Citrus Sinensis ID: 033881

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------11
Protein Sequence
MAVAMGSASVHLAVQICCNNEFKANAAFVTGSPRFGNKPLCCPARRRFSSSATRIIPRASSATAVEDGSNGDTDTIPTPKVIIDLDSDPDATIVEITFGDRLGALLDTV
Secondary Structure (PSIPRED)
ccEEccccccccEEEEEcccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccEEEEccccccccEEEEEEccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHcccccccccccccccccHHccccccccccccccccccccccccEEEccccccHHcccccccccccccccEEEEEcccccccEEEEEEccHHHHHHHccc
Coil and Loop (DISEMBL)
MAVAMGSASVHLAVQICCNnefkanaafvtgsprfgnkplccparrrfsssatriiprassatavedgsngdtdtiptpkviidldsdpdativeITFGDRLGALLDTV
Flexible Loop (DISEMBL)
MAVAMGSASVHLAVQICCNNEFKANAAFVTGSPRFGNKPLCCPARRRfsssatriiprassatavedgsngdtdtiptpkviidldsdpdATIVEITFGDRLGALLDTV
Low Complexity Region (SEG)
MAVAMGSASVHLAVQICCNNEFKANAAFVTGSPRFGNKPLCCPARRRFSSSATRIIPRASSATAVEDGSNGDTDTIPTPKVIIDLDSDPDATIVEITFGDRLGALLDTV
Disordered region (IsUnstruct)
********SVHLAVQICCNNEFKANAAFVTGSPRFGNKPLCCPAR**********************************KVIIDLDSDPDATIVEITFGDRLGAL****
Disordered Region (DISOPRED)
*A*****ASVHLAVQICCNNEFKANAAFVTGSPRFGNKPLCCPARRRFSSSATRII*******************IPTPKVIIDLDSDPDATIVEITFGDRLGALLDTV
Disordered Region (DISEMBL)
*********VHLAVQICCNNEFKANAAFVTGSPRFGNKPLCCPARRRFSSSATRIIPR*************DTDTIPTPKVIIDLDSDPDATIVEITFGDRLGALLDTV
Disordered Region (DISPRO)
*************VQICCNNEFKANAAFVTGSPRFGNKPLCCPARRRFSSSATRIIPRASS************DTIPTPKVIIDLDSDPDATIVEITFGDRLGALLDT*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAVAMGSASVHLAVQICCNNEFKANAAFVTGSPRFGNKPLCCPARRRFSSSATRIIPRASSATAVEDGSNGDTDTIPTPKVIIDLDSDPDATIVEITFGDRLGALLDTV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	109	2.2.26 [Sep-21-2011]
Q0J709	283	Unknown protein DS12 from	yes	no	0.568	0.219	0.746	6e-19
P83643	283	Unknown protein DS12 from	N/A	no	0.568	0.219	0.746	6e-19

>sp|Q0J709|UP12_ORYSJ Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0242700 PE=2 SV=2

 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 47/63 (74%), Positives = 54/63 (85%), Gaps = 1/63 (1%)

Query: 47  RFSSSATRIIPRASSATAVEDGSNGDTDTIPTPKVIIDLDSDPDATIVEITFGDRLGALL 106
           R SS A R+ PRA+S+ AVEDGS+ +TDT+PTPKVIID DSDPDATIVEIT GDRLG LL
Sbjct: 46  RLSSPAVRV-PRAASSAAVEDGSSSNTDTVPTPKVIIDQDSDPDATIVEITLGDRLGDLL 104

Query: 107 DTV 109
           DT+
Sbjct: 105 DTM 107

Oryza sativa subsp. japonica (taxid: 39947)

>sp|P83643|UP12_ORYSI Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_027381 PE=1 SV=2

 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 47/63 (74%), Positives = 54/63 (85%), Gaps = 1/63 (1%)

Query: 47  RFSSSATRIIPRASSATAVEDGSNGDTDTIPTPKVIIDLDSDPDATIVEITFGDRLGALL 106
           R SS A R+ PRA+S+ AVEDGS+ +TDT+PTPKVIID DSDPDATIVEIT GDRLG LL
Sbjct: 46  RLSSPAVRV-PRAASSAAVEDGSSSNTDTVPTPKVIIDQDSDPDATIVEITLGDRLGDLL 104

