Citrus Sinensis ID: 034507

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90--
Protein Sequence
MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI
Secondary Structure (PSIPRED)
ccHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHccccccHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHcccccccccccccccccEccccccEccccc
Coil and Loop (DISEMBL)
mavvdtlsthspdeeylgerqqpwiwsgdgeiTEAFFEFSAEIGRIEKEIEkrnsdpsrrnrcgagvlpyellvpssepgvtckgvpnsvsi
Flexible Loop (DISEMBL)
mavvdtlsthspdeeylgerqqpwiWSGDGEITEAFFEFSAEIGRIEKeiekrnsdpsrrnrCGAGVLPYellvpssepgvtckgvpnsvsi
Low Complexity Region (SEG)
MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAeigriekeiekrNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI
Disordered region (IsUnstruct)
*********************QPWIWSGDGEITEAFFEFSAEIGRI****************CGAGVLPYELLV******************
Disordered Region (DISOPRED)
MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI
Disordered Region (DISEMBL)
***************YLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIE********RNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI
Disordered Region (DISPRO)
MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVS*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	92	2.2.26 [Sep-21-2011]
Q9LNR3	919	Lipoxygenase 3, chloropla	yes	no	1.0	0.100	0.880	8e-44
Q9FNX8	926	Lipoxygenase 4, chloropla	no	no	1.0	0.099	0.858	8e-43
O24371	914	Linoleate 13S-lipoxygenas	N/A	no	1.0	0.100	0.793	2e-38
Q8H016	918	Probable lipoxygenase 6 O	yes	no	1.0	0.100	0.648	1e-27
Q8GSM2	896	Lipoxygenase 2.3, chlorop	N/A	no	0.989	0.101	0.532	6e-23
O24370	899	Linoleate 13S-lipoxygenas	N/A	no	0.989	0.101	0.565	3e-22
Q7XV13	899	Putative lipoxygenase 5 O	no	no	0.989	0.101	0.663	1e-21
Q9CAG3	917	Lipoxygenase 6, choloropl	no	no	1.0	0.100	0.548	6e-21
Q84YK8	941	Probable lipoxygenase 8,	no	no	0.978	0.095	0.526	1e-20
P38419	924	Lipoxygenase 7, chloropla	no	no	0.978	0.097	0.516	5e-20

>sp|Q9LNR3|LOX3_ARATH Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1

 Score =  175 bits (443), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 81/92 (88%), Positives = 87/92 (94%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           MAVVDTLSTHSPDEEY+GERQQP IW+GD EI EAF+ F+AEIGRIEKEIEKRN+DP RR
Sbjct: 828 MAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRR 887

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NRCGAGVLPYELLVPSSEPGVTC+GVPNSVSI
Sbjct: 888 NRCGAGVLPYELLVPSSEPGVTCRGVPNSVSI 919

13S-lipoxygenase that can use linolenic acid as substrates. Plant lipoxygenases may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 3EC: .EC: 1EC: 1EC: .EC: 1EC: 2

>sp|Q9FNX8|LOX4_ARATH Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1

 Score =  172 bits (435), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 79/92 (85%), Positives = 86/92 (93%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           MAVVDTLSTHSPDEEY+GERQQP IW+GD EI +AF+ FSAEIGRIEKEI+KRN DPSRR
Sbjct: 835 MAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVDAFYGFSAEIGRIEKEIDKRNRDPSRR 894

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NRCGAGVLPYEL+ PSSEPGVTC+GVPNSVSI
Sbjct: 895 NRCGAGVLPYELMAPSSEPGVTCRGVPNSVSI 926

Plant lipoxygenases may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure (By similarity). 13S-lipoxygenase that can use linolenic acid as substrates.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|O24371|LOX31_SOLTU Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum tuberosum GN=LOX3.1 PE=1 SV=1

 Score =  157 bits (398), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 73/92 (79%), Positives = 82/92 (89%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           MAVVDTLSTHSPDEEYLGER QP  W+GD EI EAF++FSAEIGRIEKEI++RN++   +
Sbjct: 823 MAVVDTLSTHSPDEEYLGERHQPSTWTGDAEIVEAFYKFSAEIGRIEKEIDERNANTKLK 882

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NRCGAGVLPYELL PSS PGVTC+GVPNSVSI
Sbjct: 883 NRCGAGVLPYELLAPSSGPGVTCRGVPNSVSI 914

Plant lipoxygenases may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Required for the regulation of wound-induced gene expression, but is not involved in the bulk production of jasmonate upon wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure. Linolenic acid is the preferred substrate, before linoleic and arachidonic acids.

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q8H016|LOX6_ORYSJ Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2

 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/94 (64%), Positives = 73/94 (77%), Gaps = 2/94 (2%)

Query: 1   MAVVDTLSTHSPDEEYLGE-RQQPWI-WSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPS 58
           MAVVDTLSTHSPDEEYLGE R +  + W+ D     A   F+A++ R E+ IE+RN+D  
Sbjct: 825 MAVVDTLSTHSPDEEYLGEGRDEGGVPWTADEAAVAAHGMFAADVRRAEETIERRNADHG 884

Query: 59  RRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           R+NRCGAGVLPYELL PSS PGVTC+GVPNS+SI
Sbjct: 885 RKNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 918

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q8GSM2|LOX23_HORVU Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1

 Score =  105 bits (263), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 49/92 (53%), Positives = 66/92 (71%), Gaps = 1/92 (1%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           MA +D LS+HSPDEEY+GE  +P  W  +  +  AF +FS  +   E  I+ RN++P  +
Sbjct: 806 MATLDILSSHSPDEEYMGEYAEP-AWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENK 864

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NRCGAG++PYELL P SEPGVT +G+PNS+SI
Sbjct: 865 NRCGAGIVPYELLKPFSEPGVTGRGIPNSISI 896

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. This enzyme exhibits linoleate 13-lipoxygenase activity.

Hordeum vulgare (taxid: 4513)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1

 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 52/92 (56%), Positives = 66/92 (71%), Gaps = 1/92 (1%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           MA++D LS HSPDEEY+GE+ +P+ W+ D  I  AF  FS ++  +E  I+ RN+D    
Sbjct: 809 MAILDVLSNHSPDEEYIGEKIEPY-WAEDPVINAAFEVFSGKLKELEGIIDARNNDSKLS 867

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NR GAGV+PYELL P SEPGVT KGVP S+SI
Sbjct: 868 NRNGAGVMPYELLKPYSEPGVTGKGVPYSISI 899

Plant lipoxygenase involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence. May not be involved in the bulk production of jasmonate upon wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure. Linolenic acid is the preferred substrate, before linoleic and arachidonic acids. Has also some activity with phosphatidylglycerol, but not with galactolipids.

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q7XV13|LOX5_ORYSJ Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2

 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/92 (66%), Positives = 73/92 (79%), Gaps = 1/92 (1%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           M V+DTLSTHS DEEYLGER     W+ D     A  EF+A++ R E+EIE+RN+DPSRR
Sbjct: 809 MTVIDTLSTHSADEEYLGERPDE-AWTADPAALAAAREFAADVRRAEEEIERRNADPSRR 867

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NRCGAGVLPYEL+ PSS PG+TC+GVPNSV+I
Sbjct: 868 NRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 899

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q9CAG3|LOX6_ARATH Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1

 Score = 99.4 bits (246), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 51/93 (54%), Positives = 67/93 (72%), Gaps = 1/93 (1%)

Query: 1   MAVVDTLSTHSPDEEYLGE-RQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSR 59
           MAV +TLSTHSPDEEYL E R+    W  D ++ + F +FS E+ +IEK I +RN D   
Sbjct: 825 MAVQETLSTHSPDEEYLIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKL 884

Query: 60  RNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           +NR GAG+ PYELL+P+S  GVT +G+PNS+SI
Sbjct: 885 KNRTGAGMPPYELLLPTSPHGVTGRGIPNSISI 917

Plant lipoxygenases may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure (By similarity). 13S-lipoxygenase that can use linolenic acid as substrates.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q84YK8|LOXC2_ORYSJ Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/93 (52%), Positives = 64/93 (68%), Gaps = 3/93 (3%)

Query: 1   MAVVDTLSTHSPDEEYLG-ERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSR 59
           MAV+D LSTHS DEEYLG E+ +PW  + D  +  A+  F+A +  IE  I+ RN D   
Sbjct: 851 MAVLDVLSTHSTDEEYLGGEQTRPW--NSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKL 908

Query: 60  RNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           +NRCGAG+LPY+L+ P S+ GVT  G+PNS SI
Sbjct: 909 KNRCGAGILPYQLMKPFSDAGVTGMGIPNSTSI 941

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. It catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|P38419|LOXC1_ORYSJ Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2

 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 48/93 (51%), Positives = 64/93 (68%), Gaps = 3/93 (3%)

Query: 1   MAVVDTLSTHSPDEEYLG-ERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSR 59
           MAV+D LS+HS DEEYLG E+ +PW  + D  +  A+  F+A +  IE  I+ RN D   
Sbjct: 834 MAVLDVLSSHSTDEEYLGGEQTRPW--NSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKL 891

Query: 60  RNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           +NRCGAG+LPY+L+ P S+ GVT  G+PNS SI
Sbjct: 892 KNRCGAGILPYQLMKPFSDSGVTGMGIPNSTSI 924

