Citrus Sinensis ID: 033718

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110--
Protein Sequence
MNFRSLDEFWAFYVNQHSKPSTRRWHFVGTLISIFFLLLSVFFSWCFLVFVPIFGYGFAWYSHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKMDREIKRLGKRPVLQVF
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHccccHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHEEEccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHccccEEEEc
Coil and Loop (DISEMBL)
MNFRSLDEFWAFYVnqhskpstrrwHFVGTLISIFFLLLSVFFSWCFLVFVPIFGYGFAWYSHFFvegnvpatfghpfwSVLCDFKMFGLMLTGKMDREIkrlgkrpvlqvf
Flexible Loop (DISEMBL)
MNFRSLDEFWAFYVNqhskpstrrWHFVGTLISIFFLLLSVFFSWCFLVFVPIFGYGFAWYSHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKMDreikrlgkrpvlqvf
Low Complexity Region (SEG)
MNFRSLDEFWAFYVNQHSKPSTRRWHFVGTlisifflllsvffswcflvfvPIFGYGFAWYSHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKMDREIKRLGKRPVLQVF
Disordered region (IsUnstruct)
*****LDEFWAFYVNQHSKPSTRRWHFVGTLISIFFLLLSVFFSWCFLVFVPIFGYGFAWYSHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKMDR**************
Disordered Region (DISOPRED)
**FRSLDEFWAFYVNQHSKPSTRRWHFVGTLISIFFLLLSVFFSWCFLVFVPIFGYGFAWYSHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKMDREIKRLGKRPVLQ**
Disordered Region (DISEMBL)
MNFRSLDEFWAFYVNQHSKPSTRRWHFVGTLISIFFLLLSVFFSWCFLVFVPIFGYGFAWYSHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKMDREIKRLGKRPVLQVF
Disordered Region (DISPRO)
*NFRSLDEFWAFYVNQHSKPSTRRWHFVGTLISIFFLLLSVFFSWCFLVFVPIFGYGFAWYSHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKMDREIKRLGKRPVLQVF
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNFRSLDEFWAFYVNQHSKPSTRRWHFVGTLISIFFLLLSVFFSWCFLVFVPIFGYGFAWYSHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKMDREIKRLGKRPVLQVF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	112
356568043	112	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.892	1e-50
449439926	112	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.830	5e-49
225440610	112	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.821	2e-48
356520985	116	PREDICTED: uncharacterized protein LOC10	1.0	0.965	0.892	3e-45
118482981	113	unknown [Populus trichocarpa]	1.0	0.991	0.803	1e-44
116782240	112	unknown [Picea sitchensis]	0.991	0.991	0.747	6e-44
297829444	112	hypothetical protein ARALYDRAFT_478219 [	0.991	0.991	0.693	3e-41
18398365	112	uncharacterized protein [Arabidopsis tha	0.991	0.991	0.693	8e-41
224090919	112	predicted protein [Populus trichocarpa]	1.0	1.0	0.785	2e-40
217071108	112	unknown [Medicago truncatula] gi|2170751	1.0	1.0	0.785	4e-40

>gi|356568043|ref|XP_003552223.1| PREDICTED: uncharacterized protein LOC100804127 [Glycine max]

 Score =  202 bits (515), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 100/112 (89%), Positives = 102/112 (91%)

Query: 1   MNFRSLDEFWAFYVNQHSKPSTRRWHFVGTLISIFFLLLSVFFSWCFLVFVPIFGYGFAW 60
           MNFRSL+EFWAFYVNQHSKPSTRRWHFVGTL SIFFL  SVFFSW FL  VP  GYG AW
Sbjct: 1   MNFRSLEEFWAFYVNQHSKPSTRRWHFVGTLFSIFFLFCSVFFSWWFLFLVPFSGYGCAW 60

Query: 61  YSHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKMDREIKRLGKRPVLQVF 112
           YSHFFVEGNVPATFGHPFWS+LCD KMFGLMLTGKMDREIKRLGKRPVLQVF
Sbjct: 61  YSHFFVEGNVPATFGHPFWSLLCDLKMFGLMLTGKMDREIKRLGKRPVLQVF 112

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439926|ref|XP_004137736.1| PREDICTED: uncharacterized protein LOC101216787 [Cucumis sativus] gi|449483446|ref|XP_004156594.1| PREDICTED: uncharacterized protein LOC101231004 [Cucumis sativus]

