Citrus Sinensis ID: 034912

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------8
Protein Sequence
MQLRDEFWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLIREG
Secondary Structure (PSIPRED)
ccHHHHHHcccccccccHHHHHHHHHHHHccHHHHHHHHHHHccEEcccccHHHHHccccccccccEEEEccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHccccccccHHHHHHHHHHHHHcHHHHHHHHHHcccEccccccHHEEHcccccEEccEEEEcccccccccc
Coil and Loop (DISEMBL)
mqlrdefwdtaphyggrKEIWDALRAAAEADLSLAQAIVDSAGvivqsadlticydergakyelpkyvlseptnlireg
Flexible Loop (DISEMBL)
mqlrdefwdtaphyggrKEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTICYDergakyelpkyvlseptnlireg
Low Complexity Region (SEG)
MQLRDEFWDTAPHYGGRKEIWDalraaaeadlslaqaIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLIREG
Disordered region (IsUnstruct)
******FWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVL**********
Disordered Region (DISOPRED)
*QLRDEFWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNL****
Disordered Region (DISEMBL)
MQLRDEFWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLIREG
Disordered Region (DISPRO)
MQLRDEFWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNL****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQLRDEFWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLIREG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	79	2.2.26 [Sep-21-2011]
Q6DG43	240	Ubiquitin domain-containi	yes	no	0.949	0.312	0.594	3e-20
Q4V8W7	227	Ubiquitin domain-containi	no	no	0.949	0.330	0.607	7e-20
Q6PGH0	234	Ubiquitin domain-containi	yes	no	0.949	0.320	0.582	1e-19
Q8WUN7	234	Ubiquitin domain-containi	yes	no	0.949	0.320	0.582	1e-19
Q5EAE3	234	Ubiquitin domain-containi	yes	no	0.949	0.320	0.582	1e-19
Q6GL38	240	Ubiquitin domain-containi	yes	no	0.949	0.312	0.607	1e-19
Q640W6	234	Ubiquitin domain-containi	N/A	no	0.949	0.320	0.582	1e-19
Q9HAC8	227	Ubiquitin domain-containi	no	no	0.949	0.330	0.582	3e-15
Q91WB7	227	Ubiquitin domain-containi	no	no	0.949	0.330	0.582	3e-15
Q3ZBQ1	227	Ubiquitin domain-containi	no	no	0.949	0.330	0.582	3e-15

>sp|Q6DG43|UBTD2_DANRE Ubiquitin domain-containing protein 2 OS=Danio rerio GN=ubtd2 PE=2 SV=1

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 47/79 (59%), Positives = 56/79 (70%), Gaps = 4/79 (5%)

Query: 4   RDEFWDTAPHYGGRKEIWDALRAAAEA----DLSLAQAIVDSAGVIVQSADLTICYDERG 59
           RDEFWDTAP + GRKEIWDAL+AAA+A    D  LAQAI+D A + +    LT CYDE G
Sbjct: 54  RDEFWDTAPAFEGRKEIWDALKAAAQAFESNDHELAQAIIDGASITLPHGALTECYDELG 113

Query: 60  AKYELPKYVLSEPTNLIRE 78
            +Y+LP Y LS P N+I E
Sbjct: 114 NRYQLPVYCLSPPVNMIEE 132

Danio rerio (taxid: 7955)

>sp|Q4V8W7|UBTD1_DANRE Ubiquitin domain-containing protein 1 OS=Danio rerio GN=ubtd1 PE=2 SV=1

 Score = 95.9 bits (237), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 48/79 (60%), Positives = 55/79 (69%), Gaps = 4/79 (5%)

Query: 4   RDEFWDTAPHYGGRKEIWDALRAAAEA----DLSLAQAIVDSAGVIVQSADLTICYDERG 59
           RDEFWDTAP + GRKEIWDAL+AAA A    D  LAQAIVD A + +    LT CYDE G
Sbjct: 52  RDEFWDTAPAFEGRKEIWDALKAAAVALECSDHELAQAIVDGANITLPHGSLTECYDELG 111

Query: 60  AKYELPKYVLSEPTNLIRE 78
            +Y+LP Y L+ P NLI E
Sbjct: 112 NRYQLPVYCLAPPVNLISE 130

Danio rerio (taxid: 7955)

>sp|Q6PGH0|UBTD2_MOUSE Ubiquitin domain-containing protein 2 OS=Mus musculus GN=Ubtd2 PE=2 SV=1

 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/79 (58%), Positives = 55/79 (69%), Gaps = 4/79 (5%)

