Citrus Sinensis ID: 034141

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100---
Protein Sequence
MSSHNNSNDPRQPSAAKPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGTKS
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
msshnnsndprqpsaakpyvstavapedlpvdysGFIAVIFGLAGVMFRYKLCSWLAIICCAQSLANMRNMETDLKQISMAMMFALMGLVTnylgparpgtks
Flexible Loop (DISEMBL)
msshnnsndprqpsaakPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIICCAQSLANMRNMETDLKQISMAMMFALMGLVTNylgparpgtks
Low Complexity Region (SEG)
MSSHNNSNDPRQPSAAKPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGTKS
Disordered region (IsUnstruct)
**********************AVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLG********
Disordered Region (DISOPRED)
*******************************DYSGFIAVIFGLAGVMFRYKLCSWLAIICCAQSLAN*********QISMAMMFALMGLVTNY***A******
Disordered Region (DISEMBL)
*******************VSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLG********
Disordered Region (DISPRO)
******************YVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPA******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSSHNNSNDPRQPSAAKPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGTKS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	103	2.2.26 [Sep-21-2011]
Q9SD88	107	Protein Asterix OS=Arabid	yes	no	0.970	0.934	0.815	2e-44
Q86H65	98	Protein Asterix OS=Dictyo	yes	no	0.864	0.908	0.296	4e-11
Q9U516	108	Protein Asterix OS=Manduc	N/A	no	0.893	0.851	0.354	3e-10
Q6ZWX0	106	Protein Asterix OS=Mus mu	yes	no	0.951	0.924	0.359	1e-09
Q9Y284	106	Protein Asterix OS=Homo s	yes	no	0.951	0.924	0.359	1e-09
Q2M2T6	106	Protein Asterix OS=Bos ta	yes	no	0.951	0.924	0.359	2e-09
Q6Q7K0	106	Protein Asterix OS=Sus sc	yes	no	0.951	0.924	0.349	9e-09
F8RT80	101	Protein Asterix OS=Gallus	yes	no	0.873	0.891	0.326	1e-08
Q09993	113	Protein Asterix OS=Caenor	yes	no	0.864	0.787	0.363	2e-08
Q9VRJ8	108	Protein Asterix OS=Drosop	yes	no	0.864	0.824	0.302	3e-06

>sp|Q9SD88|ASTER_ARATH Protein Asterix OS=Arabidopsis thaliana GN=At5g07960 PE=3 SV=1

 Score =  177 bits (448), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 84/103 (81%), Positives = 91/103 (88%), Gaps = 3/103 (2%)

Query: 3   SHNNS---NDPRQPSAAKPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAII 59
           SH N+   NDPRQPSAAKPY+   VAPEDLPVDYSGFIAVI G++GVMFRYK+CSWLAII
Sbjct: 4   SHGNASSVNDPRQPSAAKPYIPRPVAPEDLPVDYSGFIAVILGVSGVMFRYKICSWLAII 63

Query: 60  CCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGTK 102
            CAQSLANMRN+E DLKQISMAMMFA+MGLVTNYLGP RP TK
Sbjct: 64  FCAQSLANMRNLENDLKQISMAMMFAIMGLVTNYLGPNRPATK 106

Arabidopsis thaliana (taxid: 3702)

>sp|Q86H65|ASTER_DICDI Protein Asterix OS=Dictyostelium discoideum GN=DDB_G0275849 PE=3 SV=1

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 54/91 (59%), Gaps = 2/91 (2%)

Query: 8  NDPRQPS--AAKPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIICCAQSL 65
          +DPR+ S    +  +  +  P++  ++     ++IFG  G+M +YK+C W++ +CC   L
Sbjct: 2  SDPRKESLIVERFEMRASTEPKEGELELYSLFSIIFGFLGIMLKYKICLWVSAVCCVAYL 61

Query: 66 ANMRNMETDLKQISMAMMFALMGLVTNYLGP 96
          +N+++ ++ ++ I   +  +LMGLV  Y GP
Sbjct: 62 SNLKSKDSSVRTILSPVSLSLMGLVMAYFGP 92

Dictyostelium discoideum (taxid: 44689)

>sp|Q9U516|ASTER_MANSE Protein Asterix OS=Manduca sexta PE=3 SV=1

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 4/96 (4%)

Query: 7  SNDPRQPSAA---KPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIICCAQ 63
          ++DPR+       KP  ST    EDL  DY   + ++F + G+M R K C+W A+ C + 
Sbjct: 4  TSDPRRADRERRYKPPPSTTAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSSI 63

