Citrus Sinensis ID: 033991


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100------
MGSGFIVGVLGVSILAHAAYSTVQYRGLLKIMEDEFSNPPMNVVIELLLGLVLCMWAALTVPGKFLSIHPDSEENRMVSLPGNLDFMIFNHRAKVFRSEIDMKLKL
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccEEcccccccccccccccccccEEEcccccccccHHHHHHcc
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHcccccccccccEEEEcccccccccccccEEcc
MGSGFIVGVLGVSILAHAAYSTVQYRGLLKIMedefsnppMNVVIELLLGLVLCMWAAltvpgkflsihpdseenrmvslpgnldfmiFNHRAKVFRSEIDMKLKL
MGSGFIVGVLGVSILAHAAYSTVQYRGLLKIMEDEFSNPPMNVVIELLLGLVLCMWAALTVPGKFLSIHPDSEENRMVSLPGNLDFMIFNHRakvfrseidmklkl
MGSGFIVGVLGVSILAHAAYSTVQYRGLLKIMEDEFSNPPMNVVIELLLGLVLCMWAALTVPGKFLSIHPDSEENRMVSLPGNLDFMIFNHRAKVFRSEIDMKLKL
***GFIVGVLGVSILAHAAYSTVQYRGLLKIMEDEFSNPPMNVVIELLLGLVLCMWAALTVPGKFLSIHP*****RMVSLPGNLDFMIFNHRAKVFR*********
***GFIVGVLGVSILAHAAYSTVQYRGLLKIMEDEFSNPPMNVVIELLLGLVLCMWAALTVPGKFLSIHPDSE**R*VSLPGNLDFMIFNHRAKVFRSEIDMKLKL
MGSGFIVGVLGVSILAHAAYSTVQYRGLLKIMEDEFSNPPMNVVIELLLGLVLCMWAALTVPGKFLSIHPDSEENRMVSLPGNLDFMIFNHRAKVFRSEIDMKLKL
*GSGFIVGVLGVSILAHAAYSTVQYRGLLKIMEDEFSNPPMNVVIELLLGLVLCMWAALTVPGKFLSIHPDSEENRMVSLPGNLDFMIFNHRAKVFRSEIDMKLKL
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooo
iiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MGSGFIVGVLGVSILAHAAYSTVQYRGLLKIMEDEFSNPPMNVVIELLLGLVLCMWAALTVPGKFLSIHPDSEENRMVSLPGNLDFMIFNHRAKVFRSEIDMKLKL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query106 2.2.26 [Sep-21-2011]
Q2HIM5104 Membrane magnesium transp yes no 0.981 1.0 0.730 4e-41
Q86J02105 Membrane magnesium transp yes no 0.849 0.857 0.309 2e-06
Q6TLE4130 Membrane magnesium transp yes no 0.924 0.753 0.300 1e-05
Q05AU4132 Membrane magnesium transp N/A no 0.896 0.719 0.262 0.0004
Q28HV5132 Membrane magnesium transp yes no 0.896 0.719 0.262 0.0004
Q6GQ49132 Membrane magnesium transp N/A no 0.896 0.719 0.252 0.0007
>sp|Q2HIM5|MMGT_ARATH Membrane magnesium transporter OS=Arabidopsis thaliana GN=At5g03345 PE=2 SV=1 Back     alignment and function desciption
 Score =  166 bits (420), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 76/104 (73%), Positives = 89/104 (85%)

Query: 1   MGSGFIVGVLGVSILAHAAYSTVQYRGLLKIMEDEFSNPPMNVVIELLLGLVLCMWAALT 60
           M  GF+VGV GV IL+HAAYST+QYRGLLKIME+EFS PP+NV++EL++GL LCMWAALT
Sbjct: 1   MNLGFLVGVFGVLILSHAAYSTIQYRGLLKIMEEEFSRPPINVILELIIGLALCMWAALT 60

Query: 61  VPGKFLSIHPDSEENRMVSLPGNLDFMIFNHRAKVFRSEIDMKL 104
            PGKFLSIHPDS+ENR V LP N DFMIFNHR ++F  +IDMK 
Sbjct: 61  FPGKFLSIHPDSDENRAVFLPDNSDFMIFNHRGRLFPPQIDMKF 104




