Citrus Sinensis ID: 033814

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-
Protein Sequence
MEFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELGVVASYSGQGRIADFGFRNPKWVDGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPD
Secondary Structure (PSIPRED)
ccEEEEEEEEEEccccccccEEEEEEEEEccccccccccccccccccEEEEEEccEEcccccccccEEEEEEEEEccccccccccccEEEEEEEEccccEEEEEEEccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEEEEcccccccccEEEEEEEEcccccccccccccHHccEEEEEcccccEccccccccccEccEEEEEcccccccccccccEEEEEEcccccEEHHHccccccc
Coil and Loop (DISEMBL)
MEFFEYVEAVKLtgdlnvpagevtfrakigkgsrlpnrgkfpdelgvvasysgqgriadfgfrnpkwvdgellqlngkgmgpyvkgadlgflyvvpeQSFLVLFNRLKLPD
Flexible Loop (DISEMBL)
MEFFEYVEAVkltgdlnvpagevtfrakigkgsrlpnrgkfpdELGVVASYSGQGRIADFGFRNPKWVDGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPD
Low Complexity Region (SEG)
MEFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELGVVASYSGQGRIADFGFRNPKWVDGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPD
Disordered region (IsUnstruct)
**FFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRL**RGKFPDELGVVASYSGQGRIADFGFRNPKWVDGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRL****
Disordered Region (DISOPRED)
*EFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELGVVASYSGQGRIADFGFRNPKWVDGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLKL**
Disordered Region (DISEMBL)
MEFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELGVVASYSGQGRIADFGFRNPKWVDGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPD
Disordered Region (DISPRO)
MEFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELGVVASYSGQGRIADFGFRNPKWVDGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLKL**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELGVVASYSGQGRIADFGFRNPKWVDGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	111	2.2.26 [Sep-21-2011]
Q93YW0	684	Protein EXECUTER 1, chlor	no	no	0.945	0.153	0.618	1e-31

>sp|Q93YW0|EXEC1_ARATH Protein EXECUTER 1, chloroplastic OS=Arabidopsis thaliana GN=EX1 PE=1 SV=1

 Score =  134 bits (338), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/110 (61%), Positives = 85/110 (77%), Gaps = 5/110 (4%)

Query: 1   MEFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELGVVASYSGQGRIADF 60
           +EF+EYVEAVKLTGD  VPAG+V FRAKIG+   LP++G  P+E GV+A Y GQGR+AD 
Sbjct: 577 IEFYEYVEAVKLTGDPYVPAGKVAFRAKIGRRYELPHKGLIPEEFGVIARYKGQGRLADP 636

Query: 61  GFRNPKWVDGELLQLNGKGMGPYVKGAD-LGFLYVVPEQSFLVLFNRLKL 109
           GFRNP+WVDGEL+ L+GK    YVKG   +GF+Y  PE  F++ FNRL+L
Sbjct: 637 GFRNPRWVDGELVILDGK----YVKGGPVVGFVYWAPEYHFVMFFNRLRL 682

Enables higher plants to perceive singlet oxygen as a stress signal that activates a genetically determined stress response program.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	111
297733793	656	unnamed protein product [Vitis vinifera]	1.0	0.169	0.909	2e-54
359491590	648	PREDICTED: protein EXECUTER 1, chloropla	1.0	0.171	0.909	3e-54
255540691	658	EXECUTER1 protein, chloroplast precursor	1.0	0.168	0.900	2e-53
147839112	116	hypothetical protein VITISV_012750 [Viti	1.0	0.956	0.909	1e-52
356507232	632	PREDICTED: protein EXECUTER 1, chloropla	0.981	0.172	0.862	8e-52
356518979	634	PREDICTED: protein EXECUTER 1, chloropla	0.981	0.171	0.853	1e-51
224119314	166	predicted protein [Populus trichocarpa]	1.0	0.668	0.891	2e-51
357462003	630	Protein EXECUTER [Medicago truncatula] g	1.0	0.176	0.873	2e-50
449518939	657	PREDICTED: protein EXECUTER 1, chloropla	1.0	0.168	0.846	6e-50
449441021	609	PREDICTED: protein EXECUTER 1, chloropla	1.0	0.182	0.846	7e-50