Query: 4   RDEFWDTAPHYGGRKEIWDALRAAAEA----DLSLAQAIVDSAGVIVQSADLTICYDERG 59
           RDEFWDTAP + GRKEIWDAL+AAA A    D  LAQAI+D A + +    LT CYDE G
Sbjct: 54  RDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELG 113

Query: 60  AKYELPKYVLSEPTNLIRE 78
            +Y+LP Y L+ P N+I E
Sbjct: 114 NRYQLPVYCLAPPINMIEE 132

Mus musculus (taxid: 10090)

>sp|Q8WUN7|UBTD2_HUMAN Ubiquitin domain-containing protein 2 OS=Homo sapiens GN=UBTD2 PE=1 SV=2

 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/79 (58%), Positives = 55/79 (69%), Gaps = 4/79 (5%)

Query: 4   RDEFWDTAPHYGGRKEIWDALRAAAEA----DLSLAQAIVDSAGVIVQSADLTICYDERG 59
           RDEFWDTAP + GRKEIWDAL+AAA A    D  LAQAI+D A + +    LT CYDE G
Sbjct: 54  RDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELG 113

Query: 60  AKYELPKYVLSEPTNLIRE 78
            +Y+LP Y L+ P N+I E
Sbjct: 114 NRYQLPVYCLAPPINMIEE 132

Homo sapiens (taxid: 9606)

>sp|Q5EAE3|UBTD2_BOVIN Ubiquitin domain-containing protein 2 OS=Bos taurus GN=UBTD2 PE=2 SV=1

 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/79 (58%), Positives = 55/79 (69%), Gaps = 4/79 (5%)

Query: 4   RDEFWDTAPHYGGRKEIWDALRAAAEA----DLSLAQAIVDSAGVIVQSADLTICYDERG 59
           RDEFWDTAP + GRKEIWDAL+AAA A    D  LAQAI+D A + +    LT CYDE G
Sbjct: 54  RDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELG 113

Query: 60  AKYELPKYVLSEPTNLIRE 78
            +Y+LP Y L+ P N+I E
Sbjct: 114 NRYQLPVYCLAPPINMIEE 132

Bos taurus (taxid: 9913)

>sp|Q6GL38|UBTD1_XENTR Ubiquitin domain-containing protein 1 OS=Xenopus tropicalis GN=ubtd1 PE=2 SV=1

 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 48/79 (60%), Positives = 55/79 (69%), Gaps = 4/79 (5%)

Query: 4   RDEFWDTAPHYGGRKEIWDALRAAAEA----DLSLAQAIVDSAGVIVQSADLTICYDERG 59
           RDEFWDTAP + GRKEIWDAL+AAA A    D  LAQAIVD A + +    LT CYDE G
Sbjct: 55  RDEFWDTAPAFEGRKEIWDALKAAAFAVEANDHELAQAIVDGASITLPHGSLTECYDELG 114

Query: 60  AKYELPKYVLSEPTNLIRE 78
            +Y+LP Y L+ P NLI E
Sbjct: 115 TRYQLPVYCLAPPVNLIME 133

Xenopus tropicalis (taxid: 8364)

>sp|Q640W6|UBTD1_XENLA Ubiquitin domain-containing protein 1 OS=Xenopus laevis GN=ubtd1 PE=2 SV=1

 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/79 (58%), Positives = 55/79 (69%), Gaps = 4/79 (5%)

Query: 4   RDEFWDTAPHYGGRKEIWDALRAAAEA----DLSLAQAIVDSAGVIVQSADLTICYDERG 59
           RDEFWDTAP + GRKEIWDAL+AAA A    D  LAQAI+D A + +    LT CYDE G
Sbjct: 54  RDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGASITLPHGALTECYDELG 113

Query: 60  AKYELPKYVLSEPTNLIRE 78
            +Y+LP Y L+ P N+I E
Sbjct: 114 NRYQLPVYCLAPPINMIEE 132

Xenopus laevis (taxid: 8355)

>sp|Q9HAC8|UBTD1_HUMAN Ubiquitin domain-containing protein 1 OS=Homo sapiens GN=UBTD1 PE=1 SV=1

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/79 (58%), Positives = 54/79 (68%), Gaps = 4/79 (5%)

Query: 4   RDEFWDTAPHYGGRKEIWDALRAAAEA----DLSLAQAIVDSAGVIVQSADLTICYDERG 59
           RDEFWDTAP + GRKEIWDAL+AAA A    D  LAQAI+D A + +    L  CYDE G
Sbjct: 51  RDEFWDTAPAFEGRKEIWDALKAAAYAAEANDHELAQAILDGASITLPHGTLCECYDELG 110

