +||.++.+.|
T Consensus       138 d~V~~~~~~~  147 (148)
T PTZ00171        138 DYIEQNNMAK  147 (148)
T ss_pred             HHHHHHHhcc
Confidence            9999887654

>PRK05883 acyl carrier protein; Validated

Probab=99.80  E-value=1.7e-19  Score=120.41  Aligned_cols=83  Identities=23%  Similarity=0.281  Sum_probs=78.7

Q ss_pred             CCCCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHc
Q 033233           40 DDHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYN  119 (124)
Q Consensus        40 ~~~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~  119 (124)
                      ..++++++|.++++++|++.++++++.|+++++|.++||||||++++++.+||++|||+|+++++.++.||+++++||.+
T Consensus         7 ~~~~~~~~I~~~l~~iia~~l~v~~~~I~~d~~l~~dlg~DSL~~v~lv~~lE~~fgI~i~~ee~~~~~TV~dl~~~v~~   86 (91)
T PRK05883          7 AMTSSPSTVSATLLSILRDDLNVDLTRVTPDARLVDDVGLDSVAFAVGMVAIEERLGVALSEEDLLSCDTVGDLEAAIAA   86 (91)
T ss_pred             CCCCCHHHHHHHHHHHHHHHhCCChhhCCCCCchhhccCCChHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHH
Confidence            44668999999999999999999999999999998899999999999999999999999999999999999999999988


Q ss_pred             CCC
Q 033233          120 HPM  122 (124)
Q Consensus       120 ~~~  122 (124)
                      ++.
T Consensus        87 ~~~   89 (91)
T PRK05883         87 KVR   89 (91)
T ss_pred             Hcc
Confidence            764

>PRK05828 acyl carrier protein; Validated

Probab=99.80  E-value=1.8e-19  Score=118.87  Aligned_cols=80  Identities=20%  Similarity=0.315  Sum_probs=75.2

Q ss_pred             CCHHHHHHHHHHHHhh-cCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           43 LTKEEVIDRVLSVVKC-FPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        43 M~~~ei~~~l~~il~e-~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      |++++|+++|++++++ .++++.+.++.+++|. +||+|||++++++.+||++|||+||++++.++.|++++++||.+++
T Consensus         1 m~~~eI~~~i~~ii~e~~~~~~~d~i~~~~~~~-dLg~DSLd~velv~~lE~~f~I~i~~e~~~~i~Tv~d~~~~v~~~~   79 (84)
T PRK05828          1 MQEMEILLKIKEIAKKKNFAVTLDESNINKPYR-ELKIDSLDMFSIIVSLESEFNIEFSDEKLMKLKNLADLILEVKELK   79 (84)
T ss_pred             CCHHHHHHHHHHHHHHhccCCCcccccCCCCHH-hcCCCHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHH
Confidence            8999999999999998 5899999999999995 8999999999999999999999999999999999999999998876


Q ss_pred             CC
Q 033233          122 MA  123 (124)
Q Consensus       122 ~a  123 (124)
                      +.
T Consensus        80 ~~   81 (84)
T PRK05828         80 KQ   81 (84)
T ss_pred             hc
Confidence            54

>PRK07639 acyl carrier protein; Provisional

Probab=99.80  E-value=2.6e-19  Score=118.41  Aligned_cols=80  Identities=15%  Similarity=0.316  Sum_probs=75.2

Q ss_pred             CCHHHHHHHHHHHHhhcCCCCC-CCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhc--ccCccHHHHHHHHHc
Q 033233           43 LTKEEVIDRVLSVVKCFPKVDP-SQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEA--VRIDACNLAIEYIYN  119 (124)
Q Consensus        43 M~~~ei~~~l~~il~e~l~v~~-~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l--~~~~Tv~dlv~~I~~  119 (124)
                      |+++++.++|+++|++.++.+. ++++++++|.++||+||+++++|+++||++|||+||++++  .++.|++++++||.+
T Consensus         1 M~~~ei~~~i~~il~e~l~~~~~~~i~~d~~l~edL~lDSld~velv~~lE~~fgi~i~d~~~~~~~~~Tv~~l~~~i~~   80 (86)
T PRK07639          1 MRREALKNAVLKIMEEKLELKNVTHLEETMRLNEDLYIDSVMMLQLIVYIEMDVKLCVPEDEVDPKAFLTVGSLLDFMEE   80 (86)
T ss_pred             CCHHHHHHHHHHHHHHHhCCCccccCCCCCCcccccCCChHHHHHHHHHHHHHHCCccCHHHccHHHhCCHHHHHHHHHH
Confidence            7899999999999999999875 8899999999899999999999999999999999999987  689999999999988


Q ss_pred             CCC
Q 033233          120 HPM  122 (124)
Q Consensus       120 ~~~  122 (124)
                      +.+
T Consensus        81 ~~~   83 (86)
T PRK07639         81 LQP   83 (86)
T ss_pred             hhc
Confidence            764

>PRK08172 putative acyl carrier protein IacP; Validated

Probab=99.79  E-value=9.6e-20  Score=119.54  Aligned_cols=77  Identities=23%  Similarity=0.336  Sum_probs=73.9

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCCCC
Q 033233           47 EVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHPMA  123 (124)
Q Consensus        47 ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~~a  123 (124)
                      ++.+++++++++.++++++.|+++++|.++|||||+++++|+.+||++|||+|+.+++.++.|++++++|+.+++.+
T Consensus         4 ~i~~~v~~iiae~l~v~~~~i~~d~~l~~dL~~DSld~v~lv~~lEe~F~I~i~~~d~~~i~Tv~di~~~v~~~~~~   80 (82)
T PRK08172          4 DIEARVKKVITSCIAVDVDSINGQTHLVEDLYADSLDLIDIVFGLSEEFDISCNENDLPDMTTFADICRVVKKSLES   80 (82)
T ss_pred             cHHHHHHHHHHHHHCCCHHHCCCCcchhhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHCCCHHHHHHHHHHHHhc
Confidence            78999999999999999999999999988999999999999999999999999999999999999999999987653

>TIGR00517 acyl_carrier acyl carrier protein

Probab=99.75  E-value=3.1e-18  Score=110.20  Aligned_cols=75  Identities=51%  Similarity=0.792  Sum_probs=71.3

Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcC
Q 033233           46 EEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH  120 (124)
Q Consensus        46 ~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~  120 (124)
                      +++.++|++++++.++++++.++++++|.+++||||+++++|+..+|++|||+||.+++.++.|++++++||.++
T Consensus         2 ~~i~~~l~~il~~~~~~~~~~i~~~~~l~~dlglDSl~~veli~~lE~~f~i~i~~~~~~~~~tv~~l~~~i~~~   76 (77)
T TIGR00517         2 QEIFEKVKAIIKEQLNVDEDQVTPDASFVEDLGADSLDTVELVMALEEEFDIEIPDEEAEKIATVGDAVDYIEEN   76 (77)
T ss_pred             hHHHHHHHHHHHHHHCCCHHHCCCCcchhhhcCCcHHHHHHHHHHHHHHHCCCCCHHHHHHCCcHHHHHHHHHhc
Confidence            478899999999999999999999999978999999999999999999999999999999999999999999875

S (Ser) at position 37 in the seed alignment, in the motif DSLD, is the phosphopantetheine attachment site.

>COG0236 AcpP Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.71  E-value=1.9e-17  Score=107.61  Aligned_cols=78  Identities=42%  Similarity=0.608  Sum_probs=72.8

Q ss_pred             CHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           44 TKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        44 ~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      ....+...+++++.+.++++...+++++.|.++||+|||++++|++.||++|||+||++++.++.|++++++||.++.
T Consensus         2 ~~~~~~~~i~~ii~e~l~~~~~~i~~~~~~~~dlg~DSld~veLi~~lE~~f~i~i~~e~~~~~~tv~~l~~~i~~~~   79 (80)
T COG0236           2 QMEAIEERVKDIIAEQLGVDEEEITTEASFVEDLGLDSLDLVELVMALEEEFGIEIPDEELENIKTVGDLVDYIEELL   79 (80)
T ss_pred             chHHHHHHHHHHHHHHhCCchhhcCcccccccccCccHHHHHHHHHHHHHHHCCcCCHHHHHHHHhHHHHHHHHHHhc
Confidence            455789999999999999998999999999867999999999999999999999999999999999999999998764

>PRK00982 acpP acyl carrier protein; Provisional

Probab=99.68  E-value=7.3e-17  Score=103.82  Aligned_cols=75  Identities=47%  Similarity=0.745  Sum_probs=71.1

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           47 EVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        47 ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      ++.+.+++++++.++++++.++++++|.+++||||+++++++..+|++||++++.+++.++.|++++++|+.+++
T Consensus         3 ~i~~~l~~~l~~~l~~~~~~i~~d~~l~~dlglDSl~~~~li~~le~~f~i~i~~~~~~~~~ti~~l~~~l~~~~   77 (78)
T PRK00982          3 EIFEKVKKIIVEQLGVDEEEVTPEASFVDDLGADSLDTVELVMALEEEFGIEIPDEDAEKIKTVGDAVDYIEKHQ   77 (78)
T ss_pred             HHHHHHHHHHHHHHCCCHHHCCCCcchHhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHcCcHHHHHHHHHHhc
Confidence            688999999999999999999999999669999999999999999999999999999999999999999998764

>PRK09184 acyl carrier protein; Provisional

Probab=99.68  E-value=1e-16  Score=106.68  Aligned_cols=79  Identities=15%  Similarity=0.319  Sum_probs=69.6

Q ss_pred             CHHHHHHHHHHHHhhcCCC---CCCCCCCCCCc-ccccCCChhhHHHHHHHHHHHhCCccChhh---cccCccHHHHHHH
Q 033233           44 TKEEVIDRVLSVVKCFPKV---DPSQVTPDVHF-QKDLGLDSLDNVEIVMALEEEFKLEIPDKE---AVRIDACNLAIEY  116 (124)
Q Consensus        44 ~~~ei~~~l~~il~e~l~v---~~~~I~~dt~l-~~dLGlDSL~~veli~~lEe~fgI~I~~~~---l~~~~Tv~dlv~~  116 (124)
                      +.+++.++|+++|++.+++   ++++|+++++| .++||+||+++++|++.+|++|||+|++++   +..+.||+++++|
T Consensus         3 ~~~~l~~~l~~~I~e~l~~~~i~~~~I~~d~~l~~~dLglDSld~velv~~lE~~fgi~i~~~~~~~~~~~~TV~~l~~~   82 (89)
T PRK09184          3 SMTALERELAELIVEELNLEDVQPESIDADAPLYGEGLGLDSIDILEIALVISKRYGFQLRSDNPDNQRIFASLRALAAY   82 (89)
T ss_pred             hHHHHHHHHHHHHHHHHCCCCCCHHHCCCCcccccccCCCcHHHHHHHHHHHHHHHCCcCCCcchhhhhccCCHHHHHHH
Confidence            4568999999999999884   89999999997 447999999999999999999999998665   4568999999999


Q ss_pred             HHcCCC
Q 033233          117 IYNHPM  122 (124)
Q Consensus       117 I~~~~~  122 (124)
                      |.++..
T Consensus        83 I~~~~~   88 (89)
T PRK09184         83 VAAHRT   88 (89)
T ss_pred             HHHhhc
Confidence            987653

>PRK06508 acyl carrier protein; Provisional

Probab=99.67  E-value=5.2e-17  Score=108.98  Aligned_cols=77  Identities=25%  Similarity=0.383  Sum_probs=69.3

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcc-----------cCccHHHHHH
Q 033233           47 EVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAV-----------RIDACNLAIE  115 (124)
Q Consensus        47 ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~-----------~~~Tv~dlv~  115 (124)
                      .++++|++++++.++++++.|+++++|.++||||||++++|+..+|++|||+|+++++.           .+.|+++++.
T Consensus         3 ~i~ekv~~Ilae~~~vd~~~It~ds~~~edL~~DSLd~veli~~lE~eFgI~i~~ee~~~~~n~~~~~~~~~~~l~~~~~   82 (93)
T PRK06508          3 STFDKVADIIAETSDIPRDTITPESHTIDDLGIDSLDFLDIVFAIDKAFGIKLPLEQWTQEVNEGKVPTEEYFVLKNLCA   82 (93)
T ss_pred             HHHHHHHHHHHHHhCCCHHHCCCCCcchhccCCCHHHHHHHHHHHHHHHCCccCHHHHHHhhcccccccchHHHHHHHHH
Confidence            68899999999999999999999999989999999999999999999999999999964           4558888888


Q ss_pred             HHHcCCCC
Q 033233          116 YIYNHPMA  123 (124)
Q Consensus       116 ~I~~~~~a  123 (124)
                      +|.+..++
T Consensus        83 ~i~~~~~~   90 (93)
T PRK06508         83 KIDELVAA   90 (93)
T ss_pred             HHHHHHHh
Confidence            88765543

>PRK05087 D-alanine--poly(phosphoribitol) ligase subunit 2; Validated

Probab=99.57  E-value=7.1e-15  Score=95.64  Aligned_cols=74  Identities=24%  Similarity=0.323  Sum_probs=66.9

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhccc--CccHHHHHHHHHcC
Q 033233           47 EVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVR--IDACNLAIEYIYNH  120 (124)
Q Consensus        47 ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~--~~Tv~dlv~~I~~~  120 (124)
                      ++.++|+++|.+.++.+...++++++|.+++++||+++++|++.+|++|||+||++++..  |.|++++++||.+.
T Consensus         2 ~i~~~I~~iL~~~~~~~~~~~~~d~~l~~~g~lDSl~~veli~~lE~~fgi~i~~~e~~~~~f~Tv~~i~~~v~~l   77 (78)
T PRK05087          2 DFKEQVLDILEELTGEDIVSENMDEDLFEEGILDSMGTVELLVELENRFDIEVPVSEFDRDDWNTPNKIIAKVEEL   77 (78)
T ss_pred             cHHHHHHHHHHHHhCCChhccCCccchhhccCcchHHHHHHHHHHHHHhCCccChHhcCHHhhcCHHHHHHHHHHc
Confidence            467889999999888887789999999877779999999999999999999999999865  99999999999865

>PRK07081 acyl carrier protein; Provisional

Probab=99.57  E-value=3.3e-15  Score=98.06  Aligned_cols=73  Identities=21%  Similarity=0.348  Sum_probs=64.6

Q ss_pred             HHHHHHHHhhc--CCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcc--cCccHHHHHHHHHcCCC
Q 033233           49 IDRVLSVVKCF--PKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAV--RIDACNLAIEYIYNHPM  122 (124)
Q Consensus        49 ~~~l~~il~e~--l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~--~~~Tv~dlv~~I~~~~~  122 (124)
                      .++|++++.+.  ++++++.++++++|. ++||||+++++|+..||++|||+||++++.  ++.|+++++++|.+.++
T Consensus         2 ~~~i~~ii~~~~~~~~~~~~i~~d~~l~-dlGlDSl~~v~li~~lE~~f~I~i~~~~~~~~~~~tv~~l~~~V~~~~~   78 (83)
T PRK07081          2 KNTIRTILKKVAKLEVPIDSIADDADLY-EAGLSSLATVQLMLAIEDAFDIEIPDEMLNRKLFASIDALAGAVTQLQD   78 (83)
T ss_pred             hHHHHHHHHHHHcCCCCHHhcCCCCCHh-hcCCCHHHHHHHHHHHHHHhCCcCCHHHcCHHHhccHHHHHHHHHHHHh
Confidence            46788888886  556778999999996 899999999999999999999999999985  59999999999987654

>PF00550 PP-binding: Phosphopantetheine attachment site; InterPro: IPR006163 Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups []

Probab=99.56  E-value=1.1e-14  Score=90.31  Aligned_cols=67  Identities=39%  Similarity=0.654  Sum_probs=63.4

Q ss_pred             HHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHH
Q 033233           50 DRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYI  117 (124)
Q Consensus        50 ~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I  117 (124)
                      ++|++++++.++++.++++++++|. ++|+||+.+++++..++++||++++..++.++.|++++++||
T Consensus         1 e~l~~~~~~~l~~~~~~i~~~~~~~-~lG~DSl~~~~l~~~l~~~~g~~i~~~~~~~~~ti~~l~~~i   67 (67)
T PF00550_consen    1 EQLREIIAEVLGVDPEEIDPDTDFF-DLGLDSLDAIELVSELEEEFGIKIPPSDLFEHPTIRDLAEYI   67 (67)
T ss_dssp             HHHHHHHHHHHTSSGGCTSTTSBTT-TTTSSHHHHHHHHHHHHHHHTSSTTHHHHCTSSSHHHHHHHH
T ss_pred             CHHHHHHHHHHCcCHhhCCCCCCHH-HhCCchHHHHHHHHHHHHHHcCCCCHHHHHcCCCHHHHHhHC
Confidence            4688899999999999999999997 899999999999999999999999999999999999999986

The amino-terminal region of the ACP proteins is well defined and consists of alpha four helices arranged in a right-handed bundle held together by interhelical hydrophobic interactions. The Asp-Ser-Leu (DSL)motif is conserved in all of the ACP sequences, and the 4'-PP prosthetic group is covalently linked via a phosphodiester bond to the serine residue. The DSL sequence is present at the amino terminus of helix II, a domain of the protein referred to as the recognition helix and which is responsible for the interaction of ACPs with the enzymes of type II fatty acid synthesis [].; GO: 0048037 cofactor binding; PDB: 3EJB_E 3EJE_G 1L0I_A 2FHS_C 3EJD_E 2FAE_B 2FAD_B 2FAC_B 2K94_A 1ACP_A ....

>TIGR01688 dltC D-alanine--poly(phosphoribitol) ligase, subunit 2

Probab=99.28  E-value=6.7e-12  Score=80.73  Aligned_cols=69  Identities=22%  Similarity=0.423  Sum_probs=59.2

Q ss_pred             HHHHHHHhhcCCCCCCCCCCCCCcccccCC-ChhhHHHHHHHHHHHhCCccChhhc--ccCccHHHHHHHHHc
Q 033233           50 DRVLSVVKCFPKVDPSQVTPDVHFQKDLGL-DSLDNVEIVMALEEEFKLEIPDKEA--VRIDACNLAIEYIYN  119 (124)
Q Consensus        50 ~~l~~il~e~l~v~~~~I~~dt~l~~dLGl-DSL~~veli~~lEe~fgI~I~~~~l--~~~~Tv~dlv~~I~~  119 (124)
                      ++|+++|.++.|.+.....++++|. +.|+ ||++.++++..||++|||+||.+++  .+|.|++.++++|.+
T Consensus         2 e~i~eIL~~i~~~~~~~~~~d~~L~-~~GllDS~~~v~Li~~lE~ef~I~i~~~el~~enf~S~~~i~~~v~~   73 (73)
T TIGR01688         2 NGVLDILAEVTGSDDVKENPDLELF-EEGLLDSFGTVQLLLEIQNQFDIDVPISEFDRDEWDTPNKIVAKLEE   73 (73)
T ss_pred             hHHHHHHHHHhcCcccccCccHHHH-HccchhHHHHHHHHHHHHHHhCCccCHHHcCHHHhcCHHHHHHHHhC
Confidence            5688888888766554568899998 6665 9999999999999999999999997  679999999999863

This protein is part of the teichoic acid operon in gram-positive organisms. Gram positive organisms incorporate teichoic acid in their cell walls, and in the fatty acid residues of the glycolipid component of the outer layer of the cytoplasmic membrane. This gene, dltC, encodes the alanyl carrier protein.

