Citrus Sinensis ID: 035020

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70------
Protein Sequence
MSALGTSKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYVEYPPEGPRPPSPEELREMARELARNKNIR
Secondary Structure (PSIPRED)
ccccccccccEEEEEEEEEEEEEHHEEEHHHcccHHHHHHHccccEEEccccccccccHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHHEEEEEHEHHHHHHHHHccHHHHHHHHccccEEEccccccccccHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MSALGTSKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKfmgnrsyveyppegprppspeELREMARELARNKNIR
Flexible Loop (DISEMBL)
MSALGTSKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYVEYPPEGprppspeelREMARELARNKNIR
Low Complexity Region (SEG)
MSALGTSKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYVeyppegprppspeelremarelarNKNIR
Disordered region (IsUnstruct)
********GILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSY******************************
Disordered Region (DISOPRED)
*********ILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYVEYP**************************
Disordered Region (DISEMBL)
MSALGTSKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYVEY***********ELREMARE********
Disordered Region (DISPRO)
******SKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYVEYPPEGPRPPSPEELREMARELARN****
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSALGTSKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYVEYPPEGPRPPSPEELREMARELARNKNIR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	76
18414264	76	uncharacterized protein [Arabidopsis tha	1.0	1.0	0.789	9e-29
297853042	78	hypothetical protein ARALYDRAFT_892302 [	0.986	0.961	0.8	1e-28
356500290	76	PREDICTED: uncharacterized protein LOC10	0.973	0.973	0.770	3e-27
224107931	76	predicted protein [Populus trichocarpa]	0.973	0.973	0.743	2e-24
224102141	98	predicted protein [Populus trichocarpa]	0.973	0.755	0.729	3e-24
388506316	77	unknown [Lotus japonicus]	0.973	0.961	0.733	2e-23
30695349	78	uncharacterized protein [Arabidopsis tha	0.855	0.833	0.784	8e-23
358345946	77	hypothetical protein MTR_067s0053 [Medic	0.973	0.961	0.68	5e-22
255551979	76	conserved hypothetical protein [Ricinus	0.960	0.960	0.835	7e-21
449466388	75	PREDICTED: uncharacterized protein LOC10	0.986	1.0	0.789	3e-19

>gi|18414264|ref|NP_567436.1| uncharacterized protein [Arabidopsis thaliana] gi|21593737|gb|AAM65704.1| unknown [Arabidopsis thaliana] gi|26450874|dbj|BAC42544.1| unknown protein [Arabidopsis thaliana] gi|88010872|gb|ABD38866.1| At4g14615 [Arabidopsis thaliana] gi|332658066|gb|AEE83466.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  130 bits (328), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 60/76 (78%), Positives = 68/76 (89%)

Query: 1  MSALGTSKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYVEYPPEGPRPPSPE 60
          MS++GTSKG+LEI KFG+YV VP+ LMYTFANN+ NI+KFMGNRSYV YP E PRPPSP+
Sbjct: 1  MSSVGTSKGVLEIVKFGVYVAVPIVLMYTFANNSTNIKKFMGNRSYVVYPEEAPRPPSPD 60

Query: 61 ELREMARELARNKNIR 76
          ELREMARELAR KNIR
Sbjct: 61 ELREMARELARKKNIR 76

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297853042|ref|XP_002894402.1| hypothetical protein ARALYDRAFT_892302 [Arabidopsis lyrata subsp. lyrata] gi|297340244|gb|EFH70661.1| hypothetical protein ARALYDRAFT_892302 [Arabidopsis lyrata subsp. lyrata]

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 60/75 (80%), Positives = 68/75 (90%)

Query: 1  MSALGTSKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYVEYPPEGPRPPSPE 60
          MS++GTSKGILEIAKFG+YV VP+ LMYTFANN+ NI+KFMGN SYV YP E PRPPSPE
Sbjct: 1  MSSVGTSKGILEIAKFGVYVAVPIVLMYTFANNSTNIKKFMGNHSYVVYPKEAPRPPSPE 60