Query: 60  AKYELPKYVLSEPTNLIRE 78
            +Y+LP Y LS P NL+ E
Sbjct: 111 NRYQLPIYCLSPPVNLLLE 129

Homo sapiens (taxid: 9606)

>sp|Q91WB7|UBTD1_MOUSE Ubiquitin domain-containing protein 1 OS=Mus musculus GN=Ubtd1 PE=2 SV=1

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/79 (58%), Positives = 54/79 (68%), Gaps = 4/79 (5%)

Query: 4   RDEFWDTAPHYGGRKEIWDALRAAAEA----DLSLAQAIVDSAGVIVQSADLTICYDERG 59
           RDEFWDTAP + GRKEIWDAL+AAA A    D  LAQAI+D A + +    L  CYDE G
Sbjct: 51  RDEFWDTAPAFEGRKEIWDALKAAAYAAEANDHELAQAILDGASITLPHGTLCECYDELG 110

Query: 60  AKYELPKYVLSEPTNLIRE 78
            +Y+LP Y LS P NL+ E
Sbjct: 111 NRYQLPIYCLSPPVNLLLE 129

Mus musculus (taxid: 10090)

>sp|Q3ZBQ1|UBTD1_BOVIN Ubiquitin domain-containing protein 1 OS=Bos taurus GN=UBTD1 PE=2 SV=1

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/79 (58%), Positives = 54/79 (68%), Gaps = 4/79 (5%)

Query: 4   RDEFWDTAPHYGGRKEIWDALRAAAEA----DLSLAQAIVDSAGVIVQSADLTICYDERG 59
           RDEFWDTAP + GRKEIWDAL+AAA A    D  LAQAI+D A + +    L  CYDE G
Sbjct: 51  RDEFWDTAPAFEGRKEIWDALKAAAYAAEANDHELAQAILDGASITLPHGTLCECYDELG 110

Query: 60  AKYELPKYVLSEPTNLIRE 78
            +Y+LP Y LS P NL+ E
Sbjct: 111 NRYQLPIYCLSPPVNLLLE 129

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	79
225461728	114	PREDICTED: ubiquitin domain-containing p	1.0	0.692	0.936	7e-37
224117000	114	predicted protein [Populus trichocarpa]	0.987	0.684	0.948	8e-37
357452077	114	Ubiquitin domain-containing protein [Med	0.987	0.684	0.935	1e-36
388512091	114	unknown [Lotus japonicus]	0.987	0.684	0.935	2e-36
351721822	114	uncharacterized protein LOC100306399 [Gl	0.974	0.675	0.948	2e-36
388510626	114	unknown [Lotus japonicus]	0.987	0.684	0.923	5e-36
356544112	114	PREDICTED: ubiquitin domain-containing p	0.974	0.675	0.935	6e-36
225443726	114	PREDICTED: ubiquitin domain-containing p	0.987	0.684	0.910	2e-35
449456569	111	PREDICTED: ubiquitin domain-containing p	0.962	0.684	0.921	5e-35
18404455	114	Ubiquitin domain-containing protein [Ara	1.0	0.692	0.886	1e-34

>gi|225461728|ref|XP_002285516.1| PREDICTED: ubiquitin domain-containing protein 1 [Vitis vinifera] gi|147767244|emb|CAN66729.1| hypothetical protein VITISV_025684 [Vitis vinifera] gi|302142875|emb|CBI20170.3| unnamed protein product [Vitis vinifera]

 Score =  157 bits (397), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 74/79 (93%), Positives = 78/79 (98%)

Query: 1   MQLRDEFWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTICYDERGA 60
           MQ+RDEFWDTAPHYGG+KEIWDALRAAAEADL+LAQAIVDSAGVIVQSADLTICYDERGA
Sbjct: 36  MQMRDEFWDTAPHYGGQKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGA 95

Query: 61  KYELPKYVLSEPTNLIREG 79
           KYELP YVLSEPTNLIR+G
Sbjct: 96  KYELPHYVLSEPTNLIRDG 114

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117000|ref|XP_002317449.1| predicted protein [Populus trichocarpa] gi|222860514|gb|EEE98061.1| predicted protein [Populus trichocarpa]

 Score =  157 bits (397), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 74/78 (94%), Positives = 78/78 (100%)