>gi|297733793|emb|CBI15040.3| unnamed protein product [Vitis vinifera]

 Score =  215 bits (548), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 101/111 (90%), Positives = 110/111 (99%)

Query: 1   MEFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELGVVASYSGQGRIADF 60
           +EFFEYVEAVKLTGDLNVPAG+VTFRAKIGKGSR+PNRG +PDELGVVASYSGQGRIA+F
Sbjct: 546 VEFFEYVEAVKLTGDLNVPAGQVTFRAKIGKGSRIPNRGMYPDELGVVASYSGQGRIAEF 605

Query: 61  GFRNPKWVDGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPD 111
           GFRNP+WVDGELLQL+GKGMGPYV+GADLGFLYVVPEQSFLVLFNRLKLP+
Sbjct: 606 GFRNPQWVDGELLQLSGKGMGPYVRGADLGFLYVVPEQSFLVLFNRLKLPE 656

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491590|ref|XP_002279734.2| PREDICTED: protein EXECUTER 1, chloroplastic [Vitis vinifera]

 Score =  215 bits (547), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 101/111 (90%), Positives = 110/111 (99%)

Query: 1   MEFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELGVVASYSGQGRIADF 60
           +EFFEYVEAVKLTGDLNVPAG+VTFRAKIGKGSR+PNRG +PDELGVVASYSGQGRIA+F
Sbjct: 538 VEFFEYVEAVKLTGDLNVPAGQVTFRAKIGKGSRIPNRGMYPDELGVVASYSGQGRIAEF 597

Query: 61  GFRNPKWVDGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPD 111
           GFRNP+WVDGELLQL+GKGMGPYV+GADLGFLYVVPEQSFLVLFNRLKLP+
Sbjct: 598 GFRNPQWVDGELLQLSGKGMGPYVRGADLGFLYVVPEQSFLVLFNRLKLPE 648

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255540691|ref|XP_002511410.1| EXECUTER1 protein, chloroplast precursor, putative [Ricinus communis] gi|223550525|gb|EEF52012.1| EXECUTER1 protein, chloroplast precursor, putative [Ricinus communis]

 Score =  213 bits (541), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 100/111 (90%), Positives = 108/111 (97%)

Query: 1   MEFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELGVVASYSGQGRIADF 60
           +EFFEYVEAVKLTGDLNVPAG+VTFRAKIGKGSR PNRG +PDELGVVASY GQGRIA+F
Sbjct: 548 VEFFEYVEAVKLTGDLNVPAGQVTFRAKIGKGSRNPNRGMYPDELGVVASYKGQGRIAEF 607

Query: 61  GFRNPKWVDGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPD 111
           GFRNP+WVDGELLQLNGKG+GPYVKGADLGFLYV+PEQSFLVLFNRLKLP+
Sbjct: 608 GFRNPQWVDGELLQLNGKGLGPYVKGADLGFLYVIPEQSFLVLFNRLKLPE 658

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147839112|emb|CAN68093.1| hypothetical protein VITISV_012750 [Vitis vinifera]

 Score =  209 bits (533), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 101/111 (90%), Positives = 110/111 (99%)

Query: 1   MEFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELGVVASYSGQGRIADF 60
           +EFFEYVEAVKLTGDLNVPAG+VTFRAKIGKGSR+PNRG +PDELGVVASYSGQGRIA+F
Sbjct: 6   VEFFEYVEAVKLTGDLNVPAGQVTFRAKIGKGSRIPNRGMYPDELGVVASYSGQGRIAEF 65

Query: 61  GFRNPKWVDGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPD 111
           GFRNP+WVDGELLQL+GKGMGPYV+GADLGFLYVVPEQSFLVLFNRLKLP+
Sbjct: 66  GFRNPQWVDGELLQLSGKGMGPYVRGADLGFLYVVPEQSFLVLFNRLKLPE 116

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356507232|ref|XP_003522373.1| PREDICTED: protein EXECUTER 1, chloroplastic-like [Glycine max]

 Score =  207 bits (526), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 94/109 (86%), Positives = 105/109 (96%)

Query: 3   FFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELGVVASYSGQGRIADFGF 62
           FFEYVEAVKLTGDLNVPAG+VTFRAKIG+G+R  NRG +PD+LGVVASY GQGRIAD+G+
Sbjct: 524 FFEYVEAVKLTGDLNVPAGQVTFRAKIGRGNRNTNRGMYPDDLGVVASYKGQGRIADYGY 583