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. This lipoxygenase introduces molecular oxygen exclusively into the C-13 position of linoleic and linolenic acids.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	92
9665131	912	lipoxygenase [Arabidopsis thaliana]	1.0	0.100	0.880	3e-42
6002055	919	lipoxygenase [Arabidopsis thaliana]	1.0	0.100	0.880	3e-42
297844686	919	hypothetical protein ARALYDRAFT_471947 [	1.0	0.100	0.880	3e-42
18394479	919	lipoxygenase 3 [Arabidopsis thaliana] gi	1.0	0.100	0.880	3e-42
297839111	921	hypothetical protein ARALYDRAFT_476385 [	1.0	0.099	0.869	2e-41
15218506	926	lipoxygenase 4 [Arabidopsis thaliana] gi	1.0	0.099	0.858	3e-41
12323766	702	putative lipoxygenase, 5' partial; 10110	1.0	0.131	0.858	6e-41
255587715	445	lipoxygenase, putative [Ricinus communis	1.0	0.206	0.847	7e-40
449447902	907	PREDICTED: linoleate 13S-lipoxygenase 3-	1.0	0.101	0.826	1e-38
449480516	907	PREDICTED: LOW QUALITY PROTEIN: linoleat	1.0	0.101	0.826	1e-38

>gi|9665131|gb|AAF97315.1|AC007843_18 lipoxygenase [Arabidopsis thaliana]

 Score =  175 bits (443), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 81/92 (88%), Positives = 87/92 (94%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           MAVVDTLSTHSPDEEY+GERQQP IW+GD EI EAF+ F+AEIGRIEKEIEKRN+DP RR
Sbjct: 821 MAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRR 880

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NRCGAGVLPYELLVPSSEPGVTC+GVPNSVSI
Sbjct: 881 NRCGAGVLPYELLVPSSEPGVTCRGVPNSVSI 912

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6002055|emb|CAB56692.1| lipoxygenase [Arabidopsis thaliana]

 Score =  175 bits (443), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 81/92 (88%), Positives = 87/92 (94%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           MAVVDTLSTHSPDEEY+GERQQP IW+GD EI EAF+ F+AEIGRIEKEIEKRN+DP RR
Sbjct: 828 MAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRR 887

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NRCGAGVLPYELLVPSSEPGVTC+GVPNSVSI
Sbjct: 888 NRCGAGVLPYELLVPSSEPGVTCRGVPNSVSI 919

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297844686|ref|XP_002890224.1| hypothetical protein ARALYDRAFT_471947 [Arabidopsis lyrata subsp. lyrata] gi|297336066|gb|EFH66483.1| hypothetical protein ARALYDRAFT_471947 [Arabidopsis lyrata subsp. lyrata]

 Score =  175 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 81/92 (88%), Positives = 87/92 (94%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           MAVVDTLSTHSPDEEY+GERQQP IW+GD EI EAF+ F+AEIGRIEKEIEKRN+DP RR
Sbjct: 828 MAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRR 887

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NRCGAGVLPYELLVPSSEPGVTC+GVPNSVSI
Sbjct: 888 NRCGAGVLPYELLVPSSEPGVTCRGVPNSVSI 919

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18394479|ref|NP_564021.1| lipoxygenase 3 [Arabidopsis thaliana] gi|75264086|sp|Q9LNR3.1|LOX3_ARATH RecName: Full=Lipoxygenase 3, chloroplastic; Short=AtLOX3; Flags: Precursor gi|8778453|gb|AAF79461.1|AC022492_5 F1L3.11 [Arabidopsis thaliana] gi|19715630|gb|AAL91636.1| At1g17420/F1L3_1 [Arabidopsis thaliana] gi|30102476|gb|AAP21156.1| At1g17420/F1L3_1 [Arabidopsis thaliana] gi|332191464|gb|AEE29585.1| lipoxygenase 3 [Arabidopsis thaliana]

 Score =  175 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 81/92 (88%), Positives = 87/92 (94%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           MAVVDTLSTHSPDEEY+GERQQP IW+GD EI EAF+ F+AEIGRIEKEIEKRN+DP RR
Sbjct: 828 MAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRR 887

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NRCGAGVLPYELLVPSSEPGVTC+GVPNSVSI
Sbjct: 888 NRCGAGVLPYELLVPSSEPGVTCRGVPNSVSI 919

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297839111|ref|XP_002887437.1| hypothetical protein ARALYDRAFT_476385 [Arabidopsis lyrata subsp. lyrata] gi|297333278|gb|EFH63696.1| hypothetical protein ARALYDRAFT_476385 [Arabidopsis lyrata subsp. lyrata]

 Score =  172 bits (437), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 80/92 (86%), Positives = 86/92 (93%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           MAVVDTLSTHSPDEEY+GERQQP IW+GD EI +AF+ FSAEIGRIEKEIEKRN DPSRR
Sbjct: 830 MAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVDAFYGFSAEIGRIEKEIEKRNRDPSRR 889

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NRCGAGVLPYEL+ PSSEPGVTC+GVPNSVSI
Sbjct: 890 NRCGAGVLPYELMAPSSEPGVTCRGVPNSVSI 921

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15218506|ref|NP_177396.1| lipoxygenase 4 [Arabidopsis thaliana] gi|75309247|sp|Q9FNX8.1|LOX4_ARATH RecName: Full=Lipoxygenase 4, chloroplastic; Short=AtLOX4; AltName: Full=LOX3-like protein; Flags: Precursor gi|12325264|gb|AAG52571.1|AC016529_2 putative lipoxygenase; 4618-640 [Arabidopsis thaliana] gi|11967675|emb|CAC19364.1| lipoxygenase [Arabidopsis thaliana] gi|15810255|gb|AAL07015.1| putative lipoxygenase [Arabidopsis thaliana] gi|20259579|gb|AAM14132.1| putative lipoxygenase [Arabidopsis thaliana] gi|332197213|gb|AEE35334.1| lipoxygenase 4 [Arabidopsis thaliana]

 Score =  172 bits (435), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 79/92 (85%), Positives = 86/92 (93%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           MAVVDTLSTHSPDEEY+GERQQP IW+GD EI +AF+ FSAEIGRIEKEI+KRN DPSRR
Sbjct: 835 MAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVDAFYGFSAEIGRIEKEIDKRNRDPSRR 894

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NRCGAGVLPYEL+ PSSEPGVTC+GVPNSVSI
Sbjct: 895 NRCGAGVLPYELMAPSSEPGVTCRGVPNSVSI 926

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|12323766|gb|AAG51846.1|AC010926_9 putative lipoxygenase, 5' partial; 101105-97928 [Arabidopsis thaliana]

 Score =  171 bits (432), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 79/92 (85%), Positives = 86/92 (93%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           MAVVDTLSTHSPDEEY+GERQQP IW+GD EI +AF+ FSAEIGRIEKEI+KRN DPSRR
Sbjct: 611 MAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVDAFYGFSAEIGRIEKEIDKRNRDPSRR 670

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NRCGAGVLPYEL+ PSSEPGVTC+GVPNSVSI
Sbjct: 671 NRCGAGVLPYELMAPSSEPGVTCRGVPNSVSI 702

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255587715|ref|XP_002534368.1| lipoxygenase, putative [Ricinus communis] gi|223525418|gb|EEF28014.1| lipoxygenase, putative [Ricinus communis]

 Score =  167 bits (423), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 78/92 (84%), Positives = 84/92 (91%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           MAVVDTLSTHSPDEEYLGERQQP  WSGD E+ E+F+EFSAE+GRIEKEIE+RN DP  R
Sbjct: 354 MAVVDTLSTHSPDEEYLGERQQPSTWSGDAEMIESFYEFSAEMGRIEKEIERRNKDPKLR 413

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NRCGAGVLPYELL PSSEPGVTC+GVPNSVSI
Sbjct: 414 NRCGAGVLPYELLAPSSEPGVTCRGVPNSVSI 445

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449447902|ref|XP_004141705.1| PREDICTED: linoleate 13S-lipoxygenase 3-1, chloroplastic-like [Cucumis sativus]

 Score =  163 bits (412), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 76/92 (82%), Positives = 84/92 (91%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           MAVVDTLSTHSPDEEYLGERQQP IW+GD E+ EAF+ FSAEIGRIEKEI++RN+D   +
Sbjct: 816 MAVVDTLSTHSPDEEYLGERQQPSIWTGDAEMVEAFYGFSAEIGRIEKEIDRRNADGRLK 875

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NRCGAGVLPYELL PSSEPGVTC+GVPNSVSI
Sbjct: 876 NRCGAGVLPYELLAPSSEPGVTCRGVPNSVSI 907

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449480516|ref|XP_004155917.1| PREDICTED: LOW QUALITY PROTEIN: linoleate 13S-lipoxygenase 3-1, chloroplastic-like [Cucumis sativus]

 Score =  163 bits (412), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 76/92 (82%), Positives = 84/92 (91%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           MAVVDTLSTHSPDEEYLGERQQP IW+GD E+ EAF+ FSAEIGRIEKEI++RN+D   +
Sbjct: 816 MAVVDTLSTHSPDEEYLGERQQPSIWTGDAEMVEAFYGFSAEIGRIEKEIDRRNADGRLK 875

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NRCGAGVLPYELL PSSEPGVTC+GVPNSVSI
Sbjct: 876 NRCGAGVLPYELLAPSSEPGVTCRGVPNSVSI 907

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	92
TAIR|locus:2018848	919	LOX3 "lipoxygenase 3" [Arabido	1.0	0.100	0.75	2.5e-32
TAIR|locus:2030215	926	LOX4 "lipoxygenase 4" [Arabido	1.0	0.099	0.739	6.9e-32
UNIPROTKB|P38419	924	CM-LOX1 "Lipoxygenase 7, chlor	0.978	0.097	0.473	3.8e-16
TAIR|locus:2008808	917	LOX6 "lipoxygenase 6" [Arabido	1.0	0.100	0.483	1.6e-15
TAIR|locus:2096915	896	LOX2 "lipoxygenase 2" [Arabido	0.989	0.101	0.467	1.8e-14
TAIR|locus:2011030	859	LOX1 "lipoxygenase 1" [Arabido	0.989	0.105	0.434	2.6e-13
UNIPROTKB|P29250	870	LOX1.1 "Linoleate 9S-lipoxygen	0.989	0.104	0.377	1.1e-11
TAIR|locus:2087837	886	LOX5 [Arabidopsis thaliana (ta	0.989	0.102	0.402	2.9e-11