Query: 1   MQLRDEFWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTICYDERGA 60
           MQ+RDEFWDTAPHYGGRKEIWDALRAAA+A+LSLAQAIVDSAGVIVQ+ADLTICYDERGA
Sbjct: 36  MQMRDEFWDTAPHYGGRKEIWDALRAAADAELSLAQAIVDSAGVIVQNADLTICYDERGA 95

Query: 61  KYELPKYVLSEPTNLIRE 78
           KYELPKYVLSEPTNLIRE
Sbjct: 96  KYELPKYVLSEPTNLIRE 113

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357452077|ref|XP_003596315.1| Ubiquitin domain-containing protein [Medicago truncatula] gi|355485363|gb|AES66566.1| Ubiquitin domain-containing protein [Medicago truncatula] gi|388514353|gb|AFK45238.1| unknown [Medicago truncatula]

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 73/78 (93%), Positives = 78/78 (100%)

Query: 1   MQLRDEFWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTICYDERGA 60
           +QLRDEFWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQS+DLT+CYDERGA
Sbjct: 36  IQLRDEFWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSSDLTVCYDERGA 95

Query: 61  KYELPKYVLSEPTNLIRE 78
           KYELPKYVLSEPTN+I+E
Sbjct: 96  KYELPKYVLSEPTNMIQE 113

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388512091|gb|AFK44107.1| unknown [Lotus japonicus]

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 73/78 (93%), Positives = 78/78 (100%)

Query: 1   MQLRDEFWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTICYDERGA 60
           +QLRDEFWDTAPHYGGRKEIWDALRAAAEADL+LAQAIVDSAGVIVQS+DLT+CYDERGA
Sbjct: 36  IQLRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSSDLTVCYDERGA 95

Query: 61  KYELPKYVLSEPTNLIRE 78
           KYELPKYVLSEPTNLIR+
Sbjct: 96  KYELPKYVLSEPTNLIRD 113

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721822|ref|NP_001238246.1| uncharacterized protein LOC100306399 [Glycine max] gi|255628415|gb|ACU14552.1| unknown [Glycine max]

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 73/77 (94%), Positives = 77/77 (100%)

Query: 2   QLRDEFWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTICYDERGAK 61
           QLRDEFWDTAPHYGGRKEIWDALRAAAEADL+LAQAIVDSAGVIVQS+DLT+CYDERGAK
Sbjct: 37  QLRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSSDLTVCYDERGAK 96

Query: 62  YELPKYVLSEPTNLIRE 78
           YELPKYVLSEPTNLIR+
Sbjct: 97  YELPKYVLSEPTNLIRD 113

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388510626|gb|AFK43379.1| unknown [Lotus japonicus]

 Score =  154 bits (390), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 72/78 (92%), Positives = 78/78 (100%)

Query: 1   MQLRDEFWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTICYDERGA 60
           +QLRDEFWDTAPH+GGRKEIWDALRAAAEADL+LAQAIVDSAGVIVQS+DLT+CYDERGA
Sbjct: 36  IQLRDEFWDTAPHHGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSSDLTVCYDERGA 95

Query: 61  KYELPKYVLSEPTNLIRE 78
           KYELPKYVLSEPTNLIR+
Sbjct: 96  KYELPKYVLSEPTNLIRD 113

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544112|ref|XP_003540499.1| PREDICTED: ubiquitin domain-containing protein 1-like [Glycine max]

 Score =  154 bits (389), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 72/77 (93%), Positives = 76/77 (98%)

Query: 2   QLRDEFWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTICYDERGAK 61
           QLRDEFWDTAPHYGGRKEIWDALRAAAEADL+LAQ IVDSAGVIVQS+DLT+CYDERGAK
Sbjct: 37  QLRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQVIVDSAGVIVQSSDLTVCYDERGAK 96

Query: 62  YELPKYVLSEPTNLIRE 78
           YELPKYVLSEPTNLIR+
Sbjct: 97  YELPKYVLSEPTNLIRD 113

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443726|ref|XP_002267858.1| PREDICTED: ubiquitin domain-containing protein 1 [Vitis vinifera] gi|297740542|emb|CBI30724.3| unnamed protein product [Vitis vinifera]

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/78 (91%), Positives = 75/78 (96%)

Query: 2   QLRDEFWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTICYDERGAK 61
           Q+RDEFWDTAPHYGG+KEIWDALRAA EADL+LAQAIVDSAGVIVQSADLT CYDERGAK
Sbjct: 37  QMRDEFWDTAPHYGGQKEIWDALRAATEADLTLAQAIVDSAGVIVQSADLTTCYDERGAK 96