Query: 64 SLANMRNMETDLKQISMAMMFALMGLVTNYLGPARP 99
          S AN R +  D KQI  + M ++  +V +YL    P
Sbjct: 64 SFANSR-VSDDTKQIVSSFMLSISAVVMSYLQNPSP 98

Manduca sexta (taxid: 7130)

>sp|Q6ZWX0|ASTER_MOUSE Protein Asterix OS=Mus musculus GN=Wdr83os PE=2 SV=1

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 5/103 (4%)

Query: 3   SHNNSNDPRQPSAA---KPYVSTAVAPEDLPV-DYSGFIAVIFGLAGVMFRYKLCSWLAI 58
           S NN +DPR+P+     KP  S      D P  DY   + +IF + G+M + K C+W+A+
Sbjct: 2   STNNMSDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAWVAV 61

Query: 59  ICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGT 101
            C   S AN R+ E D KQ+  + M ++  +V +YL   +P T
Sbjct: 62  YCSFISFANSRSSE-DTKQMMSSFMLSISAVVMSYLQNPQPMT 103

Mus musculus (taxid: 10090)

>sp|Q9Y284|ASTER_HUMAN Protein Asterix OS=Homo sapiens GN=WDR83OS PE=2 SV=1

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 5/103 (4%)

Query: 3   SHNNSNDPRQPSAA---KPYVSTAVAPEDLPV-DYSGFIAVIFGLAGVMFRYKLCSWLAI 58
           S NN +DPR+P+     KP  S      D P  DY   + +IF + G+M + K C+W+A+
Sbjct: 2   STNNMSDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAWVAV 61

Query: 59  ICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGT 101
            C   S AN R+ E D KQ+  + M ++  +V +YL   +P T
Sbjct: 62  YCSFISFANSRSSE-DTKQMMSSFMLSISAVVMSYLQNPQPMT 103

Homo sapiens (taxid: 9606)

>sp|Q2M2T6|ASTER_BOVIN Protein Asterix OS=Bos taurus GN=WDR83OS PE=3 SV=1

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 5/103 (4%)

Query: 3   SHNNSNDPRQPSAA---KPYVSTAVAPEDLPV-DYSGFIAVIFGLAGVMFRYKLCSWLAI 58
           S NN +DPR+P+     KP  S      D P  DY   + +IF + G+M + K C+W+A+
Sbjct: 2   SANNMSDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAWVAV 61

Query: 59  ICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGT 101
            C   S AN R+ E D KQ+  + M ++  +V +YL   +P T
Sbjct: 62  YCSFISFANSRSSE-DTKQMMSSFMLSISAVVMSYLQNPQPMT 103

Bos taurus (taxid: 9913)

>sp|Q6Q7K0|ASTER_PIG Protein Asterix OS=Sus scrofa GN=WDR83OS PE=2 SV=1

 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 5/103 (4%)

Query: 3   SHNNSNDPRQPSAA---KPYVSTAVAPEDLPV-DYSGFIAVIFGLAGVMFRYKLCSWLAI 58
           S N+ +DPR P+     KP  S      D P  DY   + +IF + G+M + K C+W+A+
Sbjct: 2   SANSMSDPRSPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAWVAV 61

Query: 59  ICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGT 101
            C   S AN R+ E D KQ+  + M ++  +V +YL   +P T
Sbjct: 62  YCSFISFANSRSSE-DTKQMMSSFMLSISAVVMSYLQNPQPMT 103

Sus scrofa (taxid: 9823)

>sp|F8RT80|ASTER_CHICK Protein Asterix OS=Gallus gallus GN=WDR83OS PE=2 SV=1

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 5/95 (5%)

Query: 9  DPRQPSAAK----PYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIICCAQS 64
          DPR+P+       P   +  A ED   DY   + ++F + G+M + K C+W+A+ C   S
Sbjct: 3  DPRRPARVTRYKPPTTESNPALEDPTPDYMNLLGMVFSMCGLMLKLKWCAWIAVYCSFIS 62

Query: 65 LANMRNMETDLKQISMAMMFALMGLVTNYLGPARP 99
           AN R+ E D KQ+  + M ++  +V +YL   +P
Sbjct: 63 FANSRSSE-DTKQMMSSFMLSISAVVMSYLQNPQP 96

Gallus gallus (taxid: 9031)

>sp|Q09993|ASTER_CAEEL Protein Asterix OS=Caenorhabditis elegans GN=K10B2.4 PE=3 SV=1

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 10/99 (10%)

