Citrus Sinensis ID: 034283

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------10
Protein Sequence
MSRGGSYGGGQSSLGYLFGSEEKPAAPPAPQTVSLPPYGIDTTTEKPQDNQAPNKPNVSNNYHRAQGQNTGNFITDRPSTKVKSVPGGDSSLGYLFGDK
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccEEEccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccEEEccccccccHHHccccc
Coil and Loop (DISEMBL)
msrggsygggqsslgylfgseekpaappapqtvslppygidtttekpqdnqapnkpnvsnnyhraqgqntgnfitdrpstkvksvpggdsslgylfgdk
Flexible Loop (DISEMBL)
msrggsygggQSSLGYLFGSEEKPAAPPAPQTVSLPPYGIDTTtekpqdnqapnkpnvsnnyhRAQGqntgnfitdrpstkvksvpggdsslgylfgdk
Low Complexity Region (SEG)
MsrggsygggqsslgylfgsEEKPAAPPAPQTVSLPPYGIDTTTEKPQDNQAPNKPNVSNNYHRAQGQNTGNFITDRPSTKVKSVPGGDSSLGYLFGDK
Disordered region (IsUnstruct)
***************************************************************************************************
Disordered Region (DISOPRED)
*******GGGQSSLGYLFGSE********************************************QGQNTGNFITDRPSTKVKSVPGGDSSLGYLFGD*
Disordered Region (DISEMBL)
*********GQSSLGYLFGSEEKPAAPPAPQTVSLPPYGIDTTTEKPQDNQAPNKPNVSNNYHRAQGQNTGNFITDRPSTKVKSVPGGDSSLGYLFGDK
Disordered Region (DISPRO)
***********************************************************NNYHRAQGQNTGNFITDRPSTKVKSVPGGDSS********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSRGGSYGGGQSSLGYLFGSEEKPAAPPAPQTVSLPPYGIDTTTEKPQDNQAPNKPNVSNNYHRAQGQNTGNFITDRPSTKVKSVPGGDSSLGYLFGDK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	99	2.2.26 [Sep-21-2011]
Q9LE54	110	Protein SPIRAL1-like 2 OS	yes	no	0.939	0.845	0.527	7e-20
B3H4F1	113	Protein SPIRAL1-like 1 OS	no	no	0.969	0.849	0.568	3e-18
Q8LGD1	99	Protein SPIRAL1-like 5 OS	no	no	0.818	0.818	0.597	5e-18
Q9SJW3	119	Protein SPIRAL1 OS=Arabid	no	no	0.969	0.806	0.452	3e-13
Q9LF22	127	Protein SPIRAL1-like 4 OS	no	no	0.969	0.755	0.439	3e-13
Q2QQ99	101	Protein SPIRAL1-like 3 OS	yes	no	0.797	0.782	0.493	5e-13
Q2R0W8	115	Protein SPIRAL1-like 2 OS	no	no	0.555	0.478	0.636	2e-12
Q7Y1L9	116	Protein SPIRAL1-like 1 OS	no	no	0.585	0.5	0.606	2e-12
Q9S7P8	122	Protein SPIRAL1-like 3 OS	no	no	0.383	0.311	0.736	9e-10
Q7XQ83	127	Protein SPIRAL1-like 4 OS	no	no	0.868	0.677	0.376	8e-07

>sp|Q9LE54|SP1L2_ARATH Protein SPIRAL1-like 2 OS=Arabidopsis thaliana GN=SP1L2 PE=2 SV=1

 Score = 95.9 bits (237), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 58/110 (52%), Positives = 66/110 (60%), Gaps = 17/110 (15%)

Query: 1   MSRGGSYGGGQSSLGYLFGSEEKP-------------AAPPAPQTVSLPPYGIDTTTEKP 47
           M RG S GGGQSSLGYLFGS E P             ++  AP T +     +D+  + P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 48  QDNQAPNKPNVSNNYHRAQGQNTGNFITDRPSTKVKSVPGGDSSLGYLFG 97
               A    N +NNY RA+GQNTGNFITDRPSTKV S PGG SSL YLFG
Sbjct: 61  ----AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFG 106

Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth.
Arabidopsis thaliana (taxid: 3702)

