Citrus Sinensis ID: 033372

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Protein Sequence
MEVKEMNEILSKNRVEDVSWLCSLSESEVDMLISLKLLILQRAKVIGHEELANKFDLKTLRALGFILMEHLKEKVKDLSLFPGSAEPLAFVAGCNLLKCDNDDILTVEKLKTCLHIDLKR
Secondary Structure (PSIPRED)
ccHHHHHHHHHccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHcccccccccccccccHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccHcHHHHHccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHccccccccccccccHHHHHHHccccccc
Coil and Loop (DISEMBL)
MEVKEMNEILSKNRVEDVSWLCSLSESEVDMLISLKLLILQRAKVIGHEELANKFDLKTLRALGFILMEHLKEKVkdlslfpgsaeplafvagcnllkcdnddilTVEKLKTCLHIDLKR
Flexible Loop (DISEMBL)
mevkemneilsknrvedvSWLCSLSESEVDMLISLKLLILQRAKVIGheelankfdlKTLRALGFILMEHLKEKVKDLSLFPGSAEPLAFVAGCNLLKCDNDDILtveklktclhidlkr
Low Complexity Region (SEG)
MEVKEMNEILSKNRVEDVSWLCSLSESEVDMLISLKLLILQRAKVIGHEELANKFDLKTLRALGFILMEHLKEKVKDLSLFPGSAEPLAFVAGCNLLKCDNDDILTVEKLKTCLHIDLKR
Disordered region (IsUnstruct)
*************RVEDVSWLCSLSESEVDMLISLKLLILQRAKVIGHEELANKFDLKTLRALGFILMEHLKEKVKDLSLFPGSAEPLAFVAGCNLLKCDNDDILTVEKLKTCLHID***
Disordered Region (DISOPRED)
******************SWLCSLSESEVDMLISLKLLILQRAKVIGHEELANKFDLKTLRALGFILMEHLKEKVKDLSLFPGSAEPLAFVAGCNLLKCDNDDILTVEKLKTCLH*****
Disordered Region (DISEMBL)
********ILSKNRVEDVSWLCSLSESEVDMLISLKLLILQRAKVIGHEELANKFDLKTLRALGFILMEHLKEKVKDLSLFPGSAEPLAFVAGCNLLKCDNDDILTVEKLKTCLHIDLKR
Disordered Region (DISPRO)
*****MNEILSKNRVEDVSWLCSLSESEVDMLISLKLLILQRAKVIGHEELANKFDLKTLRALGFILMEHLKEKVKDLSLFPGSAEPLAFVAGCNLLKCDNDDILTVEKLKTCLHI****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEVKEMNEILSKNRVEDVSWLCSLSESEVDMLISLKLLILQRAKVIGHEELANKFDLKTLRALGFILMEHLKEKVKDLSLFPGSAEPLAFVAGCNLLKCDNDDILTVEKLKTCLHIDLKR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	120
297742396	147	unnamed protein product [Vitis vinifera]	0.933	0.761	0.625	4e-32
356556924	151	PREDICTED: uncharacterized protein LOC10	0.883	0.701	0.575	2e-27
356525841	154	PREDICTED: uncharacterized protein LOC10	0.883	0.688	0.566	6e-27
357513171	168	hypothetical protein MTR_8g011490 [Medic	0.916	0.654	0.554	1e-26
255647835	154	unknown [Glycine max]	0.883	0.688	0.556	2e-26
449506107	182	PREDICTED: uncharacterized LOC101210446	0.958	0.631	0.516	4e-26
388510664	168	unknown [Medicago truncatula]	0.916	0.654	0.545	6e-26
224075272	136	predicted protein [Populus trichocarpa]	0.95	0.838	0.570	7e-26
62320079	127	hypothetical protein [Arabidopsis thalia	0.916	0.866	0.531	3e-25
18412725	127	Spc97 / Spc98 family of spindle pole bod	0.916	0.866	0.522	5e-25

>gi|297742396|emb|CBI34545.3| unnamed protein product [Vitis vinifera]

 Score =  142 bits (357), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 70/112 (62%), Positives = 89/112 (79%)