Query: 62  YELPKYVLSEPTNLIREG 79
           YELPKYVLSEPTNLIR+ 
Sbjct: 97  YELPKYVLSEPTNLIRDN 114

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456569|ref|XP_004146021.1| PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis sativus] gi|449518063|ref|XP_004166063.1| PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis sativus]

 Score =  151 bits (382), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 70/76 (92%), Positives = 76/76 (100%)

Query: 1   MQLRDEFWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTICYDERGA 60
           +++RDEFWDTAPHYGGRKEIWDALRAAAEADL+LAQAIVDSAG+IVQSADLTICYDERGA
Sbjct: 36  VRMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGIIVQSADLTICYDERGA 95

Query: 61  KYELPKYVLSEPTNLI 76
           KYELPKYVLSEPTNL+
Sbjct: 96  KYELPKYVLSEPTNLV 111

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18404455|ref|NP_564630.1| Ubiquitin domain-containing protein [Arabidopsis thaliana] gi|297847740|ref|XP_002891751.1| hypothetical protein ARALYDRAFT_474470 [Arabidopsis lyrata subsp. lyrata] gi|7769863|gb|AAF69541.1|AC008007_16 F12M16.29 [Arabidopsis thaliana] gi|13877803|gb|AAK43979.1|AF370164_1 unknown protein [Arabidopsis thaliana] gi|16323476|gb|AAL15232.1| unknown protein [Arabidopsis thaliana] gi|297337593|gb|EFH68010.1| hypothetical protein ARALYDRAFT_474470 [Arabidopsis lyrata subsp. lyrata] gi|332194816|gb|AEE32937.1| Ubiquitin domain-containing protein [Arabidopsis thaliana]

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 70/79 (88%), Positives = 75/79 (94%)

Query: 1   MQLRDEFWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTICYDERGA 60
           M+LR+EFWDTAPHYGGRKEIWDALRAAAEAD+SLAQAIVDSAGVIVQ+ DLT+CYDERGA
Sbjct: 36  MKLREEFWDTAPHYGGRKEIWDALRAAAEADISLAQAIVDSAGVIVQNTDLTVCYDERGA 95

Query: 61  KYELPKYVLSEPTNLIREG 79
           KYELPKYVLSEPTNL  E 
Sbjct: 96  KYELPKYVLSEPTNLEEEN 114

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	79
TAIR|locus:2009685	114	AT1G53400 [Arabidopsis thalian	0.987	0.684	0.717	4.5e-27
TAIR|locus:2171933	118	AT5G45740 "AT5G45740" [Arabido	0.962	0.644	0.644	1.6e-24
TAIR|locus:2015566	114	AT1G16960 "AT1G16960" [Arabido	0.949	0.657	0.631	4.8e-23
ZFIN|ZDB-GENE-040718-473	244	ubtd2 "ubiquitin domain contai	0.949	0.307	0.455	3.8e-14
ZFIN|ZDB-GENE-050913-62	227	ubtd1b "ubiquitin domain conta	0.949	0.330	0.468	3.8e-14
FB|FBgn0264712	249	CG1172 [Drosophila melanogaste	0.949	0.301	0.455	4.9e-14
ZFIN|ZDB-GENE-070424-93	230	ubtd1a "ubiquitin domain conta	0.949	0.326	0.455	6.2e-14
UNIPROTKB|E1C4N1	234	UBTD2 "Uncharacterized protein	0.949	0.320	0.443	1e-13
UNIPROTKB|Q5EAE3	234	UBTD2 "Ubiquitin domain-contai	0.949	0.320	0.443	1e-13
UNIPROTKB|E2QTA0	234	UBTD2 "Uncharacterized protein	0.949	0.320	0.443	1e-13

TAIR|locus:2009685 AT1G53400 [Arabidopsis thaliana (taxid:3702)]

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 56/78 (71%), Positives = 60/78 (76%)

Query:     1 MQLRDEFWDTAPHYGGRKEIWDXXXXXXXXXXXXXXXIVDSAGVIVQSADLTICYDERGA 60
             M+LR+EFWDTAPHYGGRKEIWD               IVDSAGVIVQ+ DLT+CYDERGA
Sbjct:    36 MKLREEFWDTAPHYGGRKEIWDALRAAAEADISLAQAIVDSAGVIVQNTDLTVCYDERGA 95

Query:    61 KYELPKYVLSEPTNLIRE 78
             KYELPKYVLSEPTNL  E
Sbjct:    96 KYELPKYVLSEPTNLEEE 113

GO:0005737 "cytoplasm" evidence=ISM

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2171933 AT5G45740 "AT5G45740" [Arabidopsis thaliana (taxid:3702)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 49/76 (64%), Positives = 60/76 (78%)