Query: 61 ELREMARELARNKNI 75
          ELREMA+E+ARNKNI
Sbjct: 61 ELREMAKEIARNKNI 75

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500290|ref|XP_003518966.1| PREDICTED: uncharacterized protein LOC100500641 [Glycine max] gi|255630837|gb|ACU15781.1| unknown [Glycine max]

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 57/74 (77%), Positives = 67/74 (90%)

Query: 1  MSALGTSKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYVEYPPEGPRPPSPE 60
          MS+LGTSKGILEIAKFG+YV VP+ LMYTFANN  N++KFMG+RSY+EYPPE  +PPSPE
Sbjct: 1  MSSLGTSKGILEIAKFGVYVTVPIILMYTFANNPSNLRKFMGHRSYIEYPPEAEKPPSPE 60

Query: 61 ELREMARELARNKN 74
          ELREMARE+AR +N
Sbjct: 61 ELREMAREMARKRN 74

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224107931|ref|XP_002314658.1| predicted protein [Populus trichocarpa] gi|222863698|gb|EEF00829.1| predicted protein [Populus trichocarpa]

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 55/74 (74%), Positives = 63/74 (85%)

Query: 1  MSALGTSKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYVEYPPEGPRPPSPE 60
          MS+LGTSKGILEIAKFG+YV VPV LMY FANNTKN+QKFMGNRSY+ +P +  RPPSPE
Sbjct: 1  MSSLGTSKGILEIAKFGVYVTVPVVLMYAFANNTKNLQKFMGNRSYIVFPSKIVRPPSPE 60

Query: 61 ELREMARELARNKN 74
          E+RE AREL R  +
Sbjct: 61 EMRERARELGRRND 74

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224102141|ref|XP_002312563.1| predicted protein [Populus trichocarpa] gi|222852383|gb|EEE89930.1| predicted protein [Populus trichocarpa]

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 54/74 (72%), Positives = 62/74 (83%)

Query: 2  SALGTSKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYVEYPPEGPRPPSPEE 61
          S+LGTSKGILEIAKFGIYV VP+ LMY+FANNT N+QKFMGNRSY+ +P    RPPSPEE
Sbjct: 24 SSLGTSKGILEIAKFGIYVTVPIVLMYSFANNTNNLQKFMGNRSYIVFPSNTVRPPSPEE 83

Query: 62 LREMARELARNKNI 75
          +RE AR L R K+I
Sbjct: 84 MRERARALGRRKDI 97

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388506316|gb|AFK41224.1| unknown [Lotus japonicus]

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/75 (73%), Positives = 63/75 (84%), Gaps = 1/75 (1%)

Query: 1  MSALGTSKGILEIAKFGIYVGVPVFLMYTFANNTKN-IQKFMGNRSYVEYPPEGPRPPSP 59
          MS+LGTSKGILEIAKFG+YV VP+ LMYTFANNT N + KF+G +SYVEYP +  RPPSP
Sbjct: 1  MSSLGTSKGILEIAKFGVYVTVPIVLMYTFANNTNNYLHKFIGKKSYVEYPRDLERPPSP 60

Query: 60 EELREMARELARNKN 74
          EELRE ARELA  +N
Sbjct: 61 EELREKARELAHKRN 75

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30695349|ref|NP_849801.1| uncharacterized protein [Arabidopsis thaliana] gi|26450958|dbj|BAC42586.1| unknown protein [Arabidopsis thaliana] gi|28416757|gb|AAO42909.1| At1g52821 [Arabidopsis thaliana] gi|332194735|gb|AEE32856.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  110 bits (276), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 51/65 (78%), Positives = 58/65 (89%)

Query: 1  MSALGTSKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYVEYPPEGPRPPSPE 60
          MS++GTSKGILEIAKFG+YV VP+ L+YTFANN+ NI+KFMGN SYV YP E PRPPSPE
Sbjct: 1  MSSVGTSKGILEIAKFGVYVAVPIVLIYTFANNSTNIKKFMGNHSYVVYPKEAPRPPSPE 60

