Citrus Sinensis ID: 033314

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120--
MLRYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN
ccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHccccHHHHHHHHHHHHHHHHHHHccc
cEEEEcccEcHHHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHccc
mlrykekrwdskkmldsggmpsshsATVSALAVAIGlqegsgspSFAIAVVLACIVMYdasgvrlhaGRQAELLNQIvcefppdhplssvrplrellghtplqvvAGGILGCVVAFLMRNSN
mlrykekrwdskkmldsggmpssHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN
MLRYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN
*****************************ALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLM****
MLRYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFP*********PLRELLGHTPLQVVAGGILGCVVAFLMRNS*
***************************VSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN
MLRYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNS*
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iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooo
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooo
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLRYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query122 2.2.26 [Sep-21-2011]
O32107158 Uncharacterized membrane yes no 0.918 0.708 0.385 2e-16
>sp|O32107|YUID_BACSU Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) GN=yuiD PE=4 SV=1 Back     alignment and function desciption
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 10/122 (8%)

Query: 7   KRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLH 66
           ++ D   +  +GGMPSSHSA V+AL+  + L+ G  S  FA++ + A I M+DA+GVR H
Sbjct: 32  RKLDWSLVTSTGGMPSSHSAAVTALSTGVALEHGLDSSLFAVSAIFAVITMFDATGVRRH 91

Query: 67  AGRQAELLNQIVCEF------PPDHP----LSSVRPLRELLGHTPLQVVAGGILGCVVAF 116
           AG QA ++N++V +F        D P        + L+ELLGH P++V  GG+ G ++  
Sbjct: 92  AGEQATVINKLVIDFNRFVNEAKDFPKAAEKEKQKKLKELLGHQPIEVFFGGLTGILLTL 151

Query: 117 LM 118
           ++
Sbjct: 152 VL 153

Bacillus subtilis (strain 168) (taxid: 224308)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query122
79313323122 Acid phosphatase/vanadium-dependent halo 1.0 1.0 0.852 8e-58
388504270169 unknown [Lotus japonicus] 0.975 0.704 0.882 8e-58
224131630179 predicted protein [Populus trichocarpa] 0.975 0.664 0.873 9e-58
255576905173 conserved hypothetical protein [Ricinus 0.975 0.687 0.865 3e-57
30686309174 Acid phosphatase/vanadium-dependent halo 0.975 0.683 0.857 2e-56
224064959143 predicted protein [Populus trichocarpa] 0.975 0.832 0.873 3e-56
297835142174 hypothetical protein ARALYDRAFT_898610 [ 0.975 0.683 0.848 4e-56
356543676170 PREDICTED: uncharacterized membrane prot 0.975 0.7 0.865 4e-56
351724945171 uncharacterized protein LOC100306390 [Gl 0.975 0.695 0.857 3e-55
449468382167 PREDICTED: uncharacterized membrane prot 0.975 0.712 0.823 3e-55
>gi|79313323|ref|NP_001030741.1| Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana] gi|332643009|gb|AEE76530.1| Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana] Back     alignment and taxonomy information
 Score =  227 bits (578), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 104/122 (85%), Positives = 118/122 (96%)

Query: 1   MLRYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDA 60
           M RYKEKRWDSK+M+ SGGMPSSHSATV+ALAVAIG +EG+G+P+FAIAVVLAC+VMYDA
Sbjct: 1   MFRYKEKRWDSKRMISSGGMPSSHSATVTALAVAIGFEEGAGAPAFAIAVVLACVVMYDA 60

Query: 61  SGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRN 120
           SGVRLHAGRQAELLNQIVCEFPP+HPLS+VRPLRELLGHTP+QV AGGILGCVVA+LMR+
Sbjct: 61  SGVRLHAGRQAELLNQIVCEFPPEHPLSTVRPLRELLGHTPIQVAAGGILGCVVAYLMRS 120