Mediates Mg(2+) transport.
Arabidopsis thaliana (taxid: 3702)
>sp|Q86J02|MMGT_DICDI Membrane magnesium transporter homolog OS=Dictyostelium discoideum GN=mmgt PE=3 SV=1 Back     alignment and function description
>sp|Q6TLE4|MMGT1_DANRE Membrane magnesium transporter 1 OS=Danio rerio GN=mmgt1 PE=2 SV=1 Back     alignment and function description
>sp|Q05AU4|MMG1B_XENLA Membrane magnesium transporter 1-B OS=Xenopus laevis GN=mmgt1-b PE=2 SV=1 Back     alignment and function description
>sp|Q28HV5|MMGT1_XENTR Membrane magnesium transporter 1 OS=Xenopus tropicalis GN=mmgt1 PE=2 SV=1 Back     alignment and function description
>sp|Q6GQ49|MMG1A_XENLA Membrane magnesium transporter 1-A OS=Xenopus laevis GN=mmgt1-a PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query106
255556948106 conserved hypothetical protein [Ricinus 0.990 0.990 0.809 6e-44
225440053106 PREDICTED: uncharacterized protein LOC10 0.990 0.990 0.809 4e-43
351725531106 uncharacterized protein LOC100305468 [Gl 0.990 0.990 0.8 3e-42
224068765108 predicted protein [Populus trichocarpa] 0.962 0.944 0.794 5e-42
356533211106 PREDICTED: uncharacterized protein LOC10 0.990 0.990 0.771 3e-41
21592319104 unknown [Arabidopsis thaliana] 0.981 1.0 0.740 3e-40
297806289104 hypothetical protein ARALYDRAFT_487108 [ 0.981 1.0 0.740 3e-40
18414195104 uncharacterized protein [Arabidopsis tha 0.981 1.0 0.730 2e-39
388508954107 unknown [Medicago truncatula] 0.971 0.962 0.728 4e-38
413968480105 hypothetical protein [Solanum tuberosum] 0.990 1.0 0.685 1e-37
>gi|255556948|ref|XP_002519507.1| conserved hypothetical protein [Ricinus communis] gi|223541370|gb|EEF42921.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  181 bits (458), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 85/105 (80%), Positives = 93/105 (88%)

Query: 1   MGSGFIVGVLGVSILAHAAYSTVQYRGLLKIMEDEFSNPPMNVVIELLLGLVLCMWAALT 60
           MG GFI+G  G  ILAHAAYST+QYRGLLKIME+EF+ PPMNVVIELLLGLVLCMWAALT
Sbjct: 1   MGLGFIIGAFGTLILAHAAYSTIQYRGLLKIMEEEFAGPPMNVVIELLLGLVLCMWAALT 60

Query: 61  VPGKFLSIHPDSEENRMVSLPGNLDFMIFNHRAKVFRSEIDMKLK 105
            PGKFLSIHP SEENR+VSLP N+DFMIFNHR KV  SE++MKLK
Sbjct: 61  APGKFLSIHPHSEENRIVSLPDNMDFMIFNHRGKVLPSEVEMKLK 105




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440053|ref|XP_002282209.1| PREDICTED: uncharacterized protein LOC100260191 [Vitis vinifera] gi|297741638|emb|CBI32770.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|351725531|ref|NP_001235816.1| uncharacterized protein LOC100305468 [Glycine max] gi|255625597|gb|ACU13143.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|224068765|ref|XP_002326194.1| predicted protein [Populus trichocarpa] gi|118485409|gb|ABK94561.1| unknown [Populus trichocarpa] gi|118489191|gb|ABK96402.1| unknown [Populus trichocarpa x Populus deltoides] gi|222833387|gb|EEE71864.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356533211|ref|XP_003535160.1| PREDICTED: uncharacterized protein LOC100804998 [Glycine max] Back     alignment and taxonomy information
>gi|21592319|gb|AAM64270.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297806289|ref|XP_002871028.1| hypothetical protein ARALYDRAFT_487108 [Arabidopsis lyrata subsp. lyrata] gi|297316865|gb|EFH47287.1| hypothetical protein ARALYDRAFT_487108 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18414195|ref|NP_568115.1| uncharacterized protein [Arabidopsis thaliana] gi|122197844|sp|Q2HIM5.1|MMGT_ARATH RecName: Full=Membrane magnesium transporter; AltName: Full=ER membrane protein complex subunit 5 homolog; Flags: Precursor gi|88011052|gb|ABD38895.1| At5g03345 [Arabidopsis thaliana] gi|332003205|gb|AED90588.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|388508954|gb|AFK42543.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|413968480|gb|AFW90577.1| hypothetical protein [Solanum tuberosum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query106
TAIR|locus:505006578104 AT5G03345 "AT5G03345" [Arabido 0.971 0.990 0.737 6.1e-39
ZFIN|ZDB-GENE-040801-65130 mmgt1 "membrane magnesium tran 0.924 0.753 0.339 3.5e-11
UNIPROTKB|Q05AU4132 mmgt1-b "Membrane magnesium tr 0.896 0.719 0.303 1.1e-09
UNIPROTKB|Q28HV5132 mmgt1 "Membrane magnesium tran 0.896 0.719 0.303 1.1e-09
MGI|MGI:2384305131 Mmgt1 "membrane magnesium tran 0.858 0.694 0.336 1.4e-09
RGD|1566339131 Mmgt1 "membrane magnesium tran 0.858 0.694 0.336 1.4e-09
UNIPROTKB|F1NCI2130 MMGT1 "Uncharacterized protein 0.867 0.707 0.333 1.8e-09
UNIPROTKB|Q8N4V1131 MMGT1 "Membrane magnesium tran 0.858 0.694 0.326 1.8e-09
UNIPROTKB|F1RTC2131 MMGT1 "Uncharacterized protein 0.858 0.694 0.326 1.8e-09
UNIPROTKB|Q6GQ49132 mmgt1-a "Membrane magnesium tr 0.896 0.719 0.292 1.8e-09
TAIR|locus:505006578 AT5G03345 "AT5G03345" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 76/103 (73%), Positives = 89/103 (86%)