>PF14573 PP-binding_2: Acyl-carrier; PDB: 3CE7_A

Probab=99.17  E-value=1.4e-10  Score=76.75  Aligned_cols=76  Identities=28%  Similarity=0.464  Sum_probs=52.0

Q ss_pred             CHHHHHHHHHHHHhhcCCCCCCCCCCCCCc-----ccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHH
Q 033233           44 TKEEVIDRVLSVVKCFPKVDPSQVTPDVHF-----QKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIY  118 (124)
Q Consensus        44 ~~~ei~~~l~~il~e~l~v~~~~I~~dt~l-----~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~  118 (124)
                      +-+.+.+++..++.+++.- ..++++.+.+     .+++.||||+.++++..+|++|+|.||++...++.|++++++|+.
T Consensus         7 d~nav~~~i~g~~kkyl~~-~~~it~~skL~e~rt~e~r~wD~LDtVefvldVEe~F~V~IpDE~aDN~~tvqeIadfvv   85 (96)
T PF14573_consen    7 DINAVTEYILGMLKKYLSE-GEEITYTSKLEESRTKEDRAWDSLDTVEFVLDVEEEFDVTIPDETADNIKTVQEIADFVV   85 (96)
T ss_dssp             -HHHHHHHHHHHHHTTB-T-T----TTS-GGGSBBTTSSB--HHHHHHHHHHHHHHHT----HHHHTT--SHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHcCC-CCccChhhhhHHhccccccccchhhhHHHHHhHHHHcCcccCccccchhhHHHHHHHHHH
Confidence            4567888888888887643 2345555554     578999999999999999999999999999999999999999997


Q ss_pred             cC
Q 033233          119 NH  120 (124)
Q Consensus       119 ~~  120 (124)
                      +.
T Consensus        86 ~~   87 (96)
T PF14573_consen   86 QE   87 (96)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>smart00823 PKS_PP Phosphopantetheine attachment site

Probab=98.79  E-value=3.4e-08  Score=61.56  Aligned_cols=74  Identities=27%  Similarity=0.319  Sum_probs=64.4

Q ss_pred             HHHHHHHHHHHhhcCCCCCCC-CCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcC
Q 033233           46 EEVIDRVLSVVKCFPKVDPSQ-VTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH  120 (124)
Q Consensus        46 ~ei~~~l~~il~e~l~v~~~~-I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~  120 (124)
                      ..+...+...+...++..... ++.+.+|. ++|+||+..+++...+++.||++++..++....|+..+++++.++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~dSl~~~~~~~~l~~~~~~~i~~~~~~~~~t~~~l~~~i~~~   85 (86)
T smart00823       11 RLLLDLVREQVAAVLGHAAAEAIDPDRPFR-DLGLDSLTAVELRNRLEAATGLRLPATLVFDHPTPAALAEHLAAE   85 (86)
T ss_pred             HHHHHHHHHHHHHHHCCCccccCCCCCCHH-HcCchHHHHHHHHHHHHHHHCCCCChHHHHcCCCHHHHHHHHHHh
Confidence            456677888888887776655 48899996 899999999999999999999999999998999999999998764

Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups PUBMED:5321311.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.77  E-value=1.8e-08  Score=97.25  Aligned_cols=79  Identities=16%  Similarity=0.277  Sum_probs=74.8

Q ss_pred             CCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhC--CccChhhcccCccHHHHHHHHHcC
Q 033233           43 LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFK--LEIPDKEAVRIDACNLAIEYIYNH  120 (124)
Q Consensus        43 M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fg--I~I~~~~l~~~~Tv~dlv~~I~~~  120 (124)
                      .+..++.+.+++++++.+|++.+.++++.+|.+|||+||++.+|++..++++|+  .+++++++.++.|++++++|+..+
T Consensus      1303 ~~~~~v~~~vl~vvae~tgyp~e~L~~d~~le~DLGiDSI~~vEil~~le~~f~~~~~i~~e~l~~l~Tl~div~~i~~~ 1382 (2582)
T TIGR02813      1303 TDLIQIQNVMLEVVADKTGYPTEMLELEMDMEADLGIDSIKRVEILGTVQDTLPDLPELSPEDLAECRTLGEIVSYMQSK 1382 (2582)
T ss_pred             ccHHHHHHHHHHHHHHHhCCCHHHcCcccCchhhcCCCHHHHHHHHHHHHHhcCCcCCCChhHhhhcccHHHHHHHHhhc
Confidence            467899999999999999999999999999999999999999999999999999  899999999999999999999765


Q ss_pred             C
Q 033233          121 P  121 (124)
Q Consensus       121 ~  121 (124)
                      .
T Consensus      1383 ~ 1383 (2582)
T TIGR02813      1383 V 1383 (2582)
T ss_pred             c
Confidence            4

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK06060 acyl-CoA synthetase; Validated

Probab=98.41  E-value=5.7e-07  Score=77.30  Aligned_cols=75  Identities=21%  Similarity=0.259  Sum_probs=67.3

Q ss_pred             HHHHHHHHHHHhhcCCCC-CCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           46 EEVIDRVLSVVKCFPKVD-PSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        46 ~ei~~~l~~il~e~l~v~-~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      ..+.+.|+..++++++.+ ++.++.+.+|. ++|+|||..+++...|++.||++++...+.+..|+.+++++|.+.+
T Consensus       544 ~~~~~~v~~~~a~vl~~~~~~~i~~~~~f~-~lG~dSl~av~l~~~l~~~~g~~l~~~~~~~~pt~~~la~~l~~~~  619 (705)
T PRK06060        544 RLVVDAVCAEAAKMLGEPDPWSVDQDLAFS-ELGFDSQMTVTLCKRLAAVTGLRLPETVGWDYGSISGLAQYLEAEL  619 (705)
T ss_pred             HHHHHHHHHHHHHHhCCCChhhCCCCCChh-hcCchHHHHHHHHHHHHHHhCCCCCceeeecCCCHHHHHHHHHHHh
Confidence            345677888888899975 56799999997 9999999999999999999999999999999999999999997654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.28  E-value=2.3e-06  Score=83.15  Aligned_cols=79  Identities=16%  Similarity=0.309  Sum_probs=73.1

Q ss_pred             CCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhC--CccChhhcccCccHHHHHHHHHcC
Q 033233           43 LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFK--LEIPDKEAVRIDACNLAIEYIYNH  120 (124)
Q Consensus        43 M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fg--I~I~~~~l~~~~Tv~dlv~~I~~~  120 (124)
                      .+..++.+.+.+++++..|++.+.++++.++..|||+||+..+|++..++++|+  .+++++++.+++|++++++|+...
T Consensus      1207 ~~~~~~~~~~l~vvae~tgyp~e~L~ld~d~eaDLgIDSIkrveil~~l~~~~~~~~e~~pe~l~~~rTl~~iv~~~~~~ 1286 (2582)
T TIGR02813      1207 VNDSAIQQVMMEVVAEKTGYPTEMLELEMDMEADLGIDSIKRVEILGSVQEIINDLPELNPEDLAELRTLGEIVNYMQSK 1286 (2582)
T ss_pred             cchhHHHHHHHHHHHhhccCChHhcccccccccccCcchhhhHHhhhhhhhhccCCCCCChhhhcccccHHHHHHhhccc
Confidence            456789999999999999999999999999999999999999999999999998  788999999999999999999654


Q ss_pred             C
Q 033233          121 P  121 (124)
Q Consensus       121 ~  121 (124)
                      .
T Consensus      1287 ~ 1287 (2582)
T TIGR02813      1287 V 1287 (2582)
T ss_pred             c
Confidence            4

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.24  E-value=2.6e-06  Score=78.10  Aligned_cols=75  Identities=16%  Similarity=0.194  Sum_probs=68.4

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcC
Q 033233           45 KEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH  120 (124)
Q Consensus        45 ~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~  120 (124)
                      ..++.+.+.++++++++.+.+.++.+.+|+ ++|.|||.++++...|++.||+.++..++.+..|+.+++++|.+.
T Consensus       846 ~~~~~~~l~~~~~~vl~~~~~~i~~~~~ff-~lGgdSL~a~~l~~~l~~~~~~~l~~~~i~~~~ti~~la~~l~~~  920 (1389)
T TIGR03443       846 FTETEREIRDLWLELLPNRPATISPDDSFF-DLGGHSILATRMIFELRKKLNVELPLGLIFKSPTIKGFAKEVDRL  920 (1389)
T ss_pred             CCHHHHHHHHHHHHHhCCCccccCcCcchh-hcCccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHhh
Confidence            346778899999999998877899999998 999999999999999999999999999999999999999998643

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK10252 entF enterobactin synthase subunit F; Provisional

Probab=98.11  E-value=8.6e-06  Score=73.88  Aligned_cols=73  Identities=15%  Similarity=0.184  Sum_probs=67.1

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcC
Q 033233           45 KEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH  120 (124)
Q Consensus        45 ~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~  120 (124)
                      ..++.+.+.++++++++++  .++.+.+|+ ++|.|||.++++...|++.||+.++..++....|+++++++|.+.
T Consensus       976 ~~~~e~~l~~~~~~~l~~~--~~~~~~~ff-~lGg~Sl~a~~l~~~l~~~~~~~l~~~~~~~~pti~~la~~l~~~ 1048 (1296)
T PRK10252        976 KTGTETIIAAAFSSLLGCD--VVDADADFF-ALGGHSLLAMKLAAQLSRQFARQVTPGQVMVASTVAKLATLLDAE 1048 (1296)
T ss_pred             CCHHHHHHHHHHHHHhCCC--CCCCCcCHH-HcCCChHHHHHHHHHHHHHhCCCCCHHHHhcCCCHHHHHHHHhcc
Confidence            3467788999999999986  689999997 999999999999999999999999999999999999999999765

>COG3433 Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=97.93  E-value=1.9e-05  Score=50.52  Aligned_cols=69  Identities=9%  Similarity=0.054  Sum_probs=57.8

Q ss_pred             HHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCCC
Q 033233           52 VLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHPM  122 (124)
Q Consensus        52 l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~~  122 (124)
                      +.+.+.+.++.++++++++.++. +.|+||+-+|.++....+ -|..|++.++....|++..-+.+..+..
T Consensus         3 Lr~~~~~Ll~e~~~~l~dqeNLi-~~GLDSiR~M~L~~~wR~-~G~~i~F~~La~~PTl~aW~qLl~~~~~   71 (74)
T COG3433           3 LREQIAELLGESVEELDDQENLI-DYGLDSIRMMALLERWRK-RGADIDFAQLAANPTLAAWWQLLSTRSK   71 (74)
T ss_pred             HHHHHHHHHcCChhhcCchhhHH-HhchhHHHHHHHHHHHHH-cCCcccHHHHHhCccHHHHHHHHHhccc
Confidence            34555556666888999999997 999999999999998865 4888999999999999999998876654

>PRK12467 peptide synthase; Provisional

Probab=97.92  E-value=2.5e-05  Score=78.40  Aligned_cols=72  Identities=18%  Similarity=0.218  Sum_probs=66.5

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHc
Q 033233           45 KEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYN  119 (124)
Q Consensus        45 ~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~  119 (124)
                      ..++.+.+.+++++++|++  .+..+.+|+ ++|.|||.+++++..+++.||++++..++.+..|++++++++..
T Consensus      3603 ~~~~e~~l~~i~~~vL~~~--~i~~~d~Ff-~lGgdSl~a~~l~~~l~~~~g~~l~~~~lf~~pti~~la~~~~~ 3674 (3956)
T PRK12467       3603 RSEVEQQLAAIWADVLGVE--QVGVTDNFF-ELGGDSLLALQVLSRIRQSLGLKLSLRDLMSAPTIAELAGYSPL 3674 (3956)
T ss_pred             CCHHHHHHHHHHHHHhCCC--CCCCCcchh-cccchHHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHhh
Confidence            4577889999999999985  589999998 99999999999999999999999999999999999999999965

>PRK12467 peptide synthase; Provisional

Probab=97.86  E-value=3.4e-05  Score=77.39  Aligned_cols=73  Identities=15%  Similarity=0.211  Sum_probs=66.6

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcC
Q 033233           45 KEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH  120 (124)
Q Consensus        45 ~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~  120 (124)
                      ..++.+.+.+++++++|++  .+..+.+|+ ++|.|||.+++++..++++||+.++..++.+..|++++++++...
T Consensus      1028 ~~~~e~~l~~i~~~vL~~~--~i~~~d~Ff-~lGgdSl~a~~l~~~~~~~~g~~l~~~~lf~~~t~~~la~~~~~~ 1100 (3956)
T PRK12467       1028 QTELEKRLAAIWADVLKVE--RVGLTDNFF-ELGGHSLLATQVISRVRQRLGIQVPLRTLFEHQTLAGFAQAVAAQ 1100 (3956)
T ss_pred             CCHHHHHHHHHHHHHhCCC--CCCCCCCch-hccCccHHHHHHHHHHHHHhCCCcchHHhhccchHHHHHHHhhhh
Confidence            4467888999999999874  689999998 999999999999999999999999999999999999999998653

>PRK12316 peptide synthase; Provisional

Probab=97.85  E-value=4.3e-05  Score=78.03  Aligned_cols=73  Identities=21%  Similarity=0.283  Sum_probs=66.6

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcC
Q 033233           45 KEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH  120 (124)
Q Consensus        45 ~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~  120 (124)
                      ..++...+.++++++++++  .|..+.+|+ ++|.|||.++.|+..|+++||++++..++....|+++|++++...
T Consensus      5070 ~~~~e~~l~~i~~~vL~~~--~i~~~~~Ff-~lGgdSl~a~~l~~~l~~~~g~~l~~~~lf~~pti~~la~~~~~~ 5142 (5163)
T PRK12316       5070 RSELEQQVAAIWAEVLQLE--RVGLDDNFF-ELGGHSLLAIQVTSRIQLELGLELPLRELFQTPTLAAFVELAAAA 5142 (5163)
T ss_pred             CcHHHHHHHHHHHHHhCCC--CCCCCCChh-hccchHHHHHHHHHHHHHHcCCCCCHHHHHcCCCHHHHHHHHHhc
Confidence            4567889999999999874  588999997 999999999999999999999999999999999999999999654

>PRK05691 peptide synthase; Validated

Probab=97.80  E-value=6e-05  Score=76.11  Aligned_cols=73  Identities=19%  Similarity=0.269  Sum_probs=67.3

Q ss_pred             CHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHc
Q 033233           44 TKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYN  119 (124)
Q Consensus        44 ~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~  119 (124)
                      .+.++...|.++++++++++  .+..+.+|+ ++|.|||.++.++..+++.||++++..++.+..|+.+++++|..
T Consensus      4238 p~~~~e~~l~~iw~~vL~~~--~i~~~d~Ff-~lGg~Sl~a~~l~~~~~~~~~~~~~~~~~f~~~t~~~la~~~~~ 4310 (4334)
T PRK05691       4238 PRNELEQTLATIWADVLKVE--RVGVHDNFF-ELGGHSLLATQIASRVQKALQRNVPLRAMFECSTVEELAEYIEG 4310 (4334)
T ss_pred             CCCHHHHHHHHHHHHHhCCC--cCCCCCchh-hcCCcHHHHHHHHHHHHHHhCCCccHHHHhcCCCHHHHHHHHhh
Confidence            35688899999999999974  589999998 99999999999999999999999999999999999999999964

>PRK05691 peptide synthase; Validated

Probab=97.76  E-value=6.1e-05  Score=76.05  Aligned_cols=76  Identities=20%  Similarity=0.251  Sum_probs=68.3

Q ss_pred             CCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcC
Q 033233           42 HLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH  120 (124)
Q Consensus        42 ~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~  120 (124)
                      .....++.+.+.++++++++++  .+..+.+|+ ++|.|||.+++++..++++||+.++..++.+..|++++++++..+
T Consensus       581 ~~~~~~~e~~l~~~~~~vL~~~--~i~~~~~ff-~lGgdSL~a~~l~~~l~~~~g~~l~v~~i~~~~ti~~la~~l~~~  656 (4334)
T PRK05691        581 AASGDELQARIAAIWCEQLKVE--QVAADDHFF-LLGGNSIAATQVVARLRDELGIDLNLRQLFEAPTLAAFSAAVARQ  656 (4334)
T ss_pred             cCCcchHHHHHHHHHHHHhCCC--CCCcCCchh-hcccchHHHHHHHHHHHHHhCCcCchhhhhcccchHHHHHHHHHh
Confidence            3445678889999999999974  689999997 999999999999999999999999999999999999999998654

>PRK12316 peptide synthase; Provisional

Probab=97.70  E-value=7.5e-05  Score=76.38  Aligned_cols=73  Identities=23%  Similarity=0.288  Sum_probs=65.9

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcC
Q 033233           45 KEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH  120 (124)
Q Consensus        45 ~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~  120 (124)
                      ..++.+.+.++++++++++  .+..+.+|+ +||.|||.+++++..++++||+.++..++.+..|+++++..+...
T Consensus      2514 ~~~~e~~l~~iw~~vL~~~--~i~~~d~Ff-~lGgdSl~a~~l~~~~~~~~g~~l~~~~~f~~~ti~~la~~l~~~ 2586 (5163)
T PRK12316       2514 QEGLEQRLAAIWQAVLKVE--QVGLDDHFF-ELGGHSLLATQVVSRVRQDLGLEVPLRILFERPTLAAFAASLESG 2586 (5163)
T ss_pred             CCHHHHHHHHHHHHHhCCC--ccCCCCchh-hhcchHHHHHHHHHHHHHHhCCCcCHHHHhhCccHHHHhhhhhhh
Confidence            4567788999999999984  588999997 999999999999999999999999999999999999999888643

>PF07377 DUF1493: Protein of unknown function (DUF1493); InterPro: IPR010862 This family consists of several bacterial proteins of around 115 residues in length

Probab=97.54  E-value=0.00021  Score=49.02  Aligned_cols=59  Identities=24%  Similarity=0.455  Sum_probs=52.2

Q ss_pred             HHHHHHHHHHHhhcCCC----CCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhc
Q 033233           46 EEVIDRVLSVVKCFPKV----DPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEA  104 (124)
Q Consensus        46 ~ei~~~l~~il~e~l~v----~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l  104 (124)
                      +++.++|.+.+.+..|.    ....+++++++..+||++--++.+++....++|+|++..=++
T Consensus         2 ~~i~~~I~~fi~~~~~~~~~~~~~~it~dt~L~~DL~~~~dda~elm~~f~~~F~Vd~~~f~~   64 (111)
T PF07377_consen    2 DDIEQEIIEFIREENGPYLFFKKKPITPDTDLQEDLGLDGDDAEELMEDFFERFNVDLSDFDF   64 (111)
T ss_pred             chHHHHHHHHHHHHcCcccccCcccCCCCCcHHHhcCCCHHHHHHHHHHHHHHhCCCcCccCH
Confidence            57888999999998886    578899999998899999999999999999999999765443

Members of this family are largely found in Salmonella and Yersinia species and several have been described as being putative cytoplasmic proteins. The function of this family is unknown.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=96.62  E-value=0.00095  Score=61.81  Aligned_cols=55  Identities=35%  Similarity=0.504  Sum_probs=47.7

Q ss_pred             HHHHHHhhcCCC-CCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhccc
Q 033233           51 RVLSVVKCFPKV-DPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVR  106 (124)
Q Consensus        51 ~l~~il~e~l~v-~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~  106 (124)
                      .+.+.|+.++|+ |...++++++|. |||+|||+-+|+-..||++|++-+...++..
T Consensus      2008 dLiatiA~IlGlrD~~~vn~~asLa-DLGlDSLMsvEikQtLER~~dlVLS~qEiRq 2063 (2376)
T KOG1202|consen 2008 DLIATIAHILGLRDLKAVNDDASLA-DLGLDSLMSVEIKQTLEREFDLVLSAQEIRQ 2063 (2376)
T ss_pred             cHHHHHHHHhcchhHhhccCCCchh-hccchhhhhHHHHHHHhhhhceeeeHHHHHH
Confidence            366677777886 577899999996 9999999999999999999999999888754

>PF10501 Ribosomal_L50: Ribosomal subunit 39S; InterPro: IPR018305 This entry represents the L50 protein from the mitochondrial 39S ribosomal subunit

Probab=95.85  E-value=0.061  Score=36.83  Aligned_cols=75  Identities=12%  Similarity=0.129  Sum_probs=57.5

Q ss_pred             CHHHHHHHHHHHHhhcCCCCCCCC-CCCCCcccccCCCh-hhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHc
Q 033233           44 TKEEVIDRVLSVVKCFPKVDPSQV-TPDVHFQKDLGLDS-LDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYN  119 (124)
Q Consensus        44 ~~~ei~~~l~~il~e~l~v~~~~I-~~dt~l~~dLGlDS-L~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~  119 (124)
                      ..+++.+.+.+...+.++.+.... ..+..+. ++.++. -.-..|+.++.+.+|..||+..+..+.|++++++|+..
T Consensus         5 ~~e~l~~~i~e~~~e~~~~~~~~~~~~~~~~~-~~~l~D~~~KF~~lKrl~~~tGh~ipD~~L~~~~T~~dl~~~~~~   81 (112)
T PF10501_consen    5 PPEDLEEIIEESAKEVLGAEGFGSQSWNNDWL-DISLEDLQLKFAFLKRLQQLTGHRIPDSKLHSIHTVGDLLNFYEK   81 (112)
T ss_pred             CHHHHHHHHHHHHHHHhcccccccccCCcccc-ccccCCHHHHHHHHHHHHHHHCCCCCcHHHHhcCCHHHHHHHHHH
Confidence            467888888888888888654333 2344442 444544 35678999999999999999999999999999999943

L50 appears to be a secondary RNA-binding protein []. The 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units []. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [].; GO: 0005739 mitochondrion

>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family

Probab=94.78  E-value=0.12  Score=42.12  Aligned_cols=79  Identities=23%  Similarity=0.296  Sum_probs=59.2

Q ss_pred             CCHHHHHHHHHHHHhhcCCCC---------CCCCCCCCCc-ccccCCChhhHHHHHHHHHHHhCCc-cChhh-cccCccH
Q 033233           43 LTKEEVIDRVLSVVKCFPKVD---------PSQVTPDVHF-QKDLGLDSLDNVEIVMALEEEFKLE-IPDKE-AVRIDAC  110 (124)
Q Consensus        43 M~~~ei~~~l~~il~e~l~v~---------~~~I~~dt~l-~~dLGlDSL~~veli~~lEe~fgI~-I~~~~-l~~~~Tv  110 (124)
                      .+.+.|...+..+|...+.--         ...+..|+.+ .+.+|+|||..++|+.++-+-|++. -..++ +....++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (386)
T TIGR02372         3 LDAEAVGRLLVSLIAAEQQEGRVQHHQMPEARLLTADLRIDEETLGLDSLLRLSLVTAVAGFFHLSDTGTEDYLLVRRRI   82 (386)
T ss_pred             ccHHHHHHHHHHHHHHHHHhcCCCcccCchhhhcccccccccccccccHHHHHHHHHHHHHHhcccccchhhhhhhhccH
Confidence            367788888888887764422         2237777877 5689999999999999999999994 23334 3456899


Q ss_pred             HHHHHHHHcCC
Q 033233          111 NLAIEYIYNHP  121 (124)
Q Consensus       111 ~dlv~~I~~~~  121 (124)
                      ++.++.|.+..
T Consensus        83 ~~~~~~~~~~~   93 (386)
T TIGR02372        83 GEWVDLIAHHS   93 (386)
T ss_pred             HHHHHHHHhcC
Confidence            99999987553

Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.