Query: 107 DTV 109
           DT+
Sbjct: 105 DTM 107

Oryza sativa subsp. indica (taxid: 39946)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	109
224110036	279	predicted protein [Populus trichocarpa]	0.788	0.308	0.597	1e-22
358249276	294	uncharacterized protein LOC100803191 [Gl	0.944	0.350	0.508	3e-22
224097482	203	predicted protein [Populus trichocarpa]	0.651	0.349	0.746	1e-21
356523245	291	PREDICTED: unknown protein DS12 from 2D-	0.944	0.353	0.512	1e-21
255636370	148	unknown [Glycine max]	0.944	0.695	0.512	1e-21
449439743	292	PREDICTED: unknown protein DS12 from 2D-	0.577	0.215	0.841	2e-21
449533134	224	PREDICTED: unknown protein DS12 from 2D-	0.577	0.281	0.841	2e-21
388515911	290	unknown [Lotus japonicus]	0.981	0.368	0.5	6e-21
255564051	282	amino acid binding protein, putative [Ri	0.944	0.365	0.517	4e-20
147800453	453	hypothetical protein VITISV_038929 [Viti	0.651	0.156	0.693	2e-19

>gi|224110036|ref|XP_002315393.1| predicted protein [Populus trichocarpa] gi|222864433|gb|EEF01564.1| predicted protein [Populus trichocarpa]

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 65/97 (67%), Gaps = 11/97 (11%)

Query: 24  ANAAFVTGSPRFGNKPLC-----------CPARRRFSSSATRIIPRASSATAVEDGSNGD 72
           AN AF   + + G  PLC           C  RRR  SS T IIP ASSA  +EDGS  D
Sbjct: 8   ANLAFQFNNVKVGENPLCFGLAPTQLPYLCKERRRLPSSRTIIIPGASSAPTIEDGSQND 67

Query: 73  TDTIPTPKVIIDLDSDPDATIVEITFGDRLGALLDTV 109
           TD IPTPKVIID D+DPDAT+VE+TFGDRLGALLDT+
Sbjct: 68  TDAIPTPKVIIDQDADPDATVVEVTFGDRLGALLDTM 104

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249276|ref|NP_001240278.1| uncharacterized protein LOC100803191 [Glycine max] gi|255644481|gb|ACU22744.1| unknown [Glycine max]

 Score =  108 bits (271), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/122 (50%), Positives = 75/122 (61%), Gaps = 19/122 (15%)

Query: 1   MAVAMGSASVHLAVQ-------------ICCNNEFKANAAFVTGSPRFGNKPLCCPARRR 47
           +A+A+ SA +H +               IC    FKA++ F         KP C     R
Sbjct: 3   VAMAVWSAGLHFSAATKPHSSLRPLEKIICTAPFFKASSGFA------ATKPFCILNTTR 56

Query: 48  FSSSATRIIPRASSATAVEDGSNGDTDTIPTPKVIIDLDSDPDATIVEITFGDRLGALLD 107
            S S T IIPRA+  T VEDG++G+TDTIPTP VIID DSDPDAT+VEITFGDRLGALLD
Sbjct: 57  LSYSGTTIIPRAAPVTDVEDGNHGETDTIPTPVVIIDQDSDPDATVVEITFGDRLGALLD 116

Query: 108 TV 109
           T+
Sbjct: 117 TM 118

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224097482|ref|XP_002310954.1| predicted protein [Populus trichocarpa] gi|222850774|gb|EEE88321.1| predicted protein [Populus trichocarpa]

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/71 (74%), Positives = 57/71 (80%)

Query: 39  PLCCPARRRFSSSATRIIPRASSATAVEDGSNGDTDTIPTPKVIIDLDSDPDATIVEITF 98
           P  C  RRR SSS T II +ASSA  VEDGS  +TD IPTPKVIID DSDPDAT+VEITF
Sbjct: 34  PFLCKERRRLSSSRTIIIVQASSAPTVEDGSQNETDAIPTPKVIIDQDSDPDATVVEITF 93

Query: 99  GDRLGALLDTV 109
           GDRLGALLDT+
Sbjct: 94  GDRLGALLDTM 104

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356523245|ref|XP_003530251.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic-like [Glycine max]

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 73/119 (61%), Gaps = 16/119 (13%)