TAIR|locus:2018848 LOX3 "lipoxygenase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 364 (133.2 bits), Expect = 2.5e-32, P = 2.5e-32
 Identities = 69/92 (75%), Positives = 75/92 (81%)

Query:     1 MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
             MAVVDTLSTHSPDEEY+GERQQP IW+GD EI EAF+ F+A            N+DP RR
Sbjct:   828 MAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRR 887

Query:    61 NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
             NRCGAGVLPYELLVPSSEPGVTC+GVPNSVSI
Sbjct:   888 NRCGAGVLPYELLVPSSEPGVTCRGVPNSVSI 919

GO:0009507 "chloroplast" evidence=ISM

GO:0009611 "response to wounding" evidence=IEP;RCA;TAS

GO:0009644 "response to high light intensity" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP;RCA

GO:0016165 "lipoxygenase activity" evidence=IDA

GO:0009620 "response to fungus" evidence=IEP;RCA

GO:0009555 "pollen development" evidence=IGI

GO:0009901 "anther dehiscence" evidence=IGI

GO:0048653 "anther development" evidence=IGI

GO:0080086 "stamen filament development" evidence=IGI

GO:0034440 "lipid oxidation" evidence=IDA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA;TAS

GO:0010200 "response to chitin" evidence=RCA

GO:0006952 "defense response" evidence=TAS

GO:0040007 "growth" evidence=TAS

TAIR|locus:2030215 LOX4 "lipoxygenase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 360 (131.8 bits), Expect = 6.9e-32, P = 6.9e-32
 Identities = 68/92 (73%), Positives = 74/92 (80%)

Query:     1 MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
             MAVVDTLSTHSPDEEY+GERQQP IW+GD EI +AF+ FSA            N DPSRR
Sbjct:   835 MAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVDAFYGFSAEIGRIEKEIDKRNRDPSRR 894

Query:    61 NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
             NRCGAGVLPYEL+ PSSEPGVTC+GVPNSVSI
Sbjct:   895 NRCGAGVLPYELMAPSSEPGVTCRGVPNSVSI 926

GO:0009507 "chloroplast" evidence=ISM

GO:0009611 "response to wounding" evidence=IEP;RCA;TAS

GO:0009617 "response to bacterium" evidence=IEP

GO:0016165 "lipoxygenase activity" evidence=IDA

GO:0010193 "response to ozone" evidence=IEP

GO:0009555 "pollen development" evidence=IGI

GO:0009901 "anther dehiscence" evidence=IGI

GO:0048653 "anther development" evidence=IGI

GO:0080086 "stamen filament development" evidence=IGI

GO:0034440 "lipid oxidation" evidence=IDA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA;TAS

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0052542 "defense response by callose deposition" evidence=RCA

GO:0006952 "defense response" evidence=TAS

GO:0040007 "growth" evidence=TAS

UNIPROTKB|P38419 CM-LOX1 "Lipoxygenase 7, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 213 (80.0 bits), Expect = 3.8e-16, P = 3.8e-16
 Identities = 44/93 (47%), Positives = 58/93 (62%)

Query:     1 MAVVDTLSTHSPDEEYLG-ERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSR 59
             MAV+D LS+HS DEEYLG E+ +PW  + D  +  A+  F+A            N D   
Sbjct:   834 MAVLDVLSSHSTDEEYLGGEQTRPW--NSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKL 891

Query:    60 RNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
             +NRCGAG+LPY+L+ P S+ GVT  G+PNS SI
Sbjct:   892 KNRCGAGILPYQLMKPFSDSGVTGMGIPNSTSI 924

GO:0009607 "response to biotic stimulus" evidence=ISS;IMP

GO:0009611 "response to wounding" evidence=ISS;IMP

GO:0016166 "phytoene dehydrogenase activity" evidence=ISS;IDA

GO:0051707 "response to other organism" evidence=ISS;IDA

TAIR|locus:2008808 LOX6 "lipoxygenase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 45/93 (48%), Positives = 58/93 (62%)

Query:     1 MAVVDTLSTHSPDEEYLGE-RQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSR 59
             MAV +TLSTHSPDEEYL E R+    W  D ++ + F +FS             N D   
Sbjct:   825 MAVQETLSTHSPDEEYLIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKL 884

Query:    60 RNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
             +NR GAG+ PYELL+P+S  GVT +G+PNS+SI
Sbjct:   885 KNRTGAGMPPYELLLPTSPHGVTGRGIPNSISI 917

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016165 "lipoxygenase activity" evidence=ISS;IDA

GO:0040007 "growth" evidence=ISS

GO:0034440 "lipid oxidation" evidence=IDA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=IMP;RCA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2096915 LOX2 "lipoxygenase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 43/92 (46%), Positives = 55/92 (59%)

Query:     1 MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
             M  +D LSTHSPDEEY+GE+Q+   W+ +  I  AF  F              N + + +
Sbjct:   806 MVTLDLLSTHSPDEEYIGEQQEA-SWANEPVINAAFERFKGKLQYLEGVIDERNVNITLK 864

Query:    61 NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
             NR GAGV+ YELL P+SE GVT  GVP S+SI
Sbjct:   865 NRAGAGVVKYELLKPTSEHGVTGMGVPYSISI 896

GO:0009507 "chloroplast" evidence=ISM;ISS;IDA;TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0080027 "response to herbivore" evidence=IEP

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009617 "response to bacterium" evidence=IEP

GO:0016165 "lipoxygenase activity" evidence=IMP;IDA

GO:0009620 "response to fungus" evidence=IEP

GO:0034440 "lipid oxidation" evidence=IDA

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009269 "response to desiccation" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009416 "response to light stimulus" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=IMP;RCA;TAS

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0015994 "chlorophyll metabolic process" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019216 "regulation of lipid metabolic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0031408 "oxylipin biosynthetic process" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

GO:0009414 "response to water deprivation" evidence=TAS

GO:0051707 "response to other organism" evidence=TAS

TAIR|locus:2011030 LOX1 "lipoxygenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 2.6e-13, P = 2.6e-13
 Identities = 40/92 (43%), Positives = 54/92 (58%)

Query:     1 MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
             +++++ LSTHS DE YLG+R     W+ + E  EAF +F              N D + +
Sbjct:   769 ISLIEILSTHSSDEVYLGQRDSKE-WAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLK 827

Query:    61 NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
             NR G   +PY LL PSSE GVT +G+PNSVSI
Sbjct:   828 NRTGLVKMPYTLLFPSSEGGVTGRGIPNSVSI 859

GO:0005737 "cytoplasm" evidence=ISM

GO:0010311 "lateral root formation" evidence=IMP

GO:0048364 "root development" evidence=IMP

GO:0016165 "lipoxygenase activity" evidence=ISS;IMP;IDA

GO:0034440 "lipid oxidation" evidence=IDA

GO:0009536 "plastid" evidence=IDA

GO:0009611 "response to wounding" evidence=RCA;TAS

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA;TAS

GO:0006952 "defense response" evidence=TAS

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0009816 "defense response to bacterium, incompatible interaction" evidence=IEP

GO:0030397 "membrane disassembly" evidence=TAS

GO:0040007 "growth" evidence=TAS

UNIPROTKB|P29250 LOX1.1 "Linoleate 9S-lipoxygenase 2" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 171 (65.3 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 37/98 (37%), Positives = 53/98 (54%)

Query:     1 MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
             +++++ LS HS DE YLG+R  P  W+ D +  EAF  F A            N DP R+
Sbjct:   774 ISLLEILSKHSSDEVYLGQRDTPE-WTSDAKALEAFKRFGARLTEIESRVVAMNKDPHRK 832

Query:    61 NRCGAGVLPYELLVPSSEP------GVTCKGVPNSVSI 92
             NR G    PY LL P++        G++ +G+PNS+SI
Sbjct:   833 NRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIPNSISI 870

GO:0005737 "cytoplasm" evidence=IDA

GO:0009607 "response to biotic stimulus" evidence=IDA

GO:0009611 "response to wounding" evidence=IDA

GO:0016165 "lipoxygenase activity" evidence=ISS;IDA

GO:0051707 "response to other organism" evidence=IDA

TAIR|locus:2087837 LOX5 [Arabidopsis thaliana (taxid:3702)]

 Score = 167 (63.8 bits), Expect = 2.9e-11, P = 2.9e-11
 Identities = 39/97 (40%), Positives = 53/97 (54%)

Query:     1 MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
             +++++ LS HS DE YLG+R  P  W+ D E  EAF  F              N+D   +
Sbjct:   791 ISIIEILSMHSTDEIYLGQRDSP-NWTADDEPLEAFKRFGKELELIENNIIRRNNDKRFK 849

Query:    61 NRCGAGVLPYELLVPSS-----EPGVTCKGVPNSVSI 92
             NR G   +PY LL P++     E G+T KG+PNSVSI
Sbjct:   850 NRTGPVNIPYTLLYPNTTDYTREGGITGKGIPNSVSI 886


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.132   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       92        80   0.00091  102 3  11 23  0.49    29
                                                     29  0.41    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  555 (59 KB)
  Total size of DFA:  112 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.32u 0.12s 8.44t   Elapsed:  00:00:01
  Total cpu time:  8.33u 0.12s 8.45t   Elapsed:  00:00:01
  Start:  Mon May 20 16:52:42 2013   End:  Mon May 20 16:52:43 2013

