Citrus Sinensis ID: 035101

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70---
Protein Sequence
MARRLADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQED
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
marrladpeEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQED
Flexible Loop (DISEMBL)
marrladpeeelRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQED
Low Complexity Region (SEG)
MARRLADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQED
Disordered region (IsUnstruct)
***********LRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLY******************
Disordered Region (DISOPRED)
******D*EEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSS*********EELLQ**
Disordered Region (DISEMBL)
**********ELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQED
Disordered Region (DISPRO)
****LADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMI*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MARRLADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQED
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	73	2.2.26 [Sep-21-2011]
Q9SE83	914	Dynamin-2A OS=Arabidopsis	yes	no	1.0	0.079	0.767	2e-26
Q9LQ55	920	Dynamin-2B OS=Arabidopsis	no	no	1.0	0.079	0.753	3e-26
Q8LF21	614	Dynamin-related protein 1	no	no	0.931	0.110	0.371	6e-07
Q9FNX5	624	Dynamin-related protein 1	no	no	0.890	0.104	0.384	1e-06
Q39828	610	Dynamin-related protein 5	no	no	0.849	0.101	0.354	1e-05
Q8S3C9	612	Dynamin-related protein 1	no	no	0.890	0.106	0.323	2e-05
Q39821	610	Dynamin-related protein 1	no	no	0.849	0.101	0.338	4e-05
P42697	610	Dynamin-related protein 1	no	no	0.849	0.101	0.354	5e-05
Q84XF3	610	Dynamin-related protein 1	no	no	0.849	0.101	0.354	5e-05

>sp|Q9SE83|DRP2A_ARATH Dynamin-2A OS=Arabidopsis thaliana GN=DRP2A PE=1 SV=2

 Score =  117 bits (294), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 56/73 (76%), Positives = 63/73 (86%)

Query: 1   MARRLADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNA 60
           M R+  DPEEELRW+SQ+V GYVEAVLNSLAANVPKA+VLCQVEKAKEDMLNQLYSS++A
Sbjct: 719 MVRKPIDPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSISA 778

Query: 61  QSTAMIEELLQED 73
                IE L+QED
Sbjct: 779 IGNERIESLIQED 791

Microtubule-associated force-producing protein involved in clathrin-mediated vesicle trafficking from the trans-Golgi network to the central vacuole. Able to bind and hydrolyze GTP. Binds specifically to phosphatidylinositol 3-phosphate (PtdIns3P).
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 6EC: .EC: 5EC: .EC: 5

>sp|Q9LQ55|DRP2B_ARATH Dynamin-2B OS=Arabidopsis thaliana GN=DRP2B PE=1 SV=2

 Score =  117 bits (292), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 55/73 (75%), Positives = 63/73 (86%)

Query: 1   MARRLADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNA 60
           M R+  DPEEELRW+SQ+V GYVEAVLNSLAANVPKA+VLCQVEK+KEDMLNQLYSS++A
Sbjct: 726 MVRKPVDPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKSKEDMLNQLYSSISA 785

Query: 61  QSTAMIEELLQED 73
                IE L+QED
Sbjct: 786 IGNERIESLIQED 798

Putative microtubule-associated force-producing protein, able to bind and hydrolyze GTP.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q8LF21|DRP1C_ARATH Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1 SV=2

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)

Query: 6   ADP--EEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQST 63
           ADP  +   R I   VS Y+  V ++L  ++PKA+V CQV +AK  +LN  Y+ V  +  
Sbjct: 515 ADPYSDNHFRKIGSNVSAYINMVCDTLRNSLPKAVVYCQVREAKRSLLNFFYAQVGRKEK 574

Query: 64  AMIEELLQED 73
             +  +L ED
Sbjct: 575 EKLGAMLDED 584

Microtubule-associated force-producing protein that is targeted to the growing edges of the cell plate during cytokinesis. Plays also a major role in plasma membrane maintenance during pollen maturation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 37/65 (56%)