Query: 9   DPRQPSAA---KPYVSTA-----VAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIIC 60
           DPR+ +     KP  STA     ++ + LP +Y   + +IF + G+M R K CSWLA++C
Sbjct: 6   DPRRTNRIVRYKPLDSTANQQQAISEDPLP-EYMNVLGMIFSMCGLMIRMKWCSWLALVC 64

Query: 61  CAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARP 99
              S AN R  + D KQI  + M ++  +V +YL    P
Sbjct: 65  SCISFANTRTSD-DAKQIVSSFMLSVSAVVMSYLQNPSP 102

Caenorhabditis elegans (taxid: 6239)

>sp|Q9VRJ8|ASTER_DROME Protein Asterix OS=Drosophila melanogaster GN=CG10674 PE=1 SV=1

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 7/96 (7%)

Query: 5  NNSNDPRQPSAAKPYVS------TAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAI 58
          N + DPR+      Y +      +  A ED+  DY   + +IF + G+M + K C+W A+
Sbjct: 2  NMTVDPRRKEKINRYKAPKNQGQSGGANEDMMPDYMNILGMIFSMCGLMMKLKWCAWFAL 61

Query: 59 ICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYL 94
           C   S A+ R  + D KQ+  + M ++  +V +YL
Sbjct: 62 YCSCISFASSRASD-DAKQVLSSFMLSVSAVVMSYL 96

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	103
224130068	107	predicted protein [Populus trichocarpa]	1.0	0.962	0.794	2e-43
15241477	107	uncharacterized protein [Arabidopsis tha	0.970	0.934	0.815	8e-43
449440838	101	PREDICTED: protein Asterix-like isoform	0.951	0.970	0.826	4e-42
297806827	107	hypothetical protein ARALYDRAFT_487629 [	0.970	0.934	0.805	2e-41
224119004	107	predicted protein [Populus trichocarpa]	1.0	0.962	0.747	3e-41
118484896	107	unknown [Populus trichocarpa]	1.0	0.962	0.738	1e-40
359491653	109	PREDICTED: UPF0139 membrane protein At5g	0.990	0.935	0.768	2e-40
351724551	101	uncharacterized protein LOC100500245 [Gl	0.961	0.980	0.737	1e-39
388509398	101	unknown [Medicago truncatula]	0.980	1.0	0.718	2e-38
449440836	133	PREDICTED: protein Asterix-like isoform	0.961	0.744	0.618	1e-37

>gi|224130068|ref|XP_002328646.1| predicted protein [Populus trichocarpa] gi|222838822|gb|EEE77173.1| predicted protein [Populus trichocarpa]

 Score =  179 bits (453), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 85/107 (79%), Positives = 96/107 (89%), Gaps = 4/107 (3%)

Query: 1   MSSHNN----SNDPRQPSAAKPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWL 56
           MSSHNN    +NDPRQP AAKP+V+  V+P+DLPVDYSGFIAVI G+AGVMFRYKLCSWL
Sbjct: 1   MSSHNNNSASANDPRQPLAAKPFVAPMVSPQDLPVDYSGFIAVILGVAGVMFRYKLCSWL 60

Query: 57  AIICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGTKS 103
           A+I CAQSL+NMRNME DLKQISMA MFA+MGLVTNYLGPARPG++S
Sbjct: 61  ALIFCAQSLSNMRNMENDLKQISMASMFAIMGLVTNYLGPARPGSQS 107

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15241477|ref|NP_196413.1| uncharacterized protein [Arabidopsis thaliana] gi|12585380|sp|Q9SD88.1|ASTER_ARATH RecName: Full=Protein Asterix gi|6562310|emb|CAB62608.1| putative protein [Arabidopsis thaliana] gi|10176730|dbj|BAB09960.1| unnamed protein product [Arabidopsis thaliana] gi|21592346|gb|AAM64297.1| unknown [Arabidopsis thaliana] gi|28416537|gb|AAO42799.1| At5g07960 [Arabidopsis thaliana] gi|110742986|dbj|BAE99387.1| hypothetical protein [Arabidopsis thaliana] gi|332003846|gb|AED91229.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  177 bits (448), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 84/103 (81%), Positives = 91/103 (88%), Gaps = 3/103 (2%)

Query: 3   SHNNS---NDPRQPSAAKPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAII 59
           SH N+   NDPRQPSAAKPY+   VAPEDLPVDYSGFIAVI G++GVMFRYK+CSWLAII
Sbjct: 4   SHGNASSVNDPRQPSAAKPYIPRPVAPEDLPVDYSGFIAVILGVSGVMFRYKICSWLAII 63