 Score =  197 bits (502), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 93/112 (83%), Positives = 101/112 (90%)

Query: 1   MNFRSLDEFWAFYVNQHSKPSTRRWHFVGTLISIFFLLLSVFFSWCFLVFVPIFGYGFAW 60
           MNFRSLDEFW FY+NQHSKPSTRRWHF+GTL +IFF L S+ FSW FL FVP+ GYGFAW
Sbjct: 1   MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSAIFFFLCSLLFSWWFLFFVPLTGYGFAW 60

Query: 61  YSHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKMDREIKRLGKRPVLQVF 112
           YSHFF+E NVPATF HPFWS+LCDFKMFGLMLTG MDREIKRLGKRPVLQ+F
Sbjct: 61  YSHFFIEENVPATFAHPFWSLLCDFKMFGLMLTGNMDREIKRLGKRPVLQIF 112

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440610|ref|XP_002278204.1| PREDICTED: uncharacterized protein LOC100251043 isoform 1 [Vitis vinifera] gi|359481687|ref|XP_003632659.1| PREDICTED: uncharacterized protein LOC100251043 isoform 2 [Vitis vinifera]

 Score =  196 bits (497), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 92/112 (82%), Positives = 101/112 (90%)

Query: 1   MNFRSLDEFWAFYVNQHSKPSTRRWHFVGTLISIFFLLLSVFFSWCFLVFVPIFGYGFAW 60
           MNFRS++EFW FYVNQHSKP+TRRWHFVGTL  IFFL  S FF+W  +  VP+FGYGFAW
Sbjct: 1   MNFRSMEEFWPFYVNQHSKPATRRWHFVGTLTGIFFLFYSAFFNWWCVFLVPLFGYGFAW 60

Query: 61  YSHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKMDREIKRLGKRPVLQVF 112
           YSHFFVEGNVPATFGHP WS+LCDFKMFGLMLTG+MD+EIKRLGKRPVLQVF
Sbjct: 61  YSHFFVEGNVPATFGHPIWSLLCDFKMFGLMLTGQMDKEIKRLGKRPVLQVF 112

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520985|ref|XP_003529139.1| PREDICTED: uncharacterized protein LOC100818649 [Glycine max]

 Score =  185 bits (470), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 100/112 (89%), Positives = 103/112 (91%)

Query: 1   MNFRSLDEFWAFYVNQHSKPSTRRWHFVGTLISIFFLLLSVFFSWCFLVFVPIFGYGFAW 60
           MNFRSL+EFWAFYVNQHS PSTRRWHFVGTL SI FL  SVFFSW FL FVP+ GYG AW
Sbjct: 5   MNFRSLEEFWAFYVNQHSMPSTRRWHFVGTLFSILFLFFSVFFSWWFLFFVPLSGYGCAW 64

Query: 61  YSHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKMDREIKRLGKRPVLQVF 112
           YSHFFVEGNVPATFGHPFWS+LCDFKMFGLMLTGKMDREIKRLGKRPVLQVF
Sbjct: 65  YSHFFVEGNVPATFGHPFWSLLCDFKMFGLMLTGKMDREIKRLGKRPVLQVF 116

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118482981|gb|ABK93402.1| unknown [Populus trichocarpa]

 Score =  183 bits (464), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 90/112 (80%), Positives = 95/112 (84%)

Query: 1   MNFRSLDEFWAFYVNQHSKPSTRRWHFVGTLISIFFLLLSVFFSWCFLVFVPIFGYGFAW 60
           MNFRSLDEFW+FYV QHSKPSTRRWHFVGTL S+  LL S+ F+  FL  VP  GYG AW
Sbjct: 2   MNFRSLDEFWSFYVTQHSKPSTRRWHFVGTLASMLLLLNSLVFNLWFLFLVPFVGYGCAW 61

Query: 61  YSHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKMDREIKRLGKRPVLQVF 112
           YSHFFVEGNVPATFGHP WS LCDFKMFGLMLTG+MDREIKRL KRPVLQ F
Sbjct: 62  YSHFFVEGNVPATFGHPVWSFLCDFKMFGLMLTGQMDREIKRLEKRPVLQGF 113

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116782240|gb|ABK22426.1| unknown [Picea sitchensis]

 Score =  181 bits (458), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 83/111 (74%), Positives = 94/111 (84%)