GO:0005737 "cytoplasm" evidence=ISM

GO:0016165 "lipoxygenase activity" evidence=ISS;IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0010311 "lateral root formation" evidence=IMP

GO:0048364 "root development" evidence=IMP

GO:0034440 "lipid oxidation" evidence=IDA

GO:0009536 "plastid" evidence=IDA

GO:1900366 "negative regulation of defense response to insect" evidence=IMP

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LNR3	LOX3_ARATH	1, ., 1, 3, ., 1, 1, ., 1, 2	0.8804	1.0	0.1001	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh2_kg.1__1901__AT1G17420.1 annotation not avaliable (919 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	92
PLN02264	919	PLN02264, PLN02264, lipoxygenase	2e-58
PLN02305	918	PLN02305, PLN02305, lipoxygenase	7e-32
PLN02337	866	PLN02337, PLN02337, lipoxygenase	2e-24
pfam00305	667	pfam00305, Lipoxygenase, Lipoxygenase	2e-23

>gnl|CDD|215148 PLN02264, PLN02264, lipoxygenase

 Score =  190 bits (485), Expect = 2e-58
 Identities = 82/92 (89%), Positives = 87/92 (94%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           MAVVDTLSTHSPDEEY+GERQQP IW+GD EI EAF+ FSAEIGRIEKEIEKRN+DPSRR
Sbjct: 828 MAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFSAEIGRIEKEIEKRNADPSRR 887

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NRCGAGVLPYELL PSSEPGVTC+GVPNSVSI
Sbjct: 888 NRCGAGVLPYELLAPSSEPGVTCRGVPNSVSI 919

Length = 919

>gnl|CDD|215174 PLN02305, PLN02305, lipoxygenase

 Score =  116 bits (291), Expect = 7e-32
 Identities = 55/93 (59%), Positives = 67/93 (72%), Gaps = 1/93 (1%)

Query: 1   MAVVDTLSTHSPDEEYLGE-RQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSR 59
           MAV DTLSTHSPDEEYLGE R     W  D E+ + F +FSA +  IEK I +RN D   
Sbjct: 826 MAVQDTLSTHSPDEEYLGELRHLHSHWINDHEVVKLFNKFSARLEEIEKTINERNKDIRL 885

Query: 60  RNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           +NR GAG+ PYELL+P+S PGVT +G+PNS+SI
Sbjct: 886 KNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI 918

Length = 918

>gnl|CDD|215193 PLN02337, PLN02337, lipoxygenase

 Score = 94.7 bits (236), Expect = 2e-24
 Identities = 43/96 (44%), Positives = 56/96 (58%), Gaps = 6/96 (6%)

Query: 2   AVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRRN 61
           ++++ LS HS DE YLG+R  P  W+ D E  EAF  F   +  IE  I   N DP  +N
Sbjct: 772 SLIEILSRHSSDEVYLGQRDTPE-WTSDAEPLEAFKRFGERLVEIENRIVDMNKDPRLKN 830

Query: 62  RCGAGVLPYELLVPSS-----EPGVTCKGVPNSVSI 92
           R G   +PY LL P++     E G+T KG+PNSVSI
Sbjct: 831 RVGPVKMPYTLLYPNTSDYTGEGGLTGKGIPNSVSI 866

Length = 866

>gnl|CDD|215847 pfam00305, Lipoxygenase, Lipoxygenase

 Score = 92.1 bits (229), Expect = 2e-23
 Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           ++V++ LS H+ DE YLG+R +   W+ D E   AF  F  ++  IEK+I +RN D S +
Sbjct: 593 LSVIEILSRHASDEVYLGQRDEEH-WTSDKEPLAAFKRFGKKLAEIEKKITERNKDLSLK 651

Query: 61  NRCGAGVLPYELLVPS 76
           NR G   +PY LL PS
Sbjct: 652 NRSGPVKMPYTLLKPS 667

Length = 667

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	92
PLN02264	919	lipoxygenase	100.0
PLN02305	918	lipoxygenase	100.0
PLN02337	866	lipoxygenase	100.0
PF00305	667	Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Li	99.91

>PLN02264 lipoxygenase

Probab=100.00  E-value=1.7e-36  Score=259.83  Aligned_cols=91  Identities=89%  Similarity=1.421  Sum_probs=88.5

Q ss_pred             CchhhccCCCCCCccCcccccCC-CCCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCcCCceeeccCCCC
Q 034507            1 MAVVDTLSTHSPDEEYLGERQQP-WIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRRNRCGAGVLPYELLVPSSEP   79 (92)
Q Consensus         1 m~~~~~LS~h~~dE~yLG~~~~~-~~w~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~knr~g~~~~PY~~L~P~~~~   79 (92)
                      |+++++||+|++||+||||+..+ + ||+|+++++||++|+++|++||++|++||+++++|||+||+++||+||+|+++|
T Consensus       828 ms~~~iLS~hs~dE~yLG~~~~~~~-w~~D~~~~~af~rF~~~L~eIe~~I~~RN~~~~~knR~G~~~~PY~lL~P~s~~  906 (919)
T PLN02264        828 MAVVDTLSTHSPDEEYIGERQQPSI-WTGDAEIVEAFYGFSAEIGRIEKEIEKRNADPSRRNRCGAGVLPYELLAPSSEP  906 (919)
T ss_pred             HHHHHHHhhcCCCceeccCCCCccc-cccCHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCCCCceeeCCCCCC
Confidence            68999999999999999998765 6 999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccCCccccccC
Q 034507           80 GVTCKGVPNSVSI   92 (92)
Q Consensus        80 g~t~~gIPnSIsI   92 (92)
                      |||||||||||||
T Consensus       907 G~T~~gIPNSISI  919 (919)
T PLN02264        907 GVTCRGVPNSVSI  919 (919)
T ss_pred             CCCcCCCCCcccC
Confidence            9999999999998

>PLN02305 lipoxygenase

Probab=100.00  E-value=1.1e-35  Score=254.80  Aligned_cols=91  Identities=59%  Similarity=0.943  Sum_probs=88.6

Q ss_pred             CchhhccCCCCCCccCcccccCC--CCCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCcCCceeeccCCC
Q 034507            1 MAVVDTLSTHSPDEEYLGERQQP--WIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRRNRCGAGVLPYELLVPSSE   78 (92)
Q Consensus         1 m~~~~~LS~h~~dE~yLG~~~~~--~~w~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~knr~g~~~~PY~~L~P~~~   78 (92)
                      |+++++||+|++||+||||+.++  . ||+|+++++||++|+++|++||++|++||+++++|||+||+++||+||+|+++
T Consensus       826 mav~~iLS~hs~de~yLG~~~~~~~~-w~~D~~~~~A~~rF~~~L~eIE~~I~~RN~~~~lkNR~G~~~~PY~lL~P~s~  904 (918)
T PLN02305        826 MAVQDTLSTHSPDEEYLGELRHLHSH-WINDHEVVKLFNKFSARLEEIEKTINERNKDIRLKNRNGAGIPPYELLLPTSG  904 (918)
T ss_pred             HHHHHHhccCCCCcccccCCCCcccc-cccCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccCCCCCCCccccCCCCC
Confidence            67899999999999999999875  6 99999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccCCccccccC
Q 034507           79 PGVTCKGVPNSVSI   92 (92)
Q Consensus        79 ~g~t~~gIPnSIsI   92 (92)
                      +|||||||||||||
T Consensus       905 ~G~T~rgIPNSISI  918 (918)
T PLN02305        905 PGVTGRGIPNSISI  918 (918)
T ss_pred             CCCCcCCCCCcccC
Confidence            99999999999998

>PLN02337 lipoxygenase

Probab=100.00  E-value=8.2e-35  Score=248.96  Aligned_cols=91  Identities=47%  Similarity=0.798  Sum_probs=88.7

Q ss_pred             CchhhccCCCCCCccCcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCcCCceeeccCC---
Q 034507            1 MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRRNRCGAGVLPYELLVPSS---   77 (92)
Q Consensus         1 m~~~~~LS~h~~dE~yLG~~~~~~~w~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~knr~g~~~~PY~~L~P~~---   77 (92)
                      |+++++||+|++||+|||++++++ ||+|+++++||++|+++|++||++|++||+++.+|||+||+++||+||+|++   
T Consensus       771 ~~l~~lLS~~s~de~yLG~~~~~~-w~~d~~~~~a~~~F~~~L~eIe~~I~~RN~~~~~knr~G~~~~PY~lL~P~~~~~  849 (866)
T PLN02337        771 ISLIEILSRHSSDEVYLGQRDTPE-WTSDAEPLEAFKRFGERLVEIENRIVDMNKDPRLKNRVGPVKMPYTLLYPNTSDY  849 (866)
T ss_pred             HHHHHHhccCCCCceeccCcCCcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcccCCCCCCceeeCCCCccc
Confidence            678999999999999999998768 9999999999999999999999999999999999999999999999999998   


Q ss_pred             --CCCcccCCccccccC
Q 034507           78 --EPGVTCKGVPNSVSI   92 (92)
Q Consensus        78 --~~g~t~~gIPnSIsI   92 (92)
                        ++|||||||||||||
T Consensus       850 ~~~~g~t~~gIPNSISI  866 (866)
T PLN02337        850 TGEGGLTGKGIPNSVSI  866 (866)
T ss_pred             cCCCCcccCCCCCcccC
Confidence              999999999999998

>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1

Probab=99.91  E-value=6.1e-25  Score=184.74  Aligned_cols=75  Identities=51%  Similarity=0.865  Sum_probs=64.9

Q ss_pred             CchhhccCCCCCCccCcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCcCCceeeccC
Q 034507            1 MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRRNRCGAGVLPYELLVPS   76 (92)
Q Consensus         1 m~~~~~LS~h~~dE~yLG~~~~~~~w~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~knr~g~~~~PY~~L~P~   76 (92)
                      |+++++||+|++||+|||+|+++. ||+|+++++||++|+++|++||++|++||+++++|||+||+++||+||+|+
T Consensus       593 ~~~~~~LS~~~~de~~Lg~~~~~~-w~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~~nr~g~~~~PY~~L~Ps  667 (667)
T PF00305_consen  593 MAVLELLSRHSPDEEYLGQYPEPH-WFSDPEAKAAFERFQEELKEIEEEIDERNKDRKLKNRNGPGKVPYTYLLPS  667 (667)
T ss_dssp             HHHHHHHTCB-TT--BTTT-SSTT-SSSSHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSGGGTTTTT----TTSST
T ss_pred             HHHHHHhccCCCCcccccCcCccc-ccccHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccCCCCCCCccccCCC
Confidence            678999999999999999999877 999999999999999999999999999999999999999999999999996

13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents the C-terminal region of these proteins.; GO: 0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 2P0M_A 3RDE_B 2IUJ_A 1RRL_B 1JNQ_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	92
2iuk_A	864	Crystal Structure Of Soybean Lipoxygenase-D Length		6e-17
1rov_A	857	Lipoxygenase-3 Treated With Cumene Hydroperoxide Le		1e-16
1ik3_A	857	Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydrope		1e-16
1fgr_A	839	Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Leng		6e-16
1fgt_A	839	Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Leng		6e-16
1fgm_A	839	Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Leng		6e-16
1fgq_A	839	Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Leng		6e-16
3bnb_A	839	Lipoxygenase-1 (Soybean) I553l Mutant Length = 839		6e-16
1fgo_A	839	Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Leng		6e-16
2sbl_B	839	The Three-Dimensional Structure Of An Arachidonic A		6e-16
3bne_A	839	Lipoxygenase-1 (Soybean) I553a Mutant Length = 839		6e-16
3pzw_A	839	Soybean Lipoxygenase-1 - Re-Refinement Length = 839		7e-16
3bnd_A	839	Lipoxygenase-1 (Soybean), I553v Mutant Length = 839		7e-16
1y4k_A	839	Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Leng		7e-16
3bnc_A	839	Lipoxygenase-1 (Soybean) I553g Mutant Length = 839		7e-16
2iuj_A	853	Crystal Structure Of Soybean Lipoxygenase-B Length		1e-14

>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D Length = 864

Iteration: 1
 Score = 82.4 bits (202), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
           ++V++ LS H+ DE YLGER+ P  W+ D +  EAF  F +            NSDPS R
Sbjct: 774 LSVIEILSRHASDEIYLGERETP-NWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLR 832
Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NR G   LPY LL  SSE G+T KG+PNS+SI
Sbjct: 833 NRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI 864

>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide Length = 857

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
           ++V++ LS H+ DE YLGER  P  W+ D    EAF  F              N+D   R
Sbjct: 767 LSVIEILSRHASDEVYLGERDNP-NWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLR 825
Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NRCG   +PY LL+PSS+ G+T +G+PNS+SI
Sbjct: 826 NRCGPVQMPYTLLLPSSKEGLTFRGIPNSISI 857

>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy- 9(Z),11(E)-Octadecadienoic Acid Length = 857

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
           ++V++ LS H+ DE YLGER  P  W+ D    EAF  F              N+D   R
Sbjct: 767 LSVIEILSRHASDEVYLGERDNP-NWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLR 825
Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NRCG   +PY LL+PSS+ G+T +G+PNS+SI
Sbjct: 826 NRCGPVQMPYTLLLPSSKEGLTFRGIPNSISI 857

>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Length = 839

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
           ++V++ LSTH+ DE YLG+R  P  W+ D +  +AF +F              N+DPS +
Sbjct: 748 LSVIEILSTHASDEVYLGQRDNPH-WTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQ 806
Query: 61  -NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
            NR G   LPY LL PSSE G+T +G+PNS+SI
Sbjct: 807 GNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839

>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Length = 839

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
           ++V++ LSTH+ DE YLG+R  P  W+ D +  +AF +F              N+DPS +
Sbjct: 748 LSVIEILSTHASDEVYLGQRDNPH-WTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQ 806
Query: 61  -NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
            NR G   LPY LL PSSE G+T +G+PNS+SI
Sbjct: 807 GNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839

>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Length = 839

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
           ++V++ LSTH+ DE YLG+R  P  W+ D +  +AF +F              N+DPS +
Sbjct: 748 LSVIEILSTHASDEVYLGQRDNPH-WTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQ 806
Query: 61  -NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
            NR G   LPY LL PSSE G+T +G+PNS+SI
Sbjct: 807 GNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839

>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Length = 839

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
           ++V++ LSTH+ DE YLG+R  P  W+ D +  +AF +F              N+DPS +
Sbjct: 748 LSVIEILSTHASDEVYLGQRDNPH-WTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQ 806
Query: 61  -NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
            NR G   LPY LL PSSE G+T +G+PNS+SI
Sbjct: 807 GNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839

>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant Length = 839

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
           ++V++ LSTH+ DE YLG+R  P  W+ D +  +AF +F              N+DPS +
Sbjct: 748 LSVIEILSTHASDEVYLGQRDNPH-WTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQ 806
Query: 61  -NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
            NR G   LPY LL PSSE G+T +G+PNS+SI
Sbjct: 807 GNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839

>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Length = 839

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
           ++V++ LSTH+ DE YLG+R  P  W+ D +  +AF +F              N+DPS +
Sbjct: 748 LSVIEILSTHASDEVYLGQRDNPH-WTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQ 806
Query: 61  -NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
            NR G   LPY LL PSSE G+T +G+PNS+SI
Sbjct: 807 GNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839

>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15- Lipoxygenase Length = 839

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
           ++V++ LSTH+ DE YLG+R  P  W+ D +  +AF +F              N+DPS +
Sbjct: 748 LSVIEILSTHASDEVYLGQRDNPH-WTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQ 806
Query: 61  -NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
            NR G   LPY LL PSSE G+T +G+PNS+SI
Sbjct: 807 GNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839

>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant Length = 839

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
           ++V++ LSTH+ DE YLG+R  P  W+ D +  +AF +F              N+DPS +
Sbjct: 748 LSVIEILSTHASDEVYLGQRDNPH-WTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQ 806
Query: 61  -NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
            NR G   LPY LL PSSE G+T +G+PNS+SI
Sbjct: 807 GNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839

>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement Length = 839

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
           ++V++ LSTH+ DE YLG+R  P  W+ D +  +AF +F              N+DPS +
Sbjct: 748 LSVIEILSTHASDEVYLGQRDNPH-WTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQ 806
Query: 61  -NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
            NR G   LPY LL PSSE G+T +G+PNS+SI
Sbjct: 807 GNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839

>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant Length = 839

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
           ++V++ LSTH+ DE YLG+R  P  W+ D +  +AF +F              N+DPS +
Sbjct: 748 LSVIEILSTHASDEVYLGQRDNPH-WTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQ 806
Query: 61  -NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
            NR G   LPY LL PSSE G+T +G+PNS+SI
Sbjct: 807 GNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839

>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Length = 839

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
           ++V++ LSTH+ DE YLG+R  P  W+ D +  +AF +F              N+DPS +
Sbjct: 748 LSVIEILSTHASDEVYLGQRDNPH-WTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQ 806
Query: 61  -NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
            NR G   LPY LL PSSE G+T +G+PNS+SI
Sbjct: 807 GNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839

>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant Length = 839

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
           ++V++ LSTH+ DE YLG+R  P  W+ D +  +AF +F              N+DPS +
Sbjct: 748 LSVIEILSTHASDEVYLGQRDNPH-WTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQ 806
Query: 61  -NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
            NR G   LPY LL PSSE G+T +G+PNS+SI
Sbjct: 807 GNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839

>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B Length = 853

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/92 (40%), Positives = 51/92 (55%)
Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXXNSDPSRR 60
           + +++ LS H+ DE YLG+R     W+ D    EAF  F              N+D + R
Sbjct: 762 LTIIEILSRHASDEFYLGQRDGGDYWTSDAGPLEAFKRFGKNLEEIEKKLIEKNNDETLR 821
Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NR G   +PY LL PSSE G+T +G+PNS+SI
Sbjct: 822 NRYGPAKMPYTLLYPSSEEGLTFRGIPNSISI 853

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	92
2iuj_A	853	Lipoxygenase L-5; dioxygenase, metal-binding, oxid	6e-33
2iuk_A	864	SEED lipoxygenase; iron, dioxygenase, metal-bindin	8e-31
1f8n_A	839	Lipoxygenase-1; dioxygenase, metalloprotein, fatty	3e-30
3fg1_A	696	Allene oxide synthase-lipoxygenase protein; arichi	5e-22
3dy5_A	1066	Allene oxide synthase-lipoxygenase protein; fusion	6e-22
3v98_A	691	Arachidonate 5-lipoxygenase; dioxygenase, oxidored	9e-22
3vf1_A	698	11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik	9e-21
1lox_A	662	15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot	4e-19
3d3l_A	541	Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir	2e-17
3rde_A	573	Arachidonate 12-lipoxygenase, 12S-type; C-terminal	4e-17

>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Length = 853

 Score =  118 bits (297), Expect = 6e-33
 Identities = 40/92 (43%), Positives = 59/92 (64%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           + +++ LS H+ DE YLG+R     W+ D    EAF  F   +  IEK++ ++N+D + R
Sbjct: 762 LTIIEILSRHASDEFYLGQRDGGDYWTSDAGPLEAFKRFGKNLEEIEKKLIEKNNDETLR 821