Query: 60  CCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGTK 102
            CAQSLANMRN+E DLKQISMAMMFA+MGLVTNYLGP RP TK
Sbjct: 64  FCAQSLANMRNLENDLKQISMAMMFAIMGLVTNYLGPNRPATK 106

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440838|ref|XP_004138191.1| PREDICTED: protein Asterix-like isoform 2 [Cucumis sativus]

 Score =  175 bits (443), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 81/98 (82%), Positives = 89/98 (90%)

Query: 6   NSNDPRQPSAAKPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIICCAQSL 65
            +NDPRQPSA KP+V+ AV P+DLPVDYSGFIAV+FG+AGVMFRYKL SWLAII CAQSL
Sbjct: 4   QANDPRQPSAVKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSL 63

Query: 66  ANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGTKS 103
           ANMRN+E DLKQISMAMMFA+MGLVTNYL PARPG KS
Sbjct: 64  ANMRNIENDLKQISMAMMFAIMGLVTNYLSPARPGAKS 101

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806827|ref|XP_002871297.1| hypothetical protein ARALYDRAFT_487629 [Arabidopsis lyrata subsp. lyrata] gi|297317134|gb|EFH47556.1| hypothetical protein ARALYDRAFT_487629 [Arabidopsis lyrata subsp. lyrata]

 Score =  172 bits (437), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 83/103 (80%), Positives = 89/103 (86%), Gaps = 3/103 (2%)

Query: 3   SHNNS---NDPRQPSAAKPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAII 59
           SH N+   NDPR PSAAKPY    VAPEDLPVDYSGFIAVI G++GVMFRYK+CSWLAII
Sbjct: 4   SHGNASSANDPRLPSAAKPYTPRPVAPEDLPVDYSGFIAVILGVSGVMFRYKICSWLAII 63

Query: 60  CCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGTK 102
            CAQSLANMRN+E DLKQISMAMMFA+MGLVTNYLGP RP TK
Sbjct: 64  FCAQSLANMRNLENDLKQISMAMMFAIMGLVTNYLGPNRPATK 106

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224119004|ref|XP_002317962.1| predicted protein [Populus trichocarpa] gi|118483449|gb|ABK93624.1| unknown [Populus trichocarpa] gi|222858635|gb|EEE96182.1| predicted protein [Populus trichocarpa]

 Score =  172 bits (435), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 80/107 (74%), Positives = 95/107 (88%), Gaps = 4/107 (3%)

Query: 1   MSSHNN----SNDPRQPSAAKPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWL 56
           MSSHNN    +NDPRQPSA+K +++  V+P+D+PVDYSGF+AVI G+AGVMFRYKLCSWL
Sbjct: 1   MSSHNNNPASANDPRQPSASKSFLAPMVSPQDVPVDYSGFVAVILGVAGVMFRYKLCSWL 60

Query: 57  AIICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGTKS 103
           A+I CAQSL+NMRNME DLKQISMA MFA+MGLVTNYLGPARP ++S
Sbjct: 61  ALIFCAQSLSNMRNMENDLKQISMASMFAIMGLVTNYLGPARPASQS 107

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118484896|gb|ABK94314.1| unknown [Populus trichocarpa]

 Score =  169 bits (429), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 79/107 (73%), Positives = 95/107 (88%), Gaps = 4/107 (3%)

Query: 1   MSSHN----NSNDPRQPSAAKPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWL 56
           MSSHN    ++NDPRQPSA+K +++  V+P+D+PVDYSGF+AVI G+AGVMFRYKLCSWL
Sbjct: 1   MSSHNYNPASANDPRQPSASKSFLAPMVSPQDVPVDYSGFVAVILGVAGVMFRYKLCSWL 60

Query: 57  AIICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGTKS 103
           A+I CAQSL+NMRNME DLKQISMA MFA+MGLVTNYLGPARP ++S
Sbjct: 61  ALIFCAQSLSNMRNMENDLKQISMASMFAIMGLVTNYLGPARPASQS 107

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491653|ref|XP_002284280.2| PREDICTED: UPF0139 membrane protein At5g07960-like [Vitis vinifera] gi|297733892|emb|CBI15139.3| unnamed protein product [Vitis vinifera]

 Score =  169 bits (428), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 83/108 (76%), Positives = 90/108 (83%), Gaps = 6/108 (5%)