>sp|B3H4F1|SP1L1_ARATH Protein SPIRAL1-like 1 OS=Arabidopsis thaliana GN=SP1L1 PE=2 SV=1

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/109 (56%), Positives = 67/109 (61%), Gaps = 13/109 (11%)

Query: 1   MSRGGSYGGGQSSLGYLFGSEE--KPAA--PPAPQTVSLP------PYGIDTTTEKPQDN 50
           M RG S GGGQSSLGYLFGS E  KPA    PAP + +LP      P  +   T      
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAPKPAINNAPAPSSETLPISADPSPKHVAAQTVN-VTK 59

Query: 51  QAPNKPNVS--NNYHRAQGQNTGNFITDRPSTKVKSVPGGDSSLGYLFG 97
           Q P   N S  NNY RA GQNTGNF+TDRPSTKV + PGG SSL YLFG
Sbjct: 60  QIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFG 108

Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LGD1|SP1L5_ARATH Protein SPIRAL1-like 5 OS=Arabidopsis thaliana GN=SP1L5 PE=2 SV=1

 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 52/87 (59%), Positives = 62/87 (71%), Gaps = 6/87 (6%)

Query: 16 YLFGSEEK--PAAPPAPQTVSLPPYGIDTTTEKPQDNQAPNKPNVSNN-YHRAQGQNTGN 72
          YLFGS+ +      P       PPYG+D+T E   D++A  KP +SNN Y R QGQN+GN
Sbjct: 16 YLFGSDNEIPKTPAPPVAPKPAPPYGVDSTEE---DHEADQKPKISNNNYQRVQGQNSGN 72

Query: 73 FITDRPSTKVKSVPGGDSSLGYLFGDK 99
          F+TDRP+TKVKSVPGG SSLGYLFGDK
Sbjct: 73 FVTDRPTTKVKSVPGGGSSLGYLFGDK 99

Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJW3|SPR1_ARATH Protein SPIRAL1 OS=Arabidopsis thaliana GN=SPR1 PE=2 SV=1

 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 59/115 (51%), Gaps = 19/115 (16%)

Query: 1   MSRGGSYGGGQSSLGYLFGSEEKPA-----------------APPAPQTVSLPPYGIDTT 43
           M RG S GGGQSSL YLFG +                     APP     +       T+
Sbjct: 1   MGRGNSCGGGQSSLDYLFGGDAPAPKPVPAPRPAPTESNNGPAPPVTAVTATALTTATTS 60

Query: 44  TEKPQDN-QAPNKPNV-SNNYHRAQGQNTGNFITDRPSTKVKSVPGGDSSLGYLF 96
            E  + N Q P       NNY RA+GQNTGNF+TDRPSTKV + PGG SSL YLF
Sbjct: 61  VEPAELNKQIPAGIKTPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLF 115

Required for directional control of cell elongation. Stabilizes growing ends of cortical microtubules and influences their dynamic properties. Acts redundantly with SP1Ls in maintaining the cortical microtubules organization essential for anisotropic cell growth. Plays a key role in salt stress-induced microtubules disassembly.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LF22|SP1L4_ARATH Protein SPIRAL1-like 4 OS=Arabidopsis thaliana GN=SP1L4 PE=2 SV=1

 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/116 (43%), Positives = 62/116 (53%), Gaps = 20/116 (17%)

Query: 2   SRGGSYGGGQSSLGYLFGSEEKPAAPPAPQTVS-----------------LPPYGIDTTT 44
           +RG + GGG+SSLGYLFGS E    P  P   +                  P     TTT
Sbjct: 4   ARGVNSGGGESSLGYLFGSGESVPKPNKPNAKTGFTTTTTTTTTTDGAGGRPKTTTTTTT 63

Query: 45  EKPQDNQAPNKPNVS---NNYHRAQGQNTGNFITDRPSTKVKSVPGGDSSLGYLFG 97
              ++    N   V    NNY+R+ GQN GNF+T+RPSTKV + PGG SSLGYLFG
Sbjct: 64  TGDKNKTEENSAGVRGSPNNYYRSDGQNCGNFLTERPSTKVHAAPGGGSSLGYLFG 119

Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Arabidopsis thaliana (taxid: 3702)

>sp|Q2QQ99|SP1L3_ORYSJ Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica GN=Os12g0502000 PE=2 SV=1

 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 2/81 (2%)

Query: 16 YLFGSEEKPAAPPAPQTVSLPPYGIDTTTEKPQDNQAPNKPNVSNNYHRAQGQNTGNFIT 75
          YLFG  E P +   P  V  P     ++ EK ++  A  + + +NNY RA+GQN GNF+T
Sbjct: 16 YLFGGGEAPKSAEKPAPVQKP--APSSSAEKLKEIPAGIQSSKANNYMRAEGQNCGNFLT 73

Query: 76 DRPSTKVKSVPGGDSSLGYLF 96
          DRPSTKV++ PGG SSL YLF
Sbjct: 74 DRPSTKVQAAPGGGSSLDYLF 94

Acts in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q2R0W8|SP1L2_ORYSJ Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica GN=Os11g0629400 PE=2 SV=1

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/55 (63%), Positives = 41/55 (74%)

Query: 45  EKPQDNQAPNKPNVSNNYHRAQGQNTGNFITDRPSTKVKSVPGGDSSLGYLFGDK 99
           EK ++  A  +   +NNY RAQGQN GNF+TDRPSTKV + PGG SSLGYLFG K
Sbjct: 61  EKMKEIPAGIQSTQANNYFRAQGQNCGNFLTDRPSTKVHAAPGGGSSLGYLFGGK 115

Acts in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7Y1L9|SP1L1_ORYSJ Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica GN=Os03g0417800 PE=2 SV=1

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/61 (60%), Positives = 41/61 (67%), Gaps = 3/61 (4%)

Query: 37  PYGIDTTTEKPQDNQAPNKPNVSNNYHRAQGQNTGNFITDRPSTKVKSVPGGDSSLGYLF 96
           P   D T + P   Q       +NNYHRA GQNTGNF+TDRPSTKV + PGG SSLGYLF
Sbjct: 57  PAKADATKQIPAGIQGSRS---NNNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSLGYLF 113

Query: 97  G 97
           G
Sbjct: 114 G 114

Acts in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9S7P8|SP1L3_ARATH Protein SPIRAL1-like 3 OS=Arabidopsis thaliana GN=SP1L3 PE=2 SV=1

 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 28/38 (73%), Positives = 32/38 (84%)

Query: 60  NNYHRAQGQNTGNFITDRPSTKVKSVPGGDSSLGYLFG 97
           NNY R++GQN GNF+TDRPSTKV + PGG SSL YLFG
Sbjct: 75  NNYFRSEGQNCGNFLTDRPSTKVHAAPGGGSSLDYLFG 112

Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Arabidopsis thaliana (taxid: 3702)

>sp|Q7XQ83|SP1L4_ORYSJ Protein SPIRAL1-like 4 OS=Oryza sativa subsp. japonica GN=Os04g0578300 PE=3 SV=1

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 23/109 (21%)

Query: 14  LGYLFGSEEKPAAP----PAPQTVSLPPYG------IDTTTEKPQDNQAP---------- 53
           LGYLF  E +   P     + Q  +  P G         + E  Q++QA           
Sbjct: 17  LGYLFEPEPEDIIPDHSTKSVQGTNKAPKGNIVLGDKMASDEADQEHQAAAPLKKEDSNP 76

Query: 54  --NKPNVSNNYHRAQ-GQNTGNFITDRPSTKVKSVPGGDSSLGYLFGDK 99
             +  + SN YH  Q G N+G  ITDRPST+V+  PGG SSLG+LFGD+
Sbjct: 77  IVSSRSASNIYHTNQVGNNSGLLITDRPSTRVRCAPGGPSSLGFLFGDE 125