>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]

Probab=86.14  E-value=0.77  Score=42.46  Aligned_cols=54  Identities=24%  Similarity=0.178  Sum_probs=47.8

Q ss_pred             CCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHc
Q 033233           65 SQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYN  119 (124)
Q Consensus        65 ~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~  119 (124)
                      ..++++++|+ ++|.||+.++-++..+...+.++.|..-.....|+..+..-+..
T Consensus       614 ~~~s~d~~fF-~lGgdSi~av~~~~~lr~~~~v~~~~~l~~~l~ti~~~~~~~~~  667 (1032)
T KOG1178|consen  614 AIVSPDSSFF-QLGGDSISAVRLSGLLRKKGYVEGPLGLIFKLLTIVNLESGIIR  667 (1032)
T ss_pred             cccCCCcchh-hhcchhHHHHHHHHhhhhhheeccccccccchhhHHHHHHHHhh
Confidence            4678999998 99999999999999999999999999998888888888765543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	124
2dnw_A	99	Solution Structure Of Rsgi Ruh-059, An Acp Domain O		1e-15
1x3o_A	80	Crystal Structure Of The Acyl Carrier Protein From		5e-13
2k92_A	77	Structural Modification Of Acyl Carrier Protein By		8e-13
3ejb_A	97	Crystal Structure Of P450bioi In Complex With Tetra		9e-13
1l0h_A	78	Crystal Structure Of Butyryl-Acp From E.Coli Length		1e-12
1t8k_A	77	Crystal Structure Of Apo Acyl Carrier Protein From		1e-12
1l0i_A	78	Crystal Structure Of Butyryl-Acp I62m Mutant Length		2e-12
2l0q_A	80	Nmr Solution Structure Of Vibrio Harveyi Acyl Carri		6e-12
4dxe_H	101	2.52 Angstrom Resolution Crystal Structure Of The A		8e-11
2qnw_A	82	Toxoplasma Gondii Apicoplast-Targeted Acyl Carrier		2e-10
2ehs_A	77	Crystal Structure Of Acyl Carrier Protein From Aqui		3e-10
2x2b_A	78	Crystal Structure Of Malonyl-Acp (Acyl Carrier Prot		1e-09
1hy8_A	76	Solution Structure Of B. Subtilis Acyl Carrier Prot		1e-09
2l3v_A	79	Nmr Structure Of Acyl Carrier Protein From Brucella		4e-09
1f80_D	81	Holo-(Acyl Carrier Protein) Synthase In Complex Wit		4e-09
3gzl_A	81	Crystal Structure Of Holo Pfacp Disulfide-Linked Di		4e-09
2fq0_A	79	Solution Structure Of Major Conformation Of Holo-Ac		5e-09
2lol_A	81	Nmr Structure Of An Acyl-Carrier Protein From Ricke		9e-08
2l4b_A	88	Solution Structure Of A Putative Acyl Carrier Prote		3e-06
2cnr_A	82	Structural Studies On The Interaction Of Scfas Acp		4e-06
2koo_A	81	Nmr Solution Structures Of Hexanoyl-Acp From The St		5e-06
2ava_A	82	Solution Structure Of Stearoyl-Acyl Carrier Protein		8e-06
2xz0_D	82	The Structure Of The 2:1 (Partially Occupied) Compl		4e-05
1klp_A	115	The Solution Structure Of Acyl Carrier Protein From		1e-04
3lmo_A	101	Crystal Structure Of Specialized Acyl Carrier Prote		6e-04

>pdb|2DNW|A Chain A, Solution Structure Of Rsgi Ruh-059, An Acp Domain Of Acyl Carrier Protein, Mitochondrial [precursor] From Human Cdna Length = 99

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 54/75 (72%)
Query: 43  LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
           LT E + DRVL V+K + K+DP +++ + HF KDLGLDSLD VEI+MA+E+EF  EIPD 
Sbjct: 11  LTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDI 70
Query: 103 EAVRIDACNLAIEYI 117
           +A ++      ++YI
Sbjct: 71  DAEKLMCPQEIVDYI 85

>pdb|1X3O|A Chain A, Crystal Structure Of The Acyl Carrier Protein From Thermus Thermophilus Hb8 Length = 80

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 53/75 (70%)
Query: 43  LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
           +T++E+ ++V +V+    +V+P +VT +  F +DLG DSLD VE++M LE+EF LEI D+
Sbjct: 1   MTEQEIFEKVKAVIADKLQVEPEKVTLEARFIEDLGADSLDTVELIMGLEDEFGLEISDE 60
Query: 103 EAVRIDACNLAIEYI 117
           EA +I     A+EYI
Sbjct: 61  EAEKIRTVKDAVEYI 75

>pdb|2K92|A Chain A, Structural Modification Of Acyl Carrier Protein By Butyryl Group Length = 77

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 45/71 (63%)
Query: 50  DRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDA 109
           +RV  ++     V   +VT +  F +DLG DSLD VE+VMALEEEF  EIPD+EA +I  
Sbjct: 5   ERVKKIIGQQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITT 64
Query: 110 CNLAIEYIYNH 120
              AI+YI  H
Sbjct: 65  VQAAIDYINGH 75

>pdb|3EJB|A Chain A, Crystal Structure Of P450bioi In Complex With Tetradecanoic Acid Ligated Acyl Carrier Protein Length = 97

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 45/71 (63%)
Query: 50  DRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDA 109
           +RV  ++     V   +VT +  F +DLG DSLD VE+VMALEEEF  EIPD+EA +I  
Sbjct: 25  ERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITT 84
Query: 110 CNLAIEYIYNH 120
              AI+YI  H
Sbjct: 85  VQAAIDYINGH 95

>pdb|1L0H|A Chain A, Crystal Structure Of Butyryl-Acp From E.Coli Length = 78

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 45/71 (63%)
Query: 50  DRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDA 109
           +RV  ++     V   +VT +  F +DLG DSLD VE+VMALEEEF  EIPD+EA +I  
Sbjct: 6   ERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITT 65
Query: 110 CNLAIEYIYNH 120
              AI+YI  H
Sbjct: 66  VQAAIDYINGH 76

>pdb|1T8K|A Chain A, Crystal Structure Of Apo Acyl Carrier Protein From E. Coli Length = 77

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 45/71 (63%)
Query: 50  DRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDA 109
           +RV  ++     V   +VT +  F +DLG DSLD VE+VMALEEEF  EIPD+EA +I  
Sbjct: 5   ERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITT 64
Query: 110 CNLAIEYIYNH 120
              AI+YI  H
Sbjct: 65  VQAAIDYINGH 75

>pdb|1L0I|A Chain A, Crystal Structure Of Butyryl-Acp I62m Mutant Length = 78

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 45/71 (63%)
Query: 50  DRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDA 109
           +RV  ++     V   +VT +  F +DLG DSLD VE+VMALEEEF  EIPD+EA ++  
Sbjct: 6   ERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKMTT 65
Query: 110 CNLAIEYIYNH 120
              AI+YI  H
Sbjct: 66  VQAAIDYINGH 76

>pdb|2L0Q|A Chain A, Nmr Solution Structure Of Vibrio Harveyi Acyl Carrier Protein (Acp) Length = 80

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 46/71 (64%)
Query: 50  DRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDA 109
           +RV  ++     VD ++V  +  F  DLG DSLD VE+VMALEEEF  EIPD+EA +I  
Sbjct: 9   ERVKKIIVEQLGVDEAEVKNEASFVDDLGADSLDTVELVMALEEEFDTEIPDEEAEKITT 68
Query: 110 CNLAIEYIYNH 120
              AI+Y+ +H
Sbjct: 69  VQAAIDYVNSH 79

>pdb|4DXE|H Chain H, 2.52 Angstrom Resolution Crystal Structure Of The Acyl-Carrier-Protein Synthase (Acps)-Acyl Carrier Protein (Acp) Protein-Protein Complex From Staphylococcus Aureus Subsp. Aureus Col Length = 101

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 45/71 (63%)
Query: 47  EVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVR 106
           E  D+V  ++     VD  +VT D  F+ DLG DSLD  E+VM LE+EF  EIPD+EA +
Sbjct: 26  ENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEK 85
Query: 107 IDACNLAIEYI 117
           I+    A+++I
Sbjct: 86  INTVGDAVKFI 96

>pdb|2QNW|A Chain A, Toxoplasma Gondii Apicoplast-Targeted Acyl Carrier Protein Length = 82

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 47/70 (67%)
Query: 48  VIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRI 107
           +++RV  VV     VD +++ P+ +F KDL  DSLD+VE+VMA EE+F + IPD+EA +I
Sbjct: 8   LLERVKDVVADQLGVDRARINPESNFIKDLDADSLDSVELVMAFEEKFGVSIPDEEASKI 67
Query: 108 DACNLAIEYI 117
                A+ YI
Sbjct: 68  ATVQDALSYI 77

>pdb|2EHS|A Chain A, Crystal Structure Of Acyl Carrier Protein From Aquifex Aeolicus (Form 1) Length = 77

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 50  DRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDA 109
           +RV  ++     V+  ++TP+  F +DLG DSLD VE++MA EEEF +EIPD++A +I  
Sbjct: 4   ERVKEIIAEQLGVEKEKITPEAKFVEDLGADSLDVVELIMAFEEEFGIEIPDEDAEKIQT 63
Query: 110 CNLAIEYI 117
               I Y+
Sbjct: 64  VGDVINYL 71

>pdb|2X2B|A Chain A, Crystal Structure Of Malonyl-Acp (Acyl Carrier Protein) From Bacillus Subtilis Length = 78

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 47  EVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVR 106
           + ++RV  ++     VD + V  +  F++DLG DSLD VE+VM LE+EF +EI D++A +
Sbjct: 4   DTLERVTKIIVDRLGVDEADVKLEASFKEDLGADSLDVVELVMELEDEFDMEISDEDAEK 63
Query: 107 IDACNLAIEYIYNHP 121
           I     A+ YI N  
Sbjct: 64  IATVGDAVNYIQNQQ 78

>pdb|1HY8|A Chain A, Solution Structure Of B. Subtilis Acyl Carrier Protein Length = 76

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 47  EVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVR 106
           + ++RV  ++     VD + V  +  F++DLG DSLD VE+VM LE+EF +EI D++A +
Sbjct: 2   DTLERVTKIIVDRLGVDEADVKLEASFKEDLGADSLDVVELVMELEDEFDMEISDEDAEK 61
Query: 107 IDACNLAIEYIYNHP 121
           I     A+ YI N  
Sbjct: 62  IATVGDAVNYIQNQQ 76

>pdb|2L3V|A Chain A, Nmr Structure Of Acyl Carrier Protein From Brucella Melitensis Length = 79

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 50  DRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDA 109
           +RV  +V     VD  +VT    F  DLG DSLD VE+VMA EEEF +EIPD  A  I  
Sbjct: 7   ERVKKIVVEHLGVDADKVTEGASFIDDLGADSLDTVELVMAFEEEFGVEIPDDAAETILT 66
Query: 110 CNLAIEYI 117
              A+++I
Sbjct: 67  VGDAVKFI 74

>pdb|1F80|D Chain D, Holo-(Acyl Carrier Protein) Synthase In Complex With Holo- (Acyl Carrier Protein) Length = 81

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%)
Query: 43  LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
           L   + ++RV  ++     VD + V  +  F++DLG D LD VE+VM LE+EF +EI D+
Sbjct: 3   LGSADTLERVTKIIVDRLGVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDE 62
Query: 103 EAVRIDACNLAIEYIYNH 120
           +A +I     A+ YI N 
Sbjct: 63  DAEKIATVGDAVNYIQNQ 80

>pdb|3GZL|A Chain A, Crystal Structure Of Holo Pfacp Disulfide-Linked Dimer Length = 81

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 41/56 (73%)
Query: 62  VDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYI 117
           V+  ++  + +F KDLG DSLD VE++MALEE+F + I D++A++I+    AI+YI
Sbjct: 20  VEEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYI 75

>pdb|2FQ0|A Chain A, Solution Structure Of Major Conformation Of Holo-Acyl Carrier Protein From Malaria Parasite Plasmodium Falciparum Length = 79

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 41/56 (73%)
Query: 62  VDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYI 117
           V+  ++  + +F KDLG DSLD VE++MALEE+F + I D++A++I+    AI+YI
Sbjct: 18  VEEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYI 73

>pdb|2LOL|A Chain A, Nmr Structure Of An Acyl-Carrier Protein From Rickettsia Prowazekii, Seattle Structural Genomics Center For Infectious Disease (Ssgcid) Length = 81

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 44  TKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKE 103
           T +++  +V+ +V      D + +T D  F +DL  DSLD VE++MA+E E+ ++IPD E
Sbjct: 3   TTDKIEQKVIEMVAEKLNKDKAIITTDSRFIEDLKADSLDTVELMMAIEVEYGIDIPDDE 62
Query: 104 AVRIDACNLAIEYI 117
           A +I   +  I+YI
Sbjct: 63  ATKIKTVSDVIKYI 76

>pdb|2L4B|A Chain A, Solution Structure Of A Putative Acyl Carrier Protein From Anaplasma Phagocytophilum. Seattle Structural Genomics Center For Infectious Disease Target Anpha.01018.A Length = 88

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 42  HLTKEEVIDRVL-SVVKCFPKVDPSQ--VTPDVHFQKDLGLDSLDNVEIVMALEEEFKLE 98
            +  EE+  +V+ SV+ C    D  +  ++   +  KD  LDSLD V+++M+LEE F LE
Sbjct: 3   SMVSEEIKAQVMESVIGCLKLNDEQKQILSGTTNLAKDFNLDSLDFVDLIMSLEERFSLE 62
Query: 99  IPDKEAVRIDACNLAIEYI 117
           I D++A +++  +    YI
Sbjct: 63  ISDEDAQKLETVDDICRYI 81

>pdb|2CNR|A Chain A, Structural Studies On The Interaction Of Scfas Acp With Acps Length = 82

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 44  TKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKE 103
           T+EE++  +  +V     +    V  D  F  DL +DSL  VE+V+A EE F ++IPD +
Sbjct: 4   TQEEIVAGLAEIVNEIAGIPVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDD 63
Query: 104 AVRIDACNLAIEYIYNH 120
              +     A +YI +H
Sbjct: 64  VKNLKTVGDATKYILDH 80

>pdb|2KOO|A Chain A, Nmr Solution Structures Of Hexanoyl-Acp From The Streptomyces Coelicolor Fatty Acid Synthase Length = 81

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 44  TKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKE 103
           T+EE++  +  +V     +    V  D  F  DL +DSL  VE+V+A EE F ++IPD +
Sbjct: 3   TQEEIVAGLAEIVNEIAGIPVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDD 62
Query: 104 AVRIDACNLAIEYIYNH 120
              +     A +YI +H
Sbjct: 63  VKNLKTVGDATKYILDH 79

>pdb|2AVA|A Chain A, Solution Structure Of Stearoyl-Acyl Carrier Protein Length = 82

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 45  KEEVIDRVLSVVKCFPKVDPSQV-TPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKE 103
           K+E ID+V  +VK    +    V T D  F K LG DSLD VEIVM LEEEF + + + +
Sbjct: 2   KKETIDKVSDIVKEKLALGADVVVTADSEFSK-LGADSLDTVEIVMNLEEEFGINVDEDK 60
Query: 104 AVRIDACNLAIEYI 117
           A  I     A + I
Sbjct: 61  AQDISTIQQAADVI 74

>pdb|2XZ0|D Chain D, The Structure Of The 2:1 (Partially Occupied) Complex Between Stearoyl Acyl Carrier Protein Desaturase From Ricinus Communis (Castor Bean) And Acyl Carrier Protein. Length = 82

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 45  KEEVIDRVLSVVKCFPKVDPSQV-TPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKE 103
           K+E ID+V  +VK    +    V T D  F K LG D LD VEIVM LEEEF + + + +
Sbjct: 2   KKETIDKVSDIVKEKLALGADVVVTADSEFSK-LGADXLDTVEIVMNLEEEFGINVDEDK 60
Query: 104 AVRIDACNLAIEYI 117
           A  I     A + I
Sbjct: 61  AQDISTIQQAADVI 74

>pdb|1KLP|A Chain A, The Solution Structure Of Acyl Carrier Protein From Mycobacterium Tuberculosis Length = 115

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 62  VDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYI 117
           ++PS++TP+  F  DL +DSL  VEI +  E+++ ++IPD++   +      + YI
Sbjct: 22  IEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYI 77

>pdb|3LMO|A Chain A, Crystal Structure Of Specialized Acyl Carrier Protein (Rpa2022) From Rhodopseudomonas Palustris, Northeast Structural Genomics Consortium Target Rpr324 Length = 101

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 48  VIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIP 100
             DRV +++     +    +TP+ H   DLG+DSLD ++I  A+++ F +++P
Sbjct: 4   TFDRVATIIAETCDIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLP 56

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	124
2dnw_A	99	Acyl carrier protein; ACP, fatty acid biosynthesis	7e-34
2l4b_A	88	Acyl carrier protein; infectious disease, human gr	1e-28
2ava_A	82	ACP I, acyl carrier protein I, chloroplast; four-h	3e-27
3ce7_A	107	Specific mitochodrial acyl carrier protein; malari	4e-25
1vku_A	100	Acyl carrier protein; TM0175, structural genomics,	1e-24
2qnw_A	82	Acyl carrier protein; malaria, SGC, structural gen	3e-24
3ejb_A	97	Acyl carrier protein; protein-protein complex, cyt	6e-24
2l3v_A	79	ACP, acyl carrier protein; structural genomi seatt	8e-24
2lol_A	81	ACP, acyl carrier protein; lipid transport; NMR {R	9e-24
1l0i_A	78	Acyl carrier protein; acyl chain binding, fatty ac	9e-24
1x3o_A	80	Acyl carrier protein; structural genomics, riken s	1e-23
2kwl_A	84	ACP, acyl carrier protein; structural genomics, se	1e-22
1klp_A	115	ACP, ACPM, meromycolate extension acyl carrier pro	1e-22
2cnr_A	82	FAS, ACP, acyl carrier protein; polykdetide, phosp	2e-22
3gzm_A	81	Acyl carrier protein; helix bundle, phosphopanteth	2e-22
4dxe_H	101	ACP, acyl carrier protein; acyl-carrier-protein sy	8e-22
2ehs_A	77	ACP, acyl carrier protein; lipid transport, struct	1e-21
2cgq_A	113	Acyl carrier protein ACPA; RV0033, protein transpo	2e-20
2kw2_A	101	Specialized acyl carrier protein; structural genom	3e-20
1f80_D	81	Acyl carrier protein; transferase; HET: PN2; 2.30A	7e-17
2lte_A	103	Specialized acyl carrier protein; APO protein, tra	2e-11
1nq4_A	95	Oxytetracycline polyketide synthase acyl carrier p	1e-10
2kci_A	87	Putative acyl carrier protein; alpha, ACP, PCP, st	3e-10
2jq4_A	105	AGR_C_4658P, hypothetical protein ATU2571; ATC2521	6e-10
1af8_A	86	Actinorhodin polyketide synthase acyl carrier Pro;	3e-09
2kr5_A	89	PKS, aflatoxin biosynthesis polyketide synthase; a	4e-09
1or5_A	83	Acyl carrier protein; ACP, biosynthesis, frenolici	5e-07
2afd_A	88	Protein ASL1650; twisted antiparallel helical bund	2e-06
2l22_A	212	Mupirocin didomain acyl carrier protein; biosynthe	2e-06
2l22_A	212	Mupirocin didomain acyl carrier protein; biosynthe	5e-06
1dv5_A	80	APO-DCP, APO-D-alanyl carrier protein; 3-helix bun	1e-05
2cg5_B	91	Fatty acid synthase; transferase-hydrolase complex	2e-05
2liu_A	99	CURA; holo state, transferase; NMR {Lyngbya majusc	8e-05
2lki_A	105	Putative uncharacterized protein; helical bundle,	2e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
1fh1_A	92	NODF, nodulation protein F; ROOT nodulation factor	4e-04

>2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score =  112 bits (282), Expect = 7e-34
 Identities = 40/87 (45%), Positives = 57/87 (65%)

Query: 37  SSHDDHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFK 96
           SS    LT E + DRVL V+K + K+DP +++ + HF KDLGLDSLD VEI+MA+E+EF 
Sbjct: 5   SSGMPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFG 64

Query: 97  LEIPDKEAVRIDACNLAIEYIYNHPMA 123
            EIPD +A ++      ++YI +    
Sbjct: 65  FEIPDIDAEKLMCPQEIVDYIADKKDV 91

>2l4b_A Acyl carrier protein; infectious disease, human granulocytic anaplasmosis, ssgcid, structural genomics; NMR {Anaplasma phagocytophilum} Length = 88

 Score = 98.6 bits (246), Expect = 1e-28
 Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 3/86 (3%)

Query: 42  HLTKEEVIDRVLSVVKCFPKV---DPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLE 98
            +  EE+  +V+  V    K+       ++   +  KD  LDSLD V+++M+LEE F LE
Sbjct: 3   SMVSEEIKAQVMESVIGCLKLNDEQKQILSGTTNLAKDFNLDSLDFVDLIMSLEERFSLE 62

Query: 99  IPDKEAVRIDACNLAIEYIYNHPMAS 124
           I D++A +++  +    YI +    +
Sbjct: 63  ISDEDAQKLETVDDICRYIASKSSDA 88

>2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C* Length = 82

 Score = 95.4 bits (238), Expect = 3e-27
 Identities = 28/79 (35%), Positives = 37/79 (46%)

Query: 45  KEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEA 104
           K+E ID+V  +VK    +    V         LG DSLD VEIVM LEEEF + + + +A
Sbjct: 2   KKETIDKVSDIVKEKLALGADVVVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKA 61

Query: 105 VRIDACNLAIEYIYNHPMA 123
             I     A + I      
Sbjct: 62  QDISTIQQAADVIEGLLEK 80

>3ce7_A Specific mitochodrial acyl carrier protein; malaria, mitochondrial, ACP, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.64A {Toxoplasma} Length = 107

 Score = 90.5 bits (224), Expect = 4e-25
 Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 4/83 (4%)

Query: 42  HLTKEEVIDRVLSVVKCFP----KVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKL 97
                 V + ++ + + F     KV PS    ++  ++D   D LD VE V+ +EE F +
Sbjct: 14  DTDINAVTNYIVGMCQKFLQKGEKVTPSSKLEELRTREDRLWDCLDTVEFVLDVEEIFDV 73

Query: 98  EIPDKEAVRIDACNLAIEYIYNH 120
            +PD+ A          +++ + 
Sbjct: 74  TVPDEVADNFQTLQEIADFVVSE 96

>1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1 Length = 100

 Score = 89.4 bits (222), Expect = 1e-24
 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 1/82 (1%)

Query: 39  HDDHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLE 98
           H  H+ ++++I + + +       D   V  +  F K+LG DS+D +++VM  E+EF L 
Sbjct: 9   HHHHMERKKLIAKFVEIASEKMGKDLETVDEENTF-KELGFDSIDVIDLVMFFEDEFALR 67

Query: 99  IPDKEAVRIDACNLAIEYIYNH 120
           I D+E  +I      I+ +   
Sbjct: 68  IEDEEISKIRKVKDLIDIVIKK 89

>2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii} Length = 82

 Score = 87.7 bits (218), Expect = 3e-24
 Identities = 32/78 (41%), Positives = 47/78 (60%)