Query: 121 SN 122
           S+
Sbjct: 121 SS 122

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|388504270|gb|AFK40201.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|224131630|ref|XP_002321138.1| predicted protein [Populus trichocarpa] gi|222861911|gb|EEE99453.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255576905|ref|XP_002529338.1| conserved hypothetical protein [Ricinus communis] gi|223531209|gb|EEF33055.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|30686309|ref|NP_188798.2| Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana] gi|22135978|gb|AAM91571.1| unknown protein [Arabidopsis thaliana] gi|23198278|gb|AAN15666.1| unknown protein [Arabidopsis thaliana] gi|332643008|gb|AEE76529.1| Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224064959|ref|XP_002301613.1| predicted protein [Populus trichocarpa] gi|222843339|gb|EEE80886.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297835142|ref|XP_002885453.1| hypothetical protein ARALYDRAFT_898610 [Arabidopsis lyrata subsp. lyrata] gi|297331293|gb|EFH61712.1| hypothetical protein ARALYDRAFT_898610 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356543676|ref|XP_003540286.1| PREDICTED: uncharacterized membrane protein yuiD-like [Glycine max] Back     alignment and taxonomy information
>gi|351724945|ref|NP_001238099.1| uncharacterized protein LOC100306390 [Glycine max] gi|255628385|gb|ACU14537.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|449468382|ref|XP_004151900.1| PREDICTED: uncharacterized membrane protein YuiD-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query122
TAIR|locus:2089950174 AT3G21610 "AT3G21610" [Arabido 0.975 0.683 0.857 3e-53
TAIR|locus:2008575163 AT1G67600 "AT1G67600" [Arabido 0.942 0.705 0.703 6.8e-40
TAIR|locus:2076790284 AT3G61770 "AT3G61770" [Arabido 0.893 0.383 0.5 1.4e-23
UNIPROTKB|Q81YD7141 BAS3352 "Uncharacterized prote 0.860 0.744 0.5 8e-21
TIGR_CMR|BA_3613141 BA_3613 "conserved hypothetica 0.860 0.744 0.5 8e-21
UNIPROTKB|Q71X40157 LMOf2365_2359 "Putative unchar 0.860 0.668 0.443 1.5e-19
TAIR|locus:505006336213 AT3G12685 "AT3G12685" [Arabido 0.581 0.333 0.408 1.2e-16
TAIR|locus:2089950 AT3G21610 "AT3G21610" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
 Identities = 102/119 (85%), Positives = 116/119 (97%)

Query:     4 YKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGV 63
             YKEKRWDSK+M+ SGGMPSSHSATV+ALAVAIG +EG+G+P+FAIAVVLAC+VMYDASGV
Sbjct:    56 YKEKRWDSKRMISSGGMPSSHSATVTALAVAIGFEEGAGAPAFAIAVVLACVVMYDASGV 115

Query:    64 RLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN 122
             RLHAGRQAELLNQIVCEFPP+HPLS+VRPLRELLGHTP+QV AGGILGCVVA+LMR+S+
Sbjct:   116 RLHAGRQAELLNQIVCEFPPEHPLSTVRPLRELLGHTPIQVAAGGILGCVVAYLMRSSS 174
GO:0003674 "molecular_function" evidence=ND
GO:0005886 "plasma membrane" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0009507 "chloroplast" evidence=ISM
TAIR|locus:2008575 AT1G67600 "AT1G67600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076790 AT3G61770 "AT3G61770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q81YD7 BAS3352 "Uncharacterized protein" [Bacillus anthracis (taxid:1392)] Back     alignment and assigned GO terms
TIGR_CMR|BA_3613 BA_3613 "conserved hypothetical protein" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|Q71X40 LMOf2365_2359 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)] Back     alignment and assigned GO terms
TAIR|locus:505006336 AT3G12685 "AT3G12685" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.XIV.3424.1
hypothetical protein (145 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query122
pfam02681141 pfam02681, DUF212, Divergent PAP2 family 2e-63
COG1963153 COG1963, COG1963, Uncharacterized protein conserve 8e-45
cd01610122 cd01610, PAP2_like, PAP2_like proteins, a super-fa 0.003
cd03382159 cd03382, PAP2_dolichyldiphosphatase, PAP2_like pro 0.004
>gnl|CDD|145700 pfam02681, DUF212, Divergent PAP2 family Back     alignment and domain information 
 Score =  189 bits (482), Expect = 2e-63
 Identities = 67/115 (58%), Positives = 86/115 (74%), Gaps = 3/115 (2%)