Query: 61 ELREM 65
          ELREM
Sbjct: 61 ELREM 65

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358345946|ref|XP_003637035.1| hypothetical protein MTR_067s0053 [Medicago truncatula] gi|358347027|ref|XP_003637564.1| hypothetical protein MTR_090s0035 [Medicago truncatula] gi|355502970|gb|AES84173.1| hypothetical protein MTR_067s0053 [Medicago truncatula] gi|355503499|gb|AES84702.1| hypothetical protein MTR_090s0035 [Medicago truncatula] gi|388506452|gb|AFK41292.1| unknown [Medicago truncatula]

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 62/75 (82%), Gaps = 1/75 (1%)

Query: 1  MSALGTSKGILEIAKFGIYVGVPVFLMYTFANNTKN-IQKFMGNRSYVEYPPEGPRPPSP 59
          MS+LGTSKGILEIAKFG+YV VP+ LMY +A+NT N + KF+G +SY+EYP +   PP P
Sbjct: 1  MSSLGTSKGILEIAKFGVYVTVPIVLMYVYASNTDNSLHKFIGKKSYIEYPKDTNTPPPP 60

Query: 60 EELREMARELARNKN 74
          EELREMARELAR +N
Sbjct: 61 EELREMARELARKRN 75

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255551979|ref|XP_002517034.1| conserved hypothetical protein [Ricinus communis] gi|223543669|gb|EEF45197.1| conserved hypothetical protein [Ricinus communis]

 Score =  104 bits (259), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 61/73 (83%), Positives = 68/73 (93%)

Query: 1  MSALGTSKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYVEYPPEGPRPPSPE 60
          MS+LGTSKGILEIAKFG+YV VP+ LMYTFANNTKN+QKFMGN+SY+ YPPEGPRPPSPE
Sbjct: 1  MSSLGTSKGILEIAKFGVYVTVPIILMYTFANNTKNLQKFMGNKSYIVYPPEGPRPPSPE 60

Query: 61 ELREMARELARNK 73
          ELREMAREL R +
Sbjct: 61 ELREMARELVRER 73

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449466388|ref|XP_004150908.1| PREDICTED: uncharacterized protein LOC101207372 [Cucumis sativus] gi|449525327|ref|XP_004169669.1| PREDICTED: uncharacterized LOC101207372 [Cucumis sativus]

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/76 (78%), Positives = 70/76 (92%), Gaps = 1/76 (1%)

Query: 1  MSALGTSKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYVEYPPEGPRPPSPE 60
          MS++GTSKGILEIAKFGIYV +P+ LMYTFANN+KN+Q+FMG +SY+ YPPEGPRPPSPE
Sbjct: 1  MSSIGTSKGILEIAKFGIYVTIPIVLMYTFANNSKNLQRFMG-KSYIVYPPEGPRPPSPE 59

Query: 61 ELREMARELARNKNIR 76
          E+REMARELAR  NIR
Sbjct: 60 EVREMARELARKNNIR 75

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	76
TAIR|locus:505006462	76	AT4G14615 "AT4G14615" [Arabido	0.618	0.618	0.765	6e-16
TAIR|locus:1005716767	78	AT1G52825 "AT1G52825" [Arabido	0.618	0.602	0.765	1.6e-15

TAIR|locus:505006462 AT4G14615 "AT4G14615" [Arabidopsis thaliana (taxid:3702)]

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 36/47 (76%), Positives = 43/47 (91%)

Query:     1 MSALGTSKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYV 47
             MS++GTSKG+LEI KFG+YV VP+ LMYTFANN+ NI+KFMGNRSYV
Sbjct:     1 MSSVGTSKGVLEIVKFGVYVAVPIVLMYTFANNSTNIKKFMGNRSYV 47

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:1005716767 AT1G52825 "AT1G52825" [Arabidopsis thaliana (taxid:3702)]

 Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 36/47 (76%), Positives = 43/47 (91%)

Query:     1 MSALGTSKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYV 47
             MS++GTSKGILEIAKFG+YV VP+ L+YTFANN+ NI+KFMGN SYV
Sbjct:     1 MSSVGTSKGILEIAKFGVYVAVPIVLIYTFANNSTNIKKFMGNHSYV 47


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.139   0.392    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       76        52   0.00091  102 3  11 22  0.37    27
                                                     29  0.47    26