Query: 1   MNFRSLDEFWAFYVNQHSKPSTRRWHFVGTLISIFFLLLSVFFSWCFLVFVPIFGYGFAW 60
           M FR+ +EFWAFY+NQHSK STRRWHF G L + FFLL ++   W    FVPIFGYG AW
Sbjct: 1   MQFRNREEFWAFYMNQHSKASTRRWHFCGMLAAGFFLLAAILIKWWLGFFVPIFGYGLAW 60

Query: 61  YSHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKMDREIKRLGKRPVLQV 111
           YSHFF+EGNVPA+FGHP WS+LCDFKMFGLMLTG+MDREIKRLGKRP+LQV
Sbjct: 61  YSHFFIEGNVPASFGHPVWSLLCDFKMFGLMLTGQMDREIKRLGKRPILQV 111

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297829444|ref|XP_002882604.1| hypothetical protein ARALYDRAFT_478219 [Arabidopsis lyrata subsp. lyrata] gi|297328444|gb|EFH58863.1| hypothetical protein ARALYDRAFT_478219 [Arabidopsis lyrata subsp. lyrata]

 Score =  172 bits (435), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 77/111 (69%), Positives = 90/111 (81%)

Query: 1   MNFRSLDEFWAFYVNQHSKPSTRRWHFVGTLISIFFLLLSVFFSWCFLVFVPIFGYGFAW 60
           MNFRS +EFW FYV QHS P TRRWHF+G + SI  L+ S+  +W F+  VP+ GYGFAW
Sbjct: 1   MNFRSFEEFWPFYVMQHSNPLTRRWHFIGIIASIVALMCSILINWWFVALVPLLGYGFAW 60

Query: 61  YSHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKMDREIKRLGKRPVLQV 111
           YSHFFVEGNVPA+FGHP WS LCD KMF LMLTG M+RE+KRLGKRP+LQ+
Sbjct: 61  YSHFFVEGNVPASFGHPLWSFLCDLKMFSLMLTGSMEREMKRLGKRPLLQL 111

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18398365|ref|NP_566342.1| uncharacterized protein [Arabidopsis thaliana] gi|21554082|gb|AAM63163.1| unknown [Arabidopsis thaliana] gi|27311565|gb|AAO00748.1| Unknown protein [Arabidopsis thaliana] gi|30102820|gb|AAP21328.1| At3g09085 [Arabidopsis thaliana] gi|332641197|gb|AEE74718.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  170 bits (431), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 77/111 (69%), Positives = 90/111 (81%)

Query: 1   MNFRSLDEFWAFYVNQHSKPSTRRWHFVGTLISIFFLLLSVFFSWCFLVFVPIFGYGFAW 60
           MNFRS +EFW FY+ QHS PSTRR HF+G + SI  L+ S+  +W FL  VP+ GYGFAW
Sbjct: 1   MNFRSFEEFWPFYMMQHSNPSTRRLHFIGIIASIVALICSILINWWFLALVPLLGYGFAW 60

Query: 61  YSHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKMDREIKRLGKRPVLQV 111
           YSHFFVEGNVPA+FGHP WS LCD KMF LMLTG M+RE+KRLGKRP+LQ+
Sbjct: 61  YSHFFVEGNVPASFGHPLWSFLCDLKMFSLMLTGSMEREMKRLGKRPLLQL 111

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224090919|ref|XP_002309116.1| predicted protein [Populus trichocarpa] gi|222855092|gb|EEE92639.1| predicted protein [Populus trichocarpa]

 Score =  169 bits (428), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 88/112 (78%), Positives = 96/112 (85%)

Query: 1   MNFRSLDEFWAFYVNQHSKPSTRRWHFVGTLISIFFLLLSVFFSWCFLVFVPIFGYGFAW 60
           MNFRSL+EFW+FYV QHSKPSTRRWHFVGTL SI  LL S+ F+  FL FVP+ GYGFAW
Sbjct: 1   MNFRSLEEFWSFYVTQHSKPSTRRWHFVGTLSSILLLLYSLVFNLWFLFFVPLVGYGFAW 60

Query: 61  YSHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKMDREIKRLGKRPVLQVF 112
           YSHFFVEGNVP +FGHP WS  CD KMFGLMLTG+MDREIKRLGKRP+LQ F
Sbjct: 61  YSHFFVEGNVPTSFGHPVWSFRCDCKMFGLMLTGQMDREIKRLGKRPILQGF 112