Query: 43  LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
                +++RV  VV     VD +++ P+ +F KDL  DSLD+VE+VMA EE+F + IPD+
Sbjct: 3   SDDRPLLERVKDVVADQLGVDRARINPESNFIKDLDADSLDSVELVMAFEEKFGVSIPDE 62

Query: 103 EAVRIDACNLAIEYIYNH 120
           EA +I     A+ YI   
Sbjct: 63  EASKIATVQDALSYIEKA 80

>3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A* Length = 97

 Score = 87.1 bits (216), Expect = 6e-24
 Identities = 35/75 (46%), Positives = 46/75 (61%)

Query: 46  EEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAV 105
             + +RV  ++     V   +VT +  F +DLG DSLD VE+VMALEEEF  EIPD+EA 
Sbjct: 21  STIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAE 80

Query: 106 RIDACNLAIEYIYNH 120
           +I     AI+YI  H
Sbjct: 81  KITTVQAAIDYINGH 95

>2l3v_A ACP, acyl carrier protein; structural genomi seattle structural genomics center for infectious disease, lipid binding protein; NMR {Brucella melitensis} Length = 79

 Score = 86.2 bits (214), Expect = 8e-24
 Identities = 32/77 (41%), Positives = 42/77 (54%)

Query: 44  TKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKE 103
           +  +  +RV  +V     VD  +VT    F  DLG DSLD VE+VMA EEEF +EIPD  
Sbjct: 1   SMSDTAERVKKIVVEHLGVDADKVTEGASFIDDLGADSLDTVELVMAFEEEFGVEIPDDA 60

Query: 104 AVRIDACNLAIEYIYNH 120
           A  I     A+++I   
Sbjct: 61  AETILTVGDAVKFIDKA 77

>2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str} Length = 81

 Score = 86.2 bits (214), Expect = 9e-24
 Identities = 28/77 (36%), Positives = 46/77 (59%)

Query: 44  TKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKE 103
           T +++  +V+ +V      D + +T D  F +DL  DSLD VE++MA+E E+ ++IPD E
Sbjct: 3   TTDKIEQKVIEMVAEKLNKDKAIITTDSRFIEDLKADSLDTVELMMAIEVEYGIDIPDDE 62

Query: 104 AVRIDACNLAIEYIYNH 120
           A +I   +  I+YI   
Sbjct: 63  ATKIKTVSDVIKYIKER 79

>1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A Length = 78

 Score = 86.1 bits (214), Expect = 9e-24
 Identities = 34/75 (45%), Positives = 46/75 (61%)

Query: 46  EEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAV 105
             + +RV  ++     V   +VT +  F +DLG DSLD VE+VMALEEEF  EIPD+EA 
Sbjct: 2   STIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAE 61

Query: 106 RIDACNLAIEYIYNH 120
           ++     AI+YI  H
Sbjct: 62  KMTTVQAAIDYINGH 76

>1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus} Length = 80

 Score = 86.2 bits (214), Expect = 1e-23
 Identities = 34/78 (43%), Positives = 53/78 (67%)

Query: 43  LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
           +T++E+ ++V +V+    +V+P +VT +  F +DLG DSLD VE++M LE+EF LEI D+
Sbjct: 1   MTEQEIFEKVKAVIADKLQVEPEKVTLEARFIEDLGADSLDTVELIMGLEDEFGLEISDE 60

Query: 103 EAVRIDACNLAIEYIYNH 120
           EA +I     A+EYI   
Sbjct: 61  EAEKIRTVKDAVEYIKAK 78

>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi} Length = 84

 Score = 83.9 bits (208), Expect = 1e-22
 Identities = 22/77 (28%), Positives = 37/77 (48%)

Query: 44  TKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKE 103
             +E+  +V S++         ++T D  F +DL  DSLD  E++  LEE F  +IP+ E
Sbjct: 6   DNDEIFSKVRSIISEQLDKKEDEITTDSRFVEDLNADSLDIYELLYLLEEAFDDKIPENE 65

Query: 104 AVRIDACNLAIEYIYNH 120
           A   +     + +I   
Sbjct: 66  ANEFETVGDVVNFIKKR 82

>1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1 Length = 115

 Score = 84.5 bits (209), Expect = 1e-22
 Identities = 23/78 (29%), Positives = 46/78 (58%)

Query: 43  LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
           +T+EE+I  +  +++    ++PS++TP+  F  DL +DSL  VEI +  E+++ ++IPD+
Sbjct: 3   VTQEEIIAGIAEIIEEVTGIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDE 62

Query: 103 EAVRIDACNLAIEYIYNH 120
           +   +      + YI   
Sbjct: 63  DLAGLRTVGDVVAYIQKL 80

>2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A* Length = 82

 Score = 83.1 bits (206), Expect = 2e-22
 Identities = 26/78 (33%), Positives = 41/78 (52%)

Query: 43  LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
            T+EE++  +  +V     +    V  D  F  DL +DSL  VE+V+A EE F ++IPD 
Sbjct: 3   ATQEEIVAGLAEIVNEIAGIPVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDD 62

Query: 103 EAVRIDACNLAIEYIYNH 120
           +   +     A +YI +H
Sbjct: 63  DVKNLKTVGDATKYILDH 80

>3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} PDB: 3gzl_A* 2fq0_A* 2fq2_A* Length = 81

 Score = 83.1 bits (206), Expect = 2e-22
 Identities = 27/77 (35%), Positives = 48/77 (62%)

Query: 44  TKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKE 103
           + +   D +  ++     V+  ++  + +F KDLG DSLD VE++MALEE+F + I D++
Sbjct: 2   SLKSTFDDIKKIISKQLSVEEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQD 61

Query: 104 AVRIDACNLAIEYIYNH 120
           A++I+    AI+YI  +
Sbjct: 62  ALKINTVQDAIDYIEKN 78

>4dxe_H ACP, acyl carrier protein; acyl-carrier-protein synthase, type II acid synthesis pathway; 2.51A {Staphylococcus aureus} Length = 101

 Score = 82.1 bits (203), Expect = 8e-22
 Identities = 32/77 (41%), Positives = 46/77 (59%)

Query: 44  TKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKE 103
              E  D+V  ++     VD  +VT D  F+ DLG DSLD  E+VM LE+EF  EIPD+E
Sbjct: 23  NAMENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEE 82

Query: 104 AVRIDACNLAIEYIYNH 120
           A +I+    A+++I + 
Sbjct: 83  AEKINTVGDAVKFINSL 99

>2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A Length = 77

 Score = 80.4 bits (199), Expect = 1e-21
 Identities = 29/73 (39%), Positives = 45/73 (61%)

Query: 48  VIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRI 107
           + +RV  ++     V+  ++TP+  F +DLG DSLD VE++MA EEEF +EIPD++A +I
Sbjct: 2   LEERVKEIIAEQLGVEKEKITPEAKFVEDLGADSLDVVELIMAFEEEFGIEIPDEDAEKI 61

Query: 108 DACNLAIEYIYNH 120
                 I Y+   
Sbjct: 62  QTVGDVINYLKEK 74

>2cgq_A Acyl carrier protein ACPA; RV0033, protein transport, phosphopant; 1.83A {Mycobacterium tuberculosis} Length = 113

 Score = 78.8 bits (194), Expect = 2e-20
 Identities = 15/78 (19%), Positives = 30/78 (38%)

Query: 43  LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
           L  +  ++  ++            +T +     DLG DSL   +++  LE+EF + I  +
Sbjct: 21  LYFQGAMEEAINATIQRILRTDRGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFR 80

Query: 103 EAVRIDACNLAIEYIYNH 120
           +A  I         +   
Sbjct: 81  DAQNIKTVGDVYTSVAVW 98

>2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A Length = 101

 Score = 77.9 bits (192), Expect = 3e-20
 Identities = 19/73 (26%), Positives = 37/73 (50%)

Query: 46  EEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAV 105
               DRV +++     +    +TP+ H   DLG+DSLD ++I  A+++ F +++P ++  
Sbjct: 2   TSTFDRVATIIAETCDIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEKWT 61

Query: 106 RIDACNLAIEYIY 118
           +      A    Y
Sbjct: 62  QEVNDGKATTEQY 74

>1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A Length = 81

 Score = 68.6 bits (168), Expect = 7e-17
 Identities = 30/78 (38%), Positives = 46/78 (58%)

Query: 43  LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
           L   + ++RV  ++     VD + V  +  F++DLG D LD VE+VM LE+EF +EI D+
Sbjct: 3   LGSADTLERVTKIIVDRLGVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDE 62

Query: 103 EAVRIDACNLAIEYIYNH 120
           +A +I     A+ YI N 
Sbjct: 63  DAEKIATVGDAVNYIQNQ 80

>2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa} Length = 103

 Score = 55.2 bits (132), Expect = 2e-11
 Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 1/78 (1%)

Query: 46  EEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAV 105
            ++ D +L+V+     V   +++ D   + DL  DSL   E+ + L +EF +   D E  
Sbjct: 25  NDMEDHLLTVLSVASGVPKEEISRDSRME-DLAFDSLVVSELSLKLRKEFGVTGVDDELD 83

Query: 106 RIDACNLAIEYIYNHPMA 123
            ++  +   + +  H  A
Sbjct: 84  LLETVDELFQLVEKHRAA 101

>1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1 Length = 95

 Score = 53.4 bits (128), Expect = 1e-10
 Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 1/82 (1%)

Query: 43  LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
           LT  +++  +         +D      DV F   LG DSL  +  V  +E ++ +++ D 
Sbjct: 4   LTLSDLLTLLRECAGEEESIDLGGDVEDVAFD-ALGYDSLALLNTVGRIERDYGVQLGDD 62

Query: 103 EAVRIDACNLAIEYIYNHPMAS 124
              +       IE        +
Sbjct: 63  AVEKATTPRALIEMTNASLTGA 84

>2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1 Length = 105

 Score = 51.5 bits (123), Expect = 6e-10
 Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 7/84 (8%)

Query: 46  EEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAV 105
              I  +L+     P      +  +       GL S  +V++++ +EE F +E PD    
Sbjct: 24  NATIREILAKFGQLP-TPVDTIADEADL-YAAGLSSFASVQLMLGIEEAFDIEFPDNLLN 81

Query: 106 R-----IDACNLAIEYIYNHPMAS 124
           R     I A    ++ I +   A+
Sbjct: 82  RKSFASIKAIEDTVKLILDGKEAA 105

>1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A* Length = 86

 Score = 49.5 bits (118), Expect = 3e-09
 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 1/84 (1%)

Query: 41  DHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIP 100
             LT +++   ++         D S    D+ F+ D+G DSL  +E    LE  + + IP
Sbjct: 3   TLLTTDDLRRALVECAGETDGTDLSGDFLDLRFE-DIGYDSLALMETAARLESRYGVSIP 61

Query: 101 DKEAVRIDACNLAIEYIYNHPMAS 124
           D  A R+D     ++ I      +
Sbjct: 62  DDVAGRVDTPRELLDLINGALAEA 85

>2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus} Length = 89

 Score = 49.1 bits (117), Expect = 4e-09
 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 44  TKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKE 103
              E +D V+ VV     +   ++T D +F  D+G+DSL ++ I     E+  L++  + 
Sbjct: 8   VSNEKLDAVMRVVSEESGIALEELTDDSNFA-DMGIDSLSSMVIGSRFREDLGLDLGPEF 66

Query: 104 AVRID 108
           ++ ID
Sbjct: 67  SLFID 71

>1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1 Length = 83

 Score = 43.3 bits (102), Expect = 5e-07
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 69  PDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHPMAS 124
            D  F  DLG DSL  +E    L++ + + + D+   R+      ++ +   P  +
Sbjct: 29  LDTPFV-DLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTTPATA 83

>2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A Length = 88

 Score = 42.0 bits (99), Expect = 2e-06
 Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 43  LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIP 100
            + E++   ++        VDP  +  +  F  +  L+S   + ++  LE+    E+ 
Sbjct: 10  ASVEDIQSWLIDQFAQQLDVDPDDIDMEESFD-NYDLNSSKALILLGRLEKWLGKELN 66

>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens} Length = 212

 Score = 43.8 bits (103), Expect = 2e-06
 Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 40  DDHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEI 99
                +E + D +   +     +DP Q+     F  DLG+DS+   + +  +   F +++
Sbjct: 123 QASAQRESIQDYLKQSLGELLFLDPGQLRSGAQFL-DLGMDSVTGTQWMRGVSRHFSIQL 181

Query: 100 P 100
            
Sbjct: 182 A 182

>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens} Length = 212

 Score = 42.6 bits (100), Expect = 5e-06
 Identities = 12/57 (21%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 44  TKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIP 100
             +E    +   +      +P Q+     F  +LGLDS+   + +  + + ++L+IP
Sbjct: 23  ADDECAQFLRQSLAAMLYCEPGQIRDGSRFL-ELGLDSVIAAQWIREINKHYQLKIP 78

>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A Length = 80

 Score = 39.9 bits (93), Expect = 1e-05
 Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 2/74 (2%)

Query: 46  EEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAV 105
           E + + VL ++      D  +   D++  +   LDS+  V++++ L+ +F ++ P  E  
Sbjct: 3   EAIKNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFD 62

Query: 106 R--IDACNLAIEYI 117
           R   D  N  I  +
Sbjct: 63  RKEWDTPNKIIAKV 76

>2cg5_B Fatty acid synthase; transferase-hydrolase complex, transferase/hydrolase (comple fatty acid biosynthesis, phosphopantetheine transferase; HET: COA; 2.7A {Homo sapiens} PDB: 2png_A Length = 91

 Score = 39.3 bits (91), Expect = 2e-05
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 63  DPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKE 103
           D + V  D     DLGLD+L +VE+   LE E  L +  +E
Sbjct: 23  DLAAVNLDSSLA-DLGLDALMSVEVRQTLERELNLVLSVRE 62

>2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A* Length = 99

 Score = 38.1 bits (89), Expect = 8e-05
 Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 1/65 (1%)

Query: 36  MSSHDDHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEF 95
           M+   + +   E+   +   +      + S++  D  F  DLGLDS+  VE    + + +
Sbjct: 10  MTPQVNQVNLSEIKQVLKQQLAEALYTEESEIAEDQKF-VDLGLDSIVGVEWTTTINQTY 68

Query: 96  KLEIP 100
            L + 
Sbjct: 69  NLNLK 73

>2lki_A Putative uncharacterized protein; helical bundle, acyl carrier, phosphopantetheine, fatty acid biosynthesis, lipid synthesis, PSI-biology; HET: PNS; NMR {Nitrosomonas europaea} Length = 105

 Score = 37.3 bits (86), Expect = 2e-04
 Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 44  TKEEVIDRVLSVVKCFPKVD--PSQVTPDVH-FQKDLGLDSLDNVEIVMALEEEFKLEIP 100
              + ++ V +++     +      +T           LDS+  V ++ ALEE F   + 
Sbjct: 21  GHMQHLEAVRNILGDVLNLGERKHTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVD 80

Query: 101 DKE 103
           D E
Sbjct: 81  DDE 83

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 38.3 bits (88), Expect = 2e-04
 Identities = 31/160 (19%), Positives = 53/160 (33%), Gaps = 47/160 (29%)

Query: 7   VLDHVRVP---------VQTLALTGSKQRWSVLGSLR----FMSSHDDHLTKEEVIDRVL 53
           VL +V+            + L  T  KQ    L +       +  H   LT +EV   +L
Sbjct: 249 VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308

Query: 54  SVVKCFPKVDPSQVT---PDV-------------HFQ--KDLGLDSLDNVEIVMALE--- 92
             + C P+  P +V    P                +   K +  D L  + I  +L    
Sbjct: 309 KYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTI-IESSLNVLE 367

Query: 93  -EEFK-----LEI-PDKEAVRIDACNLAI---EYIYNHPM 122
             E++     L + P   +  I    L++   + I +  M
Sbjct: 368 PAEYRKMFDRLSVFP--PSAHIPTILLSLIWFDVIKSDVM 405

>1fh1_A NODF, nodulation protein F; ROOT nodulation factor, protein backbone fold, lipid binding protein; NMR {Rhizobium leguminosarum} SCOP: i.11.1.1 Length = 92

 Score = 35.8 bits (82), Expect = 4e-04
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 4/63 (6%)

Query: 41  DHLTKEEVI---DRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKL 97
           D LT E +      V +       V   ++T D      LG+DSL   +++  LE+ + +
Sbjct: 3   DQLTLEIISAINKLVKAENGERTSVALGEITTDTEL-TSLGIDSLGLADVLWDLEQLYGI 61

Query: 98  EIP 100
           +I 
Sbjct: 62  KIE 64

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	124
3ejb_A	97	Acyl carrier protein; protein-protein complex, cyt	99.84
2dnw_A	99	Acyl carrier protein; ACP, fatty acid biosynthesis	99.79
2l4b_A	88	Acyl carrier protein; infectious disease, human gr	99.78
2kci_A	87	Putative acyl carrier protein; alpha, ACP, PCP, st	99.78
2cnr_A	82	FAS, ACP, acyl carrier protein; polykdetide, phosp	99.78
2lol_A	81	ACP, acyl carrier protein; lipid transport; NMR {R	99.77
4dxe_H	101	ACP, acyl carrier protein; acyl-carrier-protein sy	99.77
2kwl_A	84	ACP, acyl carrier protein; structural genomics, se	99.77
1f80_D	81	Acyl carrier protein; transferase; HET: PN2; 2.30A	99.77
3gzm_A	81	Acyl carrier protein; helix bundle, phosphopanteth	99.77
2kjs_A	87	Putative acyl carrier protein; alpha, ACP, PNS, st	99.76
3ce7_A	107	Specific mitochodrial acyl carrier protein; malari	99.76
2l9f_A	102	CALE8, meacp; transferase, acyl carrier protein; N	99.75
1vku_A	100	Acyl carrier protein; TM0175, structural genomics,	99.74
1klp_A	115	ACP, ACPM, meromycolate extension acyl carrier pro	99.74
1x3o_A	80	Acyl carrier protein; structural genomics, riken s	99.74
2cgq_A	113	Acyl carrier protein ACPA; RV0033, protein transpo	99.73
2ava_A	82	ACP I, acyl carrier protein I, chloroplast; four-h	99.72
2qnw_A	82	Acyl carrier protein; malaria, SGC, structural gen	99.72
2lki_A	105	Putative uncharacterized protein; helical bundle,	99.71
1af8_A	86	Actinorhodin polyketide synthase acyl carrier Pro;	99.71
1dv5_A	80	APO-DCP, APO-D-alanyl carrier protein; 3-helix bun	99.71
1l0i_A	78	Acyl carrier protein; acyl chain binding, fatty ac	99.7
2lte_A	103	Specialized acyl carrier protein; APO protein, tra	99.51
2jq4_A	105	AGR_C_4658P, hypothetical protein ATU2571; ATC2521	99.67
2kw2_A	101	Specialized acyl carrier protein; structural genom	99.67
2amw_A	83	Hypothetical protein NE2163; all helical protein,	99.67
1or5_A	83	Acyl carrier protein; ACP, biosynthesis, frenolici	99.66
2ehs_A	77	ACP, acyl carrier protein; lipid transport, struct	99.62
2l3v_A	79	ACP, acyl carrier protein; structural genomi seatt	99.62
1nq4_A	95	Oxytetracycline polyketide synthase acyl carrier p	99.61
1fh1_A	92	NODF, nodulation protein F; ROOT nodulation factor	99.57
2afd_A	88	Protein ASL1650; twisted antiparallel helical bund	99.55
2kr5_A	89	PKS, aflatoxin biosynthesis polyketide synthase; a	99.5
2liu_A	99	CURA; holo state, transferase; NMR {Lyngbya majusc	99.5
2l22_A	212	Mupirocin didomain acyl carrier protein; biosynthe	99.46
2ju1_A	95	Erythronolide synthase; carrier protein domain, mo	99.41
2cg5_B	91	Fatty acid synthase; transferase-hydrolase complex	99.39
4i4d_A	93	Peptide synthetase NRPS type II-PCP; structural ge	99.35
1dny_A	91	Non-ribosomal peptide synthetase peptidyl carrier	99.32
2l22_A	212	Mupirocin didomain acyl carrier protein; biosynthe	99.31
3tej_A	329	Enterobactin synthase component F; nonribosomal pe	98.88
2cq8_A	110	10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH	98.87
2jgp_A	520	Tyrocidine synthetase 3; multifunctional enzyme, a	98.58
2fq1_A	287	Isochorismatase; ENTB, NRPS, multi-domain, ACP, hy	98.57
2vsq_A	1304	Surfactin synthetase subunit 3; ligase, peptidyl c	98.34
4f6l_B	508	AUSA reductase domain protein; thioester reductase	98.25
3rg2_A	617	Enterobactin synthase component E (ENTE), 2,3-DIH	98.09
4dg8_A	620	PA1221; ANL superfamily, adenylation domain, pepti	98.05
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	97.28
2px6_A	316	Thioesterase domain; thioesaterse domain, orlistat	91.59
1dd4_C	40	50S ribosomal protein L7/L12; dimer formation, fle	80.37

>3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A*

Probab=99.84  E-value=3.3e-21  Score=128.51  Aligned_cols=94  Identities=38%  Similarity=0.479  Sum_probs=75.8

Q ss_pred             chhhhhccccCCCCCCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccC
Q 033233           28 SVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRI  107 (124)
Q Consensus        28 ~~~~~~~~~~~~~~~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~  107 (124)
                      ++.+|+|........++++++.++|++++++.+++++++|+++++|.++||+|||++++|+..||++|||+|+.+++.++
T Consensus         3 ~~~~~~~~~~~~~~~~t~~~i~~~l~~iia~~l~~~~~~i~~d~~l~~dLGlDSL~~vel~~~lE~~fgi~i~~~~l~~~   82 (97)
T 3ejb_A            3 SHHHHHHSSGLVPRGSHMSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKI   82 (97)
T ss_dssp             ---------------CCCCCHHHHHHHHHHHHSCCCTTTSCTTCBTTTTTCCCTTHHHHHHHHHHHHTTCCCCHHHHHHC
T ss_pred             CCcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCcCHHHCCCCCCchhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhC
Confidence            35678888888888999999999999999999999999999999997799999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHcCC
Q 033233          108 DACNLAIEYIYNHP  121 (124)
Q Consensus       108 ~Tv~dlv~~I~~~~  121 (124)
                      .|++++++||.+++
T Consensus        83 ~Tv~~l~~~i~~~~   96 (97)
T 3ejb_A           83 TTVQAAIDYINGHQ   96 (97)
T ss_dssp             CBHHHHHHHHHHC-
T ss_pred             CCHHHHHHHHHHhc
Confidence            99999999998775

