Citrus Sinensis ID: 033358

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-
Protein Sequence
MALNLSSTSSIACSNLQFNRLNTEARKLNLQIKCESKESSGESDIRRSKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLELDE
Secondary Structure (PSIPRED)
ccccccccccccEEEEcccccHHHHEEEEEEEEEEEccccccHHHccccccccccEEEEEcccccccccccccccccccccccccEEEEEEEccccEEEEEEccEEEEEEccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccEcccccccccEEEEEEEEEcccccccccccccccEccccEEEEEccccEcccccccccccccccEEccccEEEEEcccccEEEEEEcccEEEEccccEEEccccc
Coil and Loop (DISEMBL)
malnlsstssiacsnlqfnRLNTEARKLNLQIKCeskessgesdirrsklaigspvivieapkmiktaasvpclransglvkpgdvgriisrkpkdVWAVRLSIGTyllegkyfkplelde
Flexible Loop (DISEMBL)
malnlsstssiacsnlqfnRLNTEARKLNLQIKceskessgesdirrsklaigspviVIEAPKMIKTAAsvpclransglvkpgdvgriisrkpkdvwaVRLSigtyllegkyfkplelde
Low Complexity Region (SEG)
MALNLSSTSSIACSNLQFNRLNTEARKLNLQIKCESKESSGESDIRRSKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLELDE
Disordered region (IsUnstruct)
*************************************************LAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKP*****
Disordered Region (DISOPRED)
********SSIACSN*************************************GSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFK******
Disordered Region (DISEMBL)
********SSIACSNLQFNRLNTEARKLNLQIKC************RSKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLELDE
Disordered Region (DISPRO)
*********SIACSNLQFNRLNTEARKLNLQIKCESKE**********KLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPL****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MALNLSSTSSIACSNLQxxxxxxxxxxxxxxxxxxxxxSSGESDIRRSKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLELDE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
255573269	128	conserved hypothetical protein [Ricinus	1.0	0.945	0.640	6e-35
357462149	128	hypothetical protein MTR_3g079820 [Medic	0.743	0.703	0.771	8e-35
351722681	128	uncharacterized protein LOC100305889 [Gl	0.743	0.703	0.788	9e-35
224102945	129	predicted protein [Populus trichocarpa]	1.0	0.937	0.643	3e-34
225436075	113	PREDICTED: uncharacterized protein LOC10	0.933	1.0	0.625	3e-32
449448996	133	PREDICTED: uncharacterized protein LOC10	0.958	0.872	0.595	4e-32
449503479	133	PREDICTED: uncharacterized LOC101219406	0.958	0.872	0.586	6e-32
21618165	108	unknown [Arabidopsis thaliana] gi|880110	0.859	0.962	0.632	8e-32
18420354	108	uncharacterized protein [Arabidopsis tha	0.859	0.962	0.632	1e-31
297808157	108	hypothetical protein ARALYDRAFT_489002 [	0.752	0.842	0.736	3e-31

>gi|255573269|ref|XP_002527563.1| conserved hypothetical protein [Ricinus communis] gi|223533055|gb|EEF34815.1| conserved hypothetical protein [Ricinus communis]

 Score =  151 bits (381), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 82/128 (64%), Positives = 99/128 (77%), Gaps = 7/128 (5%)

Query: 1   MALNLSSTSSIACSNL-----QFNRLNTEARKLNLQIKCESKESSGES--DIRRSKLAIG 53
           MA +L+ TS+I  + L     QF   N      ++  KC+S+ESS E+    + +KLAIG
Sbjct: 1   MASSLTPTSTIPYTKLHNSILQFTNANFRTPSFSVATKCQSQESSSETSPPAKITKLAIG 60

Query: 54  SPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISRKPKDVWAVRLSIGTYLLEGKY 113
           SP++V+EAPKMIKTAASVPCLR NSGLVKPGDVGRI+SRKPKDVWAVRLSIGTYL++GKY
Sbjct: 61  SPIVVVEAPKMIKTAASVPCLRVNSGLVKPGDVGRIVSRKPKDVWAVRLSIGTYLIDGKY 120

Query: 114 FKPLELDE 121
           FKPLEL E
Sbjct: 121 FKPLELAE 128

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357462149|ref|XP_003601356.1| hypothetical protein MTR_3g079820 [Medicago truncatula] gi|355490404|gb|AES71607.1| hypothetical protein MTR_3g079820 [Medicago truncatula]

 Score =  150 bits (380), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 71/92 (77%), Positives = 85/92 (92%), Gaps = 2/92 (2%)

Query: 32  IKCESKESSGESDI--RRSKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRI 89
           ++CESK+SS E+++  +RSKL  GSP+I+IEAPKMIKTAASVPCLR NSGLVKPGDVGRI
Sbjct: 35  VRCESKDSSEENELLEKRSKLDKGSPIIIIEAPKMIKTAASVPCLRVNSGLVKPGDVGRI 94