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NR G   +PY LL PSSE G+T +G+PNS+SI
Sbjct: 822 NRYGPAKMPYTLLYPSSEEGLTFRGIPNSISI 853

>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Length = 864

 Score =  112 bits (281), Expect = 8e-31
 Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 1/92 (1%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           ++V++ LS H+ DE YLGER+ P  W+ D +  EAF  F +++  IE +I  RNSDPS R
Sbjct: 774 LSVIEILSRHASDEIYLGERETP-NWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLR 832

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
           NR G   LPY LL  SSE G+T KG+PNS+SI
Sbjct: 833 NRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI 864

>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Length = 839

 Score =  111 bits (277), Expect = 3e-30
 Identities = 44/93 (47%), Positives = 66/93 (70%), Gaps = 2/93 (2%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPS-R 59
           ++V++ LSTH+ DE YLG+R  P  W+ D +  +AF +F  ++  IE+++ +RN+DPS +
Sbjct: 748 LSVIEILSTHASDEVYLGQRDNP-HWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQ 806

Query: 60  RNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
            NR G   LPY LL PSSE G+T +G+PNS+SI
Sbjct: 807 GNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839

>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Length = 696

 Score = 87.6 bits (216), Expect = 5e-22
 Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 19/92 (20%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           +A V  L+  S DE YLG          D +  +A   F  ++  I K+I++RN +    
Sbjct: 624 IATVYILTKFSEDERYLGNYSATAW--EDKDALDAINRFQDKLEDISKKIKQRNENLE-- 679

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
                  +PY  L+P          +PN  +I
Sbjct: 680 -------VPYIYLLPER--------IPNGTAI 696

>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Length = 1066

 Score = 87.2 bits (215), Expect = 6e-22
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 19/92 (20%)

Query: 1    MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
            +A V  L+  S DE YLG       W  D +  +A   F  ++  I K+I++RN +    
Sbjct: 994  IATVYILTKFSEDERYLGNYSATA-WE-DKDALDAINRFQDKLEDISKKIKQRNENLE-- 1049

Query: 61   NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
                   +PY  L+P          +PN  +I
Sbjct: 1050 -------VPYIYLLPER--------IPNGTAI 1066

>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Length = 691

 Score = 86.9 bits (214), Expect = 9e-22
 Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 19/92 (20%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           +  V  LS    +E +LG   +      +  + EA   F   +  I   I +RN +    
Sbjct: 619 LGAVWALSQFQENELFLGMYPEEHF--IEKPVKEAMARFRKNLEAIVSVIAERNENLQ-- 674

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
                  LPY  L P          +PNSV+I
Sbjct: 675 -------LPYYYLDPDR--------IPNSVAI 691

>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Length = 698

 Score = 83.8 bits (206), Expect = 9e-21
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 19/92 (20%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           ++VV+ L+T  P E++LG+        GD     A  +F + +  I K+I +RN      
Sbjct: 626 VSVVNALTTIYPTEKFLGDYADNLF--GDAAAHAAMAKFKSNLANITKQITERNQG---- 679

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
                 V PY  L+P          VPNS++I
Sbjct: 680 -----MVSPYTWLIPGH--------VPNSIAI 698

>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Length = 662

 Score = 79.5 bits (195), Expect = 4e-19
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 19/92 (20%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           M++V  L    P    LG+ Q+ +      E      +F  E+  ++KEIE RN      
Sbjct: 590 MSIVWQLGRDQPIMVPLGQHQEEYF--SGPEPRAVLEKFREELAIMDKEIEVRNEKLD-- 645

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
                  +PYE L PS         V NSV+I
Sbjct: 646 -------IPYEYLRPSI--------VENSVAI 662

>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} Length = 541

 Score = 74.5 bits (182), Expect = 2e-17
 Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 19/91 (20%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           MA+   LS   PD   LG  ++ +      +      +F  ++ ++EKEI  RN      
Sbjct: 437 MAISWHLSRRQPDMVPLGHHKEKYF--SGPKPKAVLNQFRTDLEKLEKEITARNEQLD-- 492

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVS 91
                   PYE L PS         + NSV+
Sbjct: 493 -------WPYEYLKPSC--------IENSVT 508

>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Length = 573

 Score = 73.7 bits (180), Expect = 4e-17
 Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 19/92 (20%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           M++   L    P    LG+ ++ +             +F  E+  ++K+IE RN+  +  
Sbjct: 501 MSITWQLGRCQPTMVALGQHEEEYFS--GPGPKAVLTKFREELAALDKDIEVRNAKLA-- 556

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
                  LPYE L PS         V NSV+I
Sbjct: 557 -------LPYEYLRPSR--------VENSVAI 573

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	92
2iuk_A	864	SEED lipoxygenase; iron, dioxygenase, metal-bindin	100.0
2iuj_A	853	Lipoxygenase L-5; dioxygenase, metal-binding, oxid	100.0
1f8n_A	839	Lipoxygenase-1; dioxygenase, metalloprotein, fatty	100.0
3d3l_A	541	Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir	99.88
1lox_A	662	15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot	99.88
3rde_A	573	Arachidonate 12-lipoxygenase, 12S-type; C-terminal	99.87
3v98_A	691	Arachidonate 5-lipoxygenase; dioxygenase, oxidored	99.86
3vf1_A	698	11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik	99.86
3fg1_A	696	Allene oxide synthase-lipoxygenase protein; arichi	99.86
3dy5_A	1066	Allene oxide synthase-lipoxygenase protein; fusion	99.84

>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max}

Probab=100.00  E-value=2.3e-34  Score=245.28  Aligned_cols=91  Identities=53%  Similarity=0.841  Sum_probs=89.0

Q ss_pred             CchhhccCCCCCCccCcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCcCCceeeccCCCCC
Q 034507            1 MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRRNRCGAGVLPYELLVPSSEPG   80 (92)
Q Consensus         1 m~~~~~LS~h~~dE~yLG~~~~~~~w~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~knr~g~~~~PY~~L~P~~~~g   80 (92)
                      |+++++||+|++||+|||+|+++. ||+|+++++||++|+++|++||+.|++||+++++|||+||+++||+||+|++++|
T Consensus       774 m~l~~lLS~h~~de~yLG~~~~~~-~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~lknR~g~~~lPY~yL~P~s~~g  852 (864)
T 2iuk_A          774 LSVIEILSRHASDEIYLGERETPN-WTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSSEEG  852 (864)
T ss_dssp             HHHHHHHTCCCSSCCBTTCCSCTT-SCSCHHHHHHHHHHHHHHHHHHHHHHHHSSCTTCGGGTGGGTCCCCTTCSCCCSS
T ss_pred             HHHHHHHhcCCCCcccccccCccc-cccCHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCCCCCCceeeCCCCCCC
Confidence            578999999999999999999878 9999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCccccccC
Q 034507           81 VTCKGVPNSVSI   92 (92)
Q Consensus        81 ~t~~gIPnSIsI   92 (92)
                      ||||||||||||
T Consensus       853 ~t~~~IPNSIsI  864 (864)
T 2iuk_A          853 LTFKGIPNSISI  864 (864)
T ss_dssp             SCSCCCBSSCCC
T ss_pred             cccCCCCCcccC
Confidence            999999999998

>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max}

Probab=100.00  E-value=2.8e-34  Score=244.65  Aligned_cols=91  Identities=44%  Similarity=0.813  Sum_probs=88.9

Q ss_pred             CchhhccCCCCCCccCcccccCC-CCCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCcCCceeeccCCCC
Q 034507            1 MAVVDTLSTHSPDEEYLGERQQP-WIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRRNRCGAGVLPYELLVPSSEP   79 (92)
Q Consensus         1 m~~~~~LS~h~~dE~yLG~~~~~-~~w~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~knr~g~~~~PY~~L~P~~~~   79 (92)
                      |+++|+||+|++||+|||+|+++ + ||+|+++++||++|+++|++||+.|++||+++++|||+||+++||+||+|++++
T Consensus       762 m~l~~lLS~~~~de~yLG~~~~~~~-~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~P~s~~  840 (853)
T 2iuj_A          762 LTIIEILSRHASDEFYLGQRDGGDY-WTSDAGPLEAFKRFGKNLEEIEKKLIEKNNDETLRNRYGPAKMPYTLLYPSSEE  840 (853)
T ss_dssp             HHHHHHTTCBCTTCCBTTTCSSCTT-SCSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCGGGTTTTTCCCCTTCSCCCS
T ss_pred             HHHHHHHcCCCCCcccccccCcccc-cccCHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCCCCCCceeeCCCCCC
Confidence            57899999999999999999987 7 999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccCCccccccC
Q 034507           80 GVTCKGVPNSVSI   92 (92)
Q Consensus        80 g~t~~gIPnSIsI   92 (92)
                      |||||||||||||
T Consensus       841 g~t~~~IPNSIsI  853 (853)
T 2iuj_A          841 GLTFRGIPNSISI  853 (853)
T ss_dssp             BSCSCCCBSSCCC
T ss_pred             CcccCCCCCcccC
Confidence            9999999999998

>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ...