Acts in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	99
224058443	99	predicted protein [Populus trichocarpa]	0.848	0.848	0.773	1e-29
118482887	99	unknown [Populus trichocarpa]	0.848	0.848	0.761	4e-29
224071978	99	predicted protein [Populus trichocarpa]	0.848	0.848	0.761	2e-28
255537565	100	SP1L, putative [Ricinus communis] gi|223	0.848	0.84	0.752	4e-27
225426170	100	PREDICTED: uncharacterized protein LOC10	0.848	0.84	0.682	3e-23
21592628	110	putative nitrilase-associated protein [A	0.939	0.845	0.536	4e-19
297841653	110	hypothetical protein ARALYDRAFT_476049 [	0.939	0.845	0.536	5e-19
351726476	99	uncharacterized protein LOC100526947 [Gl	0.848	0.848	0.595	1e-18
224141087	107	predicted protein [Populus trichocarpa]	0.979	0.906	0.553	2e-18
449457568	104	PREDICTED: protein SPIRAL1-like 5-like [	0.838	0.798	0.588	2e-18

>gi|224058443|ref|XP_002299512.1| predicted protein [Populus trichocarpa] gi|222846770|gb|EEE84317.1| predicted protein [Populus trichocarpa]

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/84 (77%), Positives = 73/84 (86%)

Query: 16 YLFGSEEKPAAPPAPQTVSLPPYGIDTTTEKPQDNQAPNKPNVSNNYHRAQGQNTGNFIT 75
          YLFGS+E+P+APP  + V+LPPYG+D T EKP D+ +  K  VSNNYHRAQGQNTGNFIT
Sbjct: 16 YLFGSDEQPSAPPPLRPVNLPPYGVDITVEKPPDSGSAEKKQVSNNYHRAQGQNTGNFIT 75

Query: 76 DRPSTKVKSVPGGDSSLGYLFGDK 99
          DRPSTKVKSVPGGDSSLGYLFGDK
Sbjct: 76 DRPSTKVKSVPGGDSSLGYLFGDK 99

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118482887|gb|ABK93358.1| unknown [Populus trichocarpa]

 Score =  132 bits (331), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 64/84 (76%), Positives = 72/84 (85%)

Query: 16 YLFGSEEKPAAPPAPQTVSLPPYGIDTTTEKPQDNQAPNKPNVSNNYHRAQGQNTGNFIT 75
          YLFGS+E+P+APP  + V+LPPYG+D T EKP D+ +  K  VSNNYHRAQGQNTGNFI 
Sbjct: 16 YLFGSDEQPSAPPPLRPVNLPPYGVDITVEKPPDSGSAEKKQVSNNYHRAQGQNTGNFIA 75

Query: 76 DRPSTKVKSVPGGDSSLGYLFGDK 99
          DRPSTKVKSVPGGDSSLGYLFGDK
Sbjct: 76 DRPSTKVKSVPGGDSSLGYLFGDK 99

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224071978|ref|XP_002303604.1| predicted protein [Populus trichocarpa] gi|118481859|gb|ABK92866.1| unknown [Populus trichocarpa] gi|118484209|gb|ABK93985.1| unknown [Populus trichocarpa] gi|222841036|gb|EEE78583.1| predicted protein [Populus trichocarpa]

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/84 (76%), Positives = 72/84 (85%)

Query: 16 YLFGSEEKPAAPPAPQTVSLPPYGIDTTTEKPQDNQAPNKPNVSNNYHRAQGQNTGNFIT 75
          YLFGS+E+P+APP  + V+LPPYG+D T EK  D+ +  K  VSNNYHRAQGQNTGNFIT
Sbjct: 16 YLFGSDEQPSAPPPSRPVNLPPYGVDITIEKSPDSGSSEKKPVSNNYHRAQGQNTGNFIT 75

Query: 76 DRPSTKVKSVPGGDSSLGYLFGDK 99
          DRPSTKVKSVPGGDSSLGYLFGDK
Sbjct: 76 DRPSTKVKSVPGGDSSLGYLFGDK 99

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255537565|ref|XP_002509849.1| SP1L, putative [Ricinus communis] gi|223549748|gb|EEF51236.1| SP1L, putative [Ricinus communis]

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/85 (75%), Positives = 69/85 (81%), Gaps = 1/85 (1%)

Query: 16  YLFGSEEKPAAPPAPQTVSLPPYGIDTTTEKPQ-DNQAPNKPNVSNNYHRAQGQNTGNFI 74
           YLFGS+E P  PP  QTV+LPPYG+D   EK   +N +  K  VSNNYHRAQGQNTGNFI
Sbjct: 16  YLFGSDENPTTPPPSQTVNLPPYGVDVIPEKNNPNNLSAEKGKVSNNYHRAQGQNTGNFI 75