Query:     3 LRDEFWDTAPHYGGRKEIWDXXXXXXXXXXXXXXXIVDSAGVIVQSADLTICYDERGAKY 62
             +R+EFWDT+PHYGG++EIW+               IVDSAGVIVQ+ DLT+C+DERGA+Y
Sbjct:    40 MREEFWDTSPHYGGQREIWEALRAAAEADLKLAQTIVDSAGVIVQNRDLTLCWDERGARY 99

Query:    63 ELPKYVLSEPTNLIRE 78
             ELP+YVLSEPTNLIRE
Sbjct:   100 ELPRYVLSEPTNLIRE 115

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2015566 AT1G16960 "AT1G16960" [Arabidopsis thaliana (taxid:3702)]

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 48/76 (63%), Positives = 58/76 (76%)

Query:     2 QLRDEFWDTAPHYGGRKEIWDXXXXXXXXXXXXXX-XIVDSAGVIVQSADLTICYDERGA 60
             Q+R+EFWDTAPHYGG+KEIWD                I++SAGVIVQ+ DLTICYDE+G+
Sbjct:    36 QMREEFWDTAPHYGGKKEIWDALRAAAEEDDLSLAQTILESAGVIVQNTDLTICYDEKGS 95

Query:    61 KYELPKYVLSEPTNLI 76
             KYELPKYVL +P+NLI
Sbjct:    96 KYELPKYVLRDPSNLI 111

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

ZFIN|ZDB-GENE-040718-473 ubtd2 "ubiquitin domain containing 2" [Danio rerio (taxid:7955)]

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 36/79 (45%), Positives = 43/79 (54%)

Query:     4 RDEFWDTAPHYGGRKEIWDXXXXXXXXXXXX----XXXIVDSAGVIVQSADLTICYDERG 59
             RDEFWDTAP + GRKEIWD                   I+D A + +    LT CYDE G
Sbjct:    58 RDEFWDTAPAFEGRKEIWDALKAAAQAFESNDHELAQAIIDGASITLPHGALTECYDELG 117

Query:    60 AKYELPKYVLSEPTNLIRE 78
              +Y+LP Y LS P N+I E
Sbjct:   118 NRYQLPVYCLSPPVNMIEE 136

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA

ZFIN|ZDB-GENE-050913-62 ubtd1b "ubiquitin domain containing 1b" [Danio rerio (taxid:7955)]

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 37/79 (46%), Positives = 43/79 (54%)

Query:     4 RDEFWDTAPHYGGRKEIWDXXXXXXXXXXXX----XXXIVDSAGVIVQSADLTICYDERG 59
             RDEFWDTAP + GRKEIWD                   IVD A + +    LT CYDE G
Sbjct:    52 RDEFWDTAPAFEGRKEIWDALKAAAVALECSDHELAQAIVDGANITLPHGSLTECYDELG 111

Query:    60 AKYELPKYVLSEPTNLIRE 78
              +Y+LP Y L+ P NLI E
Sbjct:   112 NRYQLPVYCLAPPVNLISE 130

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

FB|FBgn0264712 CG1172 [Drosophila melanogaster (taxid:7227)]

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 36/79 (45%), Positives = 45/79 (56%)

Query:     4 RDEFWDTAPHYGGRKEIWDXXXXXXXXXXXX----XXXIVDSAGVIVQSADLTICYDERG 59
             RDEFWDTAP + GRKEIWD                   I+D A V V +  LT CYDE G
Sbjct:    63 RDEFWDTAPAFDGRKEIWDALRAATTAAEGLDFQMAQAILDGANVSVPNGYLTECYDELG 122

Query:    60 AKYELPKYVLSEPTNLIRE 78
              +Y++P Y LS P N+++E
Sbjct:   123 TQYKVPIYCLSYPINIVKE 141

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

ZFIN|ZDB-GENE-070424-93 ubtd1a "ubiquitin domain containing 1a" [Danio rerio (taxid:7955)]

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 36/79 (45%), Positives = 42/79 (53%)

Query:     4 RDEFWDTAPHYGGRKEIWDXXXXXXXXXX----XXXXXIVDSAGVIVQSADLTICYDERG 59
             RDEFWDTAP + GRKEIWD                   IVD A + +    L  CYDE G
Sbjct:    55 RDEFWDTAPAFDGRKEIWDALKAAAVAIECNDHQLAQAIVDGASITLPHGSLMECYDELG 114

