Citrus Sinensis ID: 033922

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------11
Protein Sequence
MGASMGMGFMAVFAVSGSVVLVASQVHKRLLSDFMKKIESEICGPEKYHEKKRVRFADDVVEPSGNNKEYRKRNSMSKADEFVRMPLNRQILYKGMIQNRTLQSQNCM
Secondary Structure (PSIPRED)
cccccHHHHHHHHHccccEEEEEEcccccccccHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHccccccccccccHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHEEEHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHccHHHHHHccEEEEHHHccccccccHHHHHcccccccccEccccHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
MGASMGMGFMAVFAVSGSVVLVASQVHKRLLSDFMKKIEseicgpekyhekkrvrfaddvvepsgnnkeyrkrnsmskadefvrmplnRQILYKGMiqnrtlqsqncm
Flexible Loop (DISEMBL)
MGASMGMGFMAVFAVSGSVVLVASQVHKRLLSDFMKKIEseicgpekyhekkrvrfaddvvepsgnnkeyrkrnsmskadefvrmPLNRQILYkgmiqnrtlqsqncm
Low Complexity Region (SEG)
MGASMGMGFMAVFAVSGSVVLVASQVHKRLLSDFMKKIESEICGPEKYHEKKRVRFADDVVEPSGNNKEYRKRNSMSKADEFVRMPLNRQILYKGMIQNRTLQSQNCM
Disordered region (IsUnstruct)
******MGFMAVFAVSGSVVLVASQVHKRLLSDFMKKIESEICGPEKY************************************MPLNRQILYKGMI***********
Disordered Region (DISOPRED)
*****GM*FMAVFAVSGSVVLVASQVHKRL**********************************************************RQILYKGMIQNRTLQS*NC*
Disordered Region (DISEMBL)
MGASMGMGFMAVFAVSGSVVLVASQVHKRLLSDFMKKIESEICGPEKYHEKKRVRFADDVVEPSGNNKEYRKRNSMSKADEFVRMPLNRQILYKGMIQNRTLQSQNCM
Disordered Region (DISPRO)
****MGMGFMAVFAVSGSVVLVASQVHKRLLSDFMKKIESEICGPEKYHEKKRVRFADDVVEPSGNN*EYR*****SKADEFVRMPLNRQILYKGMIQNRTLQ*****
Transmembrane Helix (TMHMM)
ooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGASMGMGFMAVFAVSGSVVLVASQVHKRLLSDFMKKIESEICGPEKYHEKKRVRFADDVVEPSGNNKEYRKRNSMSKADEFVRMPLNRQILYKGMIQNRTLQSQNCM
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	108
359481054	120	PREDICTED: uncharacterized protein LOC10	0.935	0.841	0.587	6e-28
255566219	145	conserved hypothetical protein [Ricinus	0.962	0.717	0.511	3e-27
224138246	99	predicted protein [Populus trichocarpa]	0.907	0.989	0.564	3e-24
224091473	89	predicted protein [Populus trichocarpa]	0.675	0.820	0.662	2e-20
297816510	86	hypothetical protein ARALYDRAFT_906603 [	0.675	0.848	0.702	6e-20
18409565	86	uncharacterized protein [Arabidopsis tha	0.675	0.848	0.716	9e-18
297823395	82	hypothetical protein ARALYDRAFT_482556 [	0.703	0.926	0.571	1e-13
15227518	80	uncharacterized protein [Arabidopsis tha	0.675	0.912	0.584	2e-13
388498798	140	unknown [Lotus japonicus]	0.935	0.721	0.397	4e-12
356503870	122	PREDICTED: uncharacterized protein LOC10	0.925	0.819	0.398	4e-11

>gi|359481054|ref|XP_003632560.1| PREDICTED: uncharacterized protein LOC100854533 [Vitis vinifera] gi|296089347|emb|CBI39119.3| unnamed protein product [Vitis vinifera]

 Score =  128 bits (321), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 67/114 (58%), Positives = 82/114 (71%), Gaps = 13/114 (11%)