Query: 4   YKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGV 63
           +KE+RWD + + ++GGMPSSHSA V+ALA  +GLQEG  S  FAIA V A IVMYDA+GV
Sbjct: 27  FKERRWDFRVLFETGGMPSSHSALVTALATGVGLQEGFDSSLFAIAAVFALIVMYDAAGV 86

Query: 64  RLHAGRQAELLNQIVCEFP---PDHPLSSVRPLRELLGHTPLQVVAGGILGCVVA 115
           R  AG+QAE+LNQ++ E      +H L S +PL+ELLGHTPL+V  G +LG V+A
Sbjct: 87  RRAAGKQAEVLNQLIEELFEEVEEHELLSQKPLKELLGHTPLEVFVGALLGIVIA 141

This family is related to the pfam01569 family (personal obs: C Yeats). Length = 141
>gnl|CDD|224874 COG1963, COG1963, Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>gnl|CDD|238813 cd01610, PAP2_like, PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies Back     alignment and domain information
>gnl|CDD|239477 cd03382, PAP2_dolichyldiphosphatase, PAP2_like proteins, dolichyldiphosphatase subfamily Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 122
PF02681141 DUF212: Divergent PAP2 family; InterPro: IPR003832 100.0
COG1963153 Uncharacterized protein conserved in bacteria [Fun 100.0
cd03383109 PAP2_diacylglycerolkinase PAP2_like proteins, diac 99.43
cd03394106 PAP2_like_5 PAP2_like_5 proteins. PAP2 is a super- 99.26
PRK09597190 lipid A 1-phosphatase; Reviewed 99.21
cd03385144 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfa 99.19
cd03382159 PAP2_dolichyldiphosphatase PAP2_like proteins, dol 99.16
cd03393125 PAP2_like_3 PAP2_like_3 proteins. PAP2 is a super- 99.15
cd03391159 PAP2_containing_2_like PAP2, subfamily similar to 99.15
KOG3146228 consensus Dolichyl pyrophosphate phosphatase and r 99.14
cd03388151 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-pho 99.13
cd03395177 PAP2_like_4 PAP2_like_4 proteins. PAP2 is a super- 99.09
COG0671232 PgpB Membrane-associated phospholipid phosphatase 99.07
cd01610122 PAP2_like PAP2_like proteins, a super-family of hi 98.99
PRK10699244 phosphatidylglycerophosphatase B; Provisional 98.99
cd03390193 PAP2_containing_1_like PAP2, subfamily similar to 98.98
PLN02525 352 phosphatidic acid phosphatase family protein 98.98
cd03389186 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lip 98.97
PF01569129 PAP2: PAP2 superfamily This family includes the fo 98.96
cd03384150 PAP2_wunen PAP2, wunen subfamily. Most likely a fa 98.96
cd03392182 PAP2_like_2 PAP2_like_2 proteins. PAP2 is a super- 98.95
cd03381235 PAP2_glucose_6_phosphatase PAP2_like proteins, glu 98.88
PRK11837202 undecaprenyl pyrophosphate phosphatase; Provisiona 98.87
smart00014116 acidPPc Acid phosphatase homologues. 98.73
cd03396197 PAP2_like_6 PAP2_like_6 proteins. PAP2 is a super- 98.72
PLN02731333 Putative lipid phosphate phosphatase 98.69
PLN02250314 lipid phosphate phosphatase 98.64
PLN02715327 lipid phosphate phosphatase 98.58
cd03397232 PAP2_acid_phosphatase PAP2, bacterial acid phospha 98.54
cd03380209 PAP2_like_1 PAP2_like_1 proteins, a sub-family of 98.52
KOG2822 407 consensus Sphingoid base-phosphate phosphatase [Li 98.44
cd03386186 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfa 98.41
cd03398232 PAP2_haloperoxidase PAP2, haloperoxidase_like subf 98.37
KOG3030317 consensus Lipid phosphate phosphatase and related 97.79
KOG4268189 consensus Uncharacterized conserved protein contai 97.61
PF14378191 PAP2_3: PAP2 superfamily 97.0
COG4129 332 Predicted membrane protein [Function unknown] 89.61
PF1436074 PAP2_C: PAP2 superfamily C-terminal 82.61
>PF02681 DUF212: Divergent PAP2 family; InterPro: IPR003832 This family is related to the acid phosphatase/vanadium-dependent haloperoxidases; members of this group are uncharacterised Back     alignment and domain information 
Probab=100.00  E-value=4e-56  Score=332.31  Aligned_cols=114  Identities=62%  Similarity=0.927  Sum_probs=107.2

Q ss_pred             cccccccccccccccccCCCchHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhC
Q 033314            2 LRYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEF   81 (122)
Q Consensus         2 ~~~~~r~~~~~~~~~~GGMPSSHSA~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~   81 (122)
                      +++++|+|||++++++|||||||||+|+||||++|+.+|++||+|+++++||+||||||+||||++||||++||+|++++
T Consensus        25 ~~~~~r~~d~~~~~~sGGMPSSHSA~V~aLat~ig~~~G~~S~~FAia~v~a~IVmyDA~GVRr~aG~qA~~lN~l~~~~  104 (141)
T PF02681_consen   25 NYLKERKWDWRRFFSSGGMPSSHSATVSALATAIGLQEGFDSPLFAIAAVFALIVMYDAMGVRRAAGKQAKVLNQLIEEL  104 (141)
T ss_pred             HHHHhCcccHHHHhhcCCCCchHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHhheeehHHHHHHHHHHHHHHHHHHHHH
Confidence            57889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCC---CCCCCCCccccCCCChHHHHHHHHHHHHHH
Q 033314           82 PPDH---PLSSVRPLRELLGHTPLQVVAGGILGCVVA  115 (122)
Q Consensus        82 ~~~~---~~~~~~~lke~lGHtp~EV~~GallGi~ia  115 (122)
                      ++.+   +...+++|||.+||||.||++|+++|+++|
T Consensus       105 ~~~~~~~~~~~~~~LKE~lGHtp~EV~~G~llGi~vA  141 (141)
T PF02681_consen  105 EEEHQSEPPIQEKKLKELLGHTPLEVFAGALLGIVVA  141 (141)
T ss_pred             HhhhccccchhhhcccccCCCCHHHHHHHHHHHHhhC
Confidence            7665   334457899999999999999999999975