Query:    60 AKYELPKYVLSEPTNLIRE 78
              +Y+LP Y LS P NL+ E
Sbjct:   115 NRYQLPAYCLSPPVNLVSE 133

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|E1C4N1 UBTD2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 35/79 (44%), Positives = 43/79 (54%)

Query:     4 RDEFWDTAPHYGGRKEIWDXXXXXXXXXXXX----XXXIVDSAGVIVQSADLTICYDERG 59
             RDEFWDTAP + GRKEIWD                   I+D A + +    LT CYDE G
Sbjct:    54 RDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELG 113

Query:    60 AKYELPKYVLSEPTNLIRE 78
              +Y+LP Y L+ P N+I E
Sbjct:   114 NRYQLPVYCLAPPINMIEE 132

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|Q5EAE3 UBTD2 "Ubiquitin domain-containing protein 2" [Bos taurus (taxid:9913)]

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 35/79 (44%), Positives = 43/79 (54%)

Query:     4 RDEFWDTAPHYGGRKEIWDXXXXXXXXXXXX----XXXIVDSAGVIVQSADLTICYDERG 59
             RDEFWDTAP + GRKEIWD                   I+D A + +    LT CYDE G
Sbjct:    54 RDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELG 113

Query:    60 AKYELPKYVLSEPTNLIRE 78
              +Y+LP Y L+ P N+I E
Sbjct:   114 NRYQLPVYCLAPPINMIEE 132

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|E2QTA0 UBTD2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 35/79 (44%), Positives = 43/79 (54%)

Query:     4 RDEFWDTAPHYGGRKEIWDXXXXXXXXXXXX----XXXIVDSAGVIVQSADLTICYDERG 59
             RDEFWDTAP + GRKEIWD                   I+D A + +    LT CYDE G
Sbjct:    54 RDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELG 113

Query:    60 AKYELPKYVLSEPTNLIRE 78
              +Y+LP Y L+ P N+I E
Sbjct:   114 NRYQLPVYCLAPPINMIEE 132

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pm.C_LG_XI0246 hypothetical protein (114 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	79
KOG0013	231	consensus Uncharacterized conserved protein [Funct	100.0
KOG0013	231	consensus Uncharacterized conserved protein [Funct	99.7

>KOG0013 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=2.4e-34  Score=215.58  Aligned_cols=77  Identities=57%  Similarity=0.953  Sum_probs=73.1

Q ss_pred             hhhhhhhccCCCCCCcHHHHHHHHHHHHh----cHHHHHHHHHHcCceeecCCeeeeeccCCCccccCceeeeCCCCccc
Q 034912            2 QLRDEFWDTAPHYGGRKEIWDALRAAAEA----DLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLIR   77 (79)
Q Consensus         2 ~~R~EFwdT~p~~~Gr~EIW~aLraA~e~----d~~tAq~ildaA~itlp~g~L~~~YDe~G~~Y~lP~~vis~P~N~~~   77 (79)
                      .||+|||||+|+|+||+|||||||+|.-+    |.+.||+|+|+|+||+|+|+|+.|||++|+.|.+|.||++-|.|++.
T Consensus        46 skRdEFWdTapAf~GrKEIWDaL~aa~ta~e~~d~e~Aqai~dgA~~tiP~g~l~ecydelg~~y~~p~ycls~p~n~~~  125 (231)
T KOG0013|consen   46 SKRDEFWDTAPAFGGRKEIWDALHAAVTAAEEGDAEAAQAILDGADLTIPEGDLSECYDELGGTYYEPIYCLSRPPNAFA  125 (231)
T ss_pred             hhhhhhhhcccccCCcHHHHHHHHHHHHHHhcccHHHHHHHHhccccccCCcchHHHHHhhCCeEeecceeeccCchHHH
Confidence            48999999999999999999999998753    99999999999999999999999999999999999999999999875


Q ss_pred             C
Q 034912           78 E   78 (79)
Q Consensus        78 ~   78 (79)
                      +
T Consensus       126 E  126 (231)
T KOG0013|consen  126 E  126 (231)
T ss_pred             h
Confidence            3

>KOG0013 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.70  E-value=8.4e-18  Score=126.58  Aligned_cols=76  Identities=47%  Similarity=0.700  Sum_probs=73.4