Query: 3   ASMGMGFMAVFAVSGSVVLVASQVHKRLLSDFMKKIESEICGPEKYHEKKRVRFADDVVE 62
           A +G+GFMAVFAVSGS VL+A Q+HKRLLSDFMKKIESEI G   Y  KK+VRFA+ VVE
Sbjct: 5   AGIGVGFMAVFAVSGSAVLIALQLHKRLLSDFMKKIESEIGGSGNYQAKKKVRFAETVVE 64

Query: 63  PSGNNKEYRKRN-----------SMSKADEFVRMPLNRQILYKGMIQNRTLQSQ 105
           PS NNKEYR ++           SM K ++   MPLNR+ILYKG+I+ + L+  
Sbjct: 65  PSSNNKEYRLKHTAKAARAGGVASMKKMED--AMPLNRRILYKGIIEYKALRGH 116

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255566219|ref|XP_002524097.1| conserved hypothetical protein [Ricinus communis] gi|223536665|gb|EEF38307.1| conserved hypothetical protein [Ricinus communis]

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 68/133 (51%), Positives = 87/133 (65%), Gaps = 29/133 (21%)

Query: 3   ASMGMGFMAVFAVSGSVVLVASQVHKRLLSDFMKKIESEICGPEKY------HEKKRVRF 56
           ++MG+GFMA FAVSGSVVL+A QVHKRL+SDFMKKIE E+ G           EKKRVRF
Sbjct: 8   STMGLGFMAAFAVSGSVVLIARQVHKRLVSDFMKKIECELMGRRLSLSSSSCQEKKRVRF 67

Query: 57  ADDVVEPSGNNKEYRKRN--SMSKADEFVR---------------------MPLNRQILY 93
           A++V+EPSGNNKEYR +N   +S+ D  ++                     MPLNRQ+LY
Sbjct: 68  AENVIEPSGNNKEYRNKNLVRISEGDNVLKIMEDVKINQRNYGHGAKLMEAMPLNRQVLY 127

Query: 94  KGMIQNRTLQSQN 106
           KG+++ RTL+  N
Sbjct: 128 KGILEYRTLKGCN 140

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224138246|ref|XP_002322766.1| predicted protein [Populus trichocarpa] gi|222867396|gb|EEF04527.1| predicted protein [Populus trichocarpa]

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 61/108 (56%), Positives = 78/108 (72%), Gaps = 10/108 (9%)

Query: 1   MGASMGMGFMAVFAVSGSVVLVASQVHKRLLSDFMKKIESEICGPEKY-HEKKRVRFADD 59
           M  SMG+GFMA FAVSGSVVL+A QVHKRLLSDFMKK+E E+ G  +   ++KRVRFADD
Sbjct: 1   MQGSMGLGFMAAFAVSGSVVLIARQVHKRLLSDFMKKMEFELAGSRRSCQDRKRVRFADD 60

Query: 60  VVEPSGNNKEYRKRNSMSKADEFVRMPLNRQILYKGMIQNRTLQSQNC 107
           V+EPS NNKEYRKR+  +K D       N  +  +  + +++L +QNC
Sbjct: 61  VLEPSSNNKEYRKRH--TKGD-------NEVLKMEDFVLDQSLMAQNC 99

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224091473|ref|XP_002309265.1| predicted protein [Populus trichocarpa] gi|222855241|gb|EEE92788.1| predicted protein [Populus trichocarpa]

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 49/74 (66%), Positives = 61/74 (82%), Gaps = 1/74 (1%)

Query: 1  MGASMGMGFMAVFAVSGSVVLVASQVHKRLLSDFMKKIESEICGPEKY-HEKKRVRFADD 59
          M   +G+GFMA FAVSGS+VL+A Q+HKRLLSDFMK++E E+ G  +   +KKRVRFADD
Sbjct: 1  MAGYLGIGFMAAFAVSGSLVLIARQLHKRLLSDFMKQMEFELRGSRRSCQDKKRVRFADD 60