Query: 1   MAVAMGSASVH----------LAVQICCNNEFKANAAFVTGSPRFGNKPLCCPARRRFSS 50
           +A+A+ SA +H          L   IC     KA++ F         KP C     R S 
Sbjct: 3   LAMAVWSAGLHFSAARSSLRPLEKTICTAPFLKASSGFA------ATKPFCILNTTRLSY 56

Query: 51  SATRIIPRASSATAVEDGSNGDTDTIPTPKVIIDLDSDPDATIVEITFGDRLGALLDTV 109
           S T IIPRA+  T V+DG+ G+TDTIPTP VIID DSDPDAT+VEITFGDRLGALLDT+
Sbjct: 57  SGTTIIPRAAPVTDVKDGNQGETDTIPTPVVIIDQDSDPDATVVEITFGDRLGALLDTM 115

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255636370|gb|ACU18524.1| unknown [Glycine max]

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 73/119 (61%), Gaps = 16/119 (13%)

Query: 1   MAVAMGSASVH----------LAVQICCNNEFKANAAFVTGSPRFGNKPLCCPARRRFSS 50
           +A+A+ SA +H          L   IC     KA++ F         KP C     R S 
Sbjct: 3   LAMAVWSAGLHFSAARSSLRPLEKTICTAPFLKASSGFA------ATKPFCILNTTRLSY 56

Query: 51  SATRIIPRASSATAVEDGSNGDTDTIPTPKVIIDLDSDPDATIVEITFGDRLGALLDTV 109
           S T IIPRA+  T V+DG+ G+TDTIPTP VIID DSDPDAT+VEITFGDRLGALLDT+
Sbjct: 57  SGTTIIPRAAPVTDVKDGNQGETDTIPTPVVIIDQDSDPDATVVEITFGDRLGALLDTM 115

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439743|ref|XP_004137645.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic-like [Cucumis sativus]

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/63 (84%), Positives = 57/63 (90%)

Query: 47  RFSSSATRIIPRASSATAVEDGSNGDTDTIPTPKVIIDLDSDPDATIVEITFGDRLGALL 106
           R+SSS  + IPRASSATAVEDGSNGDTDTIPTP VIID DSD DAT+VEITFGDRLGALL
Sbjct: 54  RWSSSNMKSIPRASSATAVEDGSNGDTDTIPTPIVIIDQDSDQDATVVEITFGDRLGALL 113

Query: 107 DTV 109
           DT+
Sbjct: 114 DTM 116

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449533134|ref|XP_004173532.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic-like, partial [Cucumis sativus]

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/63 (84%), Positives = 57/63 (90%)

Query: 47  RFSSSATRIIPRASSATAVEDGSNGDTDTIPTPKVIIDLDSDPDATIVEITFGDRLGALL 106
           R+SSS  + IPRASSATAVEDGSNGDTDTIPTP VIID DSD DAT+VEITFGDRLGALL
Sbjct: 54  RWSSSNMKSIPRASSATAVEDGSNGDTDTIPTPIVIIDQDSDQDATVVEITFGDRLGALL 113

Query: 107 DTV 109
           DT+
Sbjct: 114 DTM 116

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388515911|gb|AFK46017.1| unknown [Lotus japonicus]

 Score =  104 bits (260), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/116 (50%), Positives = 73/116 (62%), Gaps = 9/116 (7%)

Query: 1   MAVAMGSASVHLAVQICCNNEFKANAAFVTGSPRFG-------NKPLCCPARRRFSSSAT 53
           MAVAM + S  L + +C +N  +A    + G+P           KP     + R SSS  
Sbjct: 1   MAVAMAACS--LGLHLCADNSLRALEKTIWGAPVLKVSSISDTTKPCYILHKTRLSSSRI 58

Query: 54  RIIPRASSATAVEDGSNGDTDTIPTPKVIIDLDSDPDATIVEITFGDRLGALLDTV 109
            IIPRA++ T VE G+  +TDT+PTP VIID DSD DAT+VEITFGDRLGALLDT+
Sbjct: 59  TIIPRATAVTDVEGGNQDETDTVPTPVVIIDQDSDTDATVVEITFGDRLGALLDTM 114

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255564051|ref|XP_002523024.1| amino acid binding protein, putative [Ricinus communis] gi|223537746|gb|EEF39366.1| amino acid binding protein, putative [Ricinus communis]