Query: 9   EEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEE 68
           +   R I+  VS YV  V ++L   +PKA V CQV +AK  +LN  YS ++ +    + +
Sbjct: 529 DGHFRRIASNVSAYVNMVSDTLRNTIPKACVYCQVRQAKLALLNYFYSQISKREGKQLGQ 588

Query: 69  LLQED 73
           LL ED
Sbjct: 589 LLDED 593

Microtubule-associated force-producing protein that is targeted to the tubulo-vesicular network of the forming cell plate during cytokinesis. Plays also a major role in plasma membrane maintenance and cell wall integrity with an implication in vesicular trafficking, polar cell expansion, and other aspects of plant growth and development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A OS=Glycine max PE=2 SV=1

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 34/62 (54%)

Query: 12  LRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQ 71
           LR I   +  YV  V  +L  ++PK+IV CQV +AK  +L+  ++ +    T  +  LL 
Sbjct: 518 LRRIGTTILSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELGKMETKRLSSLLN 577

Query: 72  ED 73
           ED
Sbjct: 578 ED 579

Microtubule-associated force-producing protein.

Glycine max (taxid: 3847)

>sp|Q8S3C9|DRP1D_ARATH Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2 SV=2

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 37/65 (56%)

Query: 9   EEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEE 68
           +   R I+  V+ Y++ V  +L   +PKA+V CQV +AK  +LN  Y+ ++      + +
Sbjct: 517 DGHFRKIASNVAAYIKMVAETLVNTIPKAVVHCQVRQAKLSLLNYFYAQISQSQGKRLGQ 576

Query: 69  LLQED 73
           LL E+
Sbjct: 577 LLDEN 581

Putative microtubule-associated force-producing protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39821|SDLCA_SOYBN Dynamin-related protein 12A OS=Glycine max PE=1 SV=1

 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 33/62 (53%)

Query: 12  LRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQ 71
           LR I   +  YV  V  +L  ++PK+IV CQV +AK  +L+  ++ +       +  LL 
Sbjct: 518 LRRIGTTILSYVNMVCATLRHSIPKSIVYCQVREAKRSLLDHFFTELGKMEIKRLSSLLN 577

Query: 72  ED 73
           ED
Sbjct: 578 ED 579

Microtubule-associated force-producing protein that is targeted to the forming cell plate during cytokinesis. May be involved in attaching Golgi-derived vesicles to microtubules which direct vesicles to the forming cell plate during cytokinesis. Possesses intrinsic GTPase activity in vitro.

Glycine max (taxid: 3847)

>sp|P42697|DRP1A_ARATH Dynamin-related protein 1A OS=Arabidopsis thaliana GN=DRP1A PE=1 SV=3

 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 32/62 (51%)

Query: 12  LRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQ 71
           LR I   V  YV  V   L  ++PK+IV CQV +AK  +L+  ++ +       +  LL 
Sbjct: 518 LRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDHFFAELGTMDMKRLSSLLN 577

Query: 72  ED 73
           ED
Sbjct: 578 ED 579

Microtubule-associated force-producing protein that is targeted to the forming cell plate during cytokinesis. Plays also a major role in plasma membrane maintenance and cell wall integrity with implications in vesicular trafficking, polar cell expansion, vascular formation, and other aspects of plant growth and development. Has a GTPase activity.

Arabidopsis thaliana (taxid: 3702)

>sp|Q84XF3|DRP1B_ARATH Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2 SV=1

 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 35/62 (56%)

Query: 12  LRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQ 71
           LR I   V  YV  V   L  ++PK+IV CQV +AK  +L+  ++ +  +  + + +LL 
Sbjct: 518 LRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDIFFTELGQKEMSKLSKLLD 577

