Citrus Sinensis ID: 033941

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------11
Protein Sequence
MAYVERGVVKSKRSIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKWDGGPGGPGSGPYGGGGPRGPSRGLDNVRGLNDVRGNDHSSLPACGSCCGG
Secondary Structure (PSIPRED)
ccEEEccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mayvergvvkskrSIWRISTITDFFWSIINFIGVFFATMFsmeksdnyrkgsrsskkwdggpggpgsgpyggggprgpsrgldnvrglndvrgndhsslpacgsccgg
Flexible Loop (DISEMBL)
mayvergvvkskrsiwriSTITDFFWSIINFIGVFFATMFSMEKSDNYRKGsrsskkwdggpggPGSGPYGGGGPRGPSRGLDNVRGLNdvrgndhsslpacgsccgg
Low Complexity Region (SEG)
MAYVERGVVKSKRSIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKWDggpggpgsgpyggggprgpsrgLDNVRGLNDVRGNDHSSLPACGSCCGG
Disordered region (IsUnstruct)
******GVVKSKRSIWRISTITDFFWSIINFIGVFFATMFS*******************************************************************
Disordered Region (DISOPRED)
*AYVERGVVKSKRSIWRISTITDFFWSIINFIGVFFATMF*********************************************************SLPACGSCC**
Disordered Region (DISEMBL)
**********SKRSIWRISTITDFFWSIINFIGVFFATMFSMEK*******************GPGSGPYGGGGPRGPSRGLDNVRGLNDVRGNDHSSLPACGSCCGG
Disordered Region (DISPRO)
*AYVERGVVKSKRSIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKG***SKKWD**P*GPGS*********GPSRGLDNVRGLNDVRGNDHSSLPACGSCCGG
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAYVERGVVKSKRSIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKWDGGPGGPGSGPYGGGGPRGPSRGLDNVRGLNDVRGNDHSSLPACGSCCGG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	108	2.2.26 [Sep-21-2011]
Q4R8M1	94	Selenoprotein K OS=Macaca	N/A	no	0.638	0.734	0.394	5e-08
Q9Y6D0	94	Selenoprotein K OS=Homo s	yes	no	0.638	0.734	0.394	5e-08
Q32PE3	95	Selenoprotein K OS=Bos ta	yes	no	0.638	0.726	0.408	9e-08
Q9JLJ1	94	Selenoprotein K OS=Mus mu	yes	no	0.638	0.734	0.394	3e-07
Q6S9C4	94	Selenoprotein K OS=Chinch	N/A	no	0.620	0.712	0.424	5e-07
P59798	94	Selenoprotein K OS=Rattus	yes	no	0.638	0.734	0.394	7e-07
Q2EN82	94	Selenoprotein K OS=Sus sc	yes	no	0.638	0.734	0.380	1e-06
Q641S4	95	Selenoprotein K OS=Xenopu	N/A	no	0.611	0.694	0.367	2e-05
Q01H83	95	Selenoprotein K OS=Xenopu	yes	no	0.620	0.705	0.362	5e-05
Q66I79	94	Selenoprotein K OS=Danio	yes	no	0.601	0.691	0.428	8e-05

>sp|Q4R8M1|SELK_MACFA Selenoprotein K OS=Macaca fascicularis GN=SELK PE=3 SV=3

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 1  MAYVERGVVKSKRSI--WRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKW 58
          M Y+  G V   RS   WR+S ITDFFW I  F+ +FF T+   +       G+ S  ++
Sbjct: 1  MVYISNGQVLDSRSQSPWRLSLITDFFWGIAEFVVLFFKTLLQQDVKKRRSYGNSSDSRY 60

Query: 59 DGGPGGPGSGP 69
          D G G PG+ P
Sbjct: 61 DDGRGPPGNPP 71

Macaca fascicularis (taxid: 9541)

>sp|Q9Y6D0|SELK_HUMAN Selenoprotein K OS=Homo sapiens GN=SELK PE=1 SV=3

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 1  MAYVERGVVKSKRSI--WRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKW 58
          M Y+  G V   RS   WR+S ITDFFW I  F+ +FF T+   +       G+ S  ++
Sbjct: 1  MVYISNGQVLDSRSQSPWRLSLITDFFWGIAEFVVLFFKTLLQQDVKKRRSYGNSSDSRY 60

Query: 59 DGGPGGPGSGP 69
          D G G PG+ P
Sbjct: 61 DDGRGPPGNPP 71

Homo sapiens (taxid: 9606)