Query: 60 VVEPSGNNKEYRKR 73
          V+EPS NNKEYR+R
Sbjct: 61 VMEPSSNNKEYRRR 74

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297816510|ref|XP_002876138.1| hypothetical protein ARALYDRAFT_906603 [Arabidopsis lyrata subsp. lyrata] gi|297321976|gb|EFH52397.1| hypothetical protein ARALYDRAFT_906603 [Arabidopsis lyrata subsp. lyrata]

 Score =  101 bits (251), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 52/74 (70%), Positives = 60/74 (81%), Gaps = 1/74 (1%)

Query: 6  GMGFMAVFAVSGSVVLVASQVHKRLLSDFMKKIESEICGPEKYHEKKRVRFADDVVEPSG 65
           +GFMAVFAVSGSVV +ASQ HKRLLSD+M K + EI   +K   KK+VRFA DVVEPSG
Sbjct: 4  SLGFMAVFAVSGSVVFLASQFHKRLLSDYMDKFDFEIRAQQKMVMKKKVRFAADVVEPSG 63

Query: 66 NNKEYRKRNSMSKA 79
          NNKEYR+R+S SKA
Sbjct: 64 NNKEYRRRHS-SKA 76

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18409565|ref|NP_566965.1| uncharacterized protein [Arabidopsis thaliana] gi|10045569|emb|CAC07927.1| putative protein [Arabidopsis thaliana] gi|17380698|gb|AAL36179.1| unknown protein [Arabidopsis thaliana] gi|20259005|gb|AAM14218.1| unknown protein [Arabidopsis thaliana] gi|21592686|gb|AAM64635.1| unknown [Arabidopsis thaliana] gi|332645417|gb|AEE78938.1| uncharacterized protein [Arabidopsis thaliana]

 Score = 94.4 bits (233), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 53/74 (71%), Positives = 60/74 (81%), Gaps = 1/74 (1%)

Query: 6  GMGFMAVFAVSGSVVLVASQVHKRLLSDFMKKIESEICGPEKYHEKKRVRFADDVVEPSG 65
           +GFMAVFAVSGSVV +ASQ HKRLLSD+M K E EI   +K   KK+VRFA DVVEPSG
Sbjct: 4  SLGFMAVFAVSGSVVFLASQFHKRLLSDYMDKFEFEIRAQKKMVMKKKVRFAADVVEPSG 63

Query: 66 NNKEYRKRNSMSKA 79
          NNKEYR+R+S SKA
Sbjct: 64 NNKEYRRRHS-SKA 76

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297823395|ref|XP_002879580.1| hypothetical protein ARALYDRAFT_482556 [Arabidopsis lyrata subsp. lyrata] gi|297325419|gb|EFH55839.1| hypothetical protein ARALYDRAFT_482556 [Arabidopsis lyrata subsp. lyrata]

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/77 (57%), Positives = 59/77 (76%), Gaps = 1/77 (1%)

Query: 6  GMGFMAVFAVSGSVVLVASQVHKRLLSDFMKKIESEICG-PEKYHEKKRVRFADDVVEPS 64
           +GFM VFAVSGSVVL+A+Q+HKRLLSD+M K+E +      K  +KK+V FA+D+VEPS
Sbjct: 4  SIGFMTVFAVSGSVVLLAAQLHKRLLSDYMDKLEPQHSNKERKKTKKKKVSFAEDMVEPS 63

Query: 65 GNNKEYRKRNSMSKADE 81
          GNN+EYR+    SK ++
Sbjct: 64 GNNEEYRRSFRKSKLED 80

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15227518|ref|NP_181129.1| uncharacterized protein [Arabidopsis thaliana] gi|4510384|gb|AAD21472.1| unknown protein [Arabidopsis thaliana] gi|330254077|gb|AEC09171.1| uncharacterized protein [Arabidopsis thaliana]

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/77 (58%), Positives = 58/77 (75%), Gaps = 4/77 (5%)

Query: 7  MGFMAVFAVSGSVVLVASQVHKRLLSDFMKKIESEICGPEKYHEKKRVRFADDVVEPSGN 66
          +GFM VFAVSGSVVL+A+Q+HKRLLS +M K+E      E+  +KK+V FA+D+VEPSGN
Sbjct: 5  IGFMTVFAVSGSVVLLAAQLHKRLLSGYMDKLEPPT--KERKKKKKKVSFAEDMVEPSGN 62

