Citrus Sinensis ID: 034030
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 105 | ||||||
| 224089721 | 105 | predicted protein [Populus trichocarpa] | 1.0 | 1.0 | 0.904 | 2e-48 | |
| 297804546 | 106 | hypothetical protein ARALYDRAFT_915104 [ | 0.971 | 0.962 | 0.892 | 1e-46 | |
| 224137260 | 105 | predicted protein [Populus trichocarpa] | 0.990 | 0.990 | 0.894 | 1e-46 | |
| 21553735 | 106 | unknown [Arabidopsis thaliana] | 0.971 | 0.962 | 0.882 | 4e-46 | |
| 315937234 | 102 | hypothetical protein [Jatropha curcas] | 0.971 | 1.0 | 0.892 | 6e-46 | |
| 186511907 | 106 | uncharacterized protein [Arabidopsis tha | 0.971 | 0.962 | 0.882 | 6e-46 | |
| 2245001 | 106 | hypothetical protein [Arabidopsis thalia | 0.971 | 0.962 | 0.882 | 1e-45 | |
| 351720975 | 101 | uncharacterized protein LOC100306111 [Gl | 0.961 | 1.0 | 0.871 | 5e-45 | |
| 388513791 | 101 | unknown [Lotus japonicus] | 0.961 | 1.0 | 0.871 | 8e-45 | |
| 147799661 | 116 | hypothetical protein VITISV_010564 [Viti | 0.952 | 0.862 | 0.87 | 1e-44 |
| >gi|224089721|ref|XP_002308803.1| predicted protein [Populus trichocarpa] gi|118482707|gb|ABK93272.1| unknown [Populus trichocarpa] gi|118483785|gb|ABK93785.1| unknown [Populus trichocarpa] gi|222854779|gb|EEE92326.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/105 (90%), Positives = 99/105 (94%)
Query: 1 MNTDITASEKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIKPGLKGP 60
MNTDITAS KP+YPVIDRNP FT VVGNFNTLDY RF ++TGVSV VGYLSGIKPG+KGP
Sbjct: 1 MNTDITASAKPEYPVIDRNPEFTKVVGNFNTLDYCRFITLTGVSVTVGYLSGIKPGIKGP 60
Query: 61 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYQKRGFSS 105
SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYQKRGFSS
Sbjct: 61 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYQKRGFSS 105
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297804546|ref|XP_002870157.1| hypothetical protein ARALYDRAFT_915104 [Arabidopsis lyrata subsp. lyrata] gi|297315993|gb|EFH46416.1| hypothetical protein ARALYDRAFT_915104 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|224137260|ref|XP_002322513.1| predicted protein [Populus trichocarpa] gi|222867143|gb|EEF04274.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|21553735|gb|AAM62828.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|315937234|gb|ADU56175.1| hypothetical protein [Jatropha curcas] | Back alignment and taxonomy information |
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| >gi|186511907|ref|NP_567500.2| uncharacterized protein [Arabidopsis thaliana] gi|334186608|ref|NP_001190742.1| uncharacterized protein [Arabidopsis thaliana] gi|28416547|gb|AAO42804.1| At4g16450 [Arabidopsis thaliana] gi|110742933|dbj|BAE99362.1| hypothetical protein [Arabidopsis thaliana] gi|332658352|gb|AEE83752.1| uncharacterized protein [Arabidopsis thaliana] gi|332658353|gb|AEE83753.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|2245001|emb|CAB10421.1| hypothetical protein [Arabidopsis thaliana] gi|7268395|emb|CAB78687.1| hypothetical protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|351720975|ref|NP_001237706.1| uncharacterized protein LOC100306111 [Glycine max] gi|356555750|ref|XP_003546193.1| PREDICTED: uncharacterized protein LOC100819728 [Glycine max] gi|255627585|gb|ACU14137.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|388513791|gb|AFK44957.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
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| >gi|147799661|emb|CAN72866.1| hypothetical protein VITISV_010564 [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 105 | ||||||
| TAIR|locus:2130649 | 106 | AT4G16450 "AT4G16450" [Arabido | 0.990 | 0.981 | 0.876 | 6.2e-46 | |
| CGD|CAL0003931 | 204 | orf19.6607 [Candida albicans ( | 0.790 | 0.406 | 0.333 | 4.5e-06 | |