Query: 90  ISRKPKDVWAVRLSIGTYLLEGKYFKPLELDE 121
           +SRKPKDVWAVRLSIGTYL++GKYFKPL+L +
Sbjct: 95  VSRKPKDVWAVRLSIGTYLIDGKYFKPLDLAQ 126

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351722681|ref|NP_001238276.1| uncharacterized protein LOC100305889 [Glycine max] gi|255626895|gb|ACU13792.1| unknown [Glycine max]

 Score =  150 bits (379), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 71/90 (78%), Positives = 80/90 (88%)

Query: 32  IKCESKESSGESDIRRSKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIIS 91
           I+CESKESS E   + SKL IGSP+I IEAPKMIKTAA++PCLR NSGLVKPGDVGRI+S
Sbjct: 37  IRCESKESSSELPEKHSKLEIGSPIIFIEAPKMIKTAATMPCLRVNSGLVKPGDVGRIVS 96

Query: 92  RKPKDVWAVRLSIGTYLLEGKYFKPLELDE 121
           RKPKDVWAVRL IGTYL++GKYFKPL+L E
Sbjct: 97  RKPKDVWAVRLRIGTYLVDGKYFKPLDLAE 126

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224102945|ref|XP_002312864.1| predicted protein [Populus trichocarpa] gi|222849272|gb|EEE86819.1| predicted protein [Populus trichocarpa]

 Score =  149 bits (375), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/129 (64%), Positives = 98/129 (75%), Gaps = 8/129 (6%)

Query: 1   MALNLSSTSSIACSN--LQFNRL--NTEARKLNLQIKCESKESSGESD----IRRSKLAI 52
           MA + SSTS+I  +N  LQ N    N   RKLN+  +CES+ESS           +KL I
Sbjct: 1   MAFSFSSTSTIPRTNPTLQSNHSINNARNRKLNVITRCESRESSSSETNLPAKSTAKLGI 60

Query: 53  GSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISRKPKDVWAVRLSIGTYLLEGK 112
           GSPV+VIEAPKMIKTAA++PCLR N+G VKPGDVGRI+SRKPKDVWAVRL+IGTYL++GK
Sbjct: 61  GSPVVVIEAPKMIKTAATMPCLRVNTGFVKPGDVGRIVSRKPKDVWAVRLAIGTYLIDGK 120

Query: 113 YFKPLELDE 121
           YFKPLEL E
Sbjct: 121 YFKPLELSE 129

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225436075|ref|XP_002276937.1| PREDICTED: uncharacterized protein LOC100265104 [Vitis vinifera] gi|296084005|emb|CBI24393.3| unnamed protein product [Vitis vinifera]

 Score =  142 bits (358), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/120 (62%), Positives = 90/120 (75%), Gaps = 7/120 (5%)

Query: 1   MALNLSSTSSIACSNLQFNRLNTEARKLNLQIKCESKESSGESDIRRSKLAIGSPVIVIE 60
           MAL+LSS   +A S      LN    +   ++KCE  E S     + S+L IGSP+IVIE
Sbjct: 1   MALSLSSIFGVAGSK----PLNKSILERQTRVKCEFGEKSSP---KTSELEIGSPIIVIE 53

Query: 61  APKMIKTAASVPCLRANSGLVKPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLELD 120
           APK++KTAASVPCLRAN+GLVK GDVGR++SRKPKDVWAVRLSIGTYL++ KYFKPL LD
Sbjct: 54  APKVLKTAASVPCLRANAGLVKAGDVGRVVSRKPKDVWAVRLSIGTYLIDAKYFKPLTLD 113

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448996|ref|XP_004142251.1| PREDICTED: uncharacterized protein LOC101219406 [Cucumis sativus]

 Score =  141 bits (356), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 72/121 (59%), Positives = 92/121 (76%), Gaps = 5/121 (4%)

Query: 4   NLSSTSSIACSNLQFNRLNTEARKLNLQIKCESKESSGE---SDIRRSKLAIGSPVIVIE 60
           N+   +SI+  N+  N L T ++  ++ +KCES  S  +   S  +  KL IGSPVIVIE
Sbjct: 15  NIRILTSISSFNVS-NTLTTRSQPRSI-VKCESSASPADGQTSPPKSQKLEIGSPVIVIE 72

Query: 61  APKMIKTAASVPCLRANSGLVKPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLELD 120
           APKMIKTAASVPCLR NSG++ PGDVGRI+SRKPKDVWAVRL +GTYL++G+YF+ LELD
Sbjct: 73  APKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGTYLIDGRYFRALELD 132

Query: 121 E 121
           +
Sbjct: 133 Q 133

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449503479|ref|XP_004162023.1| PREDICTED: uncharacterized LOC101219406 [Cucumis sativus]