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  336 (36 KB)
  Total size of DFA:  55 KB (2058 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  5.37u 0.12s 5.49t   Elapsed:  00:00:00
  Total cpu time:  5.37u 0.12s 5.49t   Elapsed:  00:00:00
  Start:  Fri May 10 04:49:35 2013   End:  Fri May 10 04:49:35 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	76
PF09803	80	DUF2346: Uncharacterized conserved protein (DUF234	99.94
KOG4702	77	consensus Uncharacterized conserved protein [Funct	99.64

>PF09803 DUF2346: Uncharacterized conserved protein (DUF2346); InterPro: IPR018625 Members of this family of proteins have no known function

Probab=99.94  E-value=1.8e-27  Score=151.67  Aligned_cols=68  Identities=35%  Similarity=0.553  Sum_probs=62.7

Q ss_pred             CCcchhhhhhhhhhhhhhhheeeeeccCchhhhhhhcCcceeeCCCCCCCCCChHHHHHHHHHHHHhhhcC
Q 035020            6 TSKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYVEYPPEGPRPPSPEELREMARELARNKNIR   76 (76)
Q Consensus         6 ~~~~~LEifKFg~Yl~fPI~~my~fg~~~d~~~~~~~~~~~~~~Ppe~~~~~~p~E~~ei~~Elar~r~~r   76 (76)
                      +.||+||||||||||+||||+|||| ||||++++++.++++.+|||+++.+  ++|++++++++.++|++|
T Consensus         1 Mgg~~LEvfKfg~Yv~fPI~~~~~f-N~pe~f~~~v~~~~~~~~ppe~~~~--~~ele~~~~~~~~k~~~r   68 (80)
T PF09803_consen    1 MGGWNLEVFKFGMYVFFPIGMFYYF-NQPEWFEKWVIKRKRELYPPENEEI--REELEEFKEELRKKREER   68 (80)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhc-CCcHHHHHHhHHHhcccCCCCCccc--HHHHHHHHHHHHHHHHHH
Confidence            4689999999999999999998877 9999999999999999999998874  899999999999888764

>KOG4702 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.64  E-value=4.4e-17  Score=103.36  Aligned_cols=61  Identities=25%  Similarity=0.382  Sum_probs=53.5

Q ss_pred             CCcchhhhhhhhhhhhhhhheeeeeccCchhhhhhhcCcceeeCCCCCCCCCChHHHHHHHHHH
Q 035020            6 TSKGILEIAKFGIYVGVPVFLMYTFANNTKNIQKFMGNRSYVEYPPEGPRPPSPEELREMAREL   69 (76)
Q Consensus         6 ~~~~~LEifKFg~Yl~fPI~~my~fg~~~d~~~~~~~~~~~~~~Ppe~~~~~~p~E~~ei~~El   69 (76)
                      +.+|.||++||++|++|||++++.| |||++++.++.+++++.|||++..+  -+|.++.-+|.
T Consensus         1 MG~wkLE~~rm~~y~tFPV~~Fwlf-NQpe~Fee~v~~~krel~ppe~~~~--~EE~~~~lRe~   61 (77)
T KOG4702|consen    1 MGGWKLETGRMLLYITFPVGAFWLF-NQPEIFEEFVRGYKRELSPPEATKR--KEEYENFLREQ   61 (77)
T ss_pred             CCceeeehhhhhhhhhhhHHHHHHc-cChHHHHHHHHhccccCCChHHHhh--HHHHHHHHHHH
Confidence            3579999999999999999997755 9999999999999999999998876  47777766665

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	76
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 37.5 bits (86), Expect = 1e-04
 Identities = 16/63 (25%), Positives = 21/63 (33%), Gaps = 14/63 (22%)

Query: 25  FLMYTFANNTKNIQKFMGNRSYVEY-----------PPEG-PRPPSPEELREMARELARN 72
           FLM      T+  Q  M  R Y+E                  R     +LR+   EL   
Sbjct: 93  FLMSPIK--TEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPA 150

Query: 73  KNI 75
           KN+
Sbjct: 151 KNV 153

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00