Query: 9   ILSKNRVEDVSWLCSLSESEVDMLISLKLLILQRAKVIGHEELANKFDLKTLRALGFILM 68
           +L  NR+EDV+WLCSLS+SE+DMLISLK+++L+RAKVIGHE+LA KFDLK LRALGFILM
Sbjct: 6   VLGSNRLEDVNWLCSLSDSELDMLISLKMMVLRRAKVIGHEDLAEKFDLKMLRALGFILM 65

Query: 69  EHLKEKVKDLSLFPGSAEPLAFVAGCNLLKCDNDDILTVEKLKTCLHIDLKR 120
           E+L+ +VKDLS  PG A    F+  CNLLKC   D ++ E+LK C+  + KR
Sbjct: 66  EYLRGQVKDLSAIPGLAGLDKFLNECNLLKCSLKDTISTEELKACICTNSKR 117

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556924|ref|XP_003546770.1| PREDICTED: uncharacterized protein LOC100818832 [Glycine max]

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/106 (57%), Positives = 82/106 (77%)

Query: 13  NRVEDVSWLCSLSESEVDMLISLKLLILQRAKVIGHEELANKFDLKTLRALGFILMEHLK 72
            RVEDV+WLCSLSESE+DMLISLKLLI+QRAK++G +ELA+KF+LK +RA+  +LM HLK
Sbjct: 25  TRVEDVAWLCSLSESEIDMLISLKLLIIQRAKMMGCKELASKFNLKMIRAIALVLMGHLK 84

Query: 73  EKVKDLSLFPGSAEPLAFVAGCNLLKCDNDDILTVEKLKTCLHIDL 118
           E++KD SL P   +  +F+  CNLLKC N+    +++L T L  D+
Sbjct: 85  EEIKDSSLIPNMVKSTSFLDACNLLKCSNEVDANIDELSTSLGADI 130

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525841|ref|XP_003531530.1| PREDICTED: uncharacterized protein LOC100778207 isoform 1 [Glycine max] gi|356525843|ref|XP_003531531.1| PREDICTED: uncharacterized protein LOC100778207 isoform 2 [Glycine max]

 Score =  124 bits (312), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 60/106 (56%), Positives = 80/106 (75%)

Query: 13  NRVEDVSWLCSLSESEVDMLISLKLLILQRAKVIGHEELANKFDLKTLRALGFILMEHLK 72
            RVEDV+WLCSLSESE+DMLISLKLLI+QRAK++G +ELA+KF+LK +RA+  +LMEHLK
Sbjct: 25  TRVEDVAWLCSLSESEIDMLISLKLLIIQRAKMMGCKELASKFNLKMIRAIALVLMEHLK 84

Query: 73  EKVKDLSLFPGSAEPLAFVAGCNLLKCDNDDILTVEKLKTCLHIDL 118
            ++K  SL P + E  +F+  CNLLKC N+    ++ L   L  D+
Sbjct: 85  AEIKGSSLIPNTVESTSFLDACNLLKCSNEVDANIDDLSASLGADI 130

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357513171|ref|XP_003626874.1| hypothetical protein MTR_8g011490 [Medicago truncatula] gi|355520896|gb|AET01350.1| hypothetical protein MTR_8g011490 [Medicago truncatula]

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 61/110 (55%), Positives = 85/110 (77%)

Query: 10  LSKNRVEDVSWLCSLSESEVDMLISLKLLILQRAKVIGHEELANKFDLKTLRALGFILME 69
           +++ RV+DV+WLCSLSESE+DMLISLKLLI++RA+ IG + LANKFDLK LRA+  +LME
Sbjct: 20  ITETRVQDVAWLCSLSESEIDMLISLKLLIIKRAEWIGCKNLANKFDLKMLRAIALVLME 79

Query: 70  HLKEKVKDLSLFPGSAEPLAFVAGCNLLKCDNDDILTVEKLKTCLHIDLK 119
           +LK +VKD SL P   +  AF+  CNLL C+++   T+E+L T +  D++
Sbjct: 80  NLKAEVKDASLVPDMVKSTAFLDVCNLLNCNSEVSATIEELSTSVGADIQ 129