 Score =  102 bits (253), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/112 (51%), Positives = 74/112 (66%), Gaps = 9/112 (8%)

Query: 1   MAVAMGSASVHLAVQICCNNEFKANAAFVTGSPRFGNKPLCCPARRRFSSSATR---IIP 57
           M VAM  +S  L++  C    +K           F   PL    ++   ++ +R   IIP
Sbjct: 1   MVVAMAFSS--LSLHYC----YKGKVVEKYSCFAFHTTPLHILCKQTAGTTGSRRTIIIP 54

Query: 58  RASSATAVEDGSNGDTDTIPTPKVIIDLDSDPDATIVEITFGDRLGALLDTV 109
           +ASSATAVEDGS+ +TD++PTPKVIID DSDPDAT+VEITFGDRLGALLDT+
Sbjct: 55  QASSATAVEDGSHNETDSVPTPKVIIDQDSDPDATVVEITFGDRLGALLDTM 106

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147800453|emb|CAN70848.1| hypothetical protein VITISV_038929 [Vitis vinifera]

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/75 (69%), Positives = 59/75 (78%), Gaps = 4/75 (5%)

Query: 39  PLCCPARRRFSSSATRIIPRASSATAVEDG----SNGDTDTIPTPKVIIDLDSDPDATIV 94
           P C P + R SSS + I PRASSATA++DG    +  DTD IPTPKVIID DSDP+ATIV
Sbjct: 41  PPCVPLKGRLSSSVSTITPRASSATALKDGKPDGNYDDTDAIPTPKVIIDQDSDPNATIV 100

Query: 95  EITFGDRLGALLDTV 109
           EITFGDRLGALLDT+
Sbjct: 101 EITFGDRLGALLDTM 115

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	109
TAIR|locus:2015616	290	ACR11 "ACT domain repeats 11"	0.963	0.362	0.466	4.7e-16
TAIR|locus:2175458	301	ACR12 "ACT domain repeats 12"	0.458	0.166	0.54	2.1e-09

TAIR|locus:2015616 ACR11 "ACT domain repeats 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 55/118 (46%), Positives = 71/118 (60%)

Query:     1 MAVAMGSASVHLAVQICCNNEFKANAAFVTGSPR---FG--NKPLCCPARRRFSSSATRI 55
             MA+A  S S         +   + +   +   PR   FG  +KPL    R R S+   +I
Sbjct:     1 MAMASASGSALCFTDASSSLALRRDCGALCLPPRTVTFGFVDKPLVNLERLRLST--LKI 58

Query:    56 IPRASSATAVE----DGSNGDTDTIPTPKVIIDLDSDPDATIVEITFGDRLGALLDTV 109
               RAS+ATAVE    +GS  D+D +PTP VIID DSDPDAT++E+TFGDRLGALLDT+
Sbjct:    59 --RASNATAVENGKQEGSAADSDKVPTPVVIIDQDSDPDATVLEVTFGDRLGALLDTM 114

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0010319 "stromule" evidence=IDA

GO:0009416 "response to light stimulus" evidence=IEP

GO:0009744 "response to sucrose stimulus" evidence=IEP

GO:0006833 "water transport" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

TAIR|locus:2175458 ACR12 "ACT domain repeats 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 2.1e-09, P = 2.1e-09
 Identities = 27/50 (54%), Positives = 38/50 (76%)

Query:    60 SSATAVEDGSNGDTDTIPTPKVIIDLDSDPDATIVEITFGDRLGALLDTV 109
             S+AT     S  D D +P P V+ID D+DP+ATIV+++FG+RLGAL+DT+
Sbjct:    76 SAATPSYPKSEDDDDVVPMPMVMIDQDADPEATIVQLSFGNRLGALIDTM 125


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.132   0.390    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      109       109   0.00091  102 3  11 22  0.43    30
                                                     29  0.41    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  488 (52 KB)
  Total size of DFA:  97 KB (2070 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.10u 0.06s 12.16t   Elapsed:  00:00:02
  Total cpu time:  12.10u 0.06s 12.16t   Elapsed:  00:00:02
  Start:  Fri May 10 07:12:34 2013   End:  Fri May 10 07:12:36 2013

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016597 "amino acid binding" evidence=IEA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0019408 "dolichol biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q0J709	UP12_ORYSJ	No assigned EC number	0.7460	0.5688	0.2190	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00