 Score =  141 bits (355), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 71/121 (58%), Positives = 91/121 (75%), Gaps = 5/121 (4%)

Query: 4   NLSSTSSIACSNLQFNRLNTEARKLNLQIKCESKESSGESDI---RRSKLAIGSPVIVIE 60
           N+   +SI+  N+  N L T ++  ++ +KCES  S  +      +  KL IGSPVIVIE
Sbjct: 15  NIRILTSISSFNVS-NTLTTRSQPRSI-VKCESSASPADGQTPPPKSQKLEIGSPVIVIE 72

Query: 61  APKMIKTAASVPCLRANSGLVKPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLELD 120
           APKMIKTAASVPCLR NSG++ PGDVGRI+SRKPKDVWAVRL +GTYL++G+YF+ LELD
Sbjct: 73  APKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGTYLIDGRYFRALELD 132

Query: 121 E 121
           +
Sbjct: 133 Q 133

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21618165|gb|AAM67215.1| unknown [Arabidopsis thaliana] gi|88011082|gb|ABD38900.1| At5g20935 [Arabidopsis thaliana]

 Score =  140 bits (354), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 67/106 (63%), Positives = 87/106 (82%), Gaps = 2/106 (1%)

Query: 16  LQFNRLNTEARKLNLQIKCESKESSGESDIRRSKLAIGSPVIVIEAPKMIKTAASVPCLR 75
           +Q+   ++ +    + ++C   E + E+   +SKL +GSP+I++EAPK+IKTAAS+PCLR
Sbjct: 1   MQYGLWHSGSFTQRVSVRC--CEIANEAPRPKSKLQVGSPIIIVEAPKVIKTAASMPCLR 58

Query: 76  ANSGLVKPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLELDE 121
           ANSGLVKPGDVGRI+SRKPKD+WAVRLSIGTYLL+GKYFK LELDE
Sbjct: 59  ANSGLVKPGDVGRIVSRKPKDLWAVRLSIGTYLLDGKYFKALELDE 104

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18420354|ref|NP_568406.1| uncharacterized protein [Arabidopsis thaliana] gi|332005525|gb|AED92908.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/106 (63%), Positives = 87/106 (82%), Gaps = 2/106 (1%)

Query: 16  LQFNRLNTEARKLNLQIKCESKESSGESDIRRSKLAIGSPVIVIEAPKMIKTAASVPCLR 75
           +Q+   ++ +    + ++C   E + E+   +SKL +GSP+I++EAPK+IKTAAS+PCLR
Sbjct: 1   MQYGIWHSGSFTQRVSVRC--CEIANEAPRPKSKLQVGSPIIIVEAPKVIKTAASMPCLR 58

Query: 76  ANSGLVKPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLELDE 121
           ANSGLVKPGDVGRI+SRKPKD+WAVRLSIGTYLL+GKYFK LELDE
Sbjct: 59  ANSGLVKPGDVGRIVSRKPKDLWAVRLSIGTYLLDGKYFKALELDE 104

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297808157|ref|XP_002871962.1| hypothetical protein ARALYDRAFT_489002 [Arabidopsis lyrata subsp. lyrata] gi|297317799|gb|EFH48221.1| hypothetical protein ARALYDRAFT_489002 [Arabidopsis lyrata subsp. lyrata]

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/91 (73%), Positives = 78/91 (85%)

Query: 31  QIKCESKESSGESDIRRSKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRII 90
           QI     E + E    +SKL +GSP+I++EAPK+IKTAAS+PCLRANSGLVKPGDVGRI+
Sbjct: 14  QISVRCCEIANEPPRPKSKLQVGSPIIIVEAPKVIKTAASMPCLRANSGLVKPGDVGRIV 73

Query: 91  SRKPKDVWAVRLSIGTYLLEGKYFKPLELDE 121
           SRKPKD+WAVRLSIGTYLL+GKYFK LELDE
Sbjct: 74  SRKPKDLWAVRLSIGTYLLDGKYFKALELDE 104

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
TAIR|locus:505006624	108	CRR42 "AT5G20935" [Arabidopsis	0.743	0.833	0.717	7.7e-32

TAIR|locus:505006624 CRR42 "AT5G20935" [Arabidopsis thaliana (taxid:3702)]

 Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
 Identities = 66/92 (71%), Positives = 81/92 (88%)

Query:    30 LQIKCESKESSGESDIRRSKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRI 89
             + ++C   E + E+   +SKL +GSP+I++EAPK+IKTAAS+PCLRANSGLVKPGDVGRI
Sbjct:    15 VSVRC--CEIANEAPRPKSKLQVGSPIIIVEAPKVIKTAASMPCLRANSGLVKPGDVGRI 72

