Citrus Sinensis ID: 034629

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------9
Protein Sequence
MEKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARERAEKDLGEESRLSALWEKRAREHGWKDDS
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
MEKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARERAEKDLGEESRLSALWEKRArehgwkdds
Flexible Loop (DISEMBL)
MEKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARERaekdlgeesrlsalwekrarehgwkdds
Low Complexity Region (SEG)
MEKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARERAEKDLGEESRLSALWEKRAREHGWKDDS
Disordered region (IsUnstruct)
*****************************************************************************************
Disordered Region (DISOPRED)
***DTVA*LSEELA***************LIMDARK************T***E*************GEESRLSALWEKRA**H******
Disordered Region (DISEMBL)
MEKDTVALLSEELALQKSVANETLQRSKELIMD***************TAGIETCEE**********EESRLSALWEKR**********
Disordered Region (DISPRO)
**KDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARERAEKDLGEESRLSALWEKRAREH******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGxxxxxxxxxxxxxxxxxxxxxSALWEKRAREHGWKDDS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	89
351721502	180	uncharacterized protein LOC100306127 [Gl	0.955	0.472	0.694	6e-22
124361047	111	hypothetical protein MtrDRAFT_AC172101g2	0.977	0.783	0.643	3e-21
357512073	194	hypothetical protein MTR_7g113900 [Medic	0.977	0.448	0.643	4e-21
255542532	184	conserved hypothetical protein [Ricinus	0.977	0.472	0.666	1e-20
356505886	180	PREDICTED: uncharacterized protein LOC10	0.955	0.472	0.658	1e-20
116778924	214	unknown [Picea sitchensis]	0.988	0.411	0.590	2e-20
356515296	857	PREDICTED: cellulose synthase-like prote	0.966	0.100	0.534	2e-20
116784909	176	unknown [Picea sitchensis]	0.977	0.494	0.563	2e-19
224131470	173	predicted protein [Populus trichocarpa]	0.988	0.508	0.534	5e-19
224125354	194	predicted protein [Populus trichocarpa]	0.988	0.453	0.545	2e-18

>gi|351721502|ref|NP_001237979.1| uncharacterized protein LOC100306127 [Glycine max] gi|255627629|gb|ACU14159.1| unknown [Glycine max]

 Score =  108 bits (269), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 59/85 (69%), Positives = 70/85 (82%)

Query: 1   MEKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARE 60
           M K  + +LSEEL LQK VANETL+ +K+LIMDARK  SHYQ+EAEKC  G+ETCEEARE
Sbjct: 94  MNKGILKMLSEELNLQKIVANETLEHTKQLIMDARKTFSHYQKEAEKCNIGVETCEEARE 153

Query: 61  RAEKDLGEESRLSALWEKRAREHGW 85
           RAE +L EE +L+ALWE RARE+GW
Sbjct: 154 RAEAELIEEHKLTALWENRAREYGW 178

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|124361047|gb|ABN09019.1| hypothetical protein MtrDRAFT_AC172101g21v1 [Medicago truncatula]

 Score =  105 bits (262), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/87 (64%), Positives = 74/87 (85%)

Query: 1   MEKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARE 60
           M KD +++LSEEL LQK VANETL+++K L+++AR   SHY++E EKC+ G+ETCEEARE
Sbjct: 23  MNKDPLSMLSEELKLQKIVANETLEQTKRLVINARNTFSHYKKEVEKCSIGMETCEEARE 82

Query: 61  RAEKDLGEESRLSALWEKRAREHGWKD 87
           RAE +L EE RL+ALWE+RAR++GWKD
Sbjct: 83  RAEAELVEERRLTALWEERARDYGWKD 109

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357512073|ref|XP_003626325.1| hypothetical protein MTR_7g113900 [Medicago truncatula] gi|355501340|gb|AES82543.1| hypothetical protein MTR_7g113900 [Medicago truncatula]

 Score =  105 bits (262), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 56/87 (64%), Positives = 74/87 (85%)