Query: 63  RNPKWVDGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPD 111
           RNPKWV+GELLQLNGKGMGPY+KGADLGFLYVVPEQSFLVLF+RLKLP+
Sbjct: 584 RNPKWVEGELLQLNGKGMGPYMKGADLGFLYVVPEQSFLVLFHRLKLPE 632

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518979|ref|XP_003528152.1| PREDICTED: protein EXECUTER 1, chloroplastic-like [Glycine max]

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 93/109 (85%), Positives = 105/109 (96%)

Query: 3   FFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELGVVASYSGQGRIADFGF 62
           FFEYVEAVKLTGDLNVPAG VTFRAKIG+G+R+ N+G +PD+LGVVASY GQGRIAD+G+
Sbjct: 526 FFEYVEAVKLTGDLNVPAGLVTFRAKIGRGNRITNQGMYPDDLGVVASYKGQGRIADYGY 585

Query: 63  RNPKWVDGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPD 111
           RNPKWV+GELLQLNGKGMGPY+KGADLGFLYVVPEQSFLVLF+RLKLP+
Sbjct: 586 RNPKWVEGELLQLNGKGMGPYMKGADLGFLYVVPEQSFLVLFHRLKLPE 634

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224119314|ref|XP_002318040.1| predicted protein [Populus trichocarpa] gi|222858713|gb|EEE96260.1| predicted protein [Populus trichocarpa]

 Score =  205 bits (522), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 99/111 (89%), Positives = 108/111 (97%)

Query: 1   MEFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELGVVASYSGQGRIADF 60
           +EFFEYVEAVKLTGDLNVPAG+VTFRA+IGKGSR  NRGK+PDELGVVASY GQGRIA+F
Sbjct: 56  VEFFEYVEAVKLTGDLNVPAGQVTFRARIGKGSRNSNRGKYPDELGVVASYKGQGRIAEF 115

Query: 61  GFRNPKWVDGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPD 111
           GF+NP+WVDGELLQLNG+G+GPYVKGADLGFLYVVPEQSFLVLFNRLKLPD
Sbjct: 116 GFKNPQWVDGELLQLNGRGIGPYVKGADLGFLYVVPEQSFLVLFNRLKLPD 166

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357462003|ref|XP_003601283.1| Protein EXECUTER [Medicago truncatula] gi|355490331|gb|AES71534.1| Protein EXECUTER [Medicago truncatula]

 Score =  202 bits (515), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 97/111 (87%), Positives = 104/111 (93%)

Query: 1   MEFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELGVVASYSGQGRIADF 60
           +EFFEYVEAVKLTGDLNVPAG+VTFRAKIGK +R  NRG +PDELGV ASY GQGRIADF
Sbjct: 520 IEFFEYVEAVKLTGDLNVPAGQVTFRAKIGKVNRNANRGLYPDELGVNASYKGQGRIADF 579

Query: 61  GFRNPKWVDGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPD 111
           GFRNPKWVDGELLQLNGKGMGP++KGADLGFLY VPEQSFLVLFNRLKLP+
Sbjct: 580 GFRNPKWVDGELLQLNGKGMGPHMKGADLGFLYAVPEQSFLVLFNRLKLPE 630

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449518939|ref|XP_004166493.1| PREDICTED: protein EXECUTER 1, chloroplastic-like [Cucumis sativus]

 Score =  201 bits (510), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 94/111 (84%), Positives = 105/111 (94%)

Query: 1   MEFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELGVVASYSGQGRIADF 60
           +EFFEYVEAVKLTGDLN+PAG+VTFRAKIG+G R  NRG +PDELGVVASY GQGRIA+F
Sbjct: 547 IEFFEYVEAVKLTGDLNLPAGQVTFRAKIGRGIRNANRGIYPDELGVVASYKGQGRIAEF 606

Query: 61  GFRNPKWVDGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPD 111
           GFRNP+W+DGELLQLNG+G+GPYVKGADLGFLYVVPE SFLVLFNRLKLP+
Sbjct: 607 GFRNPQWIDGELLQLNGRGIGPYVKGADLGFLYVVPEHSFLVLFNRLKLPE 657