Probab=100.00  E-value=7.2e-34  Score=241.84  Aligned_cols=91  Identities=48%  Similarity=0.883  Sum_probs=88.9

Q ss_pred             CchhhccCCCCCCccCcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-cccCCCcCCceeeccCCCC
Q 034507            1 MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR-NRCGAGVLPYELLVPSSEP   79 (92)
Q Consensus         1 m~~~~~LS~h~~dE~yLG~~~~~~~w~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~k-nr~g~~~~PY~~L~P~~~~   79 (92)
                      |+++++||+|++||+|||+|++++ ||+|+++++||++|+++|++||+.|++||+++++| ||+||+++||+||+|++++
T Consensus       748 m~l~~lLS~~~~de~yLG~~~~~~-~~~d~~~~~a~~rF~~~L~~Ie~~I~~RN~d~~lk~nr~g~~~~PY~~L~P~s~~  826 (839)
T 1f8n_A          748 LSVIEILSTHASDEVYLGQRDNPH-WTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEE  826 (839)
T ss_dssp             HHHHHHHTCBCTTCCBTTCCSCTT-SCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHTTTTTCCCCTTCSCCCS
T ss_pred             HHHHHHHhcCCCCcccccccCccc-cccCHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhccCCCCCCCceeeCCCCCC
Confidence            578999999999999999999878 99999999999999999999999999999999999 9999999999999999999


Q ss_pred             CcccCCccccccC
Q 034507           80 GVTCKGVPNSVSI   92 (92)
Q Consensus        80 g~t~~gIPnSIsI   92 (92)
                      |||||||||||||
T Consensus       827 g~t~~~IPNSIsI  839 (839)
T 1f8n_A          827 GLTFRGIPNSISI  839 (839)
T ss_dssp             BSCSCCCBSSCCC
T ss_pred             CcccCCCCCccCC
Confidence            9999999999998

>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens}

Probab=99.88  E-value=8.2e-24  Score=173.56  Aligned_cols=73  Identities=33%  Similarity=0.493  Sum_probs=65.6

Q ss_pred             CchhhccCCCCCCccCcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCcCCceeeccCCCCC
Q 034507            1 MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRRNRCGAGVLPYELLVPSSEPG   80 (92)
Q Consensus         1 m~~~~~LS~h~~dE~yLG~~~~~~~w~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~knr~g~~~~PY~~L~P~~~~g   80 (92)
                      |+++++||+|++||+|||+|++ . ||+|+++++||++|+++|++||++|++||++++         +||+||+|+.   
T Consensus       437 ~~~~~~LS~~~~de~~LG~y~~-~-~f~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~---------~PY~~L~P~~---  502 (541)
T 3d3l_A          437 MAISWHLSRRQPDMVPLGHHKE-K-YFSGPKPKAVLNQFRTDLEKLEKEITARNEQLD---------WPYEYLKPSC---  502 (541)
T ss_dssp             HHHHHHHC----CCCBTTCCCC-C-SCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTCS---------SCCCSCCGGG---
T ss_pred             HHHHHHhccCCCCCcccccCCc-c-cccChHHHHHHHHHHHHHHHHHHHHHHHcCCCC---------CCCceECCCC---
Confidence            5789999999999999999988 7 999999999999999999999999999999998         9999999998   


Q ss_pred             cccCCccccccC
Q 034507           81 VTCKGVPNSVSI   92 (92)
Q Consensus        81 ~t~~gIPnSIsI   92 (92)
                           |||||||
T Consensus       503 -----IpnSIsI  509 (541)
T 3d3l_A          503 -----IENSVTS  509 (541)
T ss_dssp             -----SBSSCC-
T ss_pred             -----CCcEEEE
Confidence                 9999998

>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A*

Probab=99.88  E-value=2.4e-23  Score=173.67  Aligned_cols=73  Identities=37%  Similarity=0.492  Sum_probs=68.6

Q ss_pred             CchhhccCCCCCCccCcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCcCCceeeccCCCCC
Q 034507            1 MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRRNRCGAGVLPYELLVPSSEPG   80 (92)
Q Consensus         1 m~~~~~LS~h~~dE~yLG~~~~~~~w~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~knr~g~~~~PY~~L~P~~~~g   80 (92)
                      |+++++||+|++||+|||+|++ . ||+|+++++||++|+++|++||++|++||++++         +||+||+|+.   
T Consensus       590 ~~~~~~LS~~~~de~~LG~~~~-~-~~~d~~~~~a~~~F~~~L~~ie~~I~~rN~~~~---------~PY~~L~P~~---  655 (662)
T 1lox_A          590 MSIVWQLGRDQPIMVPLGQHQE-E-YFSGPEPRAVLEKFREELAIMDKEIEVRNEKLD---------IPYEYLRPSI---  655 (662)
T ss_dssp             HHHHHHTT--CCCCCBTTCCCC-C-CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTSS---------SCCCTTCTTT---
T ss_pred             HHHHHHhccCCCCccccccCCc-c-cccCHHHHHHHHHHHHHHHHHHHHHHHHcCCCC---------CCceeECCCC---
Confidence            5789999999999999999987 7 999999999999999999999999999999998         9999999998   


Q ss_pred             cccCCccccccC
Q 034507           81 VTCKGVPNSVSI   92 (92)
Q Consensus        81 ~t~~gIPnSIsI   92 (92)
                           |||||||
T Consensus       656 -----ipnSisI  662 (662)
T 1lox_A          656 -----VENSVAI  662 (662)
T ss_dssp             -----SBSSCCC
T ss_pred             -----CCccccC
Confidence                 9999998

>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa}

Probab=99.87  E-value=2.7e-23  Score=171.45  Aligned_cols=73  Identities=33%  Similarity=0.500  Sum_probs=70.1

Q ss_pred             CchhhccCCCCCCccCcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCcCCceeeccCCCCC
Q 034507            1 MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRRNRCGAGVLPYELLVPSSEPG   80 (92)
Q Consensus         1 m~~~~~LS~h~~dE~yLG~~~~~~~w~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~knr~g~~~~PY~~L~P~~~~g   80 (92)
                      |+++++||+|++||+|||+|++ . ||+|+++++|+++|+++|++||++|++||++++         +||+||+|+.   
T Consensus       501 ~~~~~~LS~~~~de~~LG~y~~-~-~f~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~---------~PY~~L~P~~---  566 (573)
T 3rde_A          501 MSITWQLGRCQPTMVALGQHEE-E-YFSGPGPKAVLTKFREELAALDKDIEVRNAKLA---------LPYEYLRPSR---  566 (573)
T ss_dssp             HHHHHHHHSCCTTCCBTTCCCC-C-CSCSHHHHHHHHHHHHHHHHHHHHHHHHHHTSS---------SCCCTTCTTT---
T ss_pred             HHHHHHhcCCCCCCcccccCCc-c-ccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---------CCcccCCCCC---
Confidence            5789999999999999999987 6 899999999999999999999999999999987         9999999998   


Q ss_pred             cccCCccccccC
Q 034507           81 VTCKGVPNSVSI   92 (92)
Q Consensus        81 ~t~~gIPnSIsI   92 (92)
                           |||||||
T Consensus       567 -----IpnSIsI  573 (573)
T 3rde_A          567 -----VENSVAI  573 (573)
T ss_dssp             -----SBSSCCC
T ss_pred             -----CCCcccC
Confidence                 9999998

>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B

Probab=99.86  E-value=1.2e-22  Score=170.28  Aligned_cols=73  Identities=32%  Similarity=0.439  Sum_probs=70.0

Q ss_pred             CchhhccCCCCCCccCcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCcCCceeeccCCCCC
Q 034507            1 MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRRNRCGAGVLPYELLVPSSEPG   80 (92)
Q Consensus         1 m~~~~~LS~h~~dE~yLG~~~~~~~w~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~knr~g~~~~PY~~L~P~~~~g   80 (92)
                      |+++++||+|++||+|||+|++ . ||+|+++++|+++|+++|++||++|++||++++         +||+||+|+.   
T Consensus       619 ~~~~~~LS~~~~de~~LG~y~~-~-~f~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~---------~PY~~L~P~~---  684 (691)
T 3v98_A          619 LGAVWALSQFQENELFLGMYPE-E-HFIEKPVKEAMARFRKNLEAIVSVIAERNENLQ---------LPYYYLDPDR---  684 (691)
T ss_dssp             HHHHHHHTCCCTTCCBTTCCCS-C-SCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCS---------SCCCTTCGGG---
T ss_pred             HHHHHHhcCCCCCCcccccCCc-c-ccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---------CCcccCCCCC---
Confidence            5789999999999999999987 6 889999999999999999999999999999987         9999999998   


Q ss_pred             cccCCccccccC
Q 034507           81 VTCKGVPNSVSI   92 (92)
Q Consensus        81 ~t~~gIPnSIsI   92 (92)
                           |||||||
T Consensus       685 -----IpnSIsI  691 (691)
T 3v98_A          685 -----IPNSVAI  691 (691)
T ss_dssp             -----CBSSCCC
T ss_pred             -----CCceeeC
Confidence                 9999998

>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa}

Probab=99.86  E-value=1.6e-22  Score=169.54  Aligned_cols=73  Identities=36%  Similarity=0.626  Sum_probs=69.3

Q ss_pred             CchhhccCCCCCCccCcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCcCCceeeccCCCCC
Q 034507            1 MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRRNRCGAGVLPYELLVPSSEPG   80 (92)
Q Consensus         1 m~~~~~LS~h~~dE~yLG~~~~~~~w~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~knr~g~~~~PY~~L~P~~~~g   80 (92)
                      |+++++||+|++||+|||+|++ . ||+|+++++|+++|+++|++||++|++||++++         +||+||+|+.   
T Consensus       626 ~~~~~~LS~~~~de~~LG~y~~-~-~~~~~~~~~a~~~F~~~L~~ie~~I~~RN~~~~---------~PY~~L~P~~---  691 (698)
T 3vf1_A          626 VSVVNALTTIYPTEKFLGDYAD-N-LFGDAAAHAAMAKFKSNLANITKQITERNQGMV---------SPYTWLIPGH---  691 (698)
T ss_dssp             HHHHHHHTCCCTTCCBTTCCTT-C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCS---------SCCCTTCGGG---
T ss_pred             HHHHHHhcCCCCCCcccccCCc-c-ccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---------CCcccCCCCC---
Confidence            5789999999999999999987 5 677999999999999999999999999999987         9999999998   