Query: 75  TDRPSTKVKSVPGGDSSLGYLFGDK 99
           TDRPSTKVKSVPGGDSSLGYLFGDK
Sbjct: 76  TDRPSTKVKSVPGGDSSLGYLFGDK 100

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426170|ref|XP_002278988.1| PREDICTED: uncharacterized protein LOC100250191 [Vitis vinifera] gi|297742229|emb|CBI34378.3| unnamed protein product [Vitis vinifera]

 Score =  112 bits (280), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/85 (68%), Positives = 65/85 (76%), Gaps = 1/85 (1%)

Query: 16  YLFGSEEKPAAPPAPQTVSLPPYGIDTT-TEKPQDNQAPNKPNVSNNYHRAQGQNTGNFI 74
           YLFGS+E+P+ PP   T+ LPPYGIDT   + P       K + SNNY R QGQNTGNFI
Sbjct: 16  YLFGSDEQPSEPPVSPTIQLPPYGIDTIPEKPPNRPPPAEKQSSSNNYQRTQGQNTGNFI 75

Query: 75  TDRPSTKVKSVPGGDSSLGYLFGDK 99
           TDRPSTKV+SVPGGDSSLGYLFGDK
Sbjct: 76  TDRPSTKVRSVPGGDSSLGYLFGDK 100

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21592628|gb|AAM64577.1| putative nitrilase-associated protein [Arabidopsis thaliana]

 Score = 99.0 bits (245), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/110 (53%), Positives = 67/110 (60%), Gaps = 17/110 (15%)

Query: 1   MSRGGSYGGGQSSLGYLFGSEEKP-------------AAPPAPQTVSLPPYGIDTTTEKP 47
           M RG S GGGQSSLGYLFGS E P             ++  AP T +  P  +D+  + P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAPNAVDSIKQVP 60

Query: 48  QDNQAPNKPNVSNNYHRAQGQNTGNFITDRPSTKVKSVPGGDSSLGYLFG 97
               A    N +NNY RA+GQNTGNFITDRPSTKV S PGG SSL YLFG
Sbjct: 61  ----AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLAYLFG 106

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297841653|ref|XP_002888708.1| hypothetical protein ARALYDRAFT_476049 [Arabidopsis lyrata subsp. lyrata] gi|297334549|gb|EFH64967.1| hypothetical protein ARALYDRAFT_476049 [Arabidopsis lyrata subsp. lyrata]

 Score = 98.2 bits (243), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 59/110 (53%), Positives = 67/110 (60%), Gaps = 17/110 (15%)

Query: 1   MSRGGSYGGGQSSLGYLFGSEEKP-------------AAPPAPQTVSLPPYGIDTTTEKP 47
           M RG S GGGQSSLGYLFGS E P             ++ PAP   +  P  +D+  + P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKPSTVNKAPAETQSSAPAPPLQTAAPKAVDSIKQVP 60

Query: 48  QDNQAPNKPNVSNNYHRAQGQNTGNFITDRPSTKVKSVPGGDSSLGYLFG 97
               A    N +NNY RA+GQNTGNFITDRPSTKV S PGG SSL YLFG
Sbjct: 61  ----AGLNSNSTNNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLNYLFG 106

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726476|ref|NP_001236360.1| uncharacterized protein LOC100526947 [Glycine max] gi|255631222|gb|ACU15978.1| unknown [Glycine max]

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/84 (59%), Positives = 58/84 (69%)

Query: 16 YLFGSEEKPAAPPAPQTVSLPPYGIDTTTEKPQDNQAPNKPNVSNNYHRAQGQNTGNFIT 75
          YLFGSEEKP  P   +T  LPPYGID     P    AP+   +  + +R+QG + GN +T
Sbjct: 16 YLFGSEEKPNQPLPTKTAPLPPYGIDIDNAAPPHAVAPSNTQLVVSNNRSQGHHLGNIVT 75