>COG1963 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd03383 PAP2_diacylglycerolkinase PAP2_like proteins, diacylglycerol_kinase like sub-family Back     alignment and domain information
>cd03394 PAP2_like_5 PAP2_like_5 proteins Back     alignment and domain information
>PRK09597 lipid A 1-phosphatase; Reviewed Back     alignment and domain information
>cd03385 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfamily Back     alignment and domain information
>cd03382 PAP2_dolichyldiphosphatase PAP2_like proteins, dolichyldiphosphatase subfamily Back     alignment and domain information
>cd03393 PAP2_like_3 PAP2_like_3 proteins Back     alignment and domain information
>cd03391 PAP2_containing_2_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2 Back     alignment and domain information
>KOG3146 consensus Dolichyl pyrophosphate phosphatase and related acid phosphatases [Lipid transport and metabolism] Back     alignment and domain information
>cd03388 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-phosphatase subfamily Back     alignment and domain information
>cd03395 PAP2_like_4 PAP2_like_4 proteins Back     alignment and domain information
>COG0671 PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism] Back     alignment and domain information
>cd01610 PAP2_like PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies Back     alignment and domain information
>PRK10699 phosphatidylglycerophosphatase B; Provisional Back     alignment and domain information
>cd03390 PAP2_containing_1_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1 Back     alignment and domain information
>PLN02525 phosphatidic acid phosphatase family protein Back     alignment and domain information
>cd03389 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lipid A 1-phosphatase subfamily Back     alignment and domain information
>PF01569 PAP2: PAP2 superfamily This family includes the following Prosite family; InterPro: IPR000326 This entry represents type 2 phosphatidic acid phosphatase (PAP2; 3 Back     alignment and domain information
>cd03384 PAP2_wunen PAP2, wunen subfamily Back     alignment and domain information
>cd03392 PAP2_like_2 PAP2_like_2 proteins Back     alignment and domain information
>cd03381 PAP2_glucose_6_phosphatase PAP2_like proteins, glucose-6-phosphatase subfamily Back     alignment and domain information
>PRK11837 undecaprenyl pyrophosphate phosphatase; Provisional Back     alignment and domain information
>smart00014 acidPPc Acid phosphatase homologues Back     alignment and domain information
>cd03396 PAP2_like_6 PAP2_like_6 proteins Back     alignment and domain information
>PLN02731 Putative lipid phosphate phosphatase Back     alignment and domain information
>PLN02250 lipid phosphate phosphatase Back     alignment and domain information
>PLN02715 lipid phosphate phosphatase Back     alignment and domain information
>cd03397 PAP2_acid_phosphatase PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases Back     alignment and domain information
>cd03380 PAP2_like_1 PAP2_like_1 proteins, a sub-family of PAP2, containing bacterial acid phosphatase, vanadium chloroperoxidases and vanadium bromoperoxidases Back     alignment and domain information
>KOG2822 consensus Sphingoid base-phosphate phosphatase [Lipid transport and metabolism] Back     alignment and domain information
>cd03386 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfamily Back     alignment and domain information
>cd03398 PAP2_haloperoxidase PAP2, haloperoxidase_like subfamily Back     alignment and domain information
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism] Back     alignment and domain information
>KOG4268 consensus Uncharacterized conserved protein containing PAP2 domain [Function unknown] Back     alignment and domain information
>PF14378 PAP2_3: PAP2 superfamily Back     alignment and domain information
>COG4129 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF14360 PAP2_C: PAP2 superfamily C-terminal Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query122
2ipb_A230 PHON protein, class A nonspecific acid phosphatase 98.96
1d2t_A231 Acid phosphatase; all alpha, hydrolase; 1.90A {Esc 98.94
1qi9_A556 Protein (vanadium bromoperoxidase); haloperoxidase 98.22
1up8_A598 Vanadium-dependent bromoperoxidase 1; haloperoxida 97.91
3bb0_A 609 Vanadium chloroperoxidase; protein phosphate-inter 96.56
>2ipb_A PHON protein, class A nonspecific acid phosphatase PHON; class-A bacterial non-specific acid phosphatase; 2.23A {Salmonella typhimurium} PDB: 2a96_A 2akc_A Back     alignment and structure
Probab=98.96  E-value=2.1e-09  Score=82.78  Aligned_cols=68  Identities=22%  Similarity=0.210  Sum_probs=56.0

Q ss_pred             cccCCCchHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCCCccc
Q 033314           16 DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRE   95 (122)
Q Consensus        16 ~~GGMPSSHSA~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~~lke   95 (122)
                      ...+|||+|++..+++++.+.+....   .....+.++..|.++                                  |.
T Consensus       130 ~~~SFPSGHa~~a~a~a~~l~~~~~~---~~~~~~~~a~~v~~S----------------------------------Rv  172 (230)
T 2ipb_A          130 KDGSYPSGHDAYSTLLALVLSQARPE---RAQELARRGWEFGQS----------------------------------RV  172 (230)
T ss_dssp             TSCCSSCHHHHHHHHHHHHHHHHCGG---GHHHHHHHHHHHHHH----------------------------------HH
T ss_pred             CCCCcChHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH----------------------------------HH
Confidence            56799999999999999888876542   122346778888887                                  88