Query: 67 NKEYRK--RNSMSKADE 81
          N+EYR+  R S    DE
Sbjct: 63 NEEYRRSFRKSSKLEDE 79

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388498798|gb|AFK37465.1| unknown [Lotus japonicus]

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/136 (39%), Positives = 71/136 (52%), Gaps = 35/136 (25%)

Query: 1   MGASMGMGFMAVFAVSGSVVLVASQVHKRLLSDFMKKIESE------------ICGPEKY 48
           M  SM  G MAVFAVSGS+V +  QVHKR+LS+FMKK E E            + G EK+
Sbjct: 1   MENSMRFGLMAVFAVSGSMVFLVHQVHKRILSNFMKKFEFEMGGMLYPNGHKNLSGSEKH 60

Query: 49  HEKKRVRFADDVVEPSGNNKEYRKRNSMS-----KADEFVR-----------------MP 86
             KK+VRFA   ++    NK  R   +++     KADE VR                 MP
Sbjct: 61  QAKKKVRFAKQGLKLQLENKGNRNSRNVTRAQRVKADE-VRVMENIQKRRQGPKLEDTMP 119

Query: 87  LNRQILYKGMIQNRTL 102
            NR +LY+ +++ RTL
Sbjct: 120 PNRAVLYRDILKYRTL 135

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356503870|ref|XP_003520724.1| PREDICTED: uncharacterized protein LOC100815542 [Glycine max]

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/118 (39%), Positives = 63/118 (53%), Gaps = 18/118 (15%)

Query: 1   MGASMGMGFMAVFAVSGSVVLVASQVHKRLLSDFMKKIESEICGPEKYHEKKRVRFADDV 60
           M  SM +GFMAV AVSGS+     QVHKR+LS FM   E E+ G EK+  KK+VRFA + 
Sbjct: 1   MEDSMRLGFMAVVAVSGSMAFSVHQVHKRILSKFMDIFECEMGGSEKHQAKKKVRFAKEA 60

Query: 61  VEPSG---NNKEYRKRNSMSKADEFV---------------RMPLNRQILYKGMIQNR 100
           +  +     +K  + R    KA+E                  MP NR +LYKG+++ R
Sbjct: 61  LRNNSCRKGDKMIKIRLQRIKAEEIWVMKNVQKWRHGPKEDMMPPNRAVLYKGIMKYR 118

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	108
TAIR|locus:2100559	86	AT3G52360 "AT3G52360" [Arabido	0.722	0.906	0.683	3.9e-21
TAIR|locus:2039285	80	AT2G35850 "AT2G35850" [Arabido	0.675	0.912	0.584	5.3e-17
TAIR|locus:504956218	129	AT1G52565 "AT1G52565" [Arabido	0.824	0.689	0.298	5e-05
TAIR|locus:2093277	135	AT3G15760 "AT3G15760" [Arabido	0.453	0.362	0.396	0.00035

TAIR|locus:2100559 AT3G52360 "AT3G52360" [Arabidopsis thaliana (taxid:3702)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 54/79 (68%), Positives = 62/79 (78%)

Query:     7 MGFMAVFAVSGSVVLVASQVHKRLLSDFMKKIESEICGPEKYHEKKRVRFADDVVEPSGN 66
             +GFMAVFAVSGSVV +ASQ HKRLLSD+M K E EI   +K   KK+VRFA DVVEPSGN
Sbjct:     5 LGFMAVFAVSGSVVFLASQFHKRLLSDYMDKFEFEIRAQKKMVMKKKVRFAADVVEPSGN 64

Query:    67 NKEYRKRNSMSKADEFVRM 85
             NKEYR+R+S SKA    +M
Sbjct:    65 NKEYRRRHS-SKAKSNSKM 82

GO:0003674 "molecular_function" evidence=ND

GO:0080167 "response to karrikin" evidence=IEP

TAIR|locus:2039285 AT2G35850 "AT2G35850" [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 45/77 (58%), Positives = 58/77 (75%)