Query: 76 DRPSTKVKSVPGGDSSLGYLFGDK 99
          DRPSTKVKSVPGG SSLGYLFGDK
Sbjct: 76 DRPSTKVKSVPGGHSSLGYLFGDK 99

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141087|ref|XP_002323906.1| predicted protein [Populus trichocarpa] gi|222866908|gb|EEF04039.1| predicted protein [Populus trichocarpa]

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/103 (55%), Positives = 65/103 (63%), Gaps = 6/103 (5%)

Query: 1   MSRGGSYGGGQSSLGYLFGSEE----KPAAPPAPQTVSLPPYGIDTTTEKPQDNQAPN-- 54
           M RG S GGGQSSLGYLFG+ E     P A     + S+ P     +   P D Q P   
Sbjct: 1   MGRGVSAGGGQSSLGYLFGNGEPANNSPVAKNVGNSASISPSPKPASASPPIDKQTPAGI 60

Query: 55  KPNVSNNYHRAQGQNTGNFITDRPSTKVKSVPGGDSSLGYLFG 97
             N++NNY+RA GQN GNFITDRPSTKV + PGG SSLGYLFG
Sbjct: 61  HGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLGYLFG 103

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457568|ref|XP_004146520.1| PREDICTED: protein SPIRAL1-like 5-like [Cucumis sativus] gi|449499933|ref|XP_004160958.1| PREDICTED: protein SPIRAL1-like 5-like [Cucumis sativus]

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/85 (58%), Positives = 61/85 (71%), Gaps = 2/85 (2%)

Query: 16  YLFGSEEKPAAPPAPQTVSLPPYGIDTTTEKPQDNQAPNKPNV--SNNYHRAQGQNTGNF 73
           YLFG +++P  P   + V  PPYGID   +   +N +P+   +  +NNY RA GQN+GNF
Sbjct: 16  YLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNF 75

Query: 74  ITDRPSTKVKSVPGGDSSLGYLFGD 98
           ITDRPSTKVKS PGGDSSLGYLFGD
Sbjct: 76  ITDRPSTKVKSAPGGDSSLGYLFGD 100

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	99
TAIR|locus:505006517	99	SP1L5 "AT4G23496" [Arabidopsis	0.717	0.717	0.662	2.6e-22
TAIR|locus:2026441	110	SP1L2 "AT1G69230" [Arabidopsis	0.727	0.654	0.526	3.8e-14
TAIR|locus:4515102592	113	SP1L1 "SPIRAL1-like1" [Arabido	0.676	0.592	0.520	9.1e-13
TAIR|locus:2044224	119	SPR1 "AT2G03680" [Arabidopsis	0.717	0.596	0.518	2.4e-12
TAIR|locus:2180902	127	SP1L4 "AT5G15600" [Arabidopsis	0.555	0.433	0.576	2.4e-12
TAIR|locus:2076537	122	SP1L3 "AT3G02180" [Arabidopsis	0.585	0.475	0.566	3.9e-12

TAIR|locus:505006517 SP1L5 "AT4G23496" [Arabidopsis thaliana (taxid:3702)]

 Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 51/77 (66%), Positives = 60/77 (77%)

Query:    24 PAAPPAPQTVSLPPYGIDTTTEKPQDNQAPNKPNVSNN-YHRAQGQNTGNFITDRPSTKV 82
             PA P AP+    PPYG+D+T E   D++A  KP +SNN Y R QGQN+GNF+TDRP+TKV
Sbjct:    28 PAPPVAPKPA--PPYGVDSTEE---DHEADQKPKISNNNYQRVQGQNSGNFVTDRPTTKV 82

Query:    83 KSVPGGDSSLGYLFGDK 99
             KSVPGG SSLGYLFGDK
Sbjct:    83 KSVPGGGSSLGYLFGDK 99

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2026441 SP1L2 "AT1G69230" [Arabidopsis thaliana (taxid:3702)]

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 40/76 (52%), Positives = 48/76 (63%)

Query:    22 EKPAAPPAPQTVSLPPYGIDTTTEKPQDNQAPNKPNVSNNYHRAQGQNTGNFITDRPSTK 81
             E  ++  AP T +     +D+  + P    A    N +NNY RA+GQNTGNFITDRPSTK
Sbjct:    35 ETESSAHAPPTQAAAANAVDSIKQVP----AGLNSNSANNYMRAEGQNTGNFITDRPSTK 90