>sp|Q32PE3|SELK_BOVIN Selenoprotein K OS=Bos taurus GN=SELK PE=3 SV=3

 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 1  MAYVERGVVKSKRSI--WRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKW 58
          M Y+  G V   RS   WR+S ITDFFW I  F+ +FF T+   +       GS S  ++
Sbjct: 1  MVYISNGQVLDSRSQSPWRLSFITDFFWGIAEFVVLFFRTLLQQDVKKRRGYGSSSDSRY 60

Query: 59 DGGPGGPGSGP 69
          D G G PG+ P
Sbjct: 61 DDGRGPPGNPP 71

Bos taurus (taxid: 9913)

>sp|Q9JLJ1|SELK_MOUSE Selenoprotein K OS=Mus musculus GN=Selk PE=2 SV=3

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 2/71 (2%)

Query: 1  MAYVERGVVKSKR--SIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKW 58
          M Y+  G V   R  S WR+S +TDFFW I  F+  FF T+   +       GS S  ++
Sbjct: 1  MVYISNGQVLDSRNQSPWRVSFLTDFFWGIAEFVVFFFKTLLQQDVKKRRGYGSSSDSRY 60

Query: 59 DGGPGGPGSGP 69
          D G G PG+ P
Sbjct: 61 DDGRGPPGNPP 71

Mus musculus (taxid: 10090)

>sp|Q6S9C4|SELK_CHILA Selenoprotein K OS=Chinchilla lanigera GN=SELK PE=3 SV=3

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 6/73 (8%)

Query: 1  MAYVERGVVKSKRSI--WRISTITDFFWSIINFIGVFFATMFS--MEKSDNYRKGSRSSK 56
          M Y+  G V   RS   WR+S ITDFFW I  F+ +FF T+    ++K   YR  S S  
Sbjct: 1  MVYISNGQVLDSRSQSPWRLSLITDFFWGIAEFVVLFFKTLLQQDVKKGRGYRNSSDS-- 58

Query: 57 KWDGGPGGPGSGP 69
          ++D G G PG+ P
Sbjct: 59 RYDDGRGPPGNPP 71

Chinchilla lanigera (taxid: 34839)

>sp|P59798|SELK_RAT Selenoprotein K OS=Rattus norvegicus GN=Selk PE=3 SV=2

 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 2/71 (2%)

Query: 1  MAYVERGVVKSKR--SIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKW 58
          M Y+  G V   R  S WR+S ITDFFW I  F+  FF T+   +       G  S  ++
Sbjct: 1  MVYISNGQVLDSRNQSPWRLSFITDFFWGIAEFVVFFFKTLLQQDVKKRRGYGGSSDSRY 60

Query: 59 DGGPGGPGSGP 69
          D G G PG+ P
Sbjct: 61 DDGRGPPGNPP 71

Rattus norvegicus (taxid: 10116)

>sp|Q2EN82|SELK_PIG Selenoprotein K OS=Sus scrofa GN=SELK PE=3 SV=3

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 2/71 (2%)

Query: 1  MAYVERGVVKSKRSI--WRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKW 58
          M Y+  G     RS   WR+S ITDFFW I  F+ +FF T+   +       G  S  ++
Sbjct: 1  MVYISNGQALDSRSQSPWRLSFITDFFWGIAEFVVLFFRTLLQQDVKKRRGYGGSSDSRY 60

Query: 59 DGGPGGPGSGP 69
          D G G PG+ P
Sbjct: 61 DDGRGPPGNPP 71

Sus scrofa (taxid: 9823)

>sp|Q641S4|SELK_XENLA Selenoprotein K OS=Xenopus laevis GN=selk PE=3 SV=3

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 2/68 (2%)

Query: 1  MAYVERGVVK--SKRSIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKW 58
          M Y+  G V     RS WR+S +TD FW I +F+ +FF ++     +    + S SS ++
Sbjct: 1  MVYISNGQVLDGQSRSPWRLSFLTDMFWGITDFVVMFFQSIIHPNVTRRGCQNSSSSTRY 60

Query: 59 DGGPGGPG 66
          D G G PG
Sbjct: 61 DDGRGPPG 68

Xenopus laevis (taxid: 8355)

>sp|Q01H83|SELK_XENTR Selenoprotein K OS=Xenopus tropicalis GN=selk PE=3 SV=2

 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 2/69 (2%)

Query: 1  MAYVERGVVK--SKRSIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKW 58
          M Y+  G V     RS WR+S +TD FW I +FI +FF ++     +    + S S  ++
Sbjct: 1  MVYIANGQVLDGQSRSPWRLSFLTDMFWGITDFIVMFFQSIIHPNVTRRGCQNSSSRTRF 60

Query: 59 DGGPGGPGS 67
          D G G PG+
Sbjct: 61 DDGRGPPGN 69

Xenopus tropicalis (taxid: 8364)