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255647835|gb|ACU24377.1| unknown [Glycine max]

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/106 (55%), Positives = 79/106 (74%)

Query: 13  NRVEDVSWLCSLSESEVDMLISLKLLILQRAKVIGHEELANKFDLKTLRALGFILMEHLK 72
            RVEDV+WLCSLSESE+DMLISLKLLI+QRAK++G +ELA+KF+LK +RA+  +LMEHLK
Sbjct: 25  TRVEDVAWLCSLSESEIDMLISLKLLIIQRAKMMGCKELASKFNLKMIRAIALVLMEHLK 84

Query: 73  EKVKDLSLFPGSAEPLAFVAGCNLLKCDNDDILTVEKLKTCLHIDL 118
            ++K  SL P + E  +F+  CNLLKC N+    ++ L      D+
Sbjct: 85  AEIKGSSLIPNTVESTSFLDACNLLKCSNEVDANIDDLSASFGADI 130

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449506107|ref|XP_004162655.1| PREDICTED: uncharacterized LOC101210446 [Cucumis sativus]

 Score =  121 bits (304), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 63/122 (51%), Positives = 89/122 (72%), Gaps = 7/122 (5%)

Query: 1   MEVKEMNEILSKNRVEDVSWLCSLSESEVDMLISLKLLILQRAKVIGHEELANKFDLKTL 60
           + ++E NEIL  NR+ED+SWLCSLSESE+D+LIS+K+L+LQRAK IGHE LA KFDL+TL
Sbjct: 46  ISMEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTL 105

Query: 61  RALGFILMEHLKEKVK--DLSLFPGSAEPLAFVAGCNLLKCDNDDILTVEKLKTCLHIDL 118
           RA+GF+LMEHLK K++  D+S    S         CNLL  + + IL+++++   +  D 
Sbjct: 106 RAIGFVLMEHLKGKLRTSDVSDLSQST-----FNACNLLDSNLEKILSIDEIMASICSDR 160

Query: 119 KR 120
           ++
Sbjct: 161 RK 162

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388510664|gb|AFK43398.1| unknown [Medicago truncatula]

 Score =  121 bits (303), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 60/110 (54%), Positives = 84/110 (76%)

Query: 10  LSKNRVEDVSWLCSLSESEVDMLISLKLLILQRAKVIGHEELANKFDLKTLRALGFILME 69
           +++ RV+DV+W CSLSESE+DMLISLKLLI++RA+ IG + LANKFDLK LRA+  +LME
Sbjct: 20  ITETRVQDVAWPCSLSESEIDMLISLKLLIIKRAEWIGCKNLANKFDLKMLRAIALVLME 79

Query: 70  HLKEKVKDLSLFPGSAEPLAFVAGCNLLKCDNDDILTVEKLKTCLHIDLK 119
           +LK +VKD SL P   +  AF+  CNLL C+++   T+E+L T +  D++
Sbjct: 80  NLKAEVKDASLVPDMVKSTAFLDVCNLLNCNSEVSATIEELSTSVGADIQ 129

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224075272|ref|XP_002304585.1| predicted protein [Populus trichocarpa] gi|222842017|gb|EEE79564.1| predicted protein [Populus trichocarpa]

 Score =  120 bits (302), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 65/114 (57%), Positives = 80/114 (70%)

Query: 7   NEILSKNRVEDVSWLCSLSESEVDMLISLKLLILQRAKVIGHEELANKFDLKTLRALGFI 66
            E L  N  ED+ WLC+LSESE+DMLI+LK LIL RAKV+GH+ELA KFD  TLRA+G  
Sbjct: 5   GETLVDNSPEDIRWLCNLSESELDMLITLKSLILHRAKVLGHDELAKKFDSPTLRAVGLF 64

Query: 67  LMEHLKEKVKDLSLFPGSAEPLAFVAGCNLLKCDNDDILTVEKLKTCLHIDLKR 120
           LME+LK KVKDLS   G  +  AF   CNLLK +  D  ++E+LK  + ID +R
Sbjct: 65  LMEYLKGKVKDLSHVQGLTKLAAFSDCCNLLKGNPGDDSSIEELKASIDIDERR 118