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217071108|gb|ACJ83914.1| unknown [Medicago truncatula] gi|217075176|gb|ACJ85948.1| unknown [Medicago truncatula] gi|388509718|gb|AFK42925.1| unknown [Medicago truncatula]

 Score =  168 bits (425), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 88/112 (78%), Positives = 99/112 (88%)

Query: 1   MNFRSLDEFWAFYVNQHSKPSTRRWHFVGTLISIFFLLLSVFFSWCFLVFVPIFGYGFAW 60
           MNFR+L++FWAFYV+QHSK +TR WHFVGT +S+ FLL S  FSW FL+FVP+ GYG AW
Sbjct: 1   MNFRNLEDFWAFYVSQHSKRATRHWHFVGTFLSLLFLLCSFLFSWWFLLFVPLSGYGCAW 60

Query: 61  YSHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKMDREIKRLGKRPVLQVF 112
           YSHFFVE NVPATFGHPFWS LCD+KMFGLMLTG+MDREIKRLGKRPVLQ F
Sbjct: 61  YSHFFVEKNVPATFGHPFWSFLCDYKMFGLMLTGQMDREIKRLGKRPVLQGF 112

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	112
TAIR|locus:505006332	112	AT3G09085 "AT3G09085" [Arabido	0.991	0.991	0.621	5.7e-36
UNIPROTKB|Q48FT3	103	PSPPH_3605 "Uncharacterized pr	0.839	0.912	0.452	8.6e-17
UNIPROTKB|Q885N1	103	PSPTO_1800 "Uncharacterized pr	0.839	0.912	0.452	8.6e-17
UNIPROTKB|Q4KGC0	103	PFL_1587 "Uncharacterized prot	0.839	0.912	0.421	6e-16
DICTYBASE|DDB_G0275513	104	DDB_G0275513 "DUF962 family pr	0.839	0.903	0.368	5.4e-15
UNIPROTKB|Q8EGI7	101	SO_1615 "Uncharacterized prote	0.839	0.930	0.368	2.1e-13
TIGR_CMR|SO_1615	101	SO_1615 "conserved hypothetica	0.839	0.930	0.368	2.1e-13
UNIPROTKB|Q481Q5	101	CPS_2498 "Putative uncharacter	0.839	0.930	0.357	1.2e-12
TIGR_CMR|CPS_2498	101	CPS_2498 "conserved hypothetic	0.839	0.930	0.357	1.2e-12

TAIR|locus:505006332 AT3G09085 "AT3G09085" [Arabidopsis thaliana (taxid:3702)]

 Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
 Identities = 69/111 (62%), Positives = 78/111 (70%)

Query:     1 MNFRSLDEFWAFYVNQHSKPSTRRWHFVGTXXXXXXXXXXXXXXXXXXXXXPIFGYGFAW 60
             MNFRS +EFW FY+ QHS PSTRR HF+G                      P+ GYGFAW
Sbjct:     1 MNFRSFEEFWPFYMMQHSNPSTRRLHFIGIIASIVALICSILINWWFLALVPLLGYGFAW 60

Query:    61 YSHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKMDREIKRLGKRPVLQV 111
             YSHFFVEGNVPA+FGHP WS LCD KMF LMLTG M+RE+KRLGKRP+LQ+
Sbjct:    61 YSHFFVEGNVPASFGHPLWSFLCDLKMFSLMLTGSMEREMKRLGKRPLLQL 111

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q48FT3 PSPPH_3605 "Uncharacterized protein" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)]

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 43/95 (45%), Positives = 53/95 (55%)

Query:     3 FRSLDEFWAFYVNQHSKPSTRRWHFVGTXXXXXXXXXXXXXXXXXXX-XXPIFGYGFAWY 61
             F S  EF+ FY+ +HS  ++RR HFVGT                      P+ GYGFAW 
Sbjct:     7 FSSFAEFYPFYLAEHSSSTSRRLHFVGTSLVIILLAFGVGSGRWGLLWLLPVAGYGFAWA 66

Query:    62 SHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKM 96
              HFF E N PATF HPF+S+L DF M+  ML GK+
Sbjct:    67 GHFFFEKNRPATFRHPFYSLLGDFVMYRDMLLGKV 101

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q885N1 PSPTO_1800 "Uncharacterized protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)]

