Citrus Sinensis ID: 033708
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 113 | ||||||
| 255573421 | 280 | conserved hypothetical protein [Ricinus | 0.946 | 0.382 | 0.887 | 7e-51 | |
| 118481618 | 280 | unknown [Populus trichocarpa] | 1.0 | 0.403 | 0.782 | 3e-49 | |
| 449461537 | 279 | PREDICTED: uncharacterized protein LOC10 | 0.840 | 0.340 | 0.926 | 5e-46 | |
| 388504306 | 282 | unknown [Lotus japonicus] | 0.946 | 0.379 | 0.794 | 1e-45 | |
| 224138040 | 280 | predicted protein [Populus trichocarpa] | 1.0 | 0.403 | 0.717 | 4e-45 | |
| 4097569 | 111 | GMFP4, partial [Glycine max] | 0.946 | 0.963 | 0.775 | 6e-44 | |
| 356511490 | 277 | PREDICTED: uncharacterized protein LOC54 | 0.946 | 0.386 | 0.766 | 1e-43 | |
| 358248102 | 277 | uncharacterized protein LOC100793680 [Gl | 0.946 | 0.386 | 0.766 | 2e-43 | |
| 356497054 | 283 | PREDICTED: uncharacterized protein LOC10 | 0.858 | 0.342 | 0.816 | 2e-41 | |
| 255647653 | 283 | unknown [Glycine max] | 0.858 | 0.342 | 0.816 | 2e-41 |
| >gi|255573421|ref|XP_002527636.1| conserved hypothetical protein [Ricinus communis] gi|223532941|gb|EEF34707.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 204 bits (518), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 95/107 (88%), Positives = 103/107 (96%)
Query: 7 LQALIFLLAIIVRAANRPVEYDSDDELIAPRQQIRQPLINRPTPPATGVPVAGSLDQRPS 66
L+AL+F+LA+IVRAANRP EYDSDDELIAPRQQIRQPL+NRP PATGVPVAG+LDQRPS
Sbjct: 174 LEALLFVLALIVRAANRPAEYDSDDELIAPRQQIRQPLLNRPPGPATGVPVAGTLDQRPS 233
Query: 67 RNDAWSTRMREKYGLDTSEFTYNPSESHRFQQVATQPAEERSRCTIM 113
RNDAWSTRMREKYGLDTSEF+YNPSESHRFQQV+TQP EERSRCTIM
Sbjct: 234 RNDAWSTRMREKYGLDTSEFSYNPSESHRFQQVSTQPTEERSRCTIM 280
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118481618|gb|ABK92751.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|449461537|ref|XP_004148498.1| PREDICTED: uncharacterized protein LOC101203030 [Cucumis sativus] gi|449527337|ref|XP_004170668.1| PREDICTED: uncharacterized protein LOC101226567 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|388504306|gb|AFK40219.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
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| >gi|224138040|ref|XP_002326503.1| predicted protein [Populus trichocarpa] gi|222833825|gb|EEE72302.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|4097569|gb|AAD09513.1| GMFP4, partial [Glycine max] | Back alignment and taxonomy information |
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| >gi|356511490|ref|XP_003524459.1| PREDICTED: uncharacterized protein LOC547883 [Glycine max] | Back alignment and taxonomy information |
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| >gi|358248102|ref|NP_001240069.1| uncharacterized protein LOC100793680 [Glycine max] gi|255641974|gb|ACU21254.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|356497054|ref|XP_003517379.1| PREDICTED: uncharacterized protein LOC100791911 [Glycine max] | Back alignment and taxonomy information |
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| >gi|255647653|gb|ACU24289.1| unknown [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 113 | ||||||
| TAIR|locus:2033718 | 280 | TOM2A "tobamovirus multiplicat | 0.938 | 0.378 | 0.773 | 1.7e-41 | |
| TAIR|locus:2038997 | 270 | AT2G20230 [Arabidopsis thalian | 0.654 | 0.274 | 0.372 | 0.00016 |
| TAIR|locus:2033718 TOM2A "tobamovirus multiplication 2A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 82/106 (77%), Positives = 91/106 (85%)
Query: 8 QALIFLLAIIVRAANRPVEYDSDDELIAPRQQIRQPLINRPTPPATGVPVAGSLDQRPSR 67
+AL+FLLA++VRAAN P EYDSDDE +APRQQIRQP INR P TGVPVA +LDQRPSR
Sbjct: 175 EALLFLLALMVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSR 234
Query: 68 NDAWSTRMREKYGLDTSEFTYNPSESHRFQQVATQPAEERSRCTIM 113
+D WS RMREKYGLDTSEFTYNPSESHRFQQ+ QP EE+ RCTIM
Sbjct: 235 SDPWSARMREKYGLDTSEFTYNPSESHRFQQMPAQPNEEKGRCTIM 280
|
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| TAIR|locus:2038997 AT2G20230 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| eugene3.01180051 | Putative uncharacterized protein (267 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00