>2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.79  E-value=9.8e-19  Score=116.26  Aligned_cols=84  Identities=45%  Similarity=0.705  Sum_probs=78.8

Q ss_pred             CCCCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHc
Q 033233           40 DDHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYN  119 (124)
Q Consensus        40 ~~~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~  119 (124)
                      -++|+++++.+.|++++++.++++.++|+++++|..+||+|||++++|+..||++||++|+.+++.++.|++++++||.+
T Consensus         8 m~~m~~~~i~~~l~~~l~~~l~~~~~~i~~d~~l~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~   87 (99)
T 2dnw_A            8 MPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDYIAD   87 (99)
T ss_dssp             CCCCCHHHHHHHHHHHHHHCTTSCTTTCCTTCCCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCSHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHhCCCHhhCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHH
Confidence            45799999999999999999999999999999996699999999999999999999999999999999999999999987


Q ss_pred             CCCC
Q 033233          120 HPMA  123 (124)
Q Consensus       120 ~~~a  123 (124)
                      ++++
T Consensus        88 ~~~~   91 (99)
T 2dnw_A           88 KKDV   91 (99)
T ss_dssp             HCCS
T ss_pred             Hhcc
Confidence            7643

>2l4b_A Acyl carrier protein; infectious disease, human granulocytic anaplasmosis, ssgcid, structural genomics; NMR {Anaplasma phagocytophilum}

Probab=99.78  E-value=7.4e-20  Score=118.90  Aligned_cols=84  Identities=29%  Similarity=0.463  Sum_probs=78.2

Q ss_pred             CCCCHHHHHHHHHHHHhhcC---CCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHH
Q 033233           41 DHLTKEEVIDRVLSVVKCFP---KVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYI  117 (124)
Q Consensus        41 ~~M~~~ei~~~l~~il~e~l---~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I  117 (124)
                      ..|+++++.++|++++++.+   +++.++|+++++|.+++|||||++++|+..||++||++|+.+++.++.|++++++||
T Consensus         2 ~~m~~~~i~~~v~~~i~~~l~~~~~~~~~i~~d~~l~~dlglDSl~~vel~~~lE~~fgi~i~~~~~~~~~Tv~~l~~~i   81 (88)
T 2l4b_A            2 GSMVSEEIKAQVMESVIGCLKLNDEQKQILSGTTNLAKDFNLDSLDFVDLIMSLEERFSLEISDEDAQKLETVDDICRYI   81 (88)
T ss_dssp             CSSSCHHHHHHHHHHHHHHHTCCHHHHHSCCTTSCTTTTTTCCHHHHHHHHHHHHHHTTCCCCHHHHHTCCSHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHhhCCCCHhhCCCCCchhhccCCcHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHH
Confidence            36899999999999999998   888889999999977999999999999999999999999999999999999999999


Q ss_pred             HcCCCCC
Q 033233          118 YNHPMAS  124 (124)
Q Consensus       118 ~~~~~a~  124 (124)
                      .++++++
T Consensus        82 ~~~~~~~   88 (88)
T 2l4b_A           82 ASKSSDA   88 (88)
T ss_dssp             HHHSSCC
T ss_pred             HHhhccC
Confidence            9887653

>2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A*

Probab=99.78  E-value=1.9e-18  Score=110.02  Aligned_cols=80  Identities=33%  Similarity=0.535  Sum_probs=76.4

Q ss_pred             CCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           42 HLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        42 ~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      .|+++++.+++++++++.++++.++++++++|..++|+|||++++++..||++||++++.+++.++.|+++++++|.+++
T Consensus         2 ~m~~~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~dlG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~   81 (82)
T 2cnr_A            2 AATQEEIVAGLAEIVNEIAGIPVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDDVKNLKTVGDATKYILDHQ   81 (82)
T ss_dssp             CCCHHHHHHHHHHHHHHHSCCCTTTCCTTSBTTTTSCCCHHHHHHHHHHHHGGGTBCCCGGGGGTCSBHHHHHHHHHHSB
T ss_pred             CCCHHHHHHHHHHHHHHHhCCCHHHCCCCcchhhccCCChHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHHHc
Confidence            48999999999999999999999999999999669999999999999999999999999999999999999999998775

>2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str}

Probab=99.77  E-value=1.1e-18  Score=111.27  Aligned_cols=80  Identities=35%  Similarity=0.543  Sum_probs=75.8

Q ss_pred             CCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           42 HLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        42 ~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      .|+++++.+++++++++.+++++++++++++|..++|+|||++++++..||++||++++.+++.++.|++++++|+.+++
T Consensus         1 Mm~~~~i~~~l~~ii~~~l~~~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~   80 (81)
T 2lol_A            1 MSTTDKIEQKVIEMVAEKLNKDKAIITTDSRFIEDLKADSLDTVELMMAIEVEYGIDIPDDEATKIKTVSDVIKYIKERQ   80 (81)
T ss_dssp             CCSHHHHHHHHHHHHHHHSCCCTTTCCTTCCHHHHTTCCHHHHHHHHHHHHHHHCCCCCGGGGGGSSSHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHHHHHCCChhhCCCCCcHHHhcCCcHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence            47899999999999999999999999999999669999999999999999999999999999999999999999998764

>4dxe_H ACP, acyl carrier protein; acyl-carrier-protein synthase, type II acid synthesis pathway; 2.51A {Staphylococcus aureus}

Probab=99.77  E-value=3.6e-19  Score=119.74  Aligned_cols=80  Identities=40%  Similarity=0.569  Sum_probs=71.3

Q ss_pred             CCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           42 HLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        42 ~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      .|++.++.++|+++|++.+++++++|+++++|.++||||||++++|+..||++|||+|+.+++.++.|++++++||.++.
T Consensus        21 ~m~~mei~~~l~~iiae~l~~~~~~I~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~Tv~dl~~~I~~~~  100 (101)
T 4dxe_H           21 QSNAMENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKFINSLE  100 (101)
T ss_dssp             ---CTTHHHHHHHHHHHTTCCCGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCBHHHHHHHHC---
T ss_pred             hcCHHHHHHHHHHHHHHHHCcChhhCCCCCcchhhcCCCcHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHcc
Confidence            34455899999999999999999999999999779999999999999999999999999999999999999999998764

>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi}

Probab=99.77  E-value=4.1e-19  Score=114.18  Aligned_cols=81  Identities=27%  Similarity=0.457  Sum_probs=76.5

Q ss_pred             CCCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcC
Q 033233           41 DHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH  120 (124)
Q Consensus        41 ~~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~  120 (124)
                      +.|+++++.+++++++++.++++.++++++++|..++|+|||++++++..||++||++++.+++.++.|++++++||.++
T Consensus         3 ~~m~~~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~   82 (84)
T 2kwl_A            3 GSMDNDEIFSKVRSIISEQLDKKEDEITTDSRFVEDLNADSLDIYELLYLLEEAFDDKIPENEANEFETVGDVVNFIKKR   82 (84)
T ss_dssp             CCSTHHHHHHHHHHHHHHHHCCCGGGCCTTTHHHHTSSSCHHHHHHHHHHHHHHHTCCTTTTGGGGCSSHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHhCCCcccCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHCCCHHHHHHHHHHH
Confidence            36999999999999999999999999999999966999999999999999999999999999999999999999999875


Q ss_pred             C
Q 033233          121 P  121 (124)
Q Consensus       121 ~  121 (124)
                      +
T Consensus        83 ~   83 (84)
T 2kwl_A           83 K   83 (84)
T ss_dssp             H
T ss_pred             c
Confidence            4

>1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A

Probab=99.77  E-value=2e-19  Score=114.68  Aligned_cols=80  Identities=38%  Similarity=0.603  Sum_probs=71.6

Q ss_pred             CCCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcC
Q 033233           41 DHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH  120 (124)
Q Consensus        41 ~~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~  120 (124)
                      ++|+++++.+++++++++.++++.++++++++|..++|+|||++++++..||++||++++.+++.++.|++++++||.++
T Consensus         1 ~~m~~~~i~~~l~~~l~~~l~~~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~   80 (81)
T 1f80_D            1 GPLGSADTLERVTKIIVDRLGVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQNQ   80 (81)
T ss_dssp             ----CCHHHHHHHHHHHHHSSCCSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHCC--
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCHHhCCCccchHHHcCCcHHHHHHHHHHHHHHhCCccCHHHHHHCCCHHHHHHHHHhh
Confidence            46899999999999999999999999999999955999999999999999999999999999999999999999999765

>3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A*

Probab=99.77  E-value=4.1e-19  Score=113.70  Aligned_cols=79  Identities=34%  Similarity=0.577  Sum_probs=74.4

Q ss_pred             CHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCCC
Q 033233           44 TKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHPM  122 (124)
Q Consensus        44 ~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~~  122 (124)
                      +++++.++|++++++.+++++++++++++|.++||||||++++++..||++||++|+.+++.++.|++++++||.++++
T Consensus         2 ~~~~i~~~l~~ii~~~l~~~~~~i~~d~~l~~dlg~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~   80 (81)
T 3gzm_A            2 SLKSTFDDIKKIISKQLSVEEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYIEKNNK   80 (81)
T ss_dssp             CHHHHHHHHHHHHHHHHTCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC-
T ss_pred             CHHHHHHHHHHHHHHHhCcCHHHCCCCCcchhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHHhc
Confidence            4679999999999999999999999999996699999999999999999999999999999999999999999988764

>3ce7_A Specific mitochodrial acyl carrier protein; malaria, mitochondrial, ACP, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.64A {Toxoplasma}

Probab=99.76  E-value=1.9e-18  Score=117.24  Aligned_cols=78  Identities=23%  Similarity=0.405  Sum_probs=74.4

Q ss_pred             CCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcc-----cccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHH
Q 033233           43 LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQ-----KDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYI  117 (124)
Q Consensus        43 M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~-----~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I  117 (124)
                      |+.++|.++|+++|++.++ +.++|+++++|.     ++||||||++++|+..||++|||+|+++++.++.|++++++||
T Consensus        15 ~~~~~i~~~i~~il~e~l~-~~~~i~~d~~l~~~~~~~dLglDSL~~veli~~lE~~fgi~i~~~~~~~~~Tv~~l~~~i   93 (107)
T 3ce7_A           15 TDINAVTNYIVGMCQKFLQ-KGEKVTPSSKLEELRTREDRLWDCLDTVEFVLDVEEIFDVTVPDEVADNFQTLQEIADFV   93 (107)
T ss_dssp             TCHHHHHHHHHHHHHTTBC-TTCCCCTTSCGGGSBBTTSSBCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhC-CccccCCCCcccccCcccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHhcCCHHHHHHHH
Confidence            7899999999999999999 889999999996     7999999999999999999999999999999999999999999


Q ss_pred             HcCC
Q 033233          118 YNHP  121 (124)
Q Consensus       118 ~~~~  121 (124)
                      .+++
T Consensus        94 ~~~~   97 (107)
T 3ce7_A           94 VSER   97 (107)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora}

Probab=99.75  E-value=1.1e-18  Score=117.63  Aligned_cols=76  Identities=13%  Similarity=0.114  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccC--ccHHHHHHHHHcCCC
Q 033233           46 EEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRI--DACNLAIEYIYNHPM  122 (124)
Q Consensus        46 ~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~--~Tv~dlv~~I~~~~~  122 (124)
                      .+|.++|++++++.++++.+.++++++|.+|||+|||++++|++.+|++||++||.+ ..++  .||+++++||.++.+
T Consensus        13 ~~I~~~V~~ilaE~lev~~e~Vtpda~l~dDLglDSLd~VeLVm~lE~~fGi~ipd~-~e~~~~~TV~d~vdyI~~~~~   90 (102)
T 2l9f_A           13 TGALELVRHLVAERAELPVEVLRDDSRFLDDLHMSSITVGQLVNEAARAMGLSAVAM-PTNFATATVREMAEALEARER   90 (102)
T ss_dssp             CCHHHHHHHHHHHHTTSCSSSCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCSTTSS-CSCCTTCBHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCHHHcCCCcchhhhcCCcHHHHHHHHHHHHHHhCCCCCcc-HHHHHHccHHHHHHHHHHhhc
Confidence            479999999999999999999999999999999999999999999999999999887 6667  999999999987653

>1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1

Probab=99.74  E-value=2.5e-18  Score=115.41  Aligned_cols=81  Identities=27%  Similarity=0.484  Sum_probs=76.5

Q ss_pred             CCCCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHc
Q 033233           40 DDHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYN  119 (124)
Q Consensus        40 ~~~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~  119 (124)
                      --.|.+.++.++|+++|++.+++++++|+++++| .+||||||++++|+..||++||++||.+++.++.|++++++||.+
T Consensus        10 ~~~~~~~~i~~~l~~ila~~l~v~~~~I~~d~~L-~dLGlDSL~~veL~~~LE~~fgi~i~~~~l~~~~TV~~L~~~I~~   88 (100)
T 1vku_A           10 HHHMERKKLIAKFVEIASEKMGKDLETVDEENTF-KELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIK   88 (100)
T ss_dssp             CCTTHHHHHHHHHHHHHHHTTCCCCCSCCTTSBT-TTTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHH
T ss_pred             hhhccHHHHHHHHHHHHHHHHCCCHHHCCCCCCH-HHcCCchHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHH
Confidence            3468899999999999999999999999999999 799999999999999999999999999999999999999999987


Q ss_pred             CC
Q 033233          120 HP  121 (124)
Q Consensus       120 ~~  121 (124)
                      ++
T Consensus        89 ~~   90 (100)
T 1vku_A           89 KL   90 (100)
T ss_dssp             HH
T ss_pred             Hh
Confidence            64

>1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1

Probab=99.74  E-value=5.3e-18  Score=115.67  Aligned_cols=80  Identities=29%  Similarity=0.569  Sum_probs=76.2

Q ss_pred             CCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           42 HLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        42 ~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      .|+++++.++|++++++.+|++.++|+++++|.+++|+|||++++++..||++||++|+.+++.++.|++++++||.++.
T Consensus         2 ~m~~~~i~~~l~~il~~~l~~~~~~i~~d~~l~~dlG~DSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~   81 (115)
T 1klp_A            2 PVTQEEIIAGIAEIIEEVTGIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQKLE   81 (115)
T ss_dssp             CCCHHHHHHHHHHHHHHHTCCCTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHhCcCHHhCCCCCchhhccCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHHH
Confidence            58999999999999999999999999999999669999999999999999999999999999999999999999997654

>1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus}

Probab=99.74  E-value=2.8e-18  Score=108.64  Aligned_cols=79  Identities=43%  Similarity=0.682  Sum_probs=74.9

Q ss_pred             CCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           43 LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        43 M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      |+++++.+++++++++.++++.++++++++|..++|+|||++++++..||++||++++.+++.++.|++++++++.+++
T Consensus         1 M~~~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~   79 (80)
T 1x3o_A            1 MTEQEIFEKVKAVIADKLQVEPEKVTLEARFIEDLGADSLDTVELIMGLEDEFGLEISDEEAEKIRTVKDAVEYIKAKL   79 (80)
T ss_dssp             CCHHHHHHHHHHHHHHHHTCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCBHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhCCCHHHCCCcCcHHhhcCccHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHHc
Confidence            7899999999999999999998999999999559999999999999999999999999999999999999999998754

>2cgq_A Acyl carrier protein ACPA; RV0033, protein transport, phosphopant; 1.83A {Mycobacterium tuberculosis}

Probab=99.73  E-value=7.9e-18  Score=115.45  Aligned_cols=76  Identities=20%  Similarity=0.301  Sum_probs=70.6

Q ss_pred             CCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           42 HLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        42 ~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      .| ++++.++|+++|++.++     |+++++|.++||||||++++|+..||++|||+|+++++.++.||+++++||.+++
T Consensus        26 ~M-~~ei~~~v~~il~e~l~-----I~~d~~l~~dLGlDSLd~veLi~~LEe~FgI~I~~e~l~~~~TV~dlv~~I~~~l   99 (113)
T 2cgq_A           26 AM-EEAINATIQRILRTDRG-----ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYTSVAVWF   99 (113)
T ss_dssp             CH-HHHHHHHHHHHHTCCSC-----CCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCBHHHHHHHHHTTC
T ss_pred             cc-HHHHHHHHHHHHHHHhC-----CCCCCchhhhcCCCHHHHHHHHHHHHHHhCCCcCHHHHHhCCCHHHHHHHHHHHH
Confidence            57 89999999999999987     8999999779999999999999999999999999999999999999999999876


Q ss_pred             CC
Q 033233          122 MA  123 (124)
Q Consensus       122 ~a  123 (124)
                      ++
T Consensus       100 ~~  101 (113)
T 2cgq_A          100 PE  101 (113)
T ss_dssp             --
T ss_pred             hc
Confidence            53

>2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C*

Probab=99.72  E-value=6.7e-18  Score=107.85  Aligned_cols=78  Identities=40%  Similarity=0.510  Sum_probs=72.4

Q ss_pred             CHHHHHHHHHHHHhhcCCCCCC-CCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCCC
Q 033233           44 TKEEVIDRVLSVVKCFPKVDPS-QVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHPM  122 (124)
Q Consensus        44 ~~~ei~~~l~~il~e~l~v~~~-~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~~  122 (124)
                      +++++.++|++++++.++++.+ +++++++|. ++|+|||++++++..||++||++|+.+++.++.|++++++||.++++
T Consensus         1 ~~~~i~~~l~~i~~~~l~~~~~~~i~~~~~l~-dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~   79 (82)
T 2ava_A            1 AKKETIDKVSDIVKEKLALGADVVVTADSEFS-KLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIEGLLE   79 (82)
T ss_dssp             CCHHHHHHHHHHHHHHTTCSSSSCCCSSCCSC-CCTTCCSCHHHHHHHHHHHTTCCCCGGGSSSCCSHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhCCCcccccCCCCchh-hcCCCHHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHHHHHh
Confidence            3568999999999999999887 899999997 99999999999999999999999999999999999999999987643

>2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii}

Probab=99.72  E-value=4.8e-18  Score=108.81  Aligned_cols=78  Identities=41%  Similarity=0.624  Sum_probs=73.7

Q ss_pred             CHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           44 TKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        44 ~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      +++++.+++++++++.++++.++++++++|..++|+|||++++++..||++||++|+.+++.++.|++++++|+.+++
T Consensus         4 ~~~~i~~~l~~ii~~~l~~~~~~i~~d~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~   81 (82)
T 2qnw_A            4 DDRPLLERVKDVVADQLGVDRARINPESNFIKDLDADSLDSVELVMAFEEKFGVSIPDEEASKIATVQDALSYIEKAK   81 (82)
T ss_dssp             CSHHHHHHHHHHHHHHHCCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHHHHHCCCHhhCCCccchhhccCCcHHHHHHHHHHHHHHHCCcCCHHHHHHcCCHHHHHHHHHHhc
Confidence            567899999999999999999999999999669999999999999999999999999999999999999999998764

>2lki_A Putative uncharacterized protein; helical bundle, acyl carrier, phosphopantetheine, fatty acid biosynthesis, lipid synthesis, PSI-biology; HET: PNS; NMR {Nitrosomonas europaea}

Probab=99.71  E-value=1.2e-17  Score=113.03  Aligned_cols=76  Identities=17%  Similarity=0.258  Sum_probs=69.9

Q ss_pred             HHHHHHHHHHhhcCCCC--CCCCCCCCCcccccCC-ChhhHHHHHHHHHHHhCCccChhh--cccCccHHHHHHHHHcCC
Q 033233           47 EVIDRVLSVVKCFPKVD--PSQVTPDVHFQKDLGL-DSLDNVEIVMALEEEFKLEIPDKE--AVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        47 ei~~~l~~il~e~l~v~--~~~I~~dt~l~~dLGl-DSL~~veli~~lEe~fgI~I~~~~--l~~~~Tv~dlv~~I~~~~  121 (124)
                      ++.++|+++|++.++++  +++|+++++|.+++|+ |||++++|+..||++|||+|++++  ..++.|++++++||.+++
T Consensus        24 ~i~~~i~~il~e~l~~~~~~~~i~~d~~L~~dLGl~DSL~~veLi~~lE~~FgI~I~~eel~~~~~~Tv~~l~~~I~~~~  103 (105)
T 2lki_A           24 QHLEAVRNILGDVLNLGERKHTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDEISAQTFETLGSLALFVEHKL  103 (105)
T ss_dssp             CTHHHHHHHHHHHTTCTTGGGTCCTTSBCBTTBTTCCHHHHHHHHHHHHHHHTSCCCGGGCCGGGGSBHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCcccccCCCCCchhhhcCcccHHHHHHHHHHHHHHhCCCcCHHHhhHHhcCCHHHHHHHHHHHh
Confidence            57889999999999988  7899999999878999 999999999999999999999999  458999999999998876


Q ss_pred             C
Q 033233          122 M  122 (124)
Q Consensus       122 ~  122 (124)
                      +
T Consensus       104 ~  104 (105)
T 2lki_A          104 S  104 (105)
T ss_dssp             T
T ss_pred             c
Confidence            4

>1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A*

Probab=99.71  E-value=4e-18  Score=109.95  Aligned_cols=78  Identities=23%  Similarity=0.285  Sum_probs=70.5