Query: 1   MSSHNNS----NDPRQPSAAKPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWL 56
           MSSHNNS    NDPRQPS A PYV+  V PEDLPVDYSGFIAVIF + G+MFRYKLCSWL
Sbjct: 1   MSSHNNSSPAVNDPRQPSTANPYVAPMVRPEDLPVDYSGFIAVIFAIVGLMFRYKLCSWL 60

Query: 57  AIICCAQSLANMRNMETDLKQISMAMMFALMGLVTNY--LGPARPGTK 102
           AII CAQSL+NMRN E DLKQISMAMMFA+MGL+TNY  LGP RP T+
Sbjct: 61  AIIFCAQSLSNMRNFENDLKQISMAMMFAIMGLMTNYLGLGPTRPSTQ 108

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724551|ref|NP_001235270.1| uncharacterized protein LOC100500245 [Glycine max] gi|255629829|gb|ACU15265.1| unknown [Glycine max]

 Score =  167 bits (422), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 73/99 (73%), Positives = 89/99 (89%)

Query: 5   NNSNDPRQPSAAKPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIICCAQS 64
           +N NDPRQPSAA+PYV+  ++P+DLP+DY+GFIAVIFG+AGVMFRYKL SWLA+I CAQS
Sbjct: 3   SNPNDPRQPSAARPYVAPQISPQDLPIDYAGFIAVIFGVAGVMFRYKLSSWLALIFCAQS 62

Query: 65  LANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGTKS 103
           +ANMRN+E DLKQ+ MAMMF+LMGL+TNY GP RPG +S
Sbjct: 63  VANMRNVENDLKQVMMAMMFSLMGLITNYFGPPRPGKQS 101

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388509398|gb|AFK42765.1| unknown [Medicago truncatula]

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 74/103 (71%), Positives = 89/103 (86%), Gaps = 2/103 (1%)

Query: 1   MSSHNNSNDPRQPSAAKPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIIC 60
           MSSH +  DPRQPS+AKPYV   +AP+DLP+DY+GFIAV+FG+AGVMFRYKL SWLA+I 
Sbjct: 1   MSSHGS--DPRQPSSAKPYVPPVIAPQDLPIDYAGFIAVLFGVAGVMFRYKLGSWLALIF 58

Query: 61  CAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGTKS 103
           CAQS+ NMRN+E DLKQ+ MAMMF+LMGL+TNY GP RPG +S
Sbjct: 59  CAQSIVNMRNVENDLKQVMMAMMFSLMGLMTNYFGPPRPGKQS 101

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440836|ref|XP_004138190.1| PREDICTED: protein Asterix-like isoform 1 [Cucumis sativus]

 Score =  159 bits (403), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 81/131 (61%), Positives = 89/131 (67%), Gaps = 32/131 (24%)

Query: 5   NNSNDPRQPSAAKPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFR--------------- 49
             +NDPRQPSA KP+V+ AV P+DLPVDYSGFIAV+FG+AGVMFR               
Sbjct: 3   TQANDPRQPSAVKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRVLFCFFSSTHTLIME 62

Query: 50  -----------------YKLCSWLAIICCAQSLANMRNMETDLKQISMAMMFALMGLVTN 92
                            YKL SWLAII CAQSLANMRN+E DLKQISMAMMFA+MGLVTN
Sbjct: 63  ILLSTHATLLVLVEIGQYKLSSWLAIIFCAQSLANMRNIENDLKQISMAMMFAIMGLVTN 122

Query: 93  YLGPARPGTKS 103
           YL PARPG KS
Sbjct: 123 YLSPARPGAKS 133

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	103
TAIR|locus:2142843	107	AT5G07960 "AT5G07960" [Arabido	0.970	0.934	0.815	3.6e-41
UNIPROTKB|Q2M2T6	106	WDR83OS "Protein Asterix" [Bos	0.951	0.924	0.359	8.2e-12
UNIPROTKB|Q9Y284	106	WDR83OS "Protein Asterix" [Hom	0.951	0.924	0.359	8.2e-12
MGI|MGI:3041257	106	BC056474 "cDNA sequence BC0564	0.951	0.924	0.359	8.2e-12
DICTYBASE|DDB_G0275849	98	DDB_G0275849 "UPF0139 membrane	0.864	0.908	0.296	1e-11
UNIPROTKB|Q6Q7K0	106	WDR83OS "Protein Asterix" [Sus	0.951	0.924	0.349	3.5e-11
UNIPROTKB|F8RT80	101	WDR83OS "Protein Asterix" [Gal	0.873	0.891	0.336	1.5e-10
ZFIN|ZDB-GENE-040426-1674	106	zgc:73111 "zgc:73111" [Danio r	0.912	0.886	0.343	2e-10
FB|FBgn0035592	108	CG10674 [Drosophila melanogast	0.893	0.851	0.31	1.6e-08