Query: 72  ED 73
           ED
Sbjct: 578 ED 579

Putative microtubule-associated force-producing protein.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	73
224127734	920	predicted protein [Populus trichocarpa]	1.0	0.079	0.890	2e-30
225465253	920	PREDICTED: dynamin-2B [Vitis vinifera] g	1.0	0.079	0.890	4e-30
326512484	226	predicted protein [Hordeum vulgare subsp	1.0	0.323	0.876	5e-30
413952529	417	hypothetical protein ZEAMMB73_427354 [Ze	1.0	0.175	0.876	8e-30
242062590	921	hypothetical protein SORBIDRAFT_04g02851	1.0	0.079	0.890	9e-30
223947541	873	unknown [Zea mays]	1.0	0.083	0.876	1e-29
357143982	921	PREDICTED: dynamin-2B-like [Brachypodium	1.0	0.079	0.876	1e-29
226528274	913	dynamin-2A [Zea mays] gi|195656737|gb|AC	1.0	0.079	0.876	1e-29
223943377	913	unknown [Zea mays] gi|413944223|gb|AFW76	1.0	0.079	0.876	1e-29
356563206	914	PREDICTED: dynamin-2B-like [Glycine max]	1.0	0.079	0.876	2e-29

>gi|224127734|ref|XP_002329164.1| predicted protein [Populus trichocarpa] gi|222870945|gb|EEF08076.1| predicted protein [Populus trichocarpa]

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/73 (89%), Positives = 70/73 (95%)

Query: 1   MARRLADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNA 60
           MARR ADPEEELRW+SQ+V GYVEAVLNSLAANVPKA+VLCQVEKAKEDMLNQLYSS++A
Sbjct: 721 MARRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSISA 780

Query: 61  QSTAMIEELLQED 73
           QSTA IEELLQED
Sbjct: 781 QSTARIEELLQED 793

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225465253|ref|XP_002268311.1| PREDICTED: dynamin-2B [Vitis vinifera] gi|297739464|emb|CBI29646.3| unnamed protein product [Vitis vinifera]

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 65/73 (89%), Positives = 70/73 (95%)

Query: 1   MARRLADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNA 60
           MARR ADPEEELRW+SQ+V GYVEAVLNSLAANVPKA+VLCQVEK+KEDMLNQLYSSV+A
Sbjct: 723 MARRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKSKEDMLNQLYSSVSA 782

Query: 61  QSTAMIEELLQED 73
           QSTA IEELLQED
Sbjct: 783 QSTARIEELLQED 795

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326512484|dbj|BAJ99597.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 64/73 (87%), Positives = 69/73 (94%)

Query: 1   MARRLADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNA 60
           MARR ADPEEELRW+SQ+V GYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSS+++
Sbjct: 38  MARRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISS 97

Query: 61  QSTAMIEELLQED 73
           QS A IEELLQED
Sbjct: 98  QSNARIEELLQED 110

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413952529|gb|AFW85178.1| hypothetical protein ZEAMMB73_427354 [Zea mays]

 Score =  134 bits (337), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 64/73 (87%), Positives = 68/73 (93%)

Query: 1   MARRLADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNA 60
           MARR ADPEEELRW+SQ+V GYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSS++ 
Sbjct: 230 MARRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISG 289

Query: 61  QSTAMIEELLQED 73
           QS A IEELLQED
Sbjct: 290 QSNAKIEELLQED 302

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242062590|ref|XP_002452584.1| hypothetical protein SORBIDRAFT_04g028510 [Sorghum bicolor] gi|241932415|gb|EES05560.1| hypothetical protein SORBIDRAFT_04g028510 [Sorghum bicolor]

 Score =  134 bits (336), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 65/73 (89%), Positives = 69/73 (94%)

Query: 1   MARRLADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNA 60
           MARR ADPEEELRW+SQ+V GYVEAVLNSLAANVPKAIVLCQVEK+KEDMLNQLYSSV+A
Sbjct: 735 MARRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKSKEDMLNQLYSSVSA 794

Query: 61  QSTAMIEELLQED 73
           QS A IEELLQED
Sbjct: 795 QSNAKIEELLQED 807

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|223947541|gb|ACN27854.1| unknown [Zea mays]

