Citrus Sinensis ID: 034277

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------10
Protein Sequence
MASSCHRFIRRSSLSSIKSAFRSNAPKSPTAASAPFPLPTKSSPSPLRRFSLSRSPSELGCAQSLLPLHSVVAAARMTSCLSAASKSCRALSQDGIDGT
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHccHHHHHHHHHHHHHHcccccHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHcHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccc
Coil and Loop (DISEMBL)
masschrfirrssLSSIKSAFrsnapksptaasapfplptksspsplrrfslsrspselgcaqsllpLHSVVAAARMTSCLSAASKSCRAlsqdgidgt
Flexible Loop (DISEMBL)
masschrfirrsslssiKSAFRSNAPksptaasapfplptksspsPLRRFSLSRSPSELGCAQSLLPLHSVVAAARMTSCLSAASKScralsqdgidgt
Low Complexity Region (SEG)
MASSCHRFIRRSSLSSIKSAFRSNAPKSPTAASAPFPLPTKsspsplrrfslsrspselGCAQSLLPLHSVVAAARMTSCLSAASKSCRALSQDGIDGT
Disordered region (IsUnstruct)
************************************************************CAQSLLPLHSVVAAARMTSCL******************
Disordered Region (DISOPRED)
******************************************************SPSELGCAQSLLPLHSVVAAARMTSCLSAASKSCRALSQDGIDG*
Disordered Region (DISEMBL)
**********RSSLSSIKSA*************APFPLPTKSSPSPLRRFSLSRSPSELGCAQSLLPLHSVVAAARMTSCL******************
Disordered Region (DISPRO)
*************************************************FSLSRSPSELGCAQSLLPLHSVVAAARMTSC*******************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASSCHRFIRRSSLSSIKSAFRSNAPKSPTAASAPFPLPTKSSPSPLRRFSLSRSPSELGCAQSLLPLHSVVAAARMTSCLSAASKSCRALSQDGIDGT
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	99
359496852	106	PREDICTED: uncharacterized protein LOC10	0.949	0.886	0.646	2e-25
359496854	100	PREDICTED: uncharacterized protein LOC10	0.949	0.94	0.646	3e-25
296090673	108	unnamed protein product [Vitis vinifera]	0.969	0.888	0.633	4e-25
359495978	108	PREDICTED: uncharacterized protein LOC10	0.969	0.888	0.623	3e-24
89257519	108	hypothetical protein 26.t00030 [Brassica	0.949	0.870	0.572	4e-19
79325137	97	uncharacterized protein [Arabidopsis tha	0.909	0.927	0.585	5e-19
297800380	99	hypothetical protein ARALYDRAFT_493145 [	0.929	0.929	0.583	6e-19
15236039	99	uncharacterized protein [Arabidopsis tha	0.929	0.929	0.572	9e-19
21555575	104	unknown [Arabidopsis thaliana]	0.838	0.798	0.651	2e-18
89257489	109	hypothetical protein 25.t00029 [Brassica	0.949	0.862	0.596	2e-18

>gi|359496852|ref|XP_003635355.1| PREDICTED: uncharacterized protein LOC100854766 isoform 1 [Vitis vinifera]

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/99 (64%), Positives = 80/99 (80%), Gaps = 5/99 (5%)

Query: 1  MASSCHRFIRRSSLSSIKSAFRSNA-----PKSPTAASAPFPLPTKSSPSPLRRFSLSRS 55
          MASSC+RF+ R+SLS++KSA R+N       +S T  S+PFPLP++S+ SPLRRFS SR+
Sbjct: 1  MASSCNRFVSRASLSAVKSAIRANGRTASVNRSATPTSSPFPLPSRSTVSPLRRFSSSRT 60

Query: 56 PSELGCAQSLLPLHSVVAAARMTSCLSAASKSCRALSQD 94
            ELGC QSLLPLHS VAAARMTSCLS+ S+SC+ALSQ+
Sbjct: 61 RGELGCIQSLLPLHSAVAAARMTSCLSSTSRSCKALSQE 99

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496854|ref|XP_003635356.1| PREDICTED: uncharacterized protein LOC100854766 isoform 2 [Vitis vinifera]

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/99 (64%), Positives = 79/99 (79%), Gaps = 5/99 (5%)

Query: 1  MASSCHRFIRRSSLSSIKSAFRSNA-----PKSPTAASAPFPLPTKSSPSPLRRFSLSRS 55
          MASSC+RF+ R+SLS++KSA R+N       +S T  S+PFPLP++S+ SPLRRFS SR+
Sbjct: 1  MASSCNRFVSRASLSAVKSAIRANGRTASVNRSATPTSSPFPLPSRSTVSPLRRFSSSRT 60