Q ss_pred             hhhhhhhccCCCCCCcHHHHHHHHHHHHhcHHHHHHHHHHcCceeecCCeeeeeccCCCccccCceeeeCCCCcccC
Q 034912            2 QLRDEFWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLIRE   78 (79)
Q Consensus         2 ~~R~EFwdT~p~~~Gr~EIW~aLraA~e~d~~tAq~ildaA~itlp~g~L~~~YDe~G~~Y~lP~~vis~P~N~~~~   78 (79)
                      +.|++||+|.|+++|..|||.+||+|.+.| ..+|.|+.++++.+-+-+|+.|||+.|.+|.||.+|+++|.|+...
T Consensus       154 tT~~d~~lta~~~Dtv~eik~~L~Aaeg~D-~~sQrif~Sg~~l~dkt~LeEc~iekg~rYvlqviVlq~~~Nl~~q  229 (231)
T KOG0013|consen  154 TTREDFWLTAPHYDTVGEIKRALRAAEGVD-PLSQRIFFSGGVLVDKTDLEECKIEKGQRYVLQVIVLQEPKNLSPQ  229 (231)
T ss_pred             hhhhheeecccCcCcHHHHHHHHHHhhccc-hhhheeeccCCceeccccceeeeecCCCEEEEEEEeccCCCCCCCC
Confidence            579999999999999999999999999899 9999999999999999999999999999999999999999999864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	79
2ksn_A	137	Solution Structure Of The N-Terminal Domain Of Dc-U		7e-14

>pdb|2KSN|A Chain A, Solution Structure Of The N-Terminal Domain Of Dc-UbpUBTD2 Length = 137

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 4   RDEFWDTAPHYGGRKEIWDXXXXXXXXXXXX----XXXIVDSAGVIVQSADLTICYDERG 59
           RDEFWDTAP + GRKEIWD                   I+D A + +    LT CYDE G
Sbjct: 42  RDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELG 101
Query: 60  AKYELPKYVLSEPTNLIRE 78
            +Y+LP Y L+ P N+I E
Sbjct: 102 NRYQLPVYCLAPPINMIEE 120
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	79
2ksn_A	137	Ubiquitin domain-containing protein 2; UBTD2, DC-U	4e-36

>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens} Length = 137

 Score =  117 bits (294), Expect = 4e-36
 Identities = 46/81 (56%), Positives = 55/81 (67%), Gaps = 4/81 (4%)

Query: 2   QLRDEFWDTAPHYGGRKEIWDALRAAAEA----DLSLAQAIVDSAGVIVQSADLTICYDE 57
             RDEFWDTAP + GRKEIWDAL+AAA A    D  LAQAI+D A + +    LT CYDE
Sbjct: 40  SKRDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDE 99

Query: 58  RGAKYELPKYVLSEPTNLIRE 78
            G +Y+LP Y L+ P N+I E
Sbjct: 100 LGNRYQLPVYCLAPPINMIEE 120

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	79
2ksn_A	137	Ubiquitin domain-containing protein 2; UBTD2, DC-U	100.0

>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}

Probab=100.00  E-value=3.3e-47  Score=266.78  Aligned_cols=77  Identities=60%  Similarity=1.031  Sum_probs=74.7

Q ss_pred             hhhhhhhccCCCCCCcHHHHHHHHHHHHh----cHHHHHHHHHHcCceeecCCeeeeeccCCCccccCceeeeCCCCccc
Q 034912            2 QLRDEFWDTAPHYGGRKEIWDALRAAAEA----DLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLIR   77 (79)
Q Consensus         2 ~~R~EFwdT~p~~~Gr~EIW~aLraA~e~----d~~tAq~ildaA~itlp~g~L~~~YDe~G~~Y~lP~~vis~P~N~~~   77 (79)
                      +||+|||||||+|+||+|||+|||+||++    |++|||+|||+||||||+|||+.|||++|++|+||+||+|+|+||++
T Consensus        40 ~~R~EFWDT~p~~~Gr~EIW~ALraA~~~~e~~Dl~tAQ~IldaAgItvp~gdL~~cYDe~G~~Y~LP~yvls~P~Nl~~  119 (137)
T 2ksn_A           40 SKRDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMIE  119 (137)
T ss_dssp             HHHHHHHTTSSTTCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSCBCSSCCSSEEEETTTEEEECCGGGTCCSTTTCC
T ss_pred             HHHHHHHhcCCccCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHcCCcccCCcHHHHHhccCCccCCCeeEeeCCccccc
Confidence            79999999999999999999999999963    99999999999999999999999999999999999999999999996


Q ss_pred             C
Q 034912           78 E   78 (79)
Q Consensus        78 ~   78 (79)
                      +
T Consensus       120 ~  120 (137)
T 2ksn_A          120 E  120 (137)
T ss_dssp             C
T ss_pred             c
Confidence            5

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00