>sp|Q66I79|SELK_DANRE Selenoprotein K OS=Danio rerio GN=selk PE=3 SV=3

 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 36/70 (51%), Gaps = 5/70 (7%)

Query: 1  MAYVERGVV--KSKRSIWRISTITDFFWSIINFIGVFFATMFS--MEKSDNYRKGSRSSK 56
          M YV  G V     RS W +S +TDFFW  + FIG+FF T+    + K  N    SR S 
Sbjct: 1  MVYVSNGQVLDSRSRSPWSLSFLTDFFWGAVEFIGLFFQTLVQPDLSKDGNNSASSRFSD 60

Query: 57 KWDGGPGGPG 66
             G PG PG
Sbjct: 61 G-RGPPGFPG 69

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	108
351726228	109	uncharacterized protein LOC100500441 [Gl	0.981	0.972	0.727	5e-31
351722987	109	uncharacterized protein LOC100526958 [Gl	0.981	0.972	0.727	5e-31
255545432	100	conserved hypothetical protein [Ricinus	0.925	1.0	0.841	1e-29
225459495	102	PREDICTED: selenoprotein K [Vitis vinife	0.944	1.0	0.740	2e-29
224084858	100	predicted protein [Populus trichocarpa]	0.925	1.0	0.822	3e-29
224063124	100	predicted protein [Populus trichocarpa]	0.925	1.0	0.813	1e-28
357488979	110	hypothetical protein MTR_5g059100 [Medic	0.990	0.972	0.727	1e-28
449446207	101	PREDICTED: selenoprotein K-like [Cucumis	0.935	1.0	0.710	5e-28
22328481	113	glycine-rich protein [Arabidopsis thalia	0.990	0.946	0.681	6e-28
302141852	111	unnamed protein product [Vitis vinifera]	0.944	0.918	0.675	1e-26

>gi|351726228|ref|NP_001238143.1| uncharacterized protein LOC100500441 [Glycine max] gi|255630343|gb|ACU15528.1| unknown [Glycine max]

 Score =  138 bits (347), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/110 (72%), Positives = 85/110 (77%), Gaps = 4/110 (3%)

Query: 1   MAYVERGVVKSKRSIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKWD- 59
           MAYVERGVVKSKRSIWR+ TITDFFW+I+NFIGVFFATMFSMEKSD YRK S   KKWD 
Sbjct: 1   MAYVERGVVKSKRSIWRLKTITDFFWAIVNFIGVFFATMFSMEKSDAYRKRS-VGKKWDG 59

Query: 60  --GGPGGPGSGPYGGGGPRGPSRGLDNVRGLNDVRGNDHSSLPACGSCCG 107
              G G  G G  G G    P  GLDNVRGL+ +RG DHSSLPACGSCCG
Sbjct: 60  GAPGGGPGGGGGGGSGPRGPPRGGLDNVRGLDSIRGRDHSSLPACGSCCG 109

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351722987|ref|NP_001236495.1| uncharacterized protein LOC100526958 [Glycine max] gi|255631250|gb|ACU15992.1| unknown [Glycine max]

 Score =  138 bits (347), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/110 (72%), Positives = 87/110 (79%), Gaps = 4/110 (3%)

Query: 1   MAYVERGVVKSKRSIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKWD- 59
           MAYVERGVVKSKRSIWR+ TITDFFW+I+N+IG+FFATMFSMEKSD YRKGS   KKWD 
Sbjct: 1   MAYVERGVVKSKRSIWRLKTITDFFWAIVNYIGLFFATMFSMEKSDAYRKGS-VGKKWDG 59

Query: 60  --GGPGGPGSGPYGGGGPRGPSRGLDNVRGLNDVRGNDHSSLPACGSCCG 107
              G G  G G  GGG    P  GLDNVRGL+ +RG DHSSLPACGSCCG
Sbjct: 60  GAPGGGPGGGGGGGGGPRGPPRGGLDNVRGLDSIRGRDHSSLPACGSCCG 109

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545432|ref|XP_002513776.1| conserved hypothetical protein [Ricinus communis] gi|223546862|gb|EEF48359.1| conserved hypothetical protein [Ricinus communis]

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/107 (84%), Positives = 95/107 (88%), Gaps = 7/107 (6%)

Query: 1   MAYVERGVVKSKRSIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKWDG 60
           MAYVERGVVKSK+SIWR+ TITDFFW+IINFIGVFF+TMFSMEKSD YRKGS SSKKWDG
Sbjct: 1   MAYVERGVVKSKKSIWRLRTITDFFWAIINFIGVFFSTMFSMEKSDAYRKGSGSSKKWDG 60