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 64/73 (87%), Positives = 68/73 (93%)

Query: 1   MARRLADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNA 60
           MARR ADPEEELRW+SQ+V GYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSS++ 
Sbjct: 686 MARRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISG 745

Query: 61  QSTAMIEELLQED 73
           QS A IEELLQED
Sbjct: 746 QSNAKIEELLQED 758

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357143982|ref|XP_003573124.1| PREDICTED: dynamin-2B-like [Brachypodium distachyon]

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 64/73 (87%), Positives = 69/73 (94%)

Query: 1   MARRLADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNA 60
           MARR ADPEEELRW+SQ+V GYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSS+++
Sbjct: 732 MARRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISS 791

Query: 61  QSTAMIEELLQED 73
           QS A IEELLQED
Sbjct: 792 QSNAKIEELLQED 804

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226528274|ref|NP_001152484.1| dynamin-2A [Zea mays] gi|195656737|gb|ACG47836.1| dynamin-2A [Zea mays]

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 64/73 (87%), Positives = 68/73 (93%)

Query: 1   MARRLADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNA 60
           MARR ADPEEELRW+SQ+V GYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSS++ 
Sbjct: 726 MARRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISG 785

Query: 61  QSTAMIEELLQED 73
           QS A IEELLQED
Sbjct: 786 QSNAKIEELLQED 798

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|223943377|gb|ACN25772.1| unknown [Zea mays] gi|413944223|gb|AFW76872.1| dynamin-2A [Zea mays]

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 64/73 (87%), Positives = 68/73 (93%)

Query: 1   MARRLADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNA 60
           MARR ADPEEELRW+SQ+V GYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSS++ 
Sbjct: 726 MARRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISG 785

Query: 61  QSTAMIEELLQED 73
           QS A IEELLQED
Sbjct: 786 QSNAKIEELLQED 798

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563206|ref|XP_003549855.1| PREDICTED: dynamin-2B-like [Glycine max]

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/73 (87%), Positives = 70/73 (95%)

Query: 1   MARRLADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNA 60
           MAR+ ADPEEELRW+SQ+V GYVEAVLNSLAANVPKA+VLCQVEKAKEDMLNQLYSSV+A
Sbjct: 721 MARKPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSVSA 780

Query: 61  QSTAMIEELLQED 73
           QS+A IEELLQED
Sbjct: 781 QSSAKIEELLQED 793

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	73
TAIR|locus:2012763	914	ADL6 "dynamin-like protein 6"	1.0	0.079	0.767	9.4e-24
TAIR|locus:2202847	920	DL3 "dynamin-like 3" [Arabidop	1.0	0.079	0.753	1.6e-23
TAIR|locus:2006777	614	DL1C "DYNAMIN-like 1C" [Arabid	0.931	0.110	0.371	9.1e-07
TAIR|locus:2101482	624	DL1E "DYNAMIN-like 1E" [Arabid	0.835	0.097	0.409	3.2e-06
TAIR|locus:2042371	612	DL1D "DYNAMIN-like 1D" [Arabid	0.835	0.099	0.344	2.3e-05
TAIR|locus:2076780	610	DL1B "DYNAMIN-like 1B" [Arabid	0.849	0.101	0.354	6e-05
TAIR|locus:2165805	610	DL1 "dynamin-like protein" [Ar	0.849	0.101	0.354	6e-05
UNIPROTKB|Q39821	610	Q39821 "Dynamin-related protei	0.849	0.101	0.338	0.00013

TAIR|locus:2012763 ADL6 "dynamin-like protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 284 (105.0 bits), Expect = 9.4e-24, P = 9.4e-24
 Identities = 56/73 (76%), Positives = 63/73 (86%)

Query:     1 MARRLADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNA 60
             M R+  DPEEELRW+SQ+V GYVEAVLNSLAANVPKA+VLCQVEKAKEDMLNQLYSS++A
Sbjct:   719 MVRKPIDPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSISA 778