Q ss_pred             CCHHHHHHHHHHHHhhcCCCCCC----CCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHH
Q 033233           43 LTKEEVIDRVLSVVKCFPKVDPS----QVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIY  118 (124)
Q Consensus        43 M~~~ei~~~l~~il~e~l~v~~~----~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~  118 (124)
                      |+++.+.+.|++++++.++++.+    +++++++| .++|+|||++++++..||++||++||.+++.++.|++++++||.
T Consensus         1 M~~~~~~~~l~~il~~~l~~~~~~~~~~i~~~~~l-~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~   79 (86)
T 1af8_A            1 MATLLTTDDLRRALVECAGETDGTDLSGDFLDLRF-EDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLIN   79 (86)
T ss_dssp             CCCSSCHHHHHHHHHTTCCCCSCCCTTTCSSTTST-TTTTCCTTTHHHHHHHHTTTTCSCCCTTTTTTCCSHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHhCCCcccccccCCCCCCh-hhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHH
Confidence            44455678899999999999876    78999999 59999999999999999999999999999999999999999998


Q ss_pred             cCC
Q 033233          119 NHP  121 (124)
Q Consensus       119 ~~~  121 (124)
                      +++
T Consensus        80 ~~~   82 (86)
T 1af8_A           80 GAL   82 (86)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            764

>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A

Probab=99.71  E-value=1.9e-17  Score=106.17  Aligned_cols=76  Identities=22%  Similarity=0.363  Sum_probs=69.6

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccC-CChhhHHHHHHHHHHHhCCccChhhcc--cCccHHHHHHHHHcCC
Q 033233           45 KEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLG-LDSLDNVEIVMALEEEFKLEIPDKEAV--RIDACNLAIEYIYNHP  121 (124)
Q Consensus        45 ~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLG-lDSL~~veli~~lEe~fgI~I~~~~l~--~~~Tv~dlv~~I~~~~  121 (124)
                      ++++.++|++++++.++.+..+++++++|. ++| +|||++++|++.||++|||+||++++.  ++.|++++++||.+++
T Consensus         2 ~~~i~~~i~~il~~~~~~~~~~i~~d~~l~-~~g~lDSl~~velv~~lE~~fgi~i~~~~~~~~~~~Tv~~l~~~i~~~~   80 (80)
T 1dv5_A            2 DEAIKNGVLDILADLTGSDDVKKNLDLNLF-ETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQAQ   80 (80)
T ss_dssp             CHHHHHHHHHHHHHHHTSSSTTTCSSCCSS-TTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHhCCCcccCCCCcchh-hccCcChHHHHHHHHHHHHHhCCcCCHHHcCHHhcCCHHHHHHHHHHcC
Confidence            468999999999999998888899999997 556 999999999999999999999999986  8999999999998763

>1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A

Probab=99.70  E-value=3.1e-17  Score=103.66  Aligned_cols=75  Identities=45%  Similarity=0.675  Sum_probs=71.0

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           47 EVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        47 ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      ++.+++++++++.+++++++++++++|.+++|+|||++++++..||++||++++.+++.++.|++++++|+.++.
T Consensus         3 ~i~~~l~~~~~~~l~~~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~   77 (78)
T 1l0i_A            3 TIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKMTTVQAAIDYINGHQ   77 (78)
T ss_dssp             CHHHHHHHHHHHHHTCCGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHhCCCHHHCCCCcchhhhcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence            578999999999999998999999999669999999999999999999999999999999999999999998765

>2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa}

Probab=99.51  E-value=2.2e-18  Score=116.15  Aligned_cols=80  Identities=24%  Similarity=0.388  Sum_probs=75.1

Q ss_pred             CCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           42 HLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        42 ~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      .|+++ +.++|+++|++.+++++++|+++++| .+||+|||++++|+..||++||++|+.+++.++.|++++++||.+++
T Consensus        22 ~M~~e-i~~~l~~ila~~l~i~~~~I~~d~~l-~dLGlDSL~~veL~~~lE~~fgi~i~~~~l~~~~TV~~l~~~I~~~~   99 (103)
T 2lte_A           22 HMPND-MEDHLLTVLSVASGVPKEEISRDSRM-EDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDELFQLVEKHR   99 (103)
Confidence            47766 99999999999999999999999999 69999999999999999999999999999999999999999999876


Q ss_pred             CC
Q 033233          122 MA  123 (124)
Q Consensus       122 ~a  123 (124)
                      ++
T Consensus       100 ~~  101 (103)
T 2lte_A          100 AA  101 (103)
Confidence            54

>2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1

Probab=99.67  E-value=3.7e-17  Score=110.34  Aligned_cols=84  Identities=14%  Similarity=0.273  Sum_probs=65.2

Q ss_pred             ccCCCCCCCHHHHHHHHHHHHhhcCC--CCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcc--cCccHH
Q 033233           36 MSSHDDHLTKEEVIDRVLSVVKCFPK--VDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAV--RIDACN  111 (124)
Q Consensus        36 ~~~~~~~M~~~ei~~~l~~il~e~l~--v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~--~~~Tv~  111 (124)
                      .+.+.+.++++++.++|+++|++.++  ++.++|+++++|. ++|+|||++++|+..||++|||+||++++.  ++.|++
T Consensus        11 ~~~~~~~~~~~~i~~~i~~il~~~l~~~v~~~~i~~d~~l~-dlGlDSL~~veLv~~lE~~fgI~i~~~~l~~~~~~tv~   89 (105)
T 2jq4_A           11 SSGRENLYFQGHMNATIREILAKFGQLPTPVDTIADEADLY-AAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIK   89 (105)
T ss_dssp             ------------CHHHHHHHHHHTSCCSSCGGGCCTTSCGG-GGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHH
T ss_pred             ccCCCCCCCHHHHHHHHHHHHHHHhccCCCcccCCCCCCHh-hcCCCHHHHHHHHHHHHHHHCCCcCHHHhhhhhcCCHH
Confidence            45677888899999999999999865  4578999999997 999999999999999999999999999976  788998


Q ss_pred             HHHHHHHcC
Q 033233          112 LAIEYIYNH  120 (124)
Q Consensus       112 dlv~~I~~~  120 (124)
                      +++++|...
T Consensus        90 ~l~~~v~~~   98 (105)
T 2jq4_A           90 AIEDTVKLI   98 (105)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            888888654

>2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A

Probab=99.67  E-value=6.1e-17  Score=108.28  Aligned_cols=75  Identities=24%  Similarity=0.399  Sum_probs=69.4

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhh------cccCcc-----HHHHHH
Q 033233           47 EVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKE------AVRIDA-----CNLAIE  115 (124)
Q Consensus        47 ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~------l~~~~T-----v~dlv~  115 (124)
                      ++.++|++++++.++++.++|+++++|.++||||||++++|+..||++|||+|+.++      +.++.|     ++++++
T Consensus         3 ~i~~~v~~ii~~~l~~~~~~i~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~~~~~~~T~~~~Tv~~l~~   82 (101)
T 2kw2_A            3 STFDRVATIIAETCDIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKNLAA   82 (101)
T ss_dssp             CHHHHHHHHHHHHHCCCGGGCCTTCBCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSSCHHHHHBHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCHhhCCCCcchHHhcCCCHHHHHHHHHHHHHHHCCccCHHHhcchhhhhhccCCCcCcHHHHHH
Confidence            688999999999999999999999999779999999999999999999999999987      568888     999999


Q ss_pred             HHHcCC
Q 033233          116 YIYNHP  121 (124)
Q Consensus       116 ~I~~~~  121 (124)
                      ||.+++
T Consensus        83 ~i~~~~   88 (101)
T 2kw2_A           83 RIDELV   88 (101)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            998654

>1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1

Probab=99.66  E-value=3e-17  Score=105.15  Aligned_cols=76  Identities=21%  Similarity=0.338  Sum_probs=70.0

Q ss_pred             HHHHHHHHHHhhcCCCCCC-CCC--CCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCCCC
Q 033233           47 EVIDRVLSVVKCFPKVDPS-QVT--PDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHPMA  123 (124)
Q Consensus        47 ei~~~l~~il~e~l~v~~~-~I~--~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~~a  123 (124)
                      .+.+.|++++++.++++.+ +++  ++++| .++|+|||++++++..||++||++||.+++.++.|++++++||.+++++
T Consensus         4 ~~~~~l~~~l~~~l~~~~~~~i~~~~~~~~-~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~~   82 (83)
T 1or5_A            4 LTVDDLKKLLAETAGEDDSVDLAGELDTPF-VDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTTPAT   82 (83)
T ss_dssp             SCHHHHHHHHHHHSCCCSSCCGGGCSSSCH-HHHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTTCCSC
T ss_pred             HHHHHHHHHHHHHhCCCcccccCCCCCCcH-HHhCCCHHHHHHHHHHHHHHHCCccCHHHHhccCCHHHHHHHHHHHhcC
Confidence            4678899999999999877 898  99998 5999999999999999999999999999999999999999999888764

>2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A

Probab=99.62  E-value=5.6e-16  Score=97.09  Aligned_cols=75  Identities=39%  Similarity=0.634  Sum_probs=69.2

Q ss_pred             HHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCCC
Q 033233           48 VIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHPM  122 (124)
Q Consensus        48 i~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~~  122 (124)
                      +.+.+++++++.++++.++++++++|..++|+|||.+++++..+|++||++++..++.++.|++++++++.++.+
T Consensus         2 i~~~l~~~~~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~~gi~i~~~~~~~~~tv~~l~~~i~~~~~   76 (77)
T 2ehs_A            2 LEERVKEIIAEQLGVEKEKITPEAKFVEDLGADSLDVVELIMAFEEEFGIEIPDEDAEKIQTVGDVINYLKEKVG   76 (77)
T ss_dssp             HHHHHHHHHHHHHCCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHhCCChhhCCCccchhhccCCCHHHHHHHHHHHHHHhCCccCHHHHHHcCCHHHHHHHHHHHhc
Confidence            678899999999999988999999995599999999999999999999999999999999999999999987653

>2l3v_A ACP, acyl carrier protein; structural genomi seattle structural genomics center for infectious disease, lipid binding protein; NMR {Brucella melitensis}

Probab=99.62  E-value=5.8e-17  Score=102.51  Aligned_cols=75  Identities=43%  Similarity=0.588  Sum_probs=71.2

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           47 EVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        47 ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      ++.+++++++++.++++.++++++++|..++|+|||++++++..||++||++++..++.++.|++++++++.+++
T Consensus         4 ~i~~~l~~~~~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~   78 (79)
T 2l3v_A            4 DTAERVKKIVVEHLGVDADKVTEGASFIDDLGADSLDTVELVMAFEEEFGVEIPDDAAETILTVGDAVKFIDKAS   78 (79)
T ss_dssp             HHHHHHHHHHHHHTCCCSTTCCTTCCHHHHTCCCSSSSSSTTTTHHHHTTCCCCHHHHTTCSSSSTTHHHHHHTC
T ss_pred             HHHHHHHHHHHHHhCCCHhhCCCCCccccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence            789999999999999999999999999559999999999999999999999999999999999999999998775

>1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1

Probab=99.61  E-value=8.3e-16  Score=101.67  Aligned_cols=79  Identities=20%  Similarity=0.240  Sum_probs=66.2

Q ss_pred             CCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           42 HLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        42 ~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      .|+.+++.+.+.+.+....+.++++++++++| .+||+|||++++|+..||++|||+||.+++.++.|++++++||.+++
T Consensus         3 ~~t~~~l~~ii~~~l~~~~~~~~~~i~~d~~~-~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~   81 (95)
T 1nq4_A            3 LLTLSDLLTLLRECAGEEESIDLGGDVEDVAF-DALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNASL   81 (95)
T ss_dssp             CCCHHHHHHHHHHHHTCSSTTCSCSCCSSSCH-HHHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHccccccccccCCCCCCh-hhhCCCHHHHHHHHHHHHHHHCCccCHHHHHcCCCHHHHHHHHHHHH
Confidence            46666766666666554444455689999999 49999999999999999999999999999999999999999997653

>1fh1_A NODF, nodulation protein F; ROOT nodulation factor, protein backbone fold, lipid binding protein; NMR {Rhizobium leguminosarum} SCOP: i.11.1.1

Probab=99.57  E-value=1.3e-16  Score=104.78  Aligned_cols=76  Identities=18%  Similarity=0.313  Sum_probs=33.7

Q ss_pred             HHHHHHHHHHhhcCC--------CCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccC---hhhcccCccHHHHHH
Q 033233           47 EVIDRVLSVVKCFPK--------VDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIP---DKEAVRIDACNLAIE  115 (124)
Q Consensus        47 ei~~~l~~il~e~l~--------v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~---~~~l~~~~Tv~dlv~  115 (124)
                      ++.++|+++|++.++        +++++++++++| .+||||||++++|+..||++|||+|+   ..++.++.|++++++
T Consensus         4 ~i~~~i~~ii~~~~~~~~~~~~~~~~~~i~~d~~l-~dlg~DSl~~vel~~~lE~~fgi~i~~~~~~~~~~~~Tv~~l~~   82 (92)
T 1fh1_A            4 QLTLEIISAINKLVKAENGERTSVALGEITTDTEL-TSLGIDSLGLADVLWDLEQLYGIKIEMNTADAWSNLNNIGDVVE   82 (92)
T ss_dssp             -CHHHHHHHHHHHC-----------------------------CTTTTHHHHHHHC-----------------CTTTSTH
T ss_pred             HHHHHHHHHHHHHHHhccccccCCCHhhCCCCCCH-hhcCCChHHHHHHHHHHHHHhCCccCCccHhHHhhcCCHHHHHH
Confidence            567778888887776        445589999999 69999999999999999999999999   677899999999999


Q ss_pred             HHHcCCCC
Q 033233          116 YIYNHPMA  123 (124)
Q Consensus       116 ~I~~~~~a  123 (124)
                      ||.+++++
T Consensus        83 ~i~~~~~~   90 (92)
T 1fh1_A           83 AVRGLLTK   90 (92)
T ss_dssp             HHHC----
T ss_pred             HHHHHhhc
Confidence            99988764

>2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A

Probab=99.55  E-value=1.5e-14  Score=92.45  Aligned_cols=80  Identities=13%  Similarity=0.117  Sum_probs=74.9

Q ss_pred             CCCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcC
Q 033233           41 DHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH  120 (124)
Q Consensus        41 ~~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~  120 (124)
                      ..++.+++.+.+.+++++.++++.+.++++.+|. ++|+|||.++++...|+++||++++..++.+..|++++++++.++
T Consensus         8 ~~~~~~~~~~~l~~~~~~~l~~~~~~i~~~~~~~-~lG~DSl~~~~l~~~l~~~~~~~i~~~~~~~~~ti~~la~~l~~~   86 (88)
T 2afd_A            8 QPASVEDIQSWLIDQFAQQLDVDPDDIDMEESFD-NYDLNSSKALILLGRLEKWLGKELNPVLIFNYPTIAQLAKRLGEL   86 (88)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHTSCGGGCCTTSCGG-GTTCCSTHHHHHHHHHHHHTTSCCCGGGTTTCCSHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHCcCHHHcCCCCCHH-HcCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHH
Confidence            4567889999999999999999888999999996 999999999999999999999999999999999999999999876


Q ss_pred             C
Q 033233          121 P  121 (124)
Q Consensus       121 ~  121 (124)
                      +
T Consensus        87 ~   87 (88)
T 2afd_A           87 Y   87 (88)
T ss_dssp             T
T ss_pred             h
Confidence            4

>2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus}

Probab=99.50  E-value=3.9e-14  Score=91.22  Aligned_cols=78  Identities=21%  Similarity=0.327  Sum_probs=72.2

Q ss_pred             CHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccCh--hhcccCccHHHHHHHHHcCC
Q 033233           44 TKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPD--KEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        44 ~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~--~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      ..+++.+.+++++++.++++.++++++.+|. ++|+|||.++++...|+++||++++.  .++..+.|+++++++|.+..
T Consensus         8 ~~~~~~~~l~~~~~~~l~~~~~~i~~~~~~~-~lG~DSL~~~~l~~~l~~~~g~~l~~~~~~l~~~~Tv~~la~~l~~~~   86 (89)
T 2kr5_A            8 VSNEKLDAVMRVVSEESGIALEELTDDSNFA-DMGIDSLSSMVIGSRFREDLGLDLGPEFSLFIDCTTVRALKDFMLGSG   86 (89)
T ss_dssp             CCHHHHHHHHHHHHHHHCCCGGGCCTTCBHH-HHTCCHHHHHHHHHHHHHTTCCCCCSSCCTTTSCCBHHHHHHHHHTTT
T ss_pred             ccHHHHHHHHHHHHHHHCcCHHHCCCCCCHH-HcCccHHHHHHHHHHHHHHHCCCCCchHHHHHcCCCHHHHHHHHHHhC
Confidence            4568999999999999999989999999995 99999999999999999999999999  88999999999999998754


Q ss_pred             C
Q 033233          122 M  122 (124)
Q Consensus       122 ~  122 (124)
                      .
T Consensus        87 ~   87 (89)
T 2kr5_A           87 D   87 (89)
T ss_dssp             C
T ss_pred             c
Confidence            3

>2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A*

Probab=99.50  E-value=4.4e-14  Score=92.23  Aligned_cols=80  Identities=19%  Similarity=0.245  Sum_probs=74.6

Q ss_pred             CCCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcC
Q 033233           41 DHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH  120 (124)
Q Consensus        41 ~~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~  120 (124)
                      ..++.+++.+.+.+++++.++++.++++++.+|. ++|+|||.++++...|+++||++++..++....|+++++++|.++
T Consensus        15 ~~~~~~~~~~~l~~~~~~~l~~~~~~i~~~~~~~-~lG~DSl~~~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~   93 (99)
T 2liu_A           15 NQVNLSEIKQVLKQQLAEALYTEESEIAEDQKFV-DLGLDSIVGVEWTTTINQTYNLNLKATKLYDYPTLLELSGYIAQI   93 (99)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTTSCGGGCCSSSCHH-HHTCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCSHHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHHHHHHHCcCHHHcCCCCCHH-HhCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHH
Confidence            3468899999999999999999989999999996 999999999999999999999999999999999999999999765


Q ss_pred             C
Q 033233          121 P  121 (124)
Q Consensus       121 ~  121 (124)
                      +
T Consensus        94 ~   94 (99)
T 2liu_A           94 L   94 (99)
T ss_dssp             H
T ss_pred             h
Confidence            3

>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}

Probab=99.46  E-value=8.7e-14  Score=102.94  Aligned_cols=85  Identities=14%  Similarity=0.277  Sum_probs=75.3

Q ss_pred             cCCCCCCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHH
Q 033233           37 SSHDDHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEY  116 (124)
Q Consensus        37 ~~~~~~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~  116 (124)
                      ....+.|+++++.+.|++++++.++++.++|+++.+|. +||+|||.+++|...|+++||++++..++.++.|++++++|
T Consensus        16 ~~~~~~~~~~~i~~~l~~~~a~~l~~~~~~i~~~~~f~-~lG~DSl~~~el~~~l~~~~g~~l~~~~~~~~~Ti~~la~~   94 (212)
T 2l22_A           16 PRGSHMVADDECAQFLRQSLAAMLYCEPGQIRDGSRFL-ELGLDSVIAAQWIREINKHYQLKIPADGIYTYPVFKAFTQW   94 (212)
T ss_dssp             ------CCTTHHHHHHHHHHHHHTTCCTTSCCTTCBHH-HHTCCHHHHHHHHHHHHHHTTCCCCTTHHHHCCBHHHHHHH
T ss_pred             ccCCCCCCHHHHHHHHHHHHHHHHCcCHHHcCCCCCHH-HhCCcHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHH
Confidence            34556688899999999999999999999999999996 99999999999999999999999999999999999999999


Q ss_pred             HHcCCC
Q 033233          117 IYNHPM  122 (124)
Q Consensus       117 I~~~~~  122 (124)
                      |.++..
T Consensus        95 l~~~~~  100 (212)
T 2l22_A           95 VGTQLQ  100 (212)
T ss_dssp             HHTTSC
T ss_pred             HHHhcc
Confidence            987653

>2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A

Probab=99.41  E-value=1.7e-13  Score=89.12  Aligned_cols=77  Identities=19%  Similarity=0.274  Sum_probs=70.4

Q ss_pred             CHHHHHHHHHHHHhhcCC-CCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           44 TKEEVIDRVLSVVKCFPK-VDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        44 ~~~ei~~~l~~il~e~l~-v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      .++.+.+.+.+++++.++ .+.+.++++.+|. ++|+|||..+++...++++||++++..++.+..|++++++++.+++
T Consensus        17 ~~~~~~~~l~~~~~~~l~~~~~~~i~~~~~f~-~lG~DSL~a~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~l   94 (95)
T 2ju1_A           17 RTAELVRLVRTSTATVLGHDDPKAVRATTPFK-ELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFLDAEL   94 (95)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCGGGCCSSSCHH-HHTCSSHHHHHHHHHHGGGTSSCCCTTHHHHCSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCChhhCCCCCCHH-HcCCcHHHHHHHHHHHHHHHCCCCChhHHhcCCCHHHHHHHHHHHc
Confidence            345788899999999999 7788999999996 9999999999999999999999999999999999999999997653

>2cg5_B Fatty acid synthase; transferase-hydrolase complex, transferase/hydrolase (comple fatty acid biosynthesis, phosphopantetheine transferase; HET: COA; 2.7A {Homo sapiens} PDB: 2png_A

Probab=99.39  E-value=1e-12  Score=86.78  Aligned_cols=70  Identities=24%  Similarity=0.309  Sum_probs=62.4

Q ss_pred             HHHHHHHhhcCCCC-CCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           50 DRVLSVVKCFPKVD-PSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        50 ~~l~~il~e~l~v~-~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      ..|++.+++++|++ ++.|+++.+|. +||+|||+.+||...||++||+++|..++..+ |+++|++++....
T Consensus         9 ~~v~~~va~iLg~~~~~~I~~~~~l~-dLG~DSL~aVELr~~Le~~fgi~lp~~~l~~~-Ti~~La~~v~~~~   79 (91)
T 2cg5_B            9 RDLVEAVAHILGIRDLAAVNLDSSLA-DLGLDALMSVEVRQTLERELNLVLSVREVRQL-TLRKLQELSSKAD   79 (91)
T ss_dssp             TTHHHHHHHHTTCCSCTTSCTTSBTT-TTTCCHHHHHHHHHHHHHHHCCCCCHHHHHTC-BHHHHHHHHHCC-
T ss_pred             HHHHHHHHHHHCCCchhhCCCCCCHH-HhCCcchHHHHHHHHHHHHHCCCCCHHHHHhC-CHHHHHHHHhccc
Confidence            35788888899986 58999999995 99999999999999999999999999998785 9999999987553