Query: 61  GPGGPGSGPYGGGGPRGPSRGLDNVRGLNDVRGNDHSSLPACGSCCG 107
           GPGGPGSGP  GGGPRGP RGLDNVRG+      DHSSLPACGSCCG
Sbjct: 61  GPGGPGSGP-YGGGPRGPPRGLDNVRGI------DHSSLPACGSCCG 100

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459495|ref|XP_002285840.1| PREDICTED: selenoprotein K [Vitis vinifera] gi|147801093|emb|CAN71044.1| hypothetical protein VITISV_015657 [Vitis vinifera]

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/108 (74%), Positives = 85/108 (78%), Gaps = 6/108 (5%)

Query: 1   MAYVERGVVKSKRSIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKWDG 60
           MAYVERGVVKS RSIWR+ TITDFFW+I+NFIGVFF TMFSMEKSD YRK S S KKWDG
Sbjct: 1   MAYVERGVVKSNRSIWRLRTITDFFWAIVNFIGVFFVTMFSMEKSDAYRKSSGSGKKWDG 60

Query: 61  GPGGPGSGPYGGGGPRGPSRGLDNVRGLNDVRGNDHSSLPACGSCCGG 108
           G  G       GGGPRGP RGLDNVRG+      DHS+LPACGSCCGG
Sbjct: 61  GGPGGPGRGPYGGGPRGPPRGLDNVRGI------DHSALPACGSCCGG 102

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224084858|ref|XP_002307425.1| predicted protein [Populus trichocarpa] gi|118485451|gb|ABK94582.1| unknown [Populus trichocarpa] gi|222856874|gb|EEE94421.1| predicted protein [Populus trichocarpa]

 Score =  132 bits (332), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/107 (82%), Positives = 95/107 (88%), Gaps = 7/107 (6%)

Query: 1   MAYVERGVVKSKRSIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKWDG 60
           MAYVERGVVKS+RSIWR+ TITDFFW+I+NFIGVFF+TMFSMEK+D YRKGS SSKKWDG
Sbjct: 1   MAYVERGVVKSQRSIWRLRTITDFFWAIVNFIGVFFSTMFSMEKTDAYRKGSGSSKKWDG 60

Query: 61  GPGGPGSGPYGGGGPRGPSRGLDNVRGLNDVRGNDHSSLPACGSCCG 107
           GPGGPGSGP  GGGPRGP RGLDNVRG+      DHSSLPACGSCCG
Sbjct: 61  GPGGPGSGP-YGGGPRGPPRGLDNVRGI------DHSSLPACGSCCG 100

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063124|ref|XP_002301002.1| predicted protein [Populus trichocarpa] gi|118481555|gb|ABK92720.1| unknown [Populus trichocarpa] gi|222842728|gb|EEE80275.1| predicted protein [Populus trichocarpa]

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/107 (81%), Positives = 94/107 (87%), Gaps = 7/107 (6%)

Query: 1   MAYVERGVVKSKRSIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKWDG 60
           MAYVERGV+KSKRSIWR+ TITDFFW+I+N IGVFF+TMFSMEK+D YRKGS SSKKWDG
Sbjct: 1   MAYVERGVLKSKRSIWRLRTITDFFWAIVNLIGVFFSTMFSMEKTDAYRKGSGSSKKWDG 60

Query: 61  GPGGPGSGPYGGGGPRGPSRGLDNVRGLNDVRGNDHSSLPACGSCCG 107
           GPGGPGSGP  GGGPRGP RGLDNVRG+      DHSSLPACGSCCG
Sbjct: 61  GPGGPGSGP-YGGGPRGPPRGLDNVRGI------DHSSLPACGSCCG 100

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357488979|ref|XP_003614777.1| hypothetical protein MTR_5g059100 [Medicago truncatula] gi|355516112|gb|AES97735.1| hypothetical protein MTR_5g059100 [Medicago truncatula]

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/110 (72%), Positives = 86/110 (78%), Gaps = 3/110 (2%)

Query: 1   MAYVERGVVKSKRSIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGS---RSSKK 57
           MAYVERG VKSKRSIWR+ TITDFFW+I+N IGVFFATMFSMEKSD YRKGS   +    
Sbjct: 1   MAYVERGTVKSKRSIWRLKTITDFFWAIVNIIGVFFATMFSMEKSDAYRKGSAGKKYGGG 60

Query: 58  WDGGPGGPGSGPYGGGGPRGPSRGLDNVRGLNDVRGNDHSSLPACGSCCG 107
             GG GG G GPYGGG    P  GLDNVRGL+ +RG DHSSLPACGSCCG
Sbjct: 61  GPGGGGGGGGGPYGGGPRGPPRGGLDNVRGLDSLRGRDHSSLPACGSCCG 110

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446207|ref|XP_004140863.1| PREDICTED: selenoprotein K-like [Cucumis sativus] gi|449522556|ref|XP_004168292.1| PREDICTED: selenoprotein K-like [Cucumis sativus]