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441021|ref|XP_004138282.1| PREDICTED: protein EXECUTER 1, chloroplastic-like [Cucumis sativus]

 Score =  200 bits (509), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 94/111 (84%), Positives = 105/111 (94%)

Query: 1   MEFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELGVVASYSGQGRIADF 60
           +EFFEYVEAVKLTGDLN+PAG+VTFRAKIG+G R  NRG +PDELGVVASY GQGRIA+F
Sbjct: 499 IEFFEYVEAVKLTGDLNLPAGQVTFRAKIGRGIRNANRGIYPDELGVVASYKGQGRIAEF 558

Query: 61  GFRNPKWVDGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPD 111
           GFRNP+W+DGELLQLNG+G+GPYVKGADLGFLYVVPE SFLVLFNRLKLP+
Sbjct: 559 GFRNPQWIDGELLQLNGRGIGPYVKGADLGFLYVVPEHSFLVLFNRLKLPE 609

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	111
TAIR|locus:2196889	651	EX2 "EXECUTER 2" [Arabidopsis	1.0	0.170	0.792	3.8e-46
TAIR|locus:2134168	684	EX1 "EXECUTER1" [Arabidopsis t	0.945	0.153	0.618	1e-30
UNIPROTKB|G4MPV5	642	MGG_09240 "F-box domain-contai	0.666	0.115	0.354	0.00014

TAIR|locus:2196889 EX2 "EXECUTER 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
 Identities = 88/111 (79%), Positives = 103/111 (92%)

Query:     1 MEFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELGVVASYSGQGRIADF 60
             +EFFEYVEAVKLTGD NVPAG+VTFRA+IG GSR+ N G FP+ELGV+ASY GQG+IADF
Sbjct:   541 IEFFEYVEAVKLTGDPNVPAGQVTFRARIGNGSRMTNHGLFPEELGVLASYRGQGKIADF 600

Query:    61 GFRNPKWVDGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPD 111
             GF+ P+WV+G+LL+LNGKGMGPYVKGADLGFLY+ PEQSFLVLFNRL+LP+
Sbjct:   601 GFKKPRWVEGKLLKLNGKGMGPYVKGADLGFLYIGPEQSFLVLFNRLRLPE 651

GO:0003677 "DNA binding" evidence=IEA

GO:0004518 "nuclease activity" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0000304 "response to singlet oxygen" evidence=IGI

GO:0042651 "thylakoid membrane" evidence=IDA

GO:0010343 "singlet oxygen-mediated programmed cell death" evidence=IGI

TAIR|locus:2134168 EX1 "EXECUTER1" [Arabidopsis thaliana (taxid:3702)]

 Score = 346 (126.9 bits), Expect = 1.0e-30, P = 1.0e-30
 Identities = 68/110 (61%), Positives = 85/110 (77%)

Query:     1 MEFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELGVVASYSGQGRIADF 60
             +EF+EYVEAVKLTGD  VPAG+V FRAKIG+   LP++G  P+E GV+A Y GQGR+AD 
Sbjct:   577 IEFYEYVEAVKLTGDPYVPAGKVAFRAKIGRRYELPHKGLIPEEFGVIARYKGQGRLADP 636

Query:    61 GFRNPKWVDGELLQLNGKGMGPYVKGADL-GFLYVVPEQSFLVLFNRLKL 109
             GFRNP+WVDGEL+ L+GK    YVKG  + GF+Y  PE  F++ FNRL+L
Sbjct:   637 GFRNPRWVDGELVILDGK----YVKGGPVVGFVYWAPEYHFVMFFNRLRL 682

GO:0003677 "DNA binding" evidence=IEA

GO:0004518 "nuclease activity" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0000304 "response to singlet oxygen" evidence=IGI

GO:0042651 "thylakoid membrane" evidence=IDA

GO:0000302 "response to reactive oxygen species" evidence=RCA

GO:0010039 "response to iron ion" evidence=RCA

GO:0055072 "iron ion homeostasis" evidence=RCA

GO:0010343 "singlet oxygen-mediated programmed cell death" evidence=IGI

UNIPROTKB|G4MPV5 MGG_09240 "F-box domain-containing protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 103 (41.3 bits), Expect = 0.00014, P = 0.00014
 Identities = 28/79 (35%), Positives = 44/79 (55%)