Query:     7 MGFMAVFAVSGSVVLVASQVHKRLLSDFMKKIESEICGPEKYHEKKRVRFADDVVEPSGN 66
             +GFM VFAVSGSVVL+A+Q+HKRLLS +M K+E      E+  +KK+V FA+D+VEPSGN
Sbjct:     5 IGFMTVFAVSGSVVLLAAQLHKRLLSGYMDKLEPPT--KERKKKKKKVSFAEDMVEPSGN 62

Query:    67 NKEYRK--RNSMSKADE 81
             N+EYR+  R S    DE
Sbjct:    63 NEEYRRSFRKSSKLEDE 79

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:504956218 AT1G52565 "AT1G52565" [Arabidopsis thaliana (taxid:3702)]

 Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 31/104 (29%), Positives = 56/104 (53%)

Query:    12 VFAVSGSVVLVASQVHKRLLSD--FMKK-IESEICGPEKYHEKKRVRFADDVVEPSGNNK 68
             VF+ +   + ++ Q      SD   ++  + SE    ++ ++KK+V+FA++V E  GN +
Sbjct:    18 VFSSTALFLAISRQFSGNQTSDQQILRSCLSSEEKKKQRKNKKKKVKFAENVKETKGNGE 77

Query:    69 EYRKRN-------SMSKADE---FVR--MPLNRQILYKGMIQNR 100
             EYRK++        M K ++     R  MP NR  LY G++++R
Sbjct:    78 EYRKKSLRRIVPEQMIKPEKTGSVCRNDMPANRIALYNGILRDR 121

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2093277 AT3G15760 "AT3G15760" [Arabidopsis thaliana (taxid:3702)]

 Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
 Identities = 25/63 (39%), Positives = 34/63 (53%)

Query:    52 KRVRFADDVVEPSGNNKEYRKR--NSMS---------KADEFVR---MPLNRQILYKGMI 97
             K+VRFAD+V +  GN +EYR+R  N  S         K     R   MP NR  LY G++
Sbjct:    65 KKVRFADNVKDTKGNGEEYRRRELNRKSVPKPVTKPGKTGSMCRISTMPANRMALYNGIL 124

Query:    98 QNR 100
             ++R
Sbjct:   125 RDR 127


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.132   0.371    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      108       108   0.00091  102 3  11 22  0.40    30
                                                     29  0.40    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  527 (56 KB)
  Total size of DFA:  105 KB (2073 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.80u 0.16s 12.96t   Elapsed:  00:00:01
  Total cpu time:  12.80u 0.16s 12.96t   Elapsed:  00:00:01
  Start:  Fri May 10 08:31:33 2013   End:  Fri May 10 08:31:34 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009646 "response to absence of light" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00027165001 SubName- Full=Chromosome chr8 scaffold_41, whole genome shotgun sequence; (120 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	108
PF07491	60	PPI_Ypi1: Protein phosphatase inhibitor ; InterPro	94.22

>PF07491 PPI_Ypi1: Protein phosphatase inhibitor ; InterPro: IPR011107 These proteins include Ypi1, a novel Saccharomyces cerevisiae type 1 protein phosphatase inhibitor [] and ppp1r11/hcgv (O60927 from SWISSPROT), annotated as having protein phosphatase inhibitor activity []

Probab=94.22  E-value=0.021  Score=37.34  Aligned_cols=20  Identities=25%  Similarity=0.508  Sum_probs=17.4

Q ss_pred             cccccceeecccccCCCCCc
Q 033922           48 YHEKKRVRFADDVVEPSGNN   67 (108)
Q Consensus        48 ~~~KKRVRFAeDVve~~~~~   67 (108)
                      .+.+++|+|++|||||++-|
T Consensus        13 ~~~~~~V~W~edvVDNE~mg   32 (60)
T PF07491_consen   13 PKSRRRVQWSEDVVDNEHMG   32 (60)
T ss_pred             cCCCCceeecCCceeccccc
Confidence            46799999999999998754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00