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|62320079|dbj|BAD94245.1| hypothetical protein [Arabidopsis thaliana]

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 3   VKEMNEILSKNRVEDVSWLCSLSESEVDMLISLKLLILQRAKVIGHEELANKFDLKTLRA 62
           ++E+ +IL  NR +D++W CSLSESE+D+LISLK L +QRAK+ GH+ELA+KFDLK LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 63  LGFILMEHLKEKVK-DLSLFPGSAEPLAFVAGCNLLKCDNDDILTVEKLKT 112
           LG +LMEH K++V+ D SL P     L  +  CNLLK   DD + +E++ T
Sbjct: 61  LGLVLMEHAKKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILT 111

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18412725|ref|NP_565234.1| Spc97 / Spc98 family of spindle pole body (SBP) component [Arabidopsis thaliana] gi|42572197|ref|NP_974189.1| Spc97 / Spc98 family of spindle pole body (SBP) component [Arabidopsis thaliana] gi|145327753|ref|NP_001077852.1| Spc97 / Spc98 family of spindle pole body (SBP) component [Arabidopsis thaliana] gi|111074472|gb|ABH04609.1| At1g80245 [Arabidopsis thaliana] gi|332198254|gb|AEE36375.1| Spc97 / Spc98 family of spindle pole body (SBP) component [Arabidopsis thaliana] gi|332198255|gb|AEE36376.1| Spc97 / Spc98 family of spindle pole body (SBP) component [Arabidopsis thaliana] gi|332198256|gb|AEE36377.1| Spc97 / Spc98 family of spindle pole body (SBP) component [Arabidopsis thaliana]

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 3   VKEMNEILSKNRVEDVSWLCSLSESEVDMLISLKLLILQRAKVIGHEELANKFDLKTLRA 62
           ++E+ +IL  NR +D++W CSLSESE+D+LISLK L +QRAK+ GH+ELA+KFDLK LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 63  LGFILMEHLKEKVK-DLSLFPGSAEPLAFVAGCNLLKCDNDDILTVEKLKT 112
           LG +LMEH +++V+ D SL P     L  +  CNLLK   DD + +E++ T
Sbjct: 61  LGLVLMEHARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILT 111

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	120
TAIR|locus:505006233	127	AT1G80245 [Arabidopsis thalian	0.916	0.866	0.522	4.5e-27

TAIR|locus:505006233 AT1G80245 [Arabidopsis thaliana (taxid:3702)]

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 58/111 (52%), Positives = 82/111 (73%)

Query:     3 VKEMNEILSKNRVEDVSWLCSLSESEVDMLISLKLLILQRAKVIGHEELANKFDLKTLRA 62
             ++E+ +IL  NR +D++W CSLSESE+D+LISLK L +QRAK+ GH+ELA+KFDLK LR+
Sbjct:     1 MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query:    63 LGFILMEHLKEKVK-DLSLFPGSAEPLAFVAGCNLLKCDNDDILTVEKLKT 112
             LG +LMEH +++V+ D SL P     L  +  CNLLK   DD + +E++ T
Sbjct:    61 LGLVLMEHARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILT 111


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.138   0.389    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      120       120   0.00091  102 3  11 22  0.47    30
                                                     29  0.48    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  542 (58 KB)
  Total size of DFA:  117 KB (2078 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.69u 0.18s 13.87t   Elapsed:  00:00:01
  Total cpu time:  13.69u 0.18s 13.87t   Elapsed:  00:00:01
  Start:  Sat May 11 00:54:11 2013   End:  Sat May 11 00:54:12 2013

GO:0000226 "microtubule cytoskeleton organization" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0006626 "protein targeting to mitochondrion" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	120
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	7e-04

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 36.1 bits (82), Expect = 7e-04
 Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 18/42 (42%)

Query: 72  KEKVKDLS----LF-PGSAEPLAFVAGCNLLKCDNDDILTVE 108
           K+ +K L     L+   SA  LA  A             T+E
Sbjct: 19  KQALKKLQASLKLYADDSAPALAIKA-------------TME 47

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00