TAIR|locus:2142843 AT5G07960 "AT5G07960" [Arabidopsis thaliana (taxid:3702)]

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 84/103 (81%), Positives = 91/103 (88%)

Query:     3 SHNNS---NDPRQPSAAKPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAII 59
             SH N+   NDPRQPSAAKPY+   VAPEDLPVDYSGFIAVI G++GVMFRYK+CSWLAII
Sbjct:     4 SHGNASSVNDPRQPSAAKPYIPRPVAPEDLPVDYSGFIAVILGVSGVMFRYKICSWLAII 63

Query:    60 CCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGTK 102
              CAQSLANMRN+E DLKQISMAMMFA+MGLVTNYLGP RP TK
Sbjct:    64 FCAQSLANMRNLENDLKQISMAMMFAIMGLVTNYLGPNRPATK 106

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

UNIPROTKB|Q2M2T6 WDR83OS "Protein Asterix" [Bos taurus (taxid:9913)]

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 37/103 (35%), Positives = 56/103 (54%)

Query:     3 SHNNSNDPRQPSAA---KPYVSTAVAPEDLPV-DYSGFIAVIFGLAGVMFRYKLCSWLAI 58
             S NN +DPR+P+     KP  S      D P  DY   + +IF + G+M + K C+W+A+
Sbjct:     2 SANNMSDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAWVAV 61

Query:    59 ICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGT 101
              C   S AN R+ E D KQ+  + M ++  +V +YL   +P T
Sbjct:    62 YCSFISFANSRSSE-DTKQMMSSFMLSISAVVMSYLQNPQPMT 103

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9Y284 WDR83OS "Protein Asterix" [Homo sapiens (taxid:9606)]

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 37/103 (35%), Positives = 56/103 (54%)

Query:     3 SHNNSNDPRQPSAA---KPYVSTAVAPEDLPV-DYSGFIAVIFGLAGVMFRYKLCSWLAI 58
             S NN +DPR+P+     KP  S      D P  DY   + +IF + G+M + K C+W+A+
Sbjct:     2 STNNMSDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAWVAV 61

Query:    59 ICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGT 101
              C   S AN R+ E D KQ+  + M ++  +V +YL   +P T
Sbjct:    62 YCSFISFANSRSSE-DTKQMMSSFMLSISAVVMSYLQNPQPMT 103

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:3041257 BC056474 "cDNA sequence BC056474" [Mus musculus (taxid:10090)]

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 37/103 (35%), Positives = 56/103 (54%)

Query:     3 SHNNSNDPRQPSAA---KPYVSTAVAPEDLPV-DYSGFIAVIFGLAGVMFRYKLCSWLAI 58
             S NN +DPR+P+     KP  S      D P  DY   + +IF + G+M + K C+W+A+
Sbjct:     2 STNNMSDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAWVAV 61

Query:    59 ICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGT 101
              C   S AN R+ E D KQ+  + M ++  +V +YL   +P T
Sbjct:    62 YCSFISFANSRSSE-DTKQMMSSFMLSISAVVMSYLQNPQPMT 103

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

DICTYBASE|DDB_G0275849 DDB_G0275849 "UPF0139 membrane protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 27/91 (29%), Positives = 54/91 (59%)

Query:     8 NDPRQPS--AAKPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIICCAQSL 65
             +DPR+ S    +  +  +  P++  ++     ++IFG  G+M +YK+C W++ +CC   L
Sbjct:     2 SDPRKESLIVERFEMRASTEPKEGELELYSLFSIIFGFLGIMLKYKICLWVSAVCCVAYL 61

Query:    66 ANMRNMETDLKQISMAMMFALMGLVTNYLGP 96
             +N+++ ++ ++ I   +  +LMGLV  Y GP
Sbjct:    62 SNLKSKDSSVRTILSPVSLSLMGLVMAYFGP 92

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q6Q7K0 WDR83OS "Protein Asterix" [Sus scrofa (taxid:9823)]

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 36/103 (34%), Positives = 55/103 (53%)

Query:     3 SHNNSNDPRQPSAA---KPYVSTAVAPEDLPV-DYSGFIAVIFGLAGVMFRYKLCSWLAI 58
             S N+ +DPR P+     KP  S      D P  DY   + +IF + G+M + K C+W+A+
Sbjct:     2 SANSMSDPRSPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAWVAV 61