Query:    82 VKSVPGGDSSLGYLFG 97
             V S PGG SSL YLFG
Sbjct:    91 VHSAPGGGSSLDYLFG 106

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:4515102592 SP1L1 "SPIRAL1-like1" [Arabidopsis thaliana (taxid:3702)]

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 38/73 (52%), Positives = 49/73 (67%)

Query:    25 AAPPAPQTVSLPPYGIDTTTEKPQDNQAPNKPNVSNNYHRAQGQNTGNFITDRPSTKVKS 84
             +A P+P+ V+     ++ T + P      NK + +NNY RA GQNTGNF+TDRPSTKV +
Sbjct:    42 SADPSPKHVAAQT--VNVTKQIPA---GINKSS-TNNYIRADGQNTGNFLTDRPSTKVHA 95

Query:    85 VPGGDSSLGYLFG 97
              PGG SSL YLFG
Sbjct:    96 APGGGSSLDYLFG 108

GO:0005886 "plasma membrane" evidence=ISM

TAIR|locus:2044224 SPR1 "AT2G03680" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 41/79 (51%), Positives = 49/79 (62%)

Query:    28 PAPQTVSLPPYGIDTTTE--KPQD--NQAPN--KPNVSNNYHRAQGQNTGNFITDRPSTK 81
             PAP   ++    + T T   +P +   Q P   K  V NNY RA+GQNTGNF+TDRPSTK
Sbjct:    42 PAPPVTAVTATALTTATTSVEPAELNKQIPAGIKTPV-NNYARAEGQNTGNFLTDRPSTK 100

Query:    82 VKSVPGGDSSLGYLF-GDK 99
             V + PGG SSL YLF G K
Sbjct:   101 VHAAPGGGSSLDYLFTGGK 119

GO:0003674 "molecular_function" evidence=ND

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0055028 "cortical microtubule" evidence=IDA

GO:0005876 "spindle microtubule" evidence=IDA

GO:0009524 "phragmoplast" evidence=IDA

GO:0009574 "preprophase band" evidence=IDA

GO:0010005 "cortical microtubule, transverse to long axis" evidence=IDA

GO:0051211 "anisotropic cell growth" evidence=IMP

GO:0043622 "cortical microtubule organization" evidence=IGI

GO:0071472 "cellular response to salt stress" evidence=IGI

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2180902 SP1L4 "AT5G15600" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 34/59 (57%), Positives = 43/59 (72%)

Query:    42 TTT---EKPQDNQAPNKPNVSNNYHRAQGQNTGNFITDRPSTKVKSVPGGDSSLGYLFG 97
             TTT    K ++N A  + +  NNY+R+ GQN GNF+T+RPSTKV + PGG SSLGYLFG
Sbjct:    62 TTTGDKNKTEENSAGVRGS-PNNYYRSDGQNCGNFLTERPSTKVHAAPGGGSSLGYLFG 119

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2076537 SP1L3 "AT3G02180" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 34/60 (56%), Positives = 40/60 (66%)

Query:    40 IDTTTEKPQDNQAPNKP--NVSNNYHRAQGQNTGNFITDRPSTKVKSVPGGDSSLGYLFG 97
             I TTT    DN+  +       NNY R++GQN GNF+TDRPSTKV + PGG SSL YLFG
Sbjct:    53 ITTTTTTVTDNKKTSAGVRGSPNNYFRSEGQNCGNFLTDRPSTKVHAAPGGGSSLDYLFG 112


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.305   0.128   0.376    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       99        80   0.00091  102 3  11 23  0.42    30
                                                     29  0.41    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  443 (47 KB)
  Total size of DFA:  88 KB (2068 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.76u 0.11s 14.87t   Elapsed:  00:00:01
  Total cpu time:  14.76u 0.11s 14.87t   Elapsed:  00:00:01
  Start:  Fri May 10 20:06:44 2013   End:  Fri May 10 20:06:45 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LE54	SP1L2_ARATH	No assigned EC number	0.5272	0.9393	0.8454	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_I0880 SubName- Full=Putative uncharacterized protein; (99 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00