>4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus}

Probab=99.35  E-value=1.6e-12  Score=84.95  Aligned_cols=75  Identities=13%  Similarity=0.137  Sum_probs=69.1

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCCC
Q 033233           45 KEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHPM  122 (124)
Q Consensus        45 ~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~~  122 (124)
                      .+++.+.|.+++++++|+  +.++.+.+|+ ++|.|||.+++++..|+++||++++..++....|+++++++|.+...
T Consensus        14 ~~~~e~~l~~i~~~vL~~--~~i~~~~~Ff-~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~pTi~~la~~l~~~~~   88 (93)
T 4i4d_A           14 RRALERDIAAIWAETLGR--DSVGPHEDFA-ALGGNSIHAIXITNRVEELVDAELSIRVLLETRTVAGMTDHVHATLT   88 (93)
T ss_dssp             HHHHHHHHHHHHHHHHTC--SCCCTTCCTT-TTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHHCSHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHHHHhCC--CCCCCCCCHH-HcCCcHHHHHHHHHHHHHHhCCCCCHHHHHcCCCHHHHHHHHHHHcc
Confidence            557889999999999998  4699999998 99999999999999999999999999999999999999999987653

>1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A

Probab=99.32  E-value=3.4e-12  Score=83.38  Aligned_cols=73  Identities=15%  Similarity=0.230  Sum_probs=66.4

Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           46 EEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        46 ~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      .++.+.|.++++++++++  .++.+.+|+ ++|.|||.+++++..|+++||++++..++....|++++++++.+..
T Consensus        13 ~~~e~~l~~i~~~vL~~~--~i~~~~~Ff-~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~~Ti~~la~~i~~~~   85 (91)
T 1dny_A           13 NAVESKLAEIWERVLGVS--GIGILDNFF-QIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVATRS   85 (91)
T ss_dssp             SHHHHHHHHHHHHHHTCS--SCCSSCCTT-SSCCSSHHHHHHHHHHHHHCCCCCCHHHHHHSCSHHHHHHHHHC--
T ss_pred             CHHHHHHHHHHHHHhCCC--CCCCCCCHH-HcCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHhh
Confidence            467889999999999984  799999998 9999999999999999999999999999999999999999997653

>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}

Probab=99.31  E-value=3.4e-12  Score=94.34  Aligned_cols=78  Identities=15%  Similarity=0.276  Sum_probs=73.2

Q ss_pred             CCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           43 LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        43 M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      .+++++.+.|++++++.++++.++|+++.+|. ++|+|||.+++++..|+++||++++..++.++.|++++++||.++.
T Consensus       126 ~~~~~i~~~l~~~~~~~l~~~~~~i~~~~~f~-~lG~DSl~a~el~~~l~~~~g~~l~~~~l~~~~Ti~~La~~l~~~~  203 (212)
T 2l22_A          126 AQRESIQDYLKQSLGELLFLDPGQLRSGAQFL-DLGMDSVTGTQWMRGVSRHFSIQLAADAIYTWPTLKSLADEVDRRV  203 (212)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCSSSCCSSCCGG-GGCSSSHHHHHHHHHHHHHTTCCCCGGGGGGCCSHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHCCChhhCCCCCCHH-HhCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHHHHh
Confidence            45788999999999999999999999999997 9999999999999999999999999999999999999999997654

>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A

Probab=98.88  E-value=3.3e-09  Score=81.97  Aligned_cols=73  Identities=11%  Similarity=0.103  Sum_probs=66.2

Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           46 EEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        46 ~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      +++.+.|.+++++++|++.  +..+.+|+ ++|.|||.+++++..|+++||++++..++....|+++++++|.+..
T Consensus        10 ~~~e~~l~~~~~~~l~~~~--i~~~~~ff-~lGgdSl~a~~l~~~l~~~~~~~~~~~~~~~~~t~~~la~~~~~~~   82 (329)
T 3tej_A           10 AGSETIIAAAFSSLLGCDV--QDADADFF-ALGGHXLLAMKLAAQLSRQVARQVTPGQVMVASTVAKLATIIDAEE   82 (329)
T ss_dssp             TTHHHHHHHHHHHHHTC-C--CSTTCBTT-TTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHCCBHHHHHHHHHSCT
T ss_pred             CHHHHHHHHHHHHHhCCCC--CCCCCCHH-HcCCcHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHhhc
Confidence            3677889999999999864  89999997 9999999999999999999999999999999999999999998654

>2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.87  E-value=2.6e-09  Score=72.71  Aligned_cols=73  Identities=21%  Similarity=0.216  Sum_probs=66.9

Q ss_pred             HHHHHHHHHHHHhhcCC-CCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhC-CccChhhcccCccHHHHHHHHHcC
Q 033233           45 KEEVIDRVLSVVKCFPK-VDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFK-LEIPDKEAVRIDACNLAIEYIYNH  120 (124)
Q Consensus        45 ~~ei~~~l~~il~e~l~-v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fg-I~I~~~~l~~~~Tv~dlv~~I~~~  120 (124)
                      +.++...|.++..++++ +  ..|..+++|+ ++|-|||.++.++..|+++|| ++++..++....|+++++++|.++
T Consensus        23 ~~~~E~~La~iW~~vL~~~--~~i~~~ddFF-~lGG~SLla~rLv~~ir~~~g~v~l~l~~Lf~~pTl~~lA~~l~~~   97 (110)
T 2cq8_A           23 ELVTAEAVRSVWQRILPKV--LEVEDSTDFF-KSGAASVDVVRLVEEVKELCDGLELENEDVYMASTFGDFIQLLVRK   97 (110)
T ss_dssp             HHHHHHHHHHHHHHHCSSC--SCCCTTCBHH-HHHCCTTHHHHHHHHHHHHHTSCCCCHHHHHHCCBHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHhCCC--CCCCCCCCHH-hcCChHHHHHHHHHHHHHHcCCCCcCHHHHHhCCCHHHHHHHHHHH
Confidence            46688999999999998 4  4699999998 999999999999999999999 999999999999999999998754

>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}

Probab=98.58  E-value=9.7e-08  Score=77.29  Aligned_cols=73  Identities=19%  Similarity=0.225  Sum_probs=66.7

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcC
Q 033233           45 KEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH  120 (124)
Q Consensus        45 ~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~  120 (124)
                      ..++...|.+++++++|++  .|..+.+|+ +||.|||.+++++..++++||++++..++....|++++++++.+.
T Consensus         8 ~~~~e~~l~~iw~~vL~~~--~i~~~d~ff-~lGgdSl~a~~l~~~~~~~~g~~l~~~~i~~~~ti~~la~~~~~~   80 (520)
T 2jgp_A            8 RSVWEARLAQVWEQVLNVP--QVGALDDFF-ALGGHSLRAMRVLSSMHNEYQVDIPLRILFEKPTIQELAAFIEET   80 (520)
T ss_dssp             CSHHHHHHHHHHHHHHTCS--CCCTTCBTT-TTTCCHHHHHHHHHHHHHHHCBCCCHHHHHHSCBHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHhCCC--CCCCCccHH-HhcccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHhh
Confidence            3467788999999999985  689999998 999999999999999999999999999999999999999999754

>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}

Probab=98.57  E-value=1.2e-07  Score=73.06  Aligned_cols=67  Identities=12%  Similarity=0.072  Sum_probs=61.6

Q ss_pred             HHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHc
Q 033233           50 DRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYN  119 (124)
Q Consensus        50 ~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~  119 (124)
                      +++++.+++.+ ++.+++.++.+|. ++|+||+.++.++..+++. |++++..++.+..|++++.+++.+
T Consensus       218 dwlr~~va~~L-~~~~~i~~~~nL~-~lGlDSi~~m~l~~~~~~~-g~~~~~~~l~~~ptl~~~~~~l~~  284 (287)
T 2fq1_A          218 AALREVILPLL-DESDEPFDDDNLI-DYGLDSVRMMALAARWRKV-HGDIDFVMLAKNPTIDAWWKLLSR  284 (287)
T ss_dssp             HHHHHHHGGGC-CCSSCCCTTSCSG-GGTCCTTHHHHHHHHHTTT-CTTCCHHHHHTSCSHHHHHHHHHC
T ss_pred             HHHHHHHHHHh-CCHhhcCCCCCHH-HhCccHHHHHHHHHHHHHc-CCCCCHHHHHhCccHHHHHHHHHh
Confidence            35777888888 8888999999997 9999999999999999998 999999999999999999999983

>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}

Probab=98.34  E-value=5.7e-07  Score=80.90  Aligned_cols=73  Identities=15%  Similarity=0.193  Sum_probs=66.8

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcC
Q 033233           45 KEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH  120 (124)
Q Consensus        45 ~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~  120 (124)
                      ..++.+.+.+++++++|+  +.|..+.+|+ ++|.|||.+++++..|+++||++++..++....|+++|++++...
T Consensus       970 ~~~~e~~l~~~~~~vL~~--~~i~~~~~ff-~lGg~Sl~a~~l~~~l~~~~g~~l~~~~~~~~~ti~~la~~~~~~ 1042 (1304)
T 2vsq_A          970 RNEMEETIAQIWSEVLGR--KQIGIHDDFF-ALGGHALKAMTAASRIKKELGIDLPVKLLFEAPTIAGISAYLKNG 1042 (1304)
T ss_dssp             SSHHHHHHHHHHHHHHTC--SCCCTTCCTT-TTTCCHHHHHHHHHHSSSTTSCCCCSSCTTTCCSHHHHHHHHHHT
T ss_pred             CChHHHHHHHHHHHHcCC--CccCCCCCHH-HhCCChHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHhc
Confidence            457788999999999997  4589999998 999999999999999999999999999999999999999999754

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=98.25  E-value=1.2e-07  Score=77.21  Aligned_cols=72  Identities=22%  Similarity=0.345  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcC
Q 033233           45 KEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH  120 (124)
Q Consensus        45 ~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~  120 (124)
                      ..++...|.++++++++++  .|..+.+|+ ++|.|||.+++++..|++ ||+.++..++....|+++++++|.+.
T Consensus        43 ~~~~e~~l~~~w~~~l~~~--~i~~~~~ff-~lGg~Sl~a~~l~~~~~~-~~~~~~~~~~~~~~t~~~la~~~~~~  114 (508)
T 4f6l_B           43 SNEIEQTFVDVFGEVLKQN--DVGVDDDFF-ELGGNSLEAMLVVSHLKR-FGHHISMQTLYQYKTVRQIVNYMYQN  114 (508)
T ss_dssp             ----------------------------------------------------------------------------
T ss_pred             CCHHHHHHHHHHHHHhCCC--CCCCCCChH-HcCchHHHHHHHHHHHHH-cCCCccHHHHhcCCcHHHHHHHHHhh
Confidence            4577888999999999985  689999998 999999999999999986 99999999999999999999999764

>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}

Probab=98.09  E-value=6.1e-06  Score=68.58  Aligned_cols=70  Identities=11%  Similarity=0.056  Sum_probs=59.2

Q ss_pred             HHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           49 IDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        49 ~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      ...+.+++.+.++. .+.+..+.+|+ ++|.|||.+++|+..|++ ++++++..++.+..|+++++++|.+++
T Consensus       547 ~~~l~~~~~~~l~~-~~~~~~~d~Ff-~lGgdSl~a~~l~~~l~~-~~~~~~~~~~~~~pti~~la~~l~~~~  616 (617)
T 3rg2_A          547 KAALREVILPLLDE-SDEPFDDDNLI-DYGLDSVRMMALAARWRK-VHGDIDFVMLAKNPTIDAWWKLLSREV  616 (617)
T ss_dssp             HHHHHHHHGGGSCT-TCCCCTTSCGG-GGTCCHHHHHHHHHHHHT-TSTTCCHHHHHHSCCHHHHHHHHCC--
T ss_pred             HHHHHHHHHHHhcc-CCCCCCCCChh-hcCccHHHHHHHHHHHHH-hcCCCCHHHHhcCCCHHHHHHHHHhhc
Confidence            35677788888763 34678899998 999999999999999987 788999999999999999999997654

>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*

Probab=98.05  E-value=6.1e-07  Score=75.21  Aligned_cols=73  Identities=10%  Similarity=-0.017  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHH-HhCCccChhhcccCccHHHHHHHHHcC
Q 033233           45 KEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEE-EFKLEIPDKEAVRIDACNLAIEYIYNH  120 (124)
Q Consensus        45 ~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe-~fgI~I~~~~l~~~~Tv~dlv~~I~~~  120 (124)
                      .++....+.++++++++++  .+..+.+|+ ++|.|||.+++++..|++ .||++++..++....|+.+|+++|.+.
T Consensus       522 ~~~~e~~l~~iw~~vL~~~--~~~~~d~Ff-~lGGdSl~a~~l~~~l~~~~~~~~l~~~~~f~~pti~~la~~l~~~  595 (620)
T 4dg8_A          522 LDPDQRGCAQLWSELLGCE--VGAADQDFF-LCGGNSLLALQLVALCQSAGAGANLGLADLQANSRLDQFSRLLRSH  595 (620)
T ss_dssp             -----------------------------------------------------------------------------
T ss_pred             CCHHHHHHHHHHHHHhCCC--CCCCCCChh-hccCcHHHHHHHHHHHHhhCCCCCcCHHHHhcCCCHHHHHHHHHhc
Confidence            3456778899999999984  478888998 999999999999999999 899999999999999999999999764

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=97.28  E-value=3.9e-05  Score=73.51  Aligned_cols=69  Identities=26%  Similarity=0.312  Sum_probs=0.0

Q ss_pred             HHHHHHHHhhcCCCC-CCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHc
Q 033233           49 IDRVLSVVKCFPKVD-PSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYN  119 (124)
Q Consensus        49 ~~~l~~il~e~l~v~-~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~  119 (124)
                      .+.+.++++++++++ .+.|+.+.+|. +||+|||..+||...|+++||+.++..++.+ .|+..+.+++..
T Consensus      2125 ~~~l~~~~a~vL~~~~~~~i~~~~~~~-~lG~DSL~avelr~~i~~~~~~~l~~~~i~~-~t~~~la~~~~~ 2194 (2512)
T 2vz8_A         2125 QKDLVKAVAHILGIRDVASINPDSTLV-DLGLDSLMGVEVRQILEREHDLVLSMREVRQ-LSLRKLQELSSK 2194 (2512)
T ss_dssp             ------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHhCCCcccccCCCCchH-HhCcchHHHHHHHHHHHHHhCCcccHHHHHh-hhHHHHHHHHhh
Confidence            456888889999986 57899999997 9999999999999999999999999988866 688888777643

>2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens}

Probab=91.59  E-value=0.033  Score=41.92  Aligned_cols=37  Identities=5%  Similarity=-0.123  Sum_probs=8.7

Q ss_pred             CCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHH
Q 033233           78 GLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAI  114 (124)
Q Consensus        78 GlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv  114 (124)
                      |.|||.+++++..|+++||++++..++....|+..++
T Consensus         1 GGdSL~a~~l~~rl~~~~g~~l~~~~lf~~pt~~~l~   37 (316)
T 2px6_A            1 GSHNLACPTPKEDGLAQQQTQLNLRSLLVNPEGPTLM   37 (316)
T ss_dssp             -------------------------CCCCCTTSCSEE
T ss_pred             CCchHHHHHHHHHHHHHHhhccchhhhhcCCCcCeeE
Confidence            7899999999999999999999999988877776554

>1dd4_C 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix- bundle, five-helix- bundle, alpha-beta structure; HET: TBR; 2.40A {Thermotoga maritima} SCOP: a.108.1.1

Probab=80.37  E-value=1.6  Score=23.87  Aligned_cols=21  Identities=29%  Similarity=0.425  Sum_probs=17.2

Q ss_pred             CCChhhHHHHHHHHHHHhCCc
Q 033233           78 GLDSLDNVEIVMALEEEFKLE   98 (124)
Q Consensus        78 GlDSL~~veli~~lEe~fgI~   98 (124)
                      ++.=+.+.+|+..+|++|||.
T Consensus        12 ~lTvlE~~eLvk~leekfGVs   32 (40)
T 1dd4_C           12 KLTVSELAELVKKLEDKFGVT   32 (40)
T ss_dssp             TSCHHHHHHHHHHHHHHTCCC
T ss_pred             hCcHHHHHHHHHHHHHHHCCC
Confidence            344467889999999999997

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	124
d1t8ka_	77	a.28.1.1 (A:) Acyl carrier protein {Escherichia co	2e-16
d1f80d_	74	a.28.1.1 (D:) Acyl carrier protein {Bacillus subti	8e-16
d1dv5a_	80	a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactob	2e-13
d1klpa_	115	a.28.1.1 (A:) Acyl carrier protein {Mycobacterium	2e-13
d1vkua_	85	a.28.1.1 (A:) Acyl carrier protein {Thermotoga mar	1e-11
d1or5a_	82	a.28.1.1 (A:) Frenolicin polyketide synthase acyl	9e-08
d1nq4a_	95	a.28.1.1 (A:) Oxytetracycline polyketide synthase	1e-07
d2af8a_	86	a.28.1.1 (A:) Actinorhodin polyketide synthase acy	8e-07
d2pnga1	76	a.28.1.1 (A:1-76) Type I fatty acid synthase ACP d	5e-06
d2jq4a1	83	a.28.1.1 (A:1-83) Hypothetical protein Atu2571 {Ag	1e-05

>d1t8ka_ a.28.1.1 (A:) Acyl carrier protein {Escherichia coli [TaxId: 562]} Length = 77

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Acyl carrier protein
species: Escherichia coli [TaxId: 562]

 Score = 66.3 bits (162), Expect = 2e-16
 Identities = 35/74 (47%), Positives = 46/74 (62%)

Query: 47  EVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVR 106
            + +RV  ++     V   +VT +  F +DLG DSLD VE+VMALEEEF  EIPD+EA +
Sbjct: 2   TIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEK 61

Query: 107 IDACNLAIEYIYNH 120
           I     AI+YI  H
Sbjct: 62  ITTVQAAIDYINGH 75

>d1f80d_ a.28.1.1 (D:) Acyl carrier protein {Bacillus subtilis [TaxId: 1423]} Length = 74

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Acyl carrier protein
species: Bacillus subtilis [TaxId: 1423]

 Score = 64.8 bits (158), Expect = 8e-16
 Identities = 28/71 (39%), Positives = 44/71 (61%)

Query: 47  EVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVR 106
           + ++RV  ++     VD + V  +  F++DLG D LD VE+VM LE+EF +EI D++A +
Sbjct: 3   DTLERVTKIIVDRLGVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEK 62

Query: 107 IDACNLAIEYI 117
           I     A+ YI
Sbjct: 63  IATVGDAVNYI 73

>d1dv5a_ a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactobacillus casei [TaxId: 1582]} Length = 80

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: apo-D-alanyl carrier protein
domain: apo-D-alanyl carrier protein
species: Lactobacillus casei [TaxId: 1582]

 Score = 59.1 bits (143), Expect = 2e-13
 Identities = 15/75 (20%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 45  KEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEA 104
            E + + VL ++      D  +   D++  +   LDS+  V++++ L+ +F ++ P  E 
Sbjct: 2   DEAIKNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEF 61

Query: 105 VRIDACNLA--IEYI 117
            R +       I  +
Sbjct: 62  DRKEWDTPNKIIAKV 76

>d1klpa_ a.28.1.1 (A:) Acyl carrier protein {Mycobacterium tuberculosis [TaxId: 1773]} Length = 115

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Acyl carrier protein
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 59.8 bits (144), Expect = 2e-13
 Identities = 23/80 (28%), Positives = 46/80 (57%)

Query: 43  LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
           +T+EE+I  +  +++    ++PS++TP+  F  DL +DSL  VEI +  E+++ ++IPD+
Sbjct: 3   VTQEEIIAGIAEIIEEVTGIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDE 62

Query: 103 EAVRIDACNLAIEYIYNHPM 122
           +   +      + YI     
Sbjct: 63  DLAGLRTVGDVVAYIQKLEE 82

>d1vkua_ a.28.1.1 (A:) Acyl carrier protein {Thermotoga maritima [TaxId: 2336]} Length = 85

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Acyl carrier protein
species: Thermotoga maritima [TaxId: 2336]

 Score = 54.3 bits (130), Expect = 1e-11
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 1/79 (1%)

Query: 42  HLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPD 101
           H+ ++++I + + +       D   V  +  F K+LG DS+D +++VM  E+EF L I D
Sbjct: 3   HMERKKLIAKFVEIASEKMGKDLETVDEENTF-KELGFDSIDVIDLVMFFEDEFALRIED 61

Query: 102 KEAVRIDACNLAIEYIYNH 120
           +E  +I      I+ +   
Sbjct: 62  EEISKIRKVKDLIDIVIKK 80

>d1or5a_ a.28.1.1 (A:) Frenolicin polyketide synthase acyl carrier protein, Fren ACP {Streptomyces roseofulvus [TaxId: 33902]} Length = 82

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Frenolicin polyketide synthase acyl carrier protein, Fren ACP
species: Streptomyces roseofulvus [TaxId: 33902]

 Score = 44.2 bits (104), Expect = 9e-08
 Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 2/82 (2%)

Query: 43  LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
           LT +++   +         VD +    D  F  DLG DSL  +E    L++ + + + D+
Sbjct: 3   LTVDDLKKLLAETAGEDDSVDLA-GELDTPF-VDLGYDSLALLETAAVLQQRYGIALTDE 60

Query: 103 EAVRIDACNLAIEYIYNHPMAS 124
              R+      ++ +   P  +
Sbjct: 61  TVGRLGTPRELLDEVNTTPATA 82

>d1nq4a_ a.28.1.1 (A:) Oxytetracycline polyketide synthase acyl carrier {Streptomyces rimosus [TaxId: 1927]} Length = 95

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Oxytetracycline polyketide synthase acyl carrier
species: Streptomyces rimosus [TaxId: 1927]