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 43/95 (45%), Positives = 53/95 (55%)

Query:     3 FRSLDEFWAFYVNQHSKPSTRRWHFVGTXXXXXXXXXXXXXXXXXXX-XXPIFGYGFAWY 61
             F S  EF+ FY+ +HS  ++RR HFVGT                      P+ GYGFAW 
Sbjct:     7 FSSFAEFYPFYLAEHSSSTSRRLHFVGTSLVIFLLAFGVGSGRWGLLWLLPVAGYGFAWA 66

Query:    62 SHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKM 96
              HFF E N PATF HPF+S+L DF M+  ML GK+
Sbjct:    67 GHFFFEKNRPATFKHPFYSLLGDFVMYRDMLLGKV 101

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q4KGC0 PFL_1587 "Uncharacterized protein" [Pseudomonas protegens Pf-5 (taxid:220664)]

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 40/95 (42%), Positives = 52/95 (54%)

Query:     3 FRSLDEFWAFYVNQHSKPSTRRWHFVGTXXXXXXXXXXXXXXXX-XXXXXPIFGYGFAWY 61
             F S  EF+ +Y+++HS  + RR HF+GT                      PI GYGFAW 
Sbjct:     7 FNSFAEFYPYYLSEHSDSTCRRLHFIGTSLVIFILALAIGKGAWWLLLVLPIAGYGFAWV 66

Query:    62 SHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKM 96
              HFF E N PATF HP +S+L DF M+  M+ GK+
Sbjct:    67 GHFFFEKNRPATFQHPLYSLLGDFVMYRDMILGKV 101

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

DICTYBASE|DDB_G0275513 DDB_G0275513 "DUF962 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
 Identities = 35/95 (36%), Positives = 50/95 (52%)

Query:     3 FRSLDEFWAFYVNQHSKPSTRRWHFVGTXXXXXXXXXXXXXXXXXXXXXP-IFGYGFAWY 61
             + +  EF+ +Y+ +H+  + RR HFVGT                       +FGY FAW 
Sbjct:     8 YNNFKEFYPYYLKEHTNRTNRRLHFVGTTLGFLTIVYALLTGQYRYLLLALVFGYSFAWA 67

Query:    62 SHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKM 96
              HFF+E N PATF +P WS   D KM+  +L+GK+
Sbjct:    68 GHFFIEKNKPATFKYPIWSFRGDMKMYSSILSGKI 102

GO:0003674 "molecular_function" evidence=ND

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|Q8EGI7 SO_1615 "Uncharacterized protein" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 35/95 (36%), Positives = 49/95 (51%)

Query:     3 FRSLDEFWAFYVNQHSKPSTRRWHFVGTXXXXXXXXXXXXXXXX-XXXXXPIFGYGFAWY 61
             +RS  EF+ FY++QH     RR HF+G+                      P+ GYG AW 
Sbjct:     5 YRSFAEFYPFYLSQHQDRRCRRLHFIGSMIVLALLGAALITTHWWLLVLIPLVGYGLAWV 64

Query:    62 SHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKM 96
              HF  E N PATF +P +S++ D+ MF  +L GK+
Sbjct:    65 GHFVFERNRPATFQYPLYSLMGDWVMFAQILLGKI 99

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|SO_1615 SO_1615 "conserved hypothetical protein" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 35/95 (36%), Positives = 49/95 (51%)

Query:     3 FRSLDEFWAFYVNQHSKPSTRRWHFVGTXXXXXXXXXXXXXXXX-XXXXXPIFGYGFAWY 61
             +RS  EF+ FY++QH     RR HF+G+                      P+ GYG AW 
Sbjct:     5 YRSFAEFYPFYLSQHQDRRCRRLHFIGSMIVLALLGAALITTHWWLLVLIPLVGYGLAWV 64

Query:    62 SHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKM 96
              HF  E N PATF +P +S++ D+ MF  +L GK+
Sbjct:    65 GHFVFERNRPATFQYPLYSLMGDWVMFAQILLGKI 99

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q481Q5 CPS_2498 "Putative uncharacterized protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 34/95 (35%), Positives = 50/95 (52%)

Query:     3 FRSLDEFWAFYVNQHSKPSTRRWHFVGTXXXXXXXXXXXXXXXXXXX-XXPIFGYGFAWY 61
             + +  EF+ FY++QH+    RR HFVG+                      P+ GYGFAW 
Sbjct:     5 YNNFSEFYPFYLSQHTNLICRRLHFVGSCFILLLIFYVAMYGGFHLLWFIPVIGYGFAWM 64