Query:     1 MGSGFIVGVLGVSILAHAAYSTVQYRGLLKIMEDEFSNPPMNVVIELLLGLVLCMWAALT 60
             M  GF+VGV GV IL+HAAYST+QYRGLLKIME+EFS PP+NV++EL++GL LCMWAALT
Sbjct:     1 MNLGFLVGVFGVLILSHAAYSTIQYRGLLKIMEEEFSRPPINVILELIIGLALCMWAALT 60

Query:    61 VPGKFLSIHPDSEENRMVSLPGNLDFMIFNHRAKVFRSEIDMK 103
              PGKFLSIHPDS+ENR V LP N DFMIFNHR ++F  +IDMK
Sbjct:    61 FPGKFLSIHPDSDENRAVFLPDNSDFMIFNHRGRLFPPQIDMK 103




GO:0003674 "molecular_function" evidence=ND
GO:0005739 "mitochondrion" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA
GO:0005783 "endoplasmic reticulum" evidence=IDA
ZFIN|ZDB-GENE-040801-65 mmgt1 "membrane magnesium transporter 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q05AU4 mmgt1-b "Membrane magnesium transporter 1-B" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|Q28HV5 mmgt1 "Membrane magnesium transporter 1" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms
MGI|MGI:2384305 Mmgt1 "membrane magnesium transporter 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1566339 Mmgt1 "membrane magnesium transporter 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1NCI2 MMGT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q8N4V1 MMGT1 "Membrane magnesium transporter 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RTC2 MMGT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q6GQ49 mmgt1-a "Membrane magnesium transporter 1-A" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q86J02MMGT_DICDINo assigned EC number0.30920.84900.8571yesno
Q2HIM5MMGT_ARATHNo assigned EC number0.73070.98111.0yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00023236001
SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (106 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 106
KOG3918129 consensus Predicted membrane protein [Function unk 100.0
PF10270106 MMgT: Membrane magnesium transporter; InterPro: IP 100.0
>KOG3918 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
Probab=100.00  E-value=1.1e-35  Score=208.58  Aligned_cols=103  Identities=26%  Similarity=0.437  Sum_probs=98.4

Q ss_pred             Cc--hhhHHHHHHHHHHHHHHHhHHHHHHHhhhhcCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCceecCccccc--CC
Q 033991            1 MG--SGFIVGVLGVSILAHAAYSTVQYRGLLKIMEDEFSNPPMNVVIELLLGLVLCMWAALTVPGKFLSIHPDSEE--NR   76 (106)
Q Consensus         1 M~--~s~~l~~vG~llL~HA~YSa~e~r~~lk~~~~~~~~lP~DI~~E~l~~~~l~~~G~v~~a~~fk~I~~~~e~--~~   76 (106)
                      |+  +.+.++.+|++.|+||||||.|||.|++++|+|+.+||.||++|+++++++.|+|++..+|+||.|++++++  ++
T Consensus         1 Mas~l~~~l~~i~lfaLaHaAfSAAqHR~YlRLTEqe~~sLP~DivlQTvisli~~iYgi~~iag~Fk~i~at~~~~~kt   80 (129)
T KOG3918|consen    1 MASTLYRLLTIISLFALAHAAFSAAQHRFYLRLTEQEFISLPSDIVLQTVISLIALIYGISFIAGPFKFIKATDQHHDKT   80 (129)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcHHHHHHHHHHHHHHHHhHHHHcchHHhhhhHHHHhhhh
Confidence            66  889999999999999999999999999999999999999999999999999999999999999999998875  69


Q ss_pred             cccCCCCCCceeecccccccccchhhh
Q 033991           77 MVSLPGNLDFMIFNHRAKVFRSEIDMK  103 (106)
Q Consensus        77 ~d~~~~r~~F~~fnhRg~~l~~~~~~~  103 (106)
                      ||++.|.|+|++||||||+++|++.|.
T Consensus        81 ~Dtl~N~PSFy~FnhRgral~P~~t~~  107 (129)
T KOG3918|consen   81 CDTLLNCPSFYTFNHRGRALSPEFTML  107 (129)
T ss_pred             HHHHhCCCceEeecccccccCcccccc
Confidence            999999999999999999999988764



>PF10270 MMgT: Membrane magnesium transporter; InterPro: IPR018937 This entry represents a novel family of membrane magnesium transporters (MMgT) [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00