Query: 1   MEKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARE 60
           M KD +++LSEEL LQK VANETL+++K L+++AR   SHY++E EKC+ G+ETCEEARE
Sbjct: 106 MNKDPLSMLSEELKLQKIVANETLEQTKRLVINARNTFSHYKKEVEKCSIGMETCEEARE 165

Query: 61  RAEKDLGEESRLSALWEKRAREHGWKD 87
           RAE +L EE RL+ALWE+RAR++GWKD
Sbjct: 166 RAEAELVEERRLTALWEERARDYGWKD 192

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542532|ref|XP_002512329.1| conserved hypothetical protein [Ricinus communis] gi|223548290|gb|EEF49781.1| conserved hypothetical protein [Ricinus communis]

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/87 (66%), Positives = 73/87 (83%)

Query: 1   MEKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARE 60
           M KD +ALLSEE+ALQ+ VAN++L+ ++ L+MD++ AS HYQ+EAEKC A  ETCEEARE
Sbjct: 77  MRKDIIALLSEEIALQRRVANDSLEHTRTLVMDSKTASLHYQKEAEKCNAQTETCEEARE 136

Query: 61  RAEKDLGEESRLSALWEKRAREHGWKD 87
           RAE +L EE +LSALWEKRARE GW+D
Sbjct: 137 RAEAELVEEYKLSALWEKRARELGWED 163

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505886|ref|XP_003521720.1| PREDICTED: uncharacterized protein LOC100779008 [Glycine max]

 Score =  103 bits (257), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/85 (65%), Positives = 68/85 (80%)

Query: 1   MEKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARE 60
           M K  + +LSEEL LQK VANET++ +K+LIMDARK  SHYQ+EAEKC  G+ETCEEARE
Sbjct: 94  MNKGLLTMLSEELNLQKIVANETMEHTKQLIMDARKTFSHYQKEAEKCNIGVETCEEARE 153

Query: 61  RAEKDLGEESRLSALWEKRAREHGW 85
           RAE +L EE +L+ LWE RA E+GW
Sbjct: 154 RAEAELIEEHKLTTLWENRASEYGW 178

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116778924|gb|ABK21058.1| unknown [Picea sitchensis]

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/88 (59%), Positives = 69/88 (78%)

Query: 1   MEKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARE 60
           MEK+   LL+EEL LQ++V  E  QR+   +++A+K +S YQ+EAEKCTAG+ETCEEARE
Sbjct: 89  MEKNYTDLLAEELKLQETVTVENQQRADMALLEAKKLASQYQKEAEKCTAGMETCEEARE 148

Query: 61  RAEKDLGEESRLSALWEKRAREHGWKDD 88
           RAE  L  E +LS+LWE+RAR+ GWK+D
Sbjct: 149 RAEATLRAEKKLSSLWEQRARQLGWKED 176

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515296|ref|XP_003526337.1| PREDICTED: cellulose synthase-like protein H1-like [Glycine max]

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/86 (53%), Positives = 65/86 (75%)

Query: 2   EKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARER 61
           EK+   LL+EEL LQ+S A E  QR+   +++A+K +S YQ+EA+KC +G+ETCEEARE+
Sbjct: 756 EKNFAELLTEELKLQESQAVENQQRADMALLEAKKIASQYQKEADKCNSGMETCEEAREK 815

Query: 62  AEKDLGEESRLSALWEKRAREHGWKD 87
           AE  L  + +L+ALWE RAR+ GWK+
Sbjct: 816 AELTLVTQKKLTALWELRARQKGWKE 841

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116784909|gb|ABK23516.1| unknown [Picea sitchensis]

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/87 (56%), Positives = 65/87 (74%)

Query: 1   MEKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARE 60
           MEK+   LLSEEL LQ++VA E  + S   ++DA++ +S YQ+EAEKC AG+ETCE ARE
Sbjct: 89  MEKNFTDLLSEELRLQQTVAEENREHSVMTLLDAKRLASQYQKEAEKCNAGMETCEGARE 148