Q ss_pred             cccCCccccccC
Q 034507           81 VTCKGVPNSVSI   92 (92)
Q Consensus        81 ~t~~gIPnSIsI   92 (92)
                           |||||||
T Consensus       692 -----IpnSIsI  698 (698)
T 3vf1_A          692 -----VPNSIAI  698 (698)
T ss_dssp             -----SBSSCCC
T ss_pred             -----CCCeeeC
Confidence                 9999998

>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A

Probab=99.86  E-value=1.9e-22  Score=169.13  Aligned_cols=73  Identities=33%  Similarity=0.533  Sum_probs=69.3

Q ss_pred             CchhhccCCCCCCccCcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCcCCceeeccCCCCC
Q 034507            1 MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRRNRCGAGVLPYELLVPSSEPG   80 (92)
Q Consensus         1 m~~~~~LS~h~~dE~yLG~~~~~~~w~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~knr~g~~~~PY~~L~P~~~~g   80 (92)
                      |+++++||+|++||+|||+|++ . ||+|+++++|+++|+++|++||++|++||++++         +||+||+|+.   
T Consensus       624 ~~~~~~LS~~~~de~~LG~y~~-~-~~~~~~~~~a~~~F~~~L~~ie~~I~~RN~~~~---------~PY~~L~P~~---  689 (696)
T 3fg1_A          624 IATVYILTKFSEDERYLGNYSA-T-AWEDKDALDAINRFQDKLEDISKKIKQRNENLE---------VPYIYLLPER---  689 (696)
T ss_dssp             HHHHHHHTCCCTTCCBTTCCTT-C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCS---------SCCCTTCGGG---
T ss_pred             HHHHHHhcCCCCCccccccCCc-c-ccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---------CCcccCCCCC---
Confidence            5789999999999999999987 5 677899999999999999999999999999987         9999999998   


Q ss_pred             cccCCccccccC
Q 034507           81 VTCKGVPNSVSI   92 (92)
Q Consensus        81 ~t~~gIPnSIsI   92 (92)
                           |||||||
T Consensus       690 -----IpnSIsI  696 (696)
T 3fg1_A          690 -----IPNGTAI  696 (696)
T ss_dssp             -----SBSSCCC
T ss_pred             -----CCceeeC
Confidence                 9999998

>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla}

Probab=99.84  E-value=1.7e-21  Score=169.15  Aligned_cols=73  Identities=33%  Similarity=0.533  Sum_probs=69.3

Q ss_pred             CchhhccCCCCCCccCcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCcCCceeeccCCCCC
Q 034507            1 MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRRNRCGAGVLPYELLVPSSEPG   80 (92)
Q Consensus         1 m~~~~~LS~h~~dE~yLG~~~~~~~w~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~knr~g~~~~PY~~L~P~~~~g   80 (92)
                      |+++++||+|++||+|||+|++ . ||+|+++++|+++|+++|++||++|++||++.+         +||+||+|+.   
T Consensus       994 ~~~~~~LS~~~~de~~Lg~y~~-~-~~~d~~~~~a~~~F~~~L~~i~~~I~~RN~~~~---------~pY~~L~P~~--- 1059 (1066)
T 3dy5_A          994 IATVYILTKFSEDERYLGNYSA-T-AWEDKDALDAINRFQDKLEDISKKIKQRNENLE---------VPYIYLLPER--- 1059 (1066)
T ss_dssp             HHHHHHHTCCCTTCCBTTCCTT-S-CCCSHHHHHHHHHHHHHHHHHHHHHHHHTTSCS---------SCCCTTSTTS---
T ss_pred             HHHHHHhcCCCCCccccccCCc-c-ccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---------CCcccCCCCC---
Confidence            5789999999999999999987 5 677999999999999999999999999999987         9999999998   


Q ss_pred             cccCCccccccC
Q 034507           81 VTCKGVPNSVSI   92 (92)
Q Consensus        81 ~t~~gIPnSIsI   92 (92)
                           |||||||
T Consensus      1060 -----IpnSIsI 1066 (1066)
T 3dy5_A         1060 -----IPNGTAI 1066 (1066)
T ss_dssp             -----CBSSCCC
T ss_pred             -----CCceeeC
Confidence                 9999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	92
d3bnea1	690	a.119.1.1 (A:150-839) Lipoxigenase, C-terminal dom	9e-35
d2p0ma1	551	a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Ory	3e-23

>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 690

class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Plant lipoxigenases
domain: Lipoxigenase, C-terminal domain
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

 Score =  122 bits (307), Expect = 9e-35
 Identities = 44/93 (47%), Positives = 66/93 (70%), Gaps = 2/93 (2%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPS-R 59
           ++V++ LSTH+ DE YLG+R  P  W+ D +  +AF +F  ++  IE+++ +RN+DPS +
Sbjct: 599 LSVIEILSTHASDEVYLGQRDNPH-WTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQ 657

Query: 60  RNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
            NR G   LPY LL PSSE G+T +G+PNS+SI
Sbjct: 658 GNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 690

>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 551

class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Animal lipoxigenases
domain: 15-Lipoxygenase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 89.3 bits (221), Expect = 3e-23
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 19/92 (20%)

Query: 1   MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR 60
           M++V  L    P    LG+ Q+ +      E      +F  E+  ++KEIE RN      
Sbjct: 479 MSIVWQLGRDQPIMVPLGQHQEEYFS--GPEPRAVLEKFREELAIMDKEIEVRNEKLD-- 534

Query: 61  NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 92
                  +PYE L PS         V NSV+I
Sbjct: 535 -------IPYEYLRPSI--------VENSVAI 551

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	92
d3bnea1	690	Lipoxigenase, C-terminal domain {Soybean (Glycine	100.0
d2p0ma1	551	15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T	99.87

>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]}

class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Plant lipoxigenases
domain: Lipoxigenase, C-terminal domain
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

Probab=100.00  E-value=3e-34  Score=238.40  Aligned_cols=91  Identities=48%  Similarity=0.883  Sum_probs=88.8

Q ss_pred             CchhhccCCCCCCccCcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-cccCCCcCCceeeccCCCC
Q 034507            1 MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRR-NRCGAGVLPYELLVPSSEP   79 (92)
Q Consensus         1 m~~~~~LS~h~~dE~yLG~~~~~~~w~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~k-nr~g~~~~PY~~L~P~~~~   79 (92)
                      |+++++||+|++||+|||+|+++. |+.|+++++||++|+++|++||++|++||+++++| ||.||+++||+||+|++++
T Consensus       599 ~~~~~~LS~~~~de~yLG~~~~~~-~~~D~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~~~~nr~g~~~~PY~~L~Ps~~~  677 (690)
T d3bnea1         599 LSVIEILSTHASDEVYLGQRDNPH-WTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEE  677 (690)
T ss_dssp             HHHHHHHTCBCTTCCBTTCCSCTT-SCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHTTTTTCCCCTTCSCCCS
T ss_pred             HHHHHHhccCCCCcccCCCCCCcc-cccChHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccCCCCCCCccccCCCCCC
Confidence            578999999999999999999878 99999999999999999999999999999999999 9999999999999999999


Q ss_pred             CcccCCccccccC
Q 034507           80 GVTCKGVPNSVSI   92 (92)
Q Consensus        80 g~t~~gIPnSIsI   92 (92)
                      |||||||||||||
T Consensus       678 g~t~~gIPnSIsI  690 (690)
T d3bnea1         678 GLTFRGIPNSISI  690 (690)
T ss_dssp             BSCSCCCBSSCCC
T ss_pred             CcCcCCCCCcccC
Confidence            9999999999998

>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Animal lipoxigenases
domain: 15-Lipoxygenase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.87  E-value=2.5e-23  Score=168.68  Aligned_cols=73  Identities=37%  Similarity=0.492  Sum_probs=70.6

Q ss_pred             CchhhccCCCCCCccCcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCcCCceeeccCCCCC
Q 034507            1 MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAEIGRIEKEIEKRNSDPSRRNRCGAGVLPYELLVPSSEPG   80 (92)
Q Consensus         1 m~~~~~LS~h~~dE~yLG~~~~~~~w~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~knr~g~~~~PY~~L~P~~~~g   80 (92)
                      |+++++||+|++||+|||+|.+ . ||.|+++++|+++|+++|++|++.|++||++++         +||+||+|++   
T Consensus       479 ~~~~~~Ls~~~~d~~~LG~~~~-~-~~~d~~~~~a~~~F~~~L~~i~~~I~~RN~~~~---------~PY~yL~P~~---  544 (551)
T d2p0ma1         479 MSIVWQLGRDQPIMVPLGQHQE-E-YFSGPEPRAVLEKFREELAIMDKEIEVRNEKLD---------IPYEYLRPSI---  544 (551)
T ss_dssp             HHHHHHHSCCCSSCCBTTCCCC-C-CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---------SCCCTTCTTT---
T ss_pred             HHHHHHHhcCCCccccccCCch-h-hccChHHHHHHHHHHHHHHHHHHHHHHHcCCCC---------CCccCcCCCC---
Confidence            5789999999999999999988 7 999999999999999999999999999999988         9999999999   


Q ss_pred             cccCCccccccC
Q 034507           81 VTCKGVPNSVSI   92 (92)
Q Consensus        81 ~t~~gIPnSIsI   92 (92)
                           |||||||
T Consensus       545 -----IpnSIsI  551 (551)
T d2p0ma1         545 -----VENSVAI  551 (551)
T ss_dssp             -----SBSSCCC
T ss_pred             -----CCCcccC
Confidence                 9999998