Query:    59 ICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGT 101
              C   S AN R+ E D KQ+  + M ++  +V +YL   +P T
Sbjct:    62 YCSFISFANSRSSE-DTKQMMSSFMLSISAVVMSYLQNPQPMT 103

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F8RT80 WDR83OS "Protein Asterix" [Gallus gallus (taxid:9031)]

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 32/95 (33%), Positives = 52/95 (54%)

Query:     9 DPRQPSAAKPYV--STAVAP--EDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIICCAQS 64
             DPR+P+    Y   +T   P  ED   DY   + ++F + G+M + K C+W+A+ C   S
Sbjct:     3 DPRRPARVTRYKPPTTESNPALEDPTPDYMNLLGMVFSMCGLMLKLKWCAWIAVYCSFIS 62

Query:    65 LANMRNMETDLKQISMAMMFALMGLVTNYLGPARP 99
              AN R+ E D KQ+  + M ++  +V +YL   +P
Sbjct:    63 FANSRSSE-DTKQMMSSFMLSISAVVMSYLQNPQP 96

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-040426-1674 zgc:73111 "zgc:73111" [Danio rerio (taxid:7955)]

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 34/99 (34%), Positives = 53/99 (53%)

Query:     5 NNSNDPRQPSAAKPYV--STAVAP--EDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIIC 60
             NN  DPR+ +    Y   +T   P  ED   DY   + +IF + G+M + K C+W+A+ C
Sbjct:     4 NNMADPRRQNKIFRYKPPNTESNPTLEDPTPDYMNLLGMIFSMCGLMLKLKWCAWIAVYC 63

Query:    61 CAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARP 99
                S AN R+ E D KQ+  + M ++  +V +YL   +P
Sbjct:    64 SFISFANSRSSE-DTKQMMSSFMLSISAVVMSYLQNPQP 101

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

FB|FBgn0035592 CG10674 [Drosophila melanogaster (taxid:7227)]

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 31/100 (31%), Positives = 51/100 (51%)

Query:     5 NNSNDPRQPSAAKPYVS------TAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAI 58
             N + DPR+      Y +      +  A ED+  DY   + +IF + G+M + K C+W A+
Sbjct:     2 NMTVDPRRKEKINRYKAPKNQGQSGGANEDMMPDYMNILGMIFSMCGLMMKLKWCAWFAL 61

Query:    59 ICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYL-GPA 97
              C   S A+ R  + D KQ+  + M ++  +V +YL  PA
Sbjct:    62 YCSCISFASSRASD-DAKQVLSSFMLSVSAVVMSYLQNPA 100


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.132   0.401    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      103       103   0.00091  102 3  11 22  0.37    30
                                                     29  0.49    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  561 (60 KB)
  Total size of DFA:  113 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.96u 0.14s 10.10t   Elapsed:  00:00:01
  Total cpu time:  9.96u 0.14s 10.10t   Elapsed:  00:00:01
  Start:  Mon May 20 15:34:44 2013   End:  Mon May 20 15:34:45 2013

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9VRJ8	ASTER_DROME	No assigned EC number	0.3020	0.8640	0.8240	yes	no
Q2M2T6	ASTER_BOVIN	No assigned EC number	0.3592	0.9514	0.9245	yes	no
Q9SD88	ASTER_ARATH	No assigned EC number	0.8155	0.9708	0.9345	yes	no
F8RT80	ASTER_CHICK	No assigned EC number	0.3263	0.8737	0.8910	yes	no
Q6Q7K0	ASTER_PIG	No assigned EC number	0.3495	0.9514	0.9245	yes	no
Q9Y284	ASTER_HUMAN	No assigned EC number	0.3592	0.9514	0.9245	yes	no
Q6ZWX0	ASTER_MOUSE	No assigned EC number	0.3592	0.9514	0.9245	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	103
pfam03669	103	pfam03669, UPF0139, Uncharacterized protein family	7e-42

>gnl|CDD|190709 pfam03669, UPF0139, Uncharacterized protein family (UPF0139)

 Score =  132 bits (334), Expect = 7e-42
 Identities = 49/103 (47%), Positives = 61/103 (59%), Gaps = 5/103 (4%)

Query: 5   NNSNDPRQPSAAKPY----VSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIIC 60
              +DPR+PS AK Y    +S     EDLP DY  F+ +IF + G+M R K CSWLAIIC
Sbjct: 2   AGVSDPRRPSKAKRYKPPKLSPNQPLEDLPPDYMNFLGMIFSMCGLMMRLKWCSWLAIIC 61