Query: 56 PSELGCAQSLLPLHSVVAAARMTSCLSAASKSCRALSQD 94
            ELGC QSLLPLHS VAAARMTSCLS+ S+SC+ALSQ 
Sbjct: 61 RGELGCIQSLLPLHSAVAAARMTSCLSSTSRSCKALSQG 99

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296090673|emb|CBI41073.3| unnamed protein product [Vitis vinifera]

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 64/101 (63%), Positives = 80/101 (79%), Gaps = 5/101 (4%)

Query: 1   MASSCHRFIRRSSLSSIKSAFRSNA-----PKSPTAASAPFPLPTKSSPSPLRRFSLSRS 55
           MASSC+RF+ R+SLS++KSA R+N       +S T  S+PFPLP++S+ SPLRRFS SR+
Sbjct: 1   MASSCNRFVSRASLSAVKSAIRANGRTASVNRSATPTSSPFPLPSRSTVSPLRRFSSSRT 60

Query: 56  PSELGCAQSLLPLHSVVAAARMTSCLSAASKSCRALSQDGI 96
             ELGC QSLLPLHS VAAARMTSCLS+ S+SC+ALSQ  +
Sbjct: 61  RGELGCIQSLLPLHSAVAAARMTSCLSSTSRSCKALSQGTL 101

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495978|ref|XP_003635125.1| PREDICTED: uncharacterized protein LOC100248900 isoform 2 [Vitis vinifera] gi|359495980|ref|XP_002272938.2| PREDICTED: uncharacterized protein LOC100248900 isoform 1 [Vitis vinifera] gi|297744382|emb|CBI37356.3| unnamed protein product [Vitis vinifera]

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/101 (62%), Positives = 79/101 (78%), Gaps = 5/101 (4%)

Query: 1   MASSCHRFIRRSSLSSIKSAFRSNA-----PKSPTAASAPFPLPTKSSPSPLRRFSLSRS 55
           MASSC+RF+ R+SLS++KSA R+N       +S T  S+PFPLP++S+ SPLRRFS SR+
Sbjct: 1   MASSCNRFVSRASLSAVKSAIRANGRTASVNRSATPTSSPFPLPSRSTVSPLRRFSSSRT 60

Query: 56  PSELGCAQSLLPLHSVVAAARMTSCLSAASKSCRALSQDGI 96
              LGC QSLLPLHS VAAARMTSCLS+ S+SC+ALSQ  +
Sbjct: 61  RGVLGCIQSLLPLHSAVAAARMTSCLSSTSRSCKALSQGTL 101

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|89257519|gb|ABD65009.1| hypothetical protein 26.t00030 [Brassica oleracea]

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/103 (57%), Positives = 74/103 (71%), Gaps = 9/103 (8%)

Query: 1   MASSCHRFIRRSSLSSIKSAFRSNAPKSPTAASAP-------FPLPTKSSPSPLRRFSLS 53
           MAS+C+RF+ RSS+SS++SA RS+  KSP    +        F +P+K + SP  RFS S
Sbjct: 1   MASACNRFMNRSSVSSLRSAIRSSLHKSPIGTGSSPSASSAGFRIPSKPAASP--RFSFS 58

Query: 54  RSPSELGCAQSLLPLHSVVAAARMTSCLSAASKSCRALSQDGI 96
           R PSELGCAQSLLPLHS VAAAR+TSCLS  S++ RALSQ  +
Sbjct: 59  RCPSELGCAQSLLPLHSTVAAARLTSCLSVTSRNSRALSQGTL 101

Source: Brassica oleracea

Species: Brassica oleracea

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79325137|ref|NP_001031653.1| uncharacterized protein [Arabidopsis thaliana] gi|332658476|gb|AEE83876.1| uncharacterized protein [Arabidopsis thaliana]

 Score = 98.6 bits (244), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 55/94 (58%), Positives = 67/94 (71%), Gaps = 4/94 (4%)

Query: 1  MASSCHRFIRRSSLSSIKSAFRSNAPKSPTAASAPFPLPTKSSPSPLRRFSLSRSPSELG 60
          MAS+C +   R+S+SS+KS  RS    +  A+SA F LP++    P R FS SR PSELG
Sbjct: 1  MASACRKLFNRASVSSLKSTLRSTTGSTSAASSAGFRLPSQ----PTRHFSFSRCPSELG 56

Query: 61 CAQSLLPLHSVVAAARMTSCLSAASKSCRALSQD 94
          C QSLLPLHS VAAAR+TSCLS  S+S RALSQ+
Sbjct: 57 CVQSLLPLHSTVAAARLTSCLSTTSRSSRALSQE 90

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297800380|ref|XP_002868074.1| hypothetical protein ARALYDRAFT_493145 [Arabidopsis lyrata subsp. lyrata] gi|297313910|gb|EFH44333.1| hypothetical protein ARALYDRAFT_493145 [Arabidopsis lyrata subsp. lyrata]