| UNIPROTKB|Q59NK8 | 204 | CaO19.6607 "Putative uncharact | 0.790 | 0.406 | 0.333 | 4.5e-06 | |
| UNIPROTKB|G5EHK5 | 189 | MGCH7_ch7g169 "Uncharacterized | 0.904 | 0.502 | 0.308 | 1.7e-05 | |
| ASPGD|ASPL0000063679 | 189 | AN6976 [Emericella nidulans (t | 0.790 | 0.439 | 0.325 | 0.00043 |
| TAIR|locus:2130649 AT4G16450 "AT4G16450" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 92/105 (87%), Positives = 98/105 (93%)
Query: 1 MNTDITASEKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIKPGLKGP 60
MNTDITA EK QYPV+DRNP FT VVGNF+TLDYLRFS+ITG+SV VGYLSGIKPG+KGP
Sbjct: 1 MNTDITALEKAQYPVVDRNPAFTKVVGNFSTLDYLRFSTITGISVTVGYLSGIKPGIKGP 60
Query: 61 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYQKRG-FS 104
SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVA YQKRG FS
Sbjct: 61 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVASYQKRGGFS 105
|
|
| CGD|CAL0003931 orf19.6607 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q59NK8 CaO19.6607 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G5EHK5 MGCH7_ch7g169 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000063679 AN6976 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| eugene3.00060155 | SubName- Full=Putative uncharacterized protein; (105 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 105 | |||
| PLN02975 | 97 | PLN02975, PLN02975, complex I subunit | 3e-57 | |
| pfam10785 | 84 | pfam10785, NADH-u_ox-rdase, NADH-ubiquinone oxidor | 3e-27 |
| >gnl|CDD|166616 PLN02975, PLN02975, complex I subunit | Back alignment and domain information |
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Score = 171 bits (434), Expect = 3e-57
Identities = 85/97 (87%), Positives = 93/97 (95%)
Query: 4 DITASEKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIKPGLKGPSMV 63
DITAS+KP+YPV+DRNP FT VVGNF+ LDYLRF++ITGVSV VGYLSGIKPG++GPSMV
Sbjct: 1 DITASDKPEYPVVDRNPTFTKVVGNFSALDYLRFATITGVSVTVGYLSGIKPGIRGPSMV 60
Query: 64 TGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYQK 100
TGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYQK
Sbjct: 61 TGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYQK 97
|
Length = 97 |
| >gnl|CDD|192666 pfam10785, NADH-u_ox-rdase, NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 105 | |||
| PLN02975 | 97 | complex I subunit | 100.0 | |
| PF10785 | 86 | NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase co | 100.0 |
| >PLN02975 complex I subunit | Back alignment and domain information |
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Probab=100.00 E-value=8.4e-50 Score=275.55 Aligned_cols=97 Identities=88% Similarity=1.471 Sum_probs=94.4
Q ss_pred cccCCCCCCCCcccCCCCchhhhhccChhHHHHHHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Q 034030 4 DITASEKPQYPVIDRNPPFTAVVGNFNTLDYLRFSSITGVSVVVGYLSGIKPGLKGPSMVTGGLIGLMGGFMYAYQNSAG 83 (105)
Q Consensus 4 ~i~~~~~p~YPvId~dP~f~rVv~nfR~sDy~~~a~~ta~~~~~~y~~~~~~~~~~p~m~~~~~iG~~gGfl~ayqrS~~ 83 (105)
+|+..++|+|||||+||||+||++|||+|||++|+++|+++|+++|+.+.+|+.++|+|+++++||++||||+|||||++
T Consensus 1 ~~~~~~~P~YPlId~dP~f~rVv~yfr~sDY~~~a~~ta~s~~~~~~~~~~~~~~~~~mr~ag~iG~~gGf~~aYq~S~~ 80 (97)
T PLN02975 1 DITASDKPEYPVVDRNPTFTKVVGNFSALDYLRFATITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAG 80 (97)
T ss_pred CCcccCCCCCCccCCCCChHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccCccccchHHHHHHHHHHhhhHHhhhcccch
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCHHHHHHhhh
Q 034030 84 RLMGFFPNEGEVARYQK 100 (105)
Q Consensus 84 Rl~G~~EN~rEv~ry~~ 100 (105)
|||||+||+||||+|+.
T Consensus 81 Rf~G~~EN~rEV~~~~~ 97 (97)
T PLN02975 81 RLMGFFPNEGEVARYQK 97 (97)
T ss_pred hhcCCCCCHHHHHhccC
Confidence 99999999999999983
|
|
| >PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [] | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00