Query:    62 SHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKM 96
              H+  E N PATF +P +S++ D+ MF  M+ GK+
Sbjct:    65 GHYIFEKNRPATFVYPIYSLIGDWVMFKDMVIGKI 99

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CPS_2498 CPS_2498 "conserved hypothetical protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 34/95 (35%), Positives = 50/95 (52%)

Query:     3 FRSLDEFWAFYVNQHSKPSTRRWHFVGTXXXXXXXXXXXXXXXXXXX-XXPIFGYGFAWY 61
             + +  EF+ FY++QH+    RR HFVG+                      P+ GYGFAW 
Sbjct:     5 YNNFSEFYPFYLSQHTNLICRRLHFVGSCFILLLIFYVAMYGGFHLLWFIPVIGYGFAWM 64

Query:    62 SHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKM 96
              H+  E N PATF +P +S++ D+ MF  M+ GK+
Sbjct:    65 GHYIFEKNRPATFVYPIYSLIGDWVMFKDMVIGKI 99


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.332   0.145   0.517    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      112        91   0.00091  102 3  12 21  0.39    29
                                                     29  0.39    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  525 (56 KB)
  Total size of DFA:  102 KB (2071 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  6.13u 0.20s 6.33t   Elapsed:  00:00:01
  Total cpu time:  6.13u 0.20s 6.33t   Elapsed:  00:00:01
  Start:  Fri May 10 01:28:31 2013   End:  Fri May 10 01:28:32 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00021463001	SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (112 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00021219001	RecName- Full=Uracil-DNA glycosylase; EC=3.2.2.-;; Excises uracil residues from the DNA which c [...] (328 aa)	•								0.499

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	112
pfam06127	95	pfam06127, DUF962, Protein of unknown function (DU	1e-32
COG4323	105	COG4323, COG4323, Predicted membrane protein [Func	4e-22

>gnl|CDD|191456 pfam06127, DUF962, Protein of unknown function (DUF962)

 Score =  109 bits (274), Expect = 1e-32
 Identities = 44/95 (46%), Positives = 62/95 (65%), Gaps = 1/95 (1%)

Query: 3  FRSLDEFWAFYVNQHSKPSTRRWHFVGTLISIFFLLLSVFF-SWCFLVFVPIFGYGFAWY 61
          F+S  EF+ FY+++HS P+ RR HF+GT + +  L+L +   +W  L+  P+ GYGFAW 
Sbjct: 1  FKSFAEFYPFYLSEHSNPTNRRLHFIGTPLVLLSLVLLLLRGNWWLLLAAPVAGYGFAWV 60

Query: 62 SHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKM 96
           HFF E N PATF +P WS+L D  M    LTG++
Sbjct: 61 GHFFFEKNRPATFKYPLWSLLGDPVMVLDELTGRL 95

This family consists of several eukaryotic and prokaryotic proteins of unknown function. The yeast protein YGL010W has been found to be non-essential for cell growth. Length = 95

>gnl|CDD|226773 COG4323, COG4323, Predicted membrane protein [Function unknown]

 Score = 83.0 bits (205), Expect = 4e-22
 Identities = 39/95 (41%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 3   FRSLDEFWAFYVNQHSKPSTRRWHFVGTLISIFFLLLSVF-FSWCFLVFVPIFGYGFAWY 61
           F+S  EF+ +Y+ +H+ P  RR H VG+ + +  L+L VF   W +L+  P+ GYGFAW 
Sbjct: 9   FKSFAEFYPYYLTEHANPVCRRLHVVGSSLVLVCLVLGVFRGDWRWLLAAPVIGYGFAWV 68

Query: 62  SHFFVEGNVPATFGHPFWSVLCDFKMFGLMLTGKM 96
            HF  E N PATF +P +S++ D+ M+   +TG++
Sbjct: 69  GHFVFEKNRPATFKYPVYSLMGDWVMWFDTVTGRI 103

Length = 105

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	112
COG4323	105	Predicted membrane protein [Function unknown]	100.0
PF06127	95	DUF962: Protein of unknown function (DUF962); Inte	100.0
COG4539	180	Predicted membrane protein [Function unknown]	98.61
KOG3292	196	consensus Predicted membrane protein [Function unk	97.53