 Score =  128 bits (321), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/107 (71%), Positives = 83/107 (77%), Gaps = 6/107 (5%)

Query: 1   MAYVERGVVKSKRSIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKWDG 60
           MAYVERGVVKS+RS WR+ TITDFFW+I+N IGVFF T+FSMEKS+ YRKGS S KKWDG
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60

Query: 61  GPGGPGSGPYGGGGPRGPSRGLDNVRGLNDVRGNDHSSLPACGSCCG 107
           G  G       GG PRGP RGLDNVRG+      DHSSLPACGSCCG
Sbjct: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGI------DHSSLPACGSCCG 101

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22328481|ref|NP_192563.2| glycine-rich protein [Arabidopsis thaliana] gi|18252943|gb|AAL62398.1| unknown protein [Arabidopsis thaliana] gi|23198028|gb|AAN15541.1| unknown protein [Arabidopsis thaliana] gi|332657210|gb|AEE82610.1| glycine-rich protein [Arabidopsis thaliana]

 Score =  127 bits (320), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 77/113 (68%), Positives = 83/113 (73%), Gaps = 6/113 (5%)

Query: 1   MAYVERGVVKSKRSIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKW-- 58
           MAYVE GVVK+KR IWR+ TI DFF SIIN I VFF TMFSMEKSD YRKGS+ +KKW  
Sbjct: 1   MAYVEGGVVKAKRPIWRLRTIKDFFLSIINLIQVFFVTMFSMEKSDAYRKGSKPNKKWGG 60

Query: 59  ----DGGPGGPGSGPYGGGGPRGPSRGLDNVRGLNDVRGNDHSSLPACGSCCG 107
                GG GG   G  GG G   P  GLDNVRGLND+RG DH+SLPACGSCCG
Sbjct: 61  GMGGGGGGGGGSGGGGGGRGGGPPRGGLDNVRGLNDIRGADHNSLPACGSCCG 113

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302141852|emb|CBI19055.3| unnamed protein product [Vitis vinifera]

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/117 (67%), Positives = 84/117 (71%), Gaps = 15/117 (12%)

Query: 1   MAYVER---------GVVKSKRSIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKG 51
           MAYVER          VVKS RSIWR+ TITDFFW+I+NFIGVFF TMFSMEKSD YRK 
Sbjct: 1   MAYVERVVAVRKQVCCVVKSNRSIWRLRTITDFFWAIVNFIGVFFVTMFSMEKSDAYRKS 60

Query: 52  SRSSKKWDGGPGGPGSGPYGGGGPRGPSRGLDNVRGLNDVRGNDHSSLPACGSCCGG 108
           S S KKWDGG  G       GGGPRGP RGLDNVRG+      DHS+LPACGSCCGG
Sbjct: 61  SGSGKKWDGGGPGGPGRGPYGGGPRGPPRGLDNVRGI------DHSALPACGSCCGG 111

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	108
TAIR|locus:2132472	113	AT4G08230 "AT4G08230" [Arabido	0.990	0.946	0.592	7.1e-29
UNIPROTKB|Q32PE3	95	SELK "Selenoprotein K" [Bos ta	0.546	0.621	0.393	2.3e-07
UNIPROTKB|A8K0M9	91	SELK "cDNA FLJ76513, highly si	0.546	0.648	0.377	2.9e-07
UNIPROTKB|Q9Y6D0	94	SELK "Selenoprotein K" [Homo s	0.546	0.627	0.377	2.9e-07
MGI|MGI:1931466	94	Selk "selenoprotein K" [Mus mu	0.546	0.627	0.377	4.8e-07
UNIPROTKB|F1SH79	91	SELK "Selenoprotein K" [Sus sc	0.546	0.648	0.377	6.1e-07
ZFIN|ZDB-GENE-040912-131	94	selk "selenoprotein K" [Danio	0.509	0.585	0.440	6.1e-07
RGD|1303129	94	Selk "selenoprotein K" [Rattus	0.546	0.627	0.377	1e-06
UNIPROTKB|E1C896	92	SELK "Uncharacterized protein"	0.481	0.565	0.421	7e-06
DICTYBASE|DDB_G0268720	115	selk "selenoprotein K" [Dictyo	0.916	0.860	0.309	8.1e-05

TAIR|locus:2132472 AT4G08230 "AT4G08230" [Arabidopsis thaliana (taxid:3702)]

 Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
 Identities = 67/113 (59%), Positives = 73/113 (64%)

Query:     1 MAYVERGVVKSKRSIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKWDX 60
             MAYVE GVVK+KR IWR+ TI DFF SIIN I VFF TMFSMEKSD YRKGS+ +KKW  
Sbjct:     1 MAYVEGGVVKAKRPIWRLRTIKDFFLSIINLIQVFFVTMFSMEKSDAYRKGSKPNKKWGG 60

Query:    61 XXXXXXXXXXXXXXXXXXXXX------LDNVRGLNDVRGNDHSSLPACGSCCG 107
                                        LDNVRGLND+RG DH+SLPACGSCCG
Sbjct:    61 GMGGGGGGGGGSGGGGGGRGGGPPRGGLDNVRGLNDIRGADHNSLPACGSCCG 113

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0006457 "protein folding" evidence=RCA

GO:0006984 "ER-nucleus signaling pathway" evidence=RCA

GO:0009408 "response to heat" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

UNIPROTKB|Q32PE3 SELK "Selenoprotein K" [Bos taurus (taxid:9913)]

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 24/61 (39%), Positives = 32/61 (52%)

Query:     1 MAYVERGVVKSKRSI--WRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKW 58
             M Y+  G V   RS   WR+S ITDFFW I  F+ +FF T+   +       GS S  ++
Sbjct:     1 MVYISNGQVLDSRSQSPWRLSFITDFFWGIAEFVVLFFRTLLQQDVKKRRGYGSSSDSRY 60

Query:    59 D 59
             D
Sbjct:    61 D 61

GO:2000406 "positive regulation of T cell migration" evidence=IEA

GO:0045728 "respiratory burst after phagocytosis" evidence=IEA

GO:0042102 "positive regulation of T cell proliferation" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

UNIPROTKB|A8K0M9 SELK "cDNA FLJ76513, highly similar to Homo sapiens HSPC030 mRNA" [Homo sapiens (taxid:9606)]

 Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 23/61 (37%), Positives = 32/61 (52%)

Query:     1 MAYVERGVVKSKRSI--WRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKW 58
             M Y+  G V   RS   WR+S ITDFFW I  F+ +FF T+   +       G+ S  ++
Sbjct:     1 MVYISNGQVLDSRSQSPWRLSLITDFFWGIAEFVVLFFKTLLQQDVKKRRSYGNSSDSRY 60

Query:    59 D 59
             D
Sbjct:    61 D 61

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0042102 "positive regulation of T cell proliferation" evidence=IEA

GO:0045728 "respiratory burst after phagocytosis" evidence=IEA

GO:2000406 "positive regulation of T cell migration" evidence=IEA

UNIPROTKB|Q9Y6D0 SELK "Selenoprotein K" [Homo sapiens (taxid:9606)]

 Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 23/61 (37%), Positives = 32/61 (52%)

Query:     1 MAYVERGVVKSKRSI--WRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKW 58
             M Y+  G V   RS   WR+S ITDFFW I  F+ +FF T+   +       G+ S  ++
Sbjct:     1 MVYISNGQVLDSRSQSPWRLSLITDFFWGIAEFVVLFFKTLLQQDVKKRRSYGNSSDSRY 60

Query:    59 D 59
             D
Sbjct:    61 D 61

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

MGI|MGI:1931466 Selk "selenoprotein K" [Mus musculus (taxid:10090)]

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 23/61 (37%), Positives = 31/61 (50%)

Query:     1 MAYVERGVVKSKR--SIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKW 58
             M Y+  G V   R  S WR+S +TDFFW I  F+  FF T+   +       GS S  ++
Sbjct:     1 MVYISNGQVLDSRNQSPWRVSFLTDFFWGIAEFVVFFFKTLLQQDVKKRRGYGSSSDSRY 60

Query:    59 D 59
             D
Sbjct:    61 D 61

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=ISO;IDA

GO:0006816 "calcium ion transport" evidence=IMP

GO:0006979 "response to oxidative stress" evidence=ISO

GO:0030335 "positive regulation of cell migration" evidence=IMP

GO:0042102 "positive regulation of T cell proliferation" evidence=IMP

GO:0045728 "respiratory burst after phagocytosis" evidence=IMP

GO:2000406 "positive regulation of T cell migration" evidence=IMP

UNIPROTKB|F1SH79 SELK "Selenoprotein K" [Sus scrofa (taxid:9823)]

 Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 23/61 (37%), Positives = 31/61 (50%)

Query:     1 MAYVERGVVKSKRSI--WRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKW 58
             M Y+  G V   RS   WR+S ITDFFW I  F+ +FF T+   +       G  S  ++
Sbjct:     1 MVYISNGQVLDSRSQSPWRLSFITDFFWGIAEFVVLFFRTLLQQDVKKRRGYGGSSDSRY 60

Query:    59 D 59
             D
Sbjct:    61 D 61

GO:2000406 "positive regulation of T cell migration" evidence=IEA

GO:0045728 "respiratory burst after phagocytosis" evidence=IEA

GO:0042102 "positive regulation of T cell proliferation" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