 Score = 98.2 bits (243), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 56/96 (58%), Positives = 69/96 (71%), Gaps = 4/96 (4%)

Query: 1  MASSCHRFIRRSSLSSIKSAFRSNAPKSPTAASAPFPLPTKSSPSPLRRFSLSRSPSELG 60
          MAS+C +   R+S+SS+KS+ RS    +P A+SA F LP++    P R FS SR PSELG
Sbjct: 1  MASACRKLFNRASVSSLKSSLRSTTGSAPAASSARFRLPSQ----PSRHFSFSRCPSELG 56

Query: 61 CAQSLLPLHSVVAAARMTSCLSAASKSCRALSQDGI 96
          C QSLLPLHS VAAAR+TSCLS  S+S RALSQ  +
Sbjct: 57 CVQSLLPLHSTVAAARLTSCLSTTSRSSRALSQGTL 92

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15236039|ref|NP_193463.1| uncharacterized protein [Arabidopsis thaliana] gi|15292857|gb|AAK92799.1| unknown protein [Arabidopsis thaliana] gi|37202058|gb|AAQ89644.1| At4g17310 [Arabidopsis thaliana] gi|51969176|dbj|BAD43280.1| hypothetical protein [Arabidopsis thaliana] gi|332658475|gb|AEE83875.1| uncharacterized protein [Arabidopsis thaliana]

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 55/96 (57%), Positives = 67/96 (69%), Gaps = 4/96 (4%)

Query: 1  MASSCHRFIRRSSLSSIKSAFRSNAPKSPTAASAPFPLPTKSSPSPLRRFSLSRSPSELG 60
          MAS+C +   R+S+SS+KS  RS    +  A+SA F LP++    P R FS SR PSELG
Sbjct: 1  MASACRKLFNRASVSSLKSTLRSTTGSTSAASSAGFRLPSQ----PTRHFSFSRCPSELG 56

Query: 61 CAQSLLPLHSVVAAARMTSCLSAASKSCRALSQDGI 96
          C QSLLPLHS VAAAR+TSCLS  S+S RALSQ  +
Sbjct: 57 CVQSLLPLHSTVAAARLTSCLSTTSRSSRALSQGTL 92

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21555575|gb|AAM63889.1| unknown [Arabidopsis thaliana]

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/89 (65%), Positives = 68/89 (76%), Gaps = 6/89 (6%)

Query: 16  SIKSAFRSNAP----KSPTAAS-APFPLPTKSSPSPLRRFSLSRSPSELGCAQSLLPLHS 70
           +I+S+FR N+P     SP AAS A F +P+K + SPL RFS SR PSELGC QSLLPLHS
Sbjct: 17  AIRSSFR-NSPIGTGSSPAAASFAGFRIPSKPAASPLPRFSFSRCPSELGCVQSLLPLHS 75

Query: 71  VVAAARMTSCLSAASKSCRALSQDGIDGT 99
            VAAAR+TSCLS  S+S RAL+QDGID T
Sbjct: 76  TVAAARLTSCLSTTSRSSRALTQDGIDDT 104

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|89257489|gb|ABD64980.1| hypothetical protein 25.t00029 [Brassica oleracea]

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/104 (59%), Positives = 76/104 (73%), Gaps = 10/104 (9%)

Query: 1   MASSC-HRFIRRSSLSSIKSAFRSNAPKSP-------TAASAPFPLPTKSSPSPLRRFSL 52
           MAS+C +RF+ RSS+SS++SA RS   KSP       +A+SA F +P+K + SP  RFS 
Sbjct: 1   MASACCNRFMNRSSVSSLRSAIRSALHKSPVGTGTPPSASSAGFRIPSKPAASP--RFSF 58

Query: 53  SRSPSELGCAQSLLPLHSVVAAARMTSCLSAASKSCRALSQDGI 96
           SR PSELGC QSLLPLHS VAAAR+TSCLS  S+S RALSQ  +
Sbjct: 59  SRCPSELGCVQSLLPLHSTVAAARLTSCLSVTSRSSRALSQGTL 102

Source: Brassica oleracea

Species: Brassica oleracea

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	99
TAIR|locus:505006678	116	AT5G47455 "AT5G47455" [Arabido	0.898	0.767	0.525	2.3e-16
TAIR|locus:2130819	99	AT4G17310 [Arabidopsis thalian	0.898	0.898	0.483	9.8e-16
TAIR|locus:2181925	93	NOXY2 "AT5G11630" [Arabidopsis	0.828	0.881	0.361	5.5e-06
TAIR|locus:2136363	96	AT4G39300 "AT4G39300" [Arabido	0.888	0.916	0.3	0.00027
TAIR|locus:505006558	94	AT4G34265 "AT4G34265" [Arabido	0.393	0.414	0.475	0.00035