>COG4323 Predicted membrane protein [Function unknown]

Probab=100.00  E-value=8.9e-53  Score=295.56  Aligned_cols=96  Identities=41%  Similarity=0.868  Sum_probs=91.8

Q ss_pred             CCCcHHHHHHHHHHhcCCcchhhHHhHhHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhhhhhhheeecCCCCCccchhHH
Q 033718            2 NFRSLDEFWAFYVNQHSKPSTRRWHFVGTLISIFFLLLSVF-FSWCFLVFVPIFGYGFAWYSHFFVEGNVPATFGHPFWS   80 (112)
Q Consensus         2 ~~~sf~eF~p~YL~eH~~~~~R~lH~iGt~l~~~~l~~~~~-~~~~~l~~~~v~GYg~AW~GHf~fEkNrPAtF~~P~~S   80 (112)
                      ||+||+|||||||.||+||+|||||++|++|++++++.++. +.|+|++++|++||||||+|||.||||||||||||+||
T Consensus         8 Rf~SFAeFYPyYl~EH~N~vcRRLH~vGs~LvlvcL~~~Vf~~~w~wllAapv~GYgFAWvGHFvFEKNRPATFkyPvyS   87 (105)
T COG4323           8 RFKSFAEFYPYYLTEHANPVCRRLHVVGSSLVLVCLVLGVFRGDWRWLLAAPVIGYGFAWVGHFVFEKNRPATFKYPVYS   87 (105)
T ss_pred             HhhhHHHhchHHHHhccchhHhhhhhhhhHHHHHHHHHHHHhcchHHHHHhhhhcccceeeeeeeeecCCCccccccHHH
Confidence            79999999999999999999999999999999999886554 47999999999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHHcCCCc
Q 033718           81 VLCDFKMFGLMLTGKMD   97 (112)
Q Consensus        81 l~~D~~M~~~~L~G~~~   97 (112)
                      ||+||+|++|..+||++
T Consensus        88 lMGDwvm~~d~~tGri~  104 (105)
T COG4323          88 LMGDWVMWFDTVTGRIK  104 (105)
T ss_pred             hhccceeeeehhccccc
Confidence            99999999999999985

>PF06127 DUF962: Protein of unknown function (DUF962); InterPro: IPR009305 This family consists of several eukaryotic and prokaryotic proteins of unknown function

Probab=100.00  E-value=5.9e-37  Score=212.11  Aligned_cols=94  Identities=38%  Similarity=0.680  Sum_probs=88.7

Q ss_pred             CCcHHHHHHHHHHhcCCcchhhHHhHhHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhhhhhhheeecCCCCCccchhHHh
Q 033718            3 FRSLDEFWAFYVNQHSKPSTRRWHFVGTLISIFFLLLSVFF-SWCFLVFVPIFGYGFAWYSHFFVEGNVPATFGHPFWSV   81 (112)
Q Consensus         3 ~~sf~eF~p~YL~eH~~~~~R~lH~iGt~l~~~~l~~~~~~-~~~~l~~~~v~GYg~AW~GHf~fEkNrPAtF~~P~~Sl   81 (112)
                      |+|++|+|++|+++||||+||++|++|+++++.++++.+.. +++++++++++||++||+||++|||||||+|++|+||+
T Consensus         1 ~~~~~~~~~~Y~~~H~~~~n~~lH~igvp~~~~~~~~~~~~~~~~~~l~~~~~g~~~q~~GH~~~E~~~Pa~~~~p~~sl   80 (95)
T PF06127_consen    1 MKSLEEFFAFYLSYHRNPINRALHFIGVPLIIFSLLLLLARIPWWLALAVFVVGWGLQFIGHFFFEKNKPAFFDNPLQSL   80 (95)
T ss_pred             CcCHHHHHHHHHHHcCCHhhHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHhHHHHHcCCCcchhchHHHH
Confidence            68999999999999999999999999999999988765544 68899999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHcCCC
Q 033718           82 LCDFKMFGLMLTGKM   96 (112)
Q Consensus        82 ~~D~~M~~~~L~G~~   96 (112)
                      ++|..|++++++||+
T Consensus        81 ~~~p~~~~~~l~~~~   95 (95)
T PF06127_consen   81 LIDPFFVWLELLFRL   95 (95)
T ss_pred             HHHHHHHHHHHhccC
Confidence            999999999999985

The yeast protein P25338 from SWISSPROT has been found to be non-essential for cell growth.