Query:    90 ISRKPKDVWAVRLSIGTYLLEGKYFKPLELDE 121
             +SRKPKD+WAVRLSIGTYLL+GKYFK LELDE
Sbjct:    73 VSRKPKDLWAVRLSIGTYLLDGKYFKALELDE 104


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.131   0.366    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      121       121   0.00091  102 3  11 23  0.39    31
                                                     29  0.49    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  531 (57 KB)
  Total size of DFA:  108 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.48u 0.13s 11.61t   Elapsed:  00:00:01
  Total cpu time:  11.48u 0.13s 11.61t   Elapsed:  00:00:01
  Start:  Sat May 11 00:21:26 2013   End:  Sat May 11 00:21:27 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	121
pfam11347	63	pfam11347, DUF3148, Protein of unknown function (D	1e-26

>gnl|CDD|192747 pfam11347, DUF3148, Protein of unknown function (DUF3148)

 Score = 93.5 bits (233), Expect = 1e-26
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 51  AIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISRKPKDVWAVRLSIGTYLLE 110
           +IG  V ++  P  +KTA  +P LR    LV  G+VG +++R+P D WAVR   GT+L++
Sbjct: 1   SIGDKVRLVAQPPYLKTADPMPMLRP-PDLVSLGEVGEVLARRPGDYWAVRFRRGTFLID 59

Query: 111 GKYF 114
            +Y 
Sbjct: 60  SQYL 63

This family of proteins has no known function. Length = 63

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	121
PF11347	63	DUF3148: Protein of unknown function (DUF3148); In	100.0
PF04319	75	NifZ: NifZ domain; InterPro: IPR007415 NifZ is a s	85.59

>PF11347 DUF3148: Protein of unknown function (DUF3148); InterPro: IPR021495 This family of proteins has no known function

Probab=100.00  E-value=1.6e-43  Score=239.53  Aligned_cols=63  Identities=52%  Similarity=0.936  Sum_probs=61.6

Q ss_pred             ccCCcEEEEecCCceecCCccccccCCCCccCCCCeeeEeeecCCCEEEEEEcceeEEeeCCcc
Q 033358           51 AIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYF  114 (121)
Q Consensus        51 ~IG~~Vrli~~ppYLKTAdpMPMLRPp~dLV~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl  114 (121)
                      +|||+|+|+++|||||||||||||||| |||++||+|+|++|||+|||+|||++||||||+|||
T Consensus         1 ~iG~~V~l~~~ppylKTAdpMPmLRp~-dlv~~ge~G~i~~rrp~~~w~VRf~~GtfLid~~yl   63 (63)
T PF11347_consen    1 SIGDKVRLIEAPPYLKTADPMPMLRPP-DLVKIGEVGRIVDRRPGDYWAVRFRRGTFLIDSKYL   63 (63)
T ss_pred             CCCCeEEEeecCCceeccCCccccCCc-CccccCCcEEEEEecCCCEEEEEEeceeEeeccccC
Confidence            589999999999999999999999995 999999999999999999999999999999999997

>PF04319 NifZ: NifZ domain; InterPro: IPR007415 NifZ is a short protein is found in the nif (nitrogen fixation) operon

Probab=85.59  E-value=1.5  Score=30.63  Aligned_cols=53  Identities=23%  Similarity=0.353  Sum_probs=40.6

Q ss_pred             ccccccCCcEEEEecCCceecCCccccccCCCCccCCCCeeeEeeec----CCCEEEEEE
Q 033358           47 RSKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISRK----PKDVWAVRL  102 (121)
Q Consensus        47 ~~~~~IG~~Vrli~~ppYLKTAdpMPMLRPp~dLV~~gE~G~Iv~rr----P~d~waVRF  102 (121)
                      ..+|..|++|+....   |+---.+|-..+-.=|++.|++|.|+++-    -.-.++|+|
T Consensus         2 ~p~f~~G~~V~a~~~---irNDGt~Pg~~~g~lLv~~G~~G~V~~iG~flq~~~IY~V~F   58 (75)
T PF04319_consen    2 PPRFEWGDKVRARKD---IRNDGTFPGKEIGELLVRKGDVGYVVSIGTFLQDFYIYLVHF   58 (75)
T ss_pred             CCccCCCCEEEEEEE---eEcCCCCCCCCCCCEEEcCCCcEEEEEeeEEcceeEEEEEEE
Confidence            457999999998764   56666999988877789999999999752    111467777

It is required for the maturation of the nitrogenase MoFe protein. In the absence of NifZ, only one of the two P-clusters of the MoFe protein is matured to the ultimate [8Fe-7S] structure. The other P-cluster site in the protein contains a [4Fe-4S] cluster pair, suggesting that NifZ is specifically required for the formation of the second P-cluster [, , ].; GO: 0009399 nitrogen fixation

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00