Q ss_pred             cCC-CChHHHHHHHHHHHHHHHHHhc
Q 033314           96 LLG-HTPLQVVAGGILGCVVAFLMRN  120 (122)
Q Consensus        96 ~lG-Htp~EV~~GallGi~ia~~~~~  120 (122)
                      ++| |.|.+|++|.++|++++..+++
T Consensus       173 ~~G~H~~sDVlaG~~lG~~~~~~~~~  198 (230)
T 2ipb_A          173 ICGAHWQSDVDAGRYVGAVEFARLQT  198 (230)
T ss_dssp             HHTSSCHHHHHHHHHHHHHHHHHHTT
T ss_pred             hcCcccHHHHHHHHHHHHHHHHHHHc
Confidence            999 9999999999999999987764
>1d2t_A Acid phosphatase; all alpha, hydrolase; 1.90A {Escherichia blattae} SCOP: a.111.1.1 PDB: 1eoi_A 1iw8_A Back     alignment and structure
>1qi9_A Protein (vanadium bromoperoxidase); haloperoxidase, oxidoreductase; 2.05A {Ascophyllum nodosum} SCOP: a.111.1.2 Back     alignment and structure
>1up8_A Vanadium-dependent bromoperoxidase 1; haloperoxidase, vanadate; 2.20A {Corallina pilulifera} SCOP: a.111.1.2 PDB: 1qhb_A Back     alignment and structure
>3bb0_A Vanadium chloroperoxidase; protein phosphate-intermediate complex, phospatase activity, chloride, metal-binding, oxidoreductase, secreted; 1.50A {Curvularia inaequalis} PDB: 1vns_A 1vnc_A 1vni_A 1idq_A 1vne_A 1vnf_A 1idu_A 1vng_A 1vnh_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query122
d1d2ta_224 Bacterial acid phosphatase {Escherichia blattae [T 98.62
>d1d2ta_ a.111.1.1 (A:) Bacterial acid phosphatase {Escherichia blattae [TaxId: 563]} Back     information, alignment and structure
class: All alpha proteins
fold: Acid phosphatase/Vanadium-dependent haloperoxidase
superfamily: Acid phosphatase/Vanadium-dependent haloperoxidase
family: Type 2 phosphatidic acid phosphatase, PAP2
domain: Bacterial acid phosphatase
species: Escherichia blattae [TaxId: 563]

Probab=98.62  E-value=4e-08  Score=74.75  Aligned_cols=68  Identities=19%  Similarity=0.189  Sum_probs=52.8

Q ss_pred             ccccCCCchHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCCCcc
Q 033314           15 LDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLR   94 (122)
Q Consensus        15 ~~~GGMPSSHSA~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~~lk   94 (122)
                      =.++++||+|++..+++++.++.......   ...+.+|..+.++                                  |
T Consensus       135 ~~~~SfPSGHa~~a~~~a~~la~~~p~~~---~~~~~~a~~~~~S----------------------------------R  177 (224)
T d1d2ta_         135 SKNGSYPSGHTSIGWATALVLAEINPQRQ---NEILKRGYELGQS----------------------------------R  177 (224)
T ss_dssp             CSSCCSSCHHHHHHHHHHHHHHHHCGGGH---HHHHHHHHHHHHH----------------------------------H
T ss_pred             CCCCCcCchhHHHHHHHHHHHHHHhHHHH---HHHHHHHHHhhhH----------------------------------H
Confidence            36789999999999999988877654322   2335567777766                                  7


Q ss_pred             ccCC-CChHHHHHHHHHHHHHHHHHh
Q 033314           95 ELLG-HTPLQVVAGGILGCVVAFLMR  119 (122)
Q Consensus        95 e~lG-Htp~EV~~GallGi~ia~~~~  119 (122)
                      .+.| |.|.+|++|.++|..+...+.
T Consensus       178 v~~g~H~~sDv~aG~~lG~ai~a~l~  203 (224)
T d1d2ta_         178 VICGYHWQSDVDAARVVGSAVVATLH  203 (224)
T ss_dssp             HHHTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHcccccHHHHHHHHHHHHHHHHHHh
Confidence            8889 999999999999988765543