Query: 61  RAEKDLGEESRLSALWEKRAREHGWKD 87
           RA+  L  E +LS +WE+RAR+ GWKD
Sbjct: 149 RAQASLLAEKKLSVIWEQRARQMGWKD 175

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131470|ref|XP_002328547.1| predicted protein [Populus trichocarpa] gi|222838262|gb|EEE76627.1| predicted protein [Populus trichocarpa]

 Score = 98.2 bits (243), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 47/88 (53%), Positives = 68/88 (77%)

Query: 1   MEKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARE 60
           M+K+ V L+S+E+ LQ+ VANE L++++ L++ AR  SS YQ EA+KC+A  +TCEE RE
Sbjct: 84  MQKNAVDLISDEIELQRRVANERLEQTRTLVITARSTSSQYQIEAQKCSAHTQTCEEGRE 143

Query: 61  RAEKDLGEESRLSALWEKRAREHGWKDD 88
           RAE  L EE +L+ALWE+RA E GW+++
Sbjct: 144 RAEAGLVEERKLTALWEQRALELGWREN 171

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125354|ref|XP_002319565.1| predicted protein [Populus trichocarpa] gi|222857941|gb|EEE95488.1| predicted protein [Populus trichocarpa]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/88 (54%), Positives = 63/88 (71%)

Query: 1   MEKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARE 60
           M K    L+SEE+ LQK VANETL++++ L+  AR+ S  YQ EA+KC+A  ETCE  RE
Sbjct: 84  MNKGVADLISEEIDLQKRVANETLEQTRNLVTTARRISLQYQTEAQKCSAHTETCEAGRE 143

Query: 61  RAEKDLGEESRLSALWEKRAREHGWKDD 88
           RAE  L EE +L+ALWE+RA E GW ++
Sbjct: 144 RAEAGLVEERKLTALWEQRALELGWGEN 171

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	89
TAIR|locus:2134837	176	AT4G04360 "AT4G04360" [Arabido	0.966	0.488	0.5	4e-19
TAIR|locus:505006538	172	NKS1 "AT4G30996" [Arabidopsis	0.988	0.511	0.5	6.5e-19
TAIR|locus:2205543	184	AT1G05070 "AT1G05070" [Arabido	0.988	0.478	0.465	1.1e-18
TAIR|locus:2060268	183	AT2G32580 "AT2G32580" [Arabido	0.966	0.469	0.476	2.2e-18
TAIR|locus:2061027	173	AT2G24290 "AT2G24290" [Arabido	0.988	0.508	0.477	1.2e-17

TAIR|locus:2134837 AT4G04360 "AT4G04360" [Arabidopsis thaliana (taxid:3702)]

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 43/86 (50%), Positives = 63/86 (73%)

Query:     2 EKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARER 61
             E     +++EEL L+++ A E   R+  L++DA+KA+S YQ+EA+KC+ G+ETCE ARE+
Sbjct:    83 ESSFTEMVAEELKLREAQAQEDEWRADRLLLDAKKAASQYQKEADKCSMGMETCELAREK 142

Query:    62 AEKDLGEESRLSALWEKRAREHGWKD 87
             AE  L E+ RLS +WE RAR+ GWK+
Sbjct:   143 AEAALDEQRRLSYMWELRARQGGWKE 168

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006538 NKS1 "AT4G30996" [Arabidopsis thaliana (taxid:3702)]

 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 44/88 (50%), Positives = 63/88 (71%)

Query:     1 MEKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARE 60
             MEK  V LL+EEL LQ++VA+E  +     + +A++ +S YQ+EAEKC A  E CE ARE
Sbjct:    85 MEKQFVDLLTEELKLQEAVADEHSRHMNVTLAEAKRVASQYQKEAEKCNAATEICESARE 144