ZFIN|ZDB-GENE-040912-131 selk "selenoprotein K" [Danio rerio (taxid:7955)]

 Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 26/59 (44%), Positives = 34/59 (57%)

Query:     1 MAYVERG-VVKSK-RSIWRISTITDFFWSIINFIGVFFATMFS--MEKSDNYRKGSRSS 55
             M YV  G V+ S+ RS W +S +TDFFW  + FIG+FF T+    + K  N    SR S
Sbjct:     1 MVYVSNGQVLDSRSRSPWSLSFLTDFFWGAVEFIGLFFQTLVQPDLSKDGNNSASSRFS 59

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

RGD|1303129 Selk "selenoprotein K" [Rattus norvegicus (taxid:10116)]

 Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 23/61 (37%), Positives = 30/61 (49%)

Query:     1 MAYVERGVVKSKR--SIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKW 58
             M Y+  G V   R  S WR+S ITDFFW I  F+  FF T+   +       G  S  ++
Sbjct:     1 MVYISNGQVLDSRNQSPWRLSFITDFFWGIAEFVVFFFKTLLQQDVKKRRGYGGSSDSRY 60

Query:    59 D 59
             D
Sbjct:    61 D 61

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=ISO

GO:0006816 "calcium ion transport" evidence=ISO

GO:0006979 "response to oxidative stress" evidence=ISO

GO:0030335 "positive regulation of cell migration" evidence=ISO

GO:0042102 "positive regulation of T cell proliferation" evidence=ISO

GO:0045728 "respiratory burst after phagocytosis" evidence=ISO

GO:2000406 "positive regulation of T cell migration" evidence=ISO

UNIPROTKB|E1C896 SELK "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 24/57 (42%), Positives = 33/57 (57%)

Query:     1 MAYVERGVVKSKRSI--WRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSS 55
             M Y+  G V   RS   W +S ITDFFWSI +F+ +FF ++    + D  R+G  SS
Sbjct:     1 MVYISNGQVLDNRSRAPWSLSAITDFFWSIADFVVMFFQSII---QPDLRRRGYTSS 54

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0042102 "positive regulation of T cell proliferation" evidence=IEA

GO:0045728 "respiratory burst after phagocytosis" evidence=IEA

GO:2000406 "positive regulation of T cell migration" evidence=IEA

DICTYBASE|DDB_G0268720 selk "selenoprotein K" [Dictyostelium discoideum (taxid:44689)]

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 34/110 (30%), Positives = 49/110 (44%)

Query:     3 YVERG-VVKSKRSIWRISTITDFFWSIINFIGVFFATMF--SME--KSDNYRKGSRSSKK 57
             YV  G V ++ RS WR+S I +F W I+N I  FF+T+   ++E  +  N + G R    
Sbjct:     7 YVSGGSVTQTGRSKWRLSYIPEFIWGILNQITFFFSTLIGGTVEPRRRPNNQGGGRRLAG 66

Query:    58 WDXXXXXXXXXXXXXXXXXXXXXXLDNVRGLNDVRGNDHSSLPACGSCCG 107
             +D                       DN  G N+ RG D  ++ AC S  G
Sbjct:    67 FDGNGNVTGGSGVGGSGPSKGP---DN--GSNNRRG-DMKNILACNSASG 110


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.136   0.440    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      108        86   0.00091  102 3  11 22  0.42    29
                                                     29  0.47    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  590 (63 KB)
  Total size of DFA:  122 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.67u 0.11s 7.78t   Elapsed:  00:00:00
  Total cpu time:  7.67u 0.11s 7.78t   Elapsed:  00:00:00
  Start:  Fri May 10 09:04:26 2013   End:  Fri May 10 09:04:26 2013

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pm.C_LG_V0343 SubName- Full=Putative uncharacterized protein; (100 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	108
pfam10961	91	pfam10961, DUF2763, Protein of unknown function (D	1e-20

>gnl|CDD|220915 pfam10961, DUF2763, Protein of unknown function (DUF2763)

 Score = 79.0 bits (195), Expect = 1e-20
 Identities = 42/81 (51%), Positives = 49/81 (60%), Gaps = 3/81 (3%)

Query: 2  AYVERGVVK-SKRSIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKWDG 60
           Y+ RG V    RS WR+S I DFFW I+NFI +FF TMFS + +  YRK S S K+WDG
Sbjct: 1  VYISRGQVLDRSRSPWRLSIIVDFFWGILNFISLFFRTMFSPDVTKRYRKNSSSGKRWDG 60