>COG4539 Predicted membrane protein [Function unknown]

Probab=98.61  E-value=1.6e-08  Score=77.80  Aligned_cols=97  Identities=20%  Similarity=0.336  Sum_probs=66.0

Q ss_pred             cHHHHHHHHHHhcCCcchhhHHhHhHHHHHHHHHHHH-------------------------------------------
Q 033718            5 SLDEFWAFYVNQHSKPSTRRWHFVGTLISIFFLLLSV-------------------------------------------   41 (112)
Q Consensus         5 sf~eF~p~YL~eH~~~~~R~lH~iGt~l~~~~l~~~~-------------------------------------------   41 (112)
                      +..+=+.+|-.-|+||+|-..|++|+++.+++..+.+                                           
T Consensus         3 ~Ls~~lsfYaaYH~nprNI~iH~i~IP~ills~avllhr~vi~l~~~~l~is~a~ll~va~~iFYl~Ldl~~Gll~~~ll   82 (180)
T COG4539           3 DLSDHLSFYAAYHHNPRNILIHFIGIPTILLSGAVLLHRPVIGLSNSKLQISPALLLSVAFSIFYLRLDLPFGLLMGVLL   82 (180)
T ss_pred             cHHHHHHHHHHHhcCCcceeeeeecchHHHHHHHHHhhcceeeecCCcceecHHHHHHHHHHHHheeeccchhHHHHHHH
Confidence            3455677888889999999999999998766432110                                           


Q ss_pred             -HHHH--------------HHHHHHHHhhhhhhhhhhheeecCCCCCccchhHHhh-hhHHHH-----HHHHcCCCcHHH
Q 033718           42 -FFSW--------------CFLVFVPIFGYGFAWYSHFFVEGNVPATFGHPFWSVL-CDFKMF-----GLMLTGKMDREI  100 (112)
Q Consensus        42 -~~~~--------------~~l~~~~v~GYg~AW~GHf~fEkNrPAtF~~P~~Sl~-~D~~M~-----~~~L~G~~~~~~  100 (112)
                       ...|              ..-+.++++||.+|++||=.|||.|||.-.+-.-|++ +..=.+     +.=+.|++++|+
T Consensus        83 ~l~~wi~~~l~a~~t~a~l~~~lglfvIgWI~QFVGHgvfEkRkPAlvDnL~qsLviaPlF~l~Et~f~lG~~p~l~~ev  162 (180)
T COG4539          83 LLLVWILLALAAHRTDAWLKQGLGLFVIGWIFQFVGHGVFEKRKPALVDNLVQSLVIAPLFILAETLFKLGLRPRLKAEV  162 (180)
T ss_pred             HHHHHHHHHHHHhhHHHHHhcCceeeeehHHHHhccccccccCCchHHHHHHhhHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence             0011              1124567899999999998899999998887777643 333222     233567777776


Q ss_pred             H
Q 033718          101 K  101 (112)
Q Consensus       101 ~  101 (112)
                      |
T Consensus       163 ~  163 (180)
T COG4539         163 E  163 (180)
T ss_pred             H
Confidence            4

>KOG3292 consensus Predicted membrane protein [Function unknown]

Probab=97.53  E-value=0.00023  Score=55.49  Aligned_cols=45  Identities=16%  Similarity=0.135  Sum_probs=37.2

Q ss_pred             HHHHHHhhhhhhhhhhheeecCCCCCccchhHH-hhhhHHHHHHHH
Q 033718           48 LVFVPIFGYGFAWYSHFFVEGNVPATFGHPFWS-VLCDFKMFGLML   92 (112)
Q Consensus        48 l~~~~v~GYg~AW~GHf~fEkNrPAtF~~P~~S-l~~D~~M~~~~L   92 (112)
                      .++.-+++|..|++||=.|||.+||...+-+.| +|+.+=.+.+.+
T Consensus       112 g~~s~licWi~QFvGHGvFEKR~PALlDNLlQsl~maP~Fv~lE~l  157 (196)
T KOG3292|consen  112 GLASQLICWIGQFVGHGVFEKRAPALLDNLLQSLLMAPFFVLLEVL  157 (196)
T ss_pred             HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHhHHHHHHHHH
Confidence            345557999999999999999999999999999 567776666655

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00