Query:    61 RAEKDLGEESRLSALWEKRAREHGWKDD 88
             RAE  L +E ++++LWEKRAR+ GW+ +
Sbjct:   145 RAEALLIKERKITSLWEKRARQSGWEGE 172

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0042538 "hyperosmotic salinity response" evidence=IMP

GO:0043182 "vacuolar sequestering of sodium ion" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2205543 AT1G05070 "AT1G05070" [Arabidopsis thaliana (taxid:3702)]

 Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 41/88 (46%), Positives = 67/88 (76%)

Query:     2 EKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARER 61
             EK+   LL+EEL L+++ + E  +R+   +++A+K +S YQ+EA+KC +G+ETCEEARE+
Sbjct:    83 EKNYAELLTEELKLREAESLEKHKRADMGLLEAKKVTSSYQKEADKCNSGMETCEEAREK 142

Query:    62 AEKDLGEESRLSALWEKRAREHGWKDDS 89
             AE  L E+ +L++ WE+RAR+ GW++ S
Sbjct:   143 AELALAEQKKLTSRWEERARQKGWREGS 170

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0009616 "virus induced gene silencing" evidence=RCA

GO:0010050 "vegetative phase change" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2060268 AT2G32580 "AT2G32580" [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 41/86 (47%), Positives = 66/86 (76%)

Query:     2 EKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARER 61
             EK+   LL+EEL  +++ + E  +R    +++A+K +S YQ+EA+KC +G+ETCEEARE+
Sbjct:    82 EKNYAELLTEELKQREAASMEKHKRVDTGLLEAKKITSSYQKEADKCNSGMETCEEAREK 141

Query:    62 AEKDLGEESRLSALWEKRAREHGWKD 87
             AEK L E+ +L+++WE+RAR+ G+KD
Sbjct:   142 AEKALVEQKKLTSMWEQRARQKGYKD 167

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2061027 AT2G24290 "AT2G24290" [Arabidopsis thaliana (taxid:3702)]

 Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 42/88 (47%), Positives = 62/88 (70%)

Query:     1 MEKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARE 60
             MEK  V LL+EEL LQ++VA+E  +     + +A++ +S YQ+EAEKC A  E CE ARE
Sbjct:    86 MEKPFVDLLTEELKLQEAVADEHSRHMNVTLAEAKRVASQYQKEAEKCNAATEICESARE 145

Query:    61 RAEKDLGEESRLSALWEKRAREHGWKDD 88
             RA+  L +E +++ LWE+RAR+ GW+ +
Sbjct:   146 RAQALLLKERKITFLWERRARQLGWEGE 173


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.307   0.121   0.328    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       89        89   0.00091  102 3  11 23  0.40    30
                                                     29  0.50    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  519 (55 KB)
  Total size of DFA:  106 KB (2073 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.33u 0.11s 12.44t   Elapsed:  00:00:00
  Total cpu time:  12.33u 0.11s 12.44t   Elapsed:  00:00:00
  Start:  Thu May  9 21:38:10 2013   End:  Thu May  9 21:38:10 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	89
pfam06364	176	pfam06364, DUF1068, Protein of unknown function (D	9e-21

>gnl|CDD|115046 pfam06364, DUF1068, Protein of unknown function (DUF1068)

 Score = 80.5 bits (198), Expect = 9e-21
 Identities = 41/88 (46%), Positives = 67/88 (76%)

Query: 2   EKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARER 61
           EK+   LL+EEL  +++ + E  +R+   +++A+K +S YQ+EA+KC +G+ETCEEARE+
Sbjct: 83  EKNYAELLTEELKQREAESTEKHKRADVGLLEAKKLTSSYQKEADKCNSGMETCEEAREK 142

Query: 62  AEKDLGEESRLSALWEKRAREHGWKDDS 89
           AE+ L E+ +L++LWE+RAR+ GWK  +
Sbjct: 143 AEEALVEQKKLTSLWEERARQKGWKPGN 170

This family consists of several hypothetical plant proteins from Arabidopsis thaliana and Oryza sativa. The function of this family is unknown. Length = 176