Query: 61 GPGGPGSGPYGGGGPRGPSRG 81
          G GGPG     GG   G   G
Sbjct: 61 GRGGPGPPG--GGRRMGRIGG 79

This eukaryotic family of proteins has no known function. Length = 91

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	108
PF10961	91	DUF2763: Protein of unknown function (DUF2763); In	99.97
PF10961	91	DUF2763: Protein of unknown function (DUF2763); In	93.8
PF06682	318	DUF1183: Protein of unknown function (DUF1183); In	86.95

>PF10961 DUF2763: Protein of unknown function (DUF2763); InterPro: IPR024491 This entry represents an eukaryotic family of selenoproteins

Probab=99.97  E-value=8.6e-32  Score=185.31  Aligned_cols=88  Identities=48%  Similarity=0.844  Sum_probs=69.1

Q ss_pred             cEEeCCeeee-cCCcchhHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 033941            2 AYVERGVVKS-KRSIWRISTITDFFWSIINFIGVFFATMFSMEKSDNYRKGSRSSKKWDGGPGGPGSGPYGGGGPRGPSR   80 (108)
Q Consensus         2 vYIs~G~V~~-~r~~W~ls~I~d~Fwgi~~fI~lFF~TLfsp~~~~~y~~~~~~~~r~~gG~GggGggg~GgGgg~Gg~~   80 (108)
                      |||++|+|+| |++||+|++|+||||+||+||.|||||||+|+++++++++++++++|.++.|++++           ++
T Consensus         1 vYI~~G~V~e~~rspWrls~I~d~Fwgi~~fI~lFF~Tl~~p~~~~~~~~~~~~~~~~~~G~G~gg~-----------gg   69 (91)
T PF10961_consen    1 VYISNGQVLERKRSPWRLSRITDFFWGIINFIVLFFQTLFSPDSSRSGRKNSSSGSRWSGGGGGGGG-----------GG   69 (91)
T ss_pred             CEeeCCEEeecCCCCccHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCcCCCCCCCCCCCCCCCCC-----------CC
Confidence            7999999999 89999999999999999999999999999999998877666667777664222111           11


Q ss_pred             CCCCCCCCCCCCCCCCCC-CCCCC
Q 033941           81 GLDNVRGLNDVRGNDHSS-LPACG  103 (108)
Q Consensus        81 g~~~~R~~gri~~~~~~~-~p~~G  103 (108)
                         +.|+++++++....+ +||+|
T Consensus        70 ---Gg~~~G~~g~g~G~~~~p~~g   90 (91)
T PF10961_consen   70 ---GGRGMGGGGGGGGPSPPPMGG   90 (91)
T ss_pred             ---CCCCCCCCCCCCCCCCCCCCC
Confidence               345778888888777 45444

It includes SelK, which seems to play an important role in protecting cells from endoplasmic reticulum stress-induced apoptosis [] and SelG, which may be involved in regulating the redox state of the cell [].

>PF10961 DUF2763: Protein of unknown function (DUF2763); InterPro: IPR024491 This entry represents an eukaryotic family of selenoproteins

Probab=93.80  E-value=0.41  Score=32.94  Aligned_cols=24  Identities=17%  Similarity=0.165  Sum_probs=13.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCCcC
Q 033941           21 ITDFFWSIINFIGVFFATMFSMEKS   45 (108)
Q Consensus        21 I~d~Fwgi~~fI~lFF~TLfsp~~~   45 (108)
                      +..++--|..|+.-+|+- ...+..
T Consensus        25 Fwgi~~fI~lFF~Tl~~p-~~~~~~   48 (91)
T PF10961_consen   25 FWGIINFIVLFFQTLFSP-DSSRSG   48 (91)
T ss_pred             HHHHHHHHHHHHHHHhCC-Cccccc
Confidence            444555566677777764 444444

It includes SelK, which seems to play an important role in protecting cells from endoplasmic reticulum stress-induced apoptosis [] and SelG, which may be involved in regulating the redox state of the cell [].

>PF06682 DUF1183: Protein of unknown function (DUF1183); InterPro: IPR009567 This family consists of several eukaryotic proteins of around 360 residues in length

Probab=86.95  E-value=2.3  Score=35.31  Aligned_cols=14  Identities=29%  Similarity=0.643  Sum_probs=6.6

Q ss_pred             HHHHHHHHHHHHHH
Q 033941           23 DFFWSIINFIGVFF   36 (108)
Q Consensus        23 d~Fwgi~~fI~lFF   36 (108)
                      -|||.|+.+|..|+
T Consensus       158 ~lf~ii~l~vla~i  171 (318)
T PF06682_consen  158 WLFWIIFLLVLAFI  171 (318)
T ss_pred             hhhhHHHHHHHHHH
Confidence            44555544444443

The function of this family is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00