Query: 61  CAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGTKS 103
            A S ANMRN   DLKQIS + M ++  +V +YL    P T  
Sbjct: 62  SAISFANMRN-SNDLKQISSSFMLSVSAVVMSYLQNPSPMTPP 103

Length = 103

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	103
PF03669	103	UPF0139: Uncharacterised protein family (UPF0139);	100.0
KOG3462	105	consensus Predicted membrane protein [Function unk	100.0

>PF03669 UPF0139: Uncharacterised protein family (UPF0139); InterPro: IPR005351 This is a small family of proteins of unknown function which appear to be related to the hypothetical protein CG10674 from Drosophila melanogaster (Fruit fly)(Q9VRJ8 from SWISSPROT)

Probab=100.00  E-value=1e-44  Score=248.34  Aligned_cols=97  Identities=45%  Similarity=0.837  Sum_probs=92.2

Q ss_pred             CCCCCCCCCCccccccCCCCC----CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcchhhHHHH
Q 034141            6 NSNDPRQPSAAKPYVSTAVAP----EDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIICCAQSLANMRNMETDLKQISMA   81 (103)
Q Consensus         6 ~~~DpRRpdlivpy~~p~~~~----~d~~~D~~s~l~~~l~m~am~mRnK~~aW~al~~s~~s~~N~k~~e~d~kq~~~~   81 (103)
                      +++||||||+|+||++|+.++    ||+++||+++||++|+|+|+|||+|||+|+|++||++||+|+|+ |+|.||++++
T Consensus         3 ~~~DPRRp~~i~~y~~p~~~~~~~~ed~~~Dy~~~L~~~~~m~gl~mr~K~~aW~al~~s~~S~an~k~-~~d~kq~~ss   81 (103)
T PF03669_consen    3 SSSDPRRPDLIVPYKPPPASPNQPQEDPPPDYMSFLGMIFSMAGLMMRNKWCAWAALFFSCQSFANMKS-SNDTKQISSS   81 (103)
T ss_pred             CCCCCCCccccccCCCCCCcccccccccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-cccchHHHHH
Confidence            558999999999999999766    78899999999999999999999999999999999999999999 7799999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCC
Q 034141           82 MMFALMGLVTNYLGPARPGTKS  103 (103)
Q Consensus        82 v~~sv~alv~~Yl~~~~p~~~~  103 (103)
                      |+|||+|||++|||+|+|+++.
T Consensus        82 ~m~sv~alvm~Yl~~~~p~~~~  103 (103)
T PF03669_consen   82 FMFSVMALVMSYLQPPSPMTPP  103 (103)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCc
Confidence            9999999999999999999864

>KOG3462 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=2.1e-42  Score=233.73  Aligned_cols=97  Identities=47%  Similarity=0.837  Sum_probs=92.9

Q ss_pred             CCCCCCCCCCccccccCCCCC-----CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcchhhHHH
Q 034141            6 NSNDPRQPSAAKPYVSTAVAP-----EDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIICCAQSLANMRNMETDLKQISM   80 (103)
Q Consensus         6 ~~~DpRRpdlivpy~~p~~~~-----~d~~~D~~s~l~~~l~m~am~mRnK~~aW~al~~s~~s~~N~k~~e~d~kq~~~   80 (103)
                      +.+|||||+.++||++|+..+     ||+.+||+++||++|+|+|+|+|.|||+|+|++||++||+|+|+.| |.||+.+
T Consensus         3 ~~~DPRrp~~i~rYkp~p~~~~~~~~eD~~pdYmn~lgmIfsmcGlM~r~KwCsWlAl~cs~iSfAn~R~se-D~KQi~s   81 (105)
T KOG3462|consen    3 SVNDPRRPNKIKRYKPPPSAPQGAANEDPPPDYMNFLGMIFSMCGLMFRLKWCSWLALYCSCISFANSRNSE-DAKQISS   81 (105)
T ss_pred             CCCCCCCcccccCCCCCCCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH-HHHHHHH
Confidence            458999999999999998776     8999999999999999999999999999999999999999999988 9999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCC
Q 034141           81 AMMFALMGLVTNYLGPARPGTKS  103 (103)
Q Consensus        81 ~v~~sv~alv~~Yl~~~~p~~~~  103 (103)
                      ++|+|++||||+|||||+|.|+.
T Consensus        82 sfMlsisavVmsYLqnp~p~tpp  104 (105)
T KOG3462|consen   82 SFMLSISAVVMSYLQNPRPMTPP  104 (105)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCC
Confidence            99999999999999999999874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00