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	89
PF06364	176	DUF1068: Protein of unknown function (DUF1068); In	100.0
KOG1823	1364	consensus DRIM (Down-regulated in metastasis)-like	99.82

>PF06364 DUF1068: Protein of unknown function (DUF1068); InterPro: IPR010471 This family consists of several hypothetical plant proteins from Arabidopsis thaliana and Oryza sativa

Probab=100.00  E-value=2.3e-52  Score=311.81  Aligned_cols=89  Identities=58%  Similarity=0.951  Sum_probs=87.6

Q ss_pred             CchhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHhHHHHHHHHHHHHHHhhHhHHHHHHHH
Q 034629            1 MEKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCTAGIETCEEARERAEKDLGEESRLSALWEKRA   80 (89)
Q Consensus         1 meK~f~~LLsEELkLqe~vA~e~~~~~~~~lleAKk~aSqYQkEAeKCn~gmeTCEeARErAEa~L~~e~KltalWE~RA   80 (89)
                      |+|+|+|||+|||+||++||+++++|+|++|+||||++|||||||||||+||||||+||||||++|++|||||+|||+||
T Consensus        82 meK~~~~LL~EELkLqe~~A~e~~~~~~~~lleAkk~asqYQkEAeKCnsgmeTCEeAREkaEa~L~~e~KltalWE~RA  161 (176)
T PF06364_consen   82 MEKNFVDLLSEELKLQEAVANENQRRADMALLEAKKMASQYQKEAEKCNSGMETCEEAREKAEAALVEERKLTALWEQRA  161 (176)
T ss_pred             HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCCcCC
Q 034629           81 REHGWKDDS   89 (89)
Q Consensus        81 Rq~GW~~~~   89 (89)
                      ||+||+++.
T Consensus       162 Rq~GWk~~~  170 (176)
T PF06364_consen  162 RQLGWKEGA  170 (176)
T ss_pred             HHcCCCccc
Confidence            999999873

The function of this family is unknown.

>KOG1823 consensus DRIM (Down-regulated in metastasis)-like proteins [Defense mechanisms]

Probab=99.82  E-value=3.6e-20  Score=167.04  Aligned_cols=88  Identities=40%  Similarity=0.687  Sum_probs=86.0

Q ss_pred             CchhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhh--hhHHhHHHHH--HHHHHHHHHhhHhHHHH
Q 034629            1 MEKDTVALLSEELALQKSVANETLQRSKELIMDARKASSHYQREAEKCT--AGIETCEEAR--ERAEKDLGEESRLSALW   76 (89)
Q Consensus         1 meK~f~~LLsEELkLqe~vA~e~~~~~~~~lleAKk~aSqYQkEAeKCn--~gmeTCEeAR--ErAEa~L~~e~KltalW   76 (89)
                      ++|+|++||.+||++++.++.+++.|.++.|+++|..+|+|||++++||  ++|++||.+|  ++++|++.++||.+..|
T Consensus      1273 ~~~~yl~ll~~eLk~~e~q~l~~l~~e~i~lLe~K~~as~y~k~~~~c~~~a~e~~~er~rk~ap~~Aa~~K~rK~~~k~ 1352 (1364)
T KOG1823|consen 1273 VEKAYLELLTEELKLEEAQALEKLRREDIGLLEAKVGASSYQKEAAKCNKQAAEERCERARKTAPAEAALKKQRKHTRKW 1352 (1364)
T ss_pred             hHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhcChhhhhHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999999  9999999999  99999999999999999


Q ss_pred             HHHHHHcCCCcC
Q 034629           77 EKRAREHGWKDD   88 (89)
Q Consensus        77 E~RARq~GW~~~   88 (89)
                      |.|+|+.||+++
T Consensus      1353 E~Rkr~k~~~~~ 1364 (1364)
T KOG1823|consen 1353 EERKRQKGWRGG 1364 (1364)
T ss_pred             HHHHhhcccCCC
Confidence            999999999874

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00