 Score = 44.2 bits (104), Expect = 1e-07
 Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 1/78 (1%)

Query: 43  LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
           LT  +++  +         +D      DV F   LG DSL  +  V  +E ++ +++ D 
Sbjct: 4   LTLSDLLTLLRECAGEEESIDLGGDVEDVAFD-ALGYDSLALLNTVGRIERDYGVQLGDD 62

Query: 103 EAVRIDACNLAIEYIYNH 120
              +       IE     
Sbjct: 63  AVEKATTPRALIEMTNAS 80

>d2af8a_ a.28.1.1 (A:) Actinorhodin polyketide synthase acyl carrier protein, ACT ACP {Streptomyces coelicolor, A3(2) [TaxId: 1902]} Length = 86

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Actinorhodin polyketide synthase acyl carrier protein, ACT ACP
species: Streptomyces coelicolor, A3(2) [TaxId: 1902]

 Score = 41.9 bits (98), Expect = 8e-07
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)

Query: 43  LTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDK 102
           LT +++   ++         D S    D+ F+ D+G DSL  +E    LE  + + IPD 
Sbjct: 5   LTTDDLRRALVECAGETDGTDLSGDFLDLRFE-DIGYDSLALMETAARLESRYGVSIPDD 63

Query: 103 EAVRIDACNLAIEYI 117
            A R+D     ++ I
Sbjct: 64  VAGRVDTPRELLDLI 78

>d2pnga1 a.28.1.1 (A:1-76) Type I fatty acid synthase ACP domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 76

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Type I fatty acid synthase ACP domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.4 bits (92), Expect = 5e-06
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%)

Query: 44  TKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKE 103
            + +++  V  ++      D + +  D     DLGLDSL  VE+   LE E  L +P +E
Sbjct: 5   AQRDLVKAVAHILGIR---DLAGINLDSSL-ADLGLDSLMGVEVRQILEREHDLVLPIRE 60

>d2jq4a1 a.28.1.1 (A:1-83) Hypothetical protein Atu2571 {Agrobacterium tumefaciens [TaxId: 358]} Length = 83

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Hypothetical protein Atu2571
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 38.8 bits (90), Expect = 1e-05
 Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 7/84 (8%)

Query: 46  EEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAV 105
              I  +L+     P      +  +       GL S  +V++++ +EE F +E PD    
Sbjct: 2   NATIREILAKFGQLP-TPVDTIADEADLY-AAGLSSFASVQLMLGIEEAFDIEFPDNLLN 59

Query: 106 R-----IDACNLAIEYIYNHPMAS 124
           R     I A    ++ I +   A+
Sbjct: 60  RKSFASIKAIEDTVKLILDGKEAA 83

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	124
d1t8ka_	77	Acyl carrier protein {Escherichia coli [TaxId: 562	99.82
d1vkua_	85	Acyl carrier protein {Thermotoga maritima [TaxId:	99.77
d1f80d_	74	Acyl carrier protein {Bacillus subtilis [TaxId: 14	99.77
d1klpa_	115	Acyl carrier protein {Mycobacterium tuberculosis [	99.75
d1dv5a_	80	apo-D-alanyl carrier protein {Lactobacillus casei	99.7
d2af8a_	86	Actinorhodin polyketide synthase acyl carrier prot	99.67
d1nq4a_	95	Oxytetracycline polyketide synthase acyl carrier {	99.66
d1or5a_	82	Frenolicin polyketide synthase acyl carrier protei	99.56
d2jq4a1	83	Hypothetical protein Atu2571 {Agrobacterium tumefa	99.54
d2gdwa1	76	Peptidyl carrier protein (PCP), thioester domain {	99.31
d2pnga1	76	Type I fatty acid synthase ACP domain {Rat (Rattus	99.25
d2gyc31	47	Ribosomal protein L7/12, oligomerisation (N-termin	90.4
d1v32a_	101	Hypothetical protein AT5G08430 (rafl09-47-k03) {Th	80.51

>d1t8ka_ a.28.1.1 (A:) Acyl carrier protein {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Acyl carrier protein
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=1.3e-20  Score=119.41  Aligned_cols=76  Identities=46%  Similarity=0.670  Sum_probs=72.5

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCCC
Q 033233           47 EVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHPM  122 (124)
Q Consensus        47 ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~~  122 (124)
                      +|.++|++++++.+|+++++|+++++|.++||||||++++++..+|++||++||++++.++.|++++++||.++++
T Consensus         2 ~I~~~v~~iia~~l~i~~~~i~~~~~l~~dLg~DSl~~~el~~~iE~~f~i~i~~~~~~~~~Tv~dlv~~i~~~~A   77 (77)
T d1t8ka_           2 TIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA   77 (77)
T ss_dssp             CHHHHHHHHHHHHHTCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHTCC
T ss_pred             cHHHHHHHHHHHHHCCCHHHcCCCCcchhccccchhHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHHccC
Confidence            4789999999999999999999999998789999999999999999999999999999999999999999998864

>d1vkua_ a.28.1.1 (A:) Acyl carrier protein {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Acyl carrier protein
species: Thermotoga maritima [TaxId: 2336]

Probab=99.77  E-value=2.7e-19  Score=114.43  Aligned_cols=80  Identities=26%  Similarity=0.471  Sum_probs=76.3

Q ss_pred             CCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           42 HLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        42 ~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      .|+++++.++|++++++.+|+++++|+++++|. ++|+||+++++++..||++||++|+.+++.++.|++++++||.+++
T Consensus         3 ~m~~~~i~~~l~~iv~~~l~~~~~~i~~~~~~~-dlG~DSl~~v~l~~~ie~~f~i~i~~~~~~~~~Tv~~l~~~i~~~~   81 (85)
T d1vkua_           3 HMERKKLIAKFVEIASEKMGKDLETVDEENTFK-ELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKKL   81 (85)
T ss_dssp             TTHHHHHHHHHHHHHHHTTCCCCCSCCTTSBTT-TTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCHH-HhcCcchHHHHHHHHHHHHccCCCCHHHHHHcCCHHHHHHHHHHHH
Confidence            489999999999999999999999999999995 9999999999999999999999999999999999999999998765


Q ss_pred             C
Q 033233          122 M  122 (124)
Q Consensus       122 ~  122 (124)
                      +
T Consensus        82 ~   82 (85)
T d1vkua_          82 E   82 (85)
T ss_dssp             H
T ss_pred             h
Confidence            3

>d1f80d_ a.28.1.1 (D:) Acyl carrier protein {Bacillus subtilis [TaxId: 1423]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Acyl carrier protein
species: Bacillus subtilis [TaxId: 1423]

Probab=99.77  E-value=1.5e-19  Score=113.53  Aligned_cols=72  Identities=39%  Similarity=0.637  Sum_probs=69.3

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHH
Q 033233           47 EVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIY  118 (124)
Q Consensus        47 ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~  118 (124)
                      ++.++|++++++.+++++++++++++|.++||+|||++++++..||++||++||.+++.++.|++++++||+
T Consensus         3 dv~~~v~~iia~~l~~~~~~i~~~~~~~~DlG~DSl~~vel~~~le~~f~i~i~~~~~~~~~Tv~~l~~~ie   74 (74)
T d1f80d_           3 DTLERVTKIIVDRLGVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQ   74 (74)
T ss_dssp             HHHHHHHHHHHHHSSCCSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHCcCHHHcCCCccHHHhcCccHhHHHHHHHHHHHHhCCCCCHHHHhcCCCHHHHHHHHC
Confidence            789999999999999999999999999878999999999999999999999999999999999999999973

>d1klpa_ a.28.1.1 (A:) Acyl carrier protein {Mycobacterium tuberculosis [TaxId: 1773]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Acyl carrier protein
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.75  E-value=1.5e-18  Score=116.81  Aligned_cols=80  Identities=29%  Similarity=0.569  Sum_probs=76.6

Q ss_pred             CCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           42 HLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        42 ~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      +|+++++.+.|++++++.+|+++++|+++++|.++|||||++.++|+..||++||+.|+..++.++.|+++|++||.+..
T Consensus         2 ~~t~~~i~~~l~~iv~~~l~~~~~~i~~~~~~~~dlG~DSl~~~~l~~~le~~f~i~i~~~~~~~~~Tv~~l~~~l~~~~   81 (115)
T d1klpa_           2 PVTQEEIIAGIAEIIEEVTGIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQKLE   81 (115)
T ss_dssp             CCCHHHHHHHHHHHHHHHTCCCTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCccccCcccchhhhcccchhHHHHHHHHHHHHHCCCCCHHHHHhCccHHHHHHHHHHHh
Confidence            68999999999999999999999999999999878999999999999999999999999999999999999999997653

>d1dv5a_ a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactobacillus casei [TaxId: 1582]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: apo-D-alanyl carrier protein
domain: apo-D-alanyl carrier protein
species: Lactobacillus casei [TaxId: 1582]

Probab=99.70  E-value=1.3e-17  Score=105.98  Aligned_cols=76  Identities=21%  Similarity=0.296  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcc--cCccHHHHHHHHHcC
Q 033233           45 KEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAV--RIDACNLAIEYIYNH  120 (124)
Q Consensus        45 ~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~--~~~Tv~dlv~~I~~~  120 (124)
                      .++|.++|++++++.+|.+...++++++|.+.+|+|||++++++..||++||++||..++.  ++.|++++++||.+.
T Consensus         2 ~e~I~~~v~~il~~~l~~~~~~i~~d~~l~e~gglDSl~~vel~~~ie~~fgi~i~~~~l~~~~~~Tv~~l~~~v~~l   79 (80)
T d1dv5a_           2 DEAIKNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQA   79 (80)
T ss_dssp             CHHHHHHHHHHHHHHHTSSSTTTCSSCCSSTTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHHHhccchhhcCCCccccccCCCCHHHHHHHHHHHHHHHCCCCCHHHhhHHhCCCHHHHHHHHHHc
Confidence            3689999999999999999999999999986678999999999999999999999999974  899999999999865

>d2af8a_ a.28.1.1 (A:) Actinorhodin polyketide synthase acyl carrier protein, ACT ACP {Streptomyces coelicolor, A3(2) [TaxId: 1902]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Actinorhodin polyketide synthase acyl carrier protein, ACT ACP
species: Streptomyces coelicolor, A3(2) [TaxId: 1902]

Probab=99.67  E-value=4.6e-17  Score=104.74  Aligned_cols=81  Identities=26%  Similarity=0.335  Sum_probs=76.2

Q ss_pred             CCCCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHc
Q 033233           40 DDHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYN  119 (124)
Q Consensus        40 ~~~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~  119 (124)
                      ...|+.+++.+.+++.+.+.+|+++++++.+++|. ++|+||++.++++..|+++||+++|...+.++.|++++++||.+
T Consensus         2 ~t~~t~d~l~~~l~e~~~~~~g~~~~~i~~d~~f~-dlG~DSl~~~~l~~~l~~~~g~~l~~~~~~~~~Tv~~l~~~i~~   80 (86)
T d2af8a_           2 ATLLTTDDLRRALVECAGETDGTDLSGDFLDLRFE-DIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLING   80 (86)
T ss_dssp             CCCCCHHHHHHHHHHTTCCCSCCCCSSCSCSSSHH-HHTCSSHHHHHHHHHHHHHHTCCCCCSTTTTCCCHHHHHHHHHH
T ss_pred             CccccHHHHHHHHHHHHccccCCCccccccCCCHH-HcCCCHHHHHHHHHHHHHHHccCcCHHHHHcCCCHHHHHHHHHH
Confidence            35678999999999999999999999999999995 99999999999999999999999999999999999999999987


Q ss_pred             CC
Q 033233          120 HP  121 (124)
Q Consensus       120 ~~  121 (124)
                      ++
T Consensus        81 ~l   82 (86)
T d2af8a_          81 AL   82 (86)
T ss_dssp             HH
T ss_pred             Hh
Confidence            65

>d1nq4a_ a.28.1.1 (A:) Oxytetracycline polyketide synthase acyl carrier {Streptomyces rimosus [TaxId: 1927]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Oxytetracycline polyketide synthase acyl carrier
species: Streptomyces rimosus [TaxId: 1927]

Probab=99.66  E-value=6.4e-17  Score=105.90  Aligned_cols=80  Identities=20%  Similarity=0.238  Sum_probs=75.9

Q ss_pred             CCCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcC
Q 033233           41 DHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH  120 (124)
Q Consensus        41 ~~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~  120 (124)
                      ..|+.+++.+.+++++.+.+|++++++..+++|. +||+|||+.++|+..||++||++|+...+.++.|++++++||.++
T Consensus         2 ~~~t~d~l~~~lre~~~~~~~~~~~~i~~d~~f~-dlG~DSl~~~el~~~le~~~gv~l~~~~~~~~~Ti~~l~~~l~~~   80 (95)
T d1nq4a_           2 TLLTLSDLLTLLRECAGEEESIDLGGDVEDVAFD-ALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNAS   80 (95)
T ss_dssp             CCCCHHHHHHHHHHHHTCSSTTCSCSCCSSSCHH-HHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHHH
T ss_pred             CccCHHHHHHHHHHHHhHHhCCChhhcccCCCHH-HcCCcHHHHHHHHHHHHHHhcCCCCHHHHhcCCCHHHHHHHHHHh
Confidence            3678999999999999999999999999999995 999999999999999999999999999999999999999999765


Q ss_pred             C
Q 033233          121 P  121 (124)
Q Consensus       121 ~  121 (124)
                      +
T Consensus        81 l   81 (95)
T d1nq4a_          81 L   81 (95)
T ss_dssp             H
T ss_pred             c
Confidence            4

>d1or5a_ a.28.1.1 (A:) Frenolicin polyketide synthase acyl carrier protein, Fren ACP {Streptomyces roseofulvus [TaxId: 33902]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Frenolicin polyketide synthase acyl carrier protein, Fren ACP
species: Streptomyces roseofulvus [TaxId: 33902]

Probab=99.56  E-value=1.4e-15  Score=97.05  Aligned_cols=80  Identities=21%  Similarity=0.289  Sum_probs=67.0

Q ss_pred             CCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233           42 HLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP  121 (124)
Q Consensus        42 ~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~  121 (124)
                      .|+.+++.+.|.+.+....+.+. +++.+++|. ++|+|||+.+++...||++||++||...+.++.|++++++||....
T Consensus         2 ~~T~e~l~~il~e~~g~~~~~~~-~~d~d~~f~-dlG~DSl~~~el~~~le~~~g~~l~~~~~~~~~Ti~~l~~~v~~~~   79 (82)
T d1or5a_           2 ALTVDDLKKLLAETAGEDDSVDL-AGELDTPFV-DLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTTP   79 (82)
T ss_dssp             CSCHHHHHHHHHHHSCCCSSCCG-GGCSSSCHH-HHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTTCC
T ss_pred             cccHHHHHHHHHHHhCCCccccc-CCCcCcCHH-HcCCChHhHHHHHHHHHHHHhCcCCHHHHHcCCCHHHHHHHHHhcc
Confidence            46777776666666655555444 367888995 9999999999999999999999999999999999999999999877


Q ss_pred             CC
Q 033233          122 MA  123 (124)
Q Consensus       122 ~a  123 (124)
                      ++
T Consensus        80 a~   81 (82)
T d1or5a_          80 AT   81 (82)
T ss_dssp             SC
T ss_pred             cC
Confidence            64

>d2jq4a1 a.28.1.1 (A:1-83) Hypothetical protein Atu2571 {Agrobacterium tumefaciens [TaxId: 358]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Hypothetical protein Atu2571
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.54  E-value=2.3e-15  Score=95.74  Aligned_cols=72  Identities=15%  Similarity=0.273  Sum_probs=63.7

Q ss_pred             HHHHHHHHhhcC--CCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcc--cCccHHHHHHHHHcCC
Q 033233           49 IDRVLSVVKCFP--KVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAV--RIDACNLAIEYIYNHP  121 (124)
Q Consensus        49 ~~~l~~il~e~l--~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~--~~~Tv~dlv~~I~~~~  121 (124)
                      .++|++++++.+  ++++++|+++++|. ++|+|||++++++..||++||++||.+++.  .+.|+++++++|.+..
T Consensus         2 ~e~i~~il~~~~~l~~~~~~i~~~~~f~-dlG~DSl~~~~l~~~le~~f~v~i~~~~l~~~~~~Ti~~la~~i~~~~   77 (83)
T d2jq4a1           2 NATIREILAKFGQLPTPVDTIADEADLY-AAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVKLIL   77 (83)
T ss_dssp             HHHHHHHHHHTSCCSSCGGGCCTTSCGG-GGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHccCCCHHHcCCCCCHH-HHhCccHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhHHHHHHHHHHHH
Confidence            467888998875  45788999999997 999999999999999999999999999975  5799999999997654

>d2gdwa1 a.28.1.2 (A:8-83) Peptidyl carrier protein (PCP), thioester domain {Bacillus brevis [TaxId: 1393]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Peptidyl carrier domain
domain: Peptidyl carrier protein (PCP), thioester domain
species: Bacillus brevis [TaxId: 1393]

Probab=99.31  E-value=2.6e-12  Score=80.35  Aligned_cols=69  Identities=16%  Similarity=0.232  Sum_probs=65.0

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHH
Q 033233           47 EVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIY  118 (124)
Q Consensus        47 ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~  118 (124)
                      ++.++|.+++++++|++  .++.+++|. ++|.|||.+++++..|+++||+.++..++.+..|+++++++|.
T Consensus         7 ~~E~~l~~i~~~vL~~~--~i~~~~~f~-~lG~dSl~a~~l~~~i~~~~~~~l~~~~l~~~pTi~~LA~~i~   75 (76)
T d2gdwa1           7 AVESKLAEIWERVLGVS--GIGILDNFF-QIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVA   75 (76)
T ss_dssp             HHHHHHHHHHHHHTTSS--CCCTTTTSS-TTTCTTHHHHHHHHHHHHTTSSCCTTHHHHHSCSHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHcCCC--CCCCCCCHH-HcCCChHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHhc
Confidence            68889999999999984  589999997 9999999999999999999999999999999999999999985

>d2pnga1 a.28.1.1 (A:1-76) Type I fatty acid synthase ACP domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Type I fatty acid synthase ACP domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.25  E-value=6.6e-13  Score=83.16  Aligned_cols=67  Identities=28%  Similarity=0.325  Sum_probs=59.6

Q ss_pred             HHHHHHHhhcCCC-CCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHH
Q 033233           50 DRVLSVVKCFPKV-DPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIY  118 (124)
Q Consensus        50 ~~l~~il~e~l~v-~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~  118 (124)
                      +.|.+++++++|+ ++++|+++.+|. ++|+|||.++++...|+++||++++..++.+ .|+++|.++..
T Consensus         7 ~~l~~~va~~Lgi~~~~~I~~~~~f~-~lG~DSl~a~el~~~i~~~~g~~l~~~~l~~-~Ti~~L~el~a   74 (76)
T d2pnga1           7 RDLVKAVAHILGIRDLAGINLDSSLA-DLGLDSLMGVEVRQILEREHDLVLPIREVRQ-LTLRKLQEMSS   74 (76)
T ss_dssp             CCGGGTHHHHHTCSSCTTSCSSSCHH-HHTCSSHHHHHHHHHHHHHTCCCCCHHHHTT-CCSHHHHHTSC
T ss_pred             HHHHHHHHHHhccCCHhhCCCCCCHH-HhCCcHHHHHHHHHHHHHHhCCCCCHHHHHH-hhHHHHHHHHh
Confidence            4467788888998 589999999997 9999999999999999999999999999876 69999988654

>d2gyc31 a.108.1.1 (3:2-48) Ribosomal protein L7/12, oligomerisation (N-terminal) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
superfamily: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
family: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
domain: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
species: Escherichia coli [TaxId: 562]

Probab=90.40  E-value=0.091  Score=28.44  Aligned_cols=19  Identities=37%  Similarity=0.641  Sum_probs=16.7

Q ss_pred             hhhHHHHHHHHHHHhCCcc
Q 033233           81 SLDNVEIVMALEEEFKLEI   99 (124)
Q Consensus        81 SL~~veli~~lEe~fgI~I   99 (124)
                      =+++++|+.++|++||+.-
T Consensus        15 VmdvveLi~amEEKFGVsa   33 (47)
T d2gyc31          15 VMDVVELISAMEEKFGVSA   33 (47)
T ss_dssp             HHHHHHHHHHHHHHTCTTT
T ss_pred             HHHHHHHHHHHHHHhCcch
Confidence            4689999999999999964

>d1v32a_ a.42.1.1 (A:) Hypothetical protein AT5G08430 (rafl09-47-k03) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: SWIB/MDM2 domain
superfamily: SWIB/MDM2 domain
family: SWIB/MDM2 domain
domain: Hypothetical protein AT5G08430 (rafl09-47-k03)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=80.51  E-value=0.56  Score=29.23  Aligned_cols=60  Identities=13%  Similarity=0.175  Sum_probs=49.9

Q ss_pred             CCCCCCCHHHHHHHHHHHHhhc-CC--CCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCC
Q 033233           38 SHDDHLTKEEVIDRVLSVVKCF-PK--VDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKL   97 (124)
Q Consensus        38 ~~~~~M~~~ei~~~l~~il~e~-l~--v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI   97 (124)
                      ..+..|++.++...|++.|.+. +.  .+...|..|..|..-+|.+.+.+.+|...|...|--
T Consensus        30 ~~~~~~sR~eVtk~iw~YIK~nnLqdp~nkr~I~~D~~L~~Lfg~~~v~~f~i~k~l~~H~~~   92 (101)
T d1v32a_          30 DTSEMISRYDVSDTIAKYISKEGLLDPSNKKKVVCDKRLVLLFGTRTIFRMKVYDLLEKHYKE   92 (101)
T ss_dssp             CCSSCCCHHHHHHHHHHHHHHHTCBCSSCTTEEECCSHHHHHTCCSEEETTHHHHHHHHHSCS
T ss_pred             CCcccCCHHHHHHHHHHHHHHhcCCCCccCCEEccCHHHHHHhCCCcccHHHHHHHHHHHcCC
Confidence            3457899999999999999985 32  345568999999888999999999999999888843