Query:     7 VEAVKLTGDLNVPAGEVTFRAK-IGKGSRLPNRGKFP-DELGVVASYSGQGRIADFGFRN 64
             +EA+KLTGD NVP GE TF A+ +G G  +    + P     VV S   +G +A  GF  
Sbjct:   545 LEAIKLTGDANVPRGEPTFVAEDLGPGGFVTVIEEKPFTGCRVVRS---KGHVAQSGFNL 601

Query:    65 PKWVDGELLQLNGKGMGPY 83
              K+++ +L+ ++   +  Y
Sbjct:   602 DKYIESQLIMISHDRLAQY 620


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.145   0.437    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      111       111   0.00091  102 3  11 22  0.47    30
                                                     29  0.42    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  499 (53 KB)
  Total size of DFA:  105 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.10u 0.16s 11.26t   Elapsed:  00:00:00
  Total cpu time:  11.10u 0.16s 11.26t   Elapsed:  00:00:00
  Start:  Fri May 10 04:47:40 2013   End:  Fri May 10 04:47:40 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00016102001 SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (656 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	111
pfam12014	138	pfam12014, DUF3506, Domain of unknown function (DU	9e-38

>gnl|CDD|192915 pfam12014, DUF3506, Domain of unknown function (DUF3506)

 Score =  123 bits (311), Expect = 9e-38
 Identities = 54/79 (68%), Positives = 62/79 (78%), Gaps = 2/79 (2%)

Query: 2   EFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLP--NRGKFPDELGVVASYSGQGRIAD 59
           EF+EYVEA+KLTGD NVP G+VTFRAKIGKG  +     G FP+ELGV+    GQG IAD
Sbjct: 60  EFYEYVEAIKLTGDPNVPRGQVTFRAKIGKGGLVRVAEEGLFPEELGVIRVVKGQGHIAD 119

Query: 60  FGFRNPKWVDGELLQLNGK 78
            GFRNP+WVDGELL L+GK
Sbjct: 120 PGFRNPRWVDGELLLLSGK 138

This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is typically between 131 to 148 amino acids in length. This domain has a conserved KLTGD sequence motif. Length = 138

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	111
PF12014	134	DUF3506: Domain of unknown function (DUF3506); Int	100.0

>PF12014 DUF3506: Domain of unknown function (DUF3506); InterPro: IPR021894 This presumed domain is functionally uncharacterised

Probab=100.00  E-value=2.9e-35  Score=217.24  Aligned_cols=74  Identities=53%  Similarity=0.809  Sum_probs=68.4

Q ss_pred             CceeeEEEEEEeeCCCCCcCeeEEEEEE-cCCCccCCCCCCCCCCCCcceE-EEeeeEEcCCCCCCCceeeeEEEEEcC
Q 033814            1 MEFFEYVEAVKLTGDLNVPAGEVTFRAK-IGKGSRLPNRGKFPDELGVVAS-YSGQGRIADFGFRNPKWVDGELLQLNG   77 (111)
Q Consensus         1 ~~~~e~LeAvKLTGDpNVPrGevTf~A~-l~~~~~~~~~g~~p~e~~~~ar-~~g~G~VA~~GF~~p~~i~~~Lilis~   77 (111)
                      ++|+|+|||||||||||||||||||+|+ |++.+++   +++.++++.|+| ||||||||++||+|++||+|||++||+
T Consensus        59 ~~~~~~leAiKLTGDpNVPrGevtF~A~DiG~~~~i---~~a~~~~f~G~r~vk~~G~vA~~GF~~~~~id~eLilis~  134 (134)
T PF12014_consen   59 REFRGRLEAIKLTGDPNVPRGEVTFRADDIGPGGRI---RVAHEGPFPGARRVKGQGHVAEPGFRNDKWIDGELILISG  134 (134)
T ss_pred             ccccceEEEEEecCCCCCcCccEEEEecccCCCccc---ccccCCCCCceEEEecCCeEcCcCcCCCcceeeEEEEecC
Confidence            3699999999999999999999999999 9999998   566667777777 999999999999999999999999995

This domain is found in eukaryotes. This domain is typically between 131 to 148 amino acids in length. This domain has a conserved KLTGD sequence motif.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00