TAIR|locus:505006678 AT5G47455 "AT5G47455" [Arabidopsis thaliana (taxid:3702)]

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 51/97 (52%), Positives = 59/97 (60%)

Query:     7 RFIRRSSLSSIKSAFRS---NAP----KSPTAAS-APFPLPTKXXXXXXXXXXXXXXXXX 58
             RF+ RSS+SS KSA RS   N+P     SP AAS A F +P+K                 
Sbjct:     4 RFMSRSSVSSFKSAIRSSFRNSPIGTGSSPAAASSAGFRIPSKPAASPLPRFSFSRCPSE 63

Query:    59 XGCAQSLLPLHSVVAAARMTSCLSAASKSCRALSQDG 95
              GC QSLLPLHS VAAAR+TSCLS  S+S RAL+QDG
Sbjct:    64 LGCVQSLLPLHSTVAAARLTSCLSTTSRSSRALTQDG 100

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2130819 AT4G17310 [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 45/93 (48%), Positives = 56/93 (60%)

Query:     1 MASSCHRFIRRSSLSSIKSAFRSNAPKSPTAASAPFPLPTKXXXXXXXXXXXXXXXXXXG 60
             MAS+C +   R+S+SS+KS  RS    +  A+SA F LP++                  G
Sbjct:     1 MASACRKLFNRASVSSLKSTLRSTTGSTSAASSAGFRLPSQPTRHFSFSRCPSEL----G 56

Query:    61 CAQSLLPLHSVVAAARMTSCLSAASKSCRALSQ 93
             C QSLLPLHS VAAAR+TSCLS  S+S RALSQ
Sbjct:    57 CVQSLLPLHSTVAAARLTSCLSTTSRSSRALSQ 89

GO:0005739 "mitochondrion" evidence=ISM

TAIR|locus:2181925 NOXY2 "AT5G11630" [Arabidopsis thaliana (taxid:3702)]

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 34/94 (36%), Positives = 49/94 (52%)

Query:     1 MASSCHRFIRRSSLSSIKSAFRSNAPK-SPTAASAPFPLPTKXXXXXXXXXXXXXXXXXX 59
             MAS C R + + + S+ +SA   N P   P +AS+   +P                    
Sbjct:     1 MASRC-RSLSKPAFSAFRSAM--NKPSIRPKSASSFIGVPPSPGFSRPIGQL-------- 49

Query:    60 GCAQSLLPLHSVVAAARMTSCLSAASKSCRALSQ 93
             G  QSLLPL+S VA+AR+TSCL   S++ R+L+Q
Sbjct:    50 GSLQSLLPLYSAVASARLTSCLGIDSQNSRSLAQ 83

GO:0003674 "molecular_function" evidence=ND

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0005739 "mitochondrion" evidence=IDA

GO:0048364 "root development" evidence=IMP

GO:0050832 "defense response to fungus" evidence=IMP

GO:0071433 "cell wall repair" evidence=IMP

TAIR|locus:2136363 AT4G39300 "AT4G39300" [Arabidopsis thaliana (taxid:3702)]

 Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
 Identities = 30/100 (30%), Positives = 44/100 (44%)

Query:     1 MASSCHRFIRRSSLSSIKSAFRSNAPKS----PTAASAPFPLPTKXXXXXXXXXXXXXXX 56
             MAS C   +   S + + S  R+   KS    PT  S+PF                    
Sbjct:     1 MASFCRSALMAGSRNLV-SRSRTVTQKSLNLKPTTTSSPF------ASMSQSIPRASRVL 53

Query:    57 XXXGCAQSLLPLHSVVAAARMTSCLSAASKSCRALSQDGI 96
                G  ++++PLHS VA+AR+ S + AA  SC +L   G+
Sbjct:    54 SALGSVETMIPLHSAVASARLRSSI-AADSSCWSLLSQGL 92

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006558 AT4G34265 "AT4G34265" [Arabidopsis thaliana (taxid:3702)]

 Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
 Identities = 19/40 (47%), Positives = 28/40 (70%)

Query:    60 GCAQSLLPLHSVVAAARMTSCLSAASKS-CRALSQDGIDG 98
             GC +S LPL++VVAAAR+TS L+   ++ C   + +G DG
Sbjct:    55 GCTESFLPLYNVVAAARLTSHLNVNLRAFCELSNGNGKDG 94


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.122   0.353    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       99        81   0.00091  102 3  10 22  0.38    29
                                                     29  0.42    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  506 (54 KB)
  Total size of DFA:  107 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.41u 0.16s 11.57t   Elapsed:  00:00:00
  Total cpu time:  11.41u 0.16s 11.57t   Elapsed:  00:00:00
  Start:  Mon May 20 16:00:19 2013   End:  Mon May 20 16:00:19 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh2_kg.7__2578__AT4G17310.1 annotation not avaliable (99 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00