Query:    61 QSTAMIEELLQED 73
                  IE L+QED
Sbjct:   779 IGNERIESLIQED 791

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006896 "Golgi to vacuole transport" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2202847 DL3 "dynamin-like 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 1.6e-23, P = 1.6e-23
 Identities = 55/73 (75%), Positives = 63/73 (86%)

Query:     1 MARRLADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNA 60
             M R+  DPEEELRW+SQ+V GYVEAVLNSLAANVPKA+VLCQVEK+KEDMLNQLYSS++A
Sbjct:   726 MVRKPVDPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKSKEDMLNQLYSSISA 785

Query:    61 QSTAMIEELLQED 73
                  IE L+QED
Sbjct:   786 IGNERIESLIQED 798

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009504 "cell plate" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0030276 "clathrin binding" evidence=IDA

GO:0045334 "clathrin-coated endocytic vesicle" evidence=IDA

GO:0072583 "clathrin-mediated endocytosis" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2006777 DL1C "DYNAMIN-like 1C" [Arabidopsis thaliana (taxid:3702)]

 Score = 123 (48.4 bits), Expect = 9.1e-07, P = 9.1e-07
 Identities = 26/70 (37%), Positives = 39/70 (55%)

Query:     6 ADP--EEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQST 63
             ADP  +   R I   VS Y+  V ++L  ++PKA+V CQV +AK  +LN  Y+ V  +  
Sbjct:   515 ADPYSDNHFRKIGSNVSAYINMVCDTLRNSLPKAVVYCQVREAKRSLLNFFYAQVGRKEK 574

Query:    64 AMIEELLQED 73
               +  +L ED
Sbjct:   575 EKLGAMLDED 584

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0009504 "cell plate" evidence=IDA

GO:0010152 "pollen maturation" evidence=IMP

GO:0000266 "mitochondrial fission" evidence=IMP

GO:0007005 "mitochondrion organization" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005938 "cell cortex" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0042732 "D-xylose metabolic process" evidence=RCA

TAIR|locus:2101482 DL1E "DYNAMIN-like 1E" [Arabidopsis thaliana (taxid:3702)]

 Score = 118 (46.6 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 25/61 (40%), Positives = 36/61 (59%)

Query:    13 RWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQE 72
             R I+  VS YV  V ++L   +PKA V CQV +AK  +LN  YS ++ +    + +LL E
Sbjct:   533 RRIASNVSAYVNMVSDTLRNTIPKACVYCQVRQAKLALLNYFYSQISKREGKQLGQLLDE 592

Query:    73 D 73
             D
Sbjct:   593 D 593

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0016192 "vesicle-mediated transport" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0050832 "defense response to fungus" evidence=RCA;IMP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

TAIR|locus:2042371 DL1D "DYNAMIN-like 1D" [Arabidopsis thaliana (taxid:3702)]

 Score = 110 (43.8 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query:    13 RWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQE 72
             R I+  V+ Y++ V  +L   +PKA+V CQV +AK  +LN  Y+ ++      + +LL E
Sbjct:   521 RKIASNVAAYIKMVAETLVNTIPKAVVHCQVRQAKLSLLNYFYAQISQSQGKRLGQLLDE 580

Query:    73 D 73
             +
Sbjct:   581 N 581

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

TAIR|locus:2076780 DL1B "DYNAMIN-like 1B" [Arabidopsis thaliana (taxid:3702)]

 Score = 106 (42.4 bits), Expect = 6.0e-05, P = 6.0e-05
 Identities = 22/62 (35%), Positives = 35/62 (56%)

Query:    12 LRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQ 71
             LR I   V  YV  V   L  ++PK+IV CQV +AK  +L+  ++ +  +  + + +LL 
Sbjct:   518 LRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDIFFTELGQKEMSKLSKLLD 577

Query:    72 ED 73
             ED
Sbjct:   578 ED 579

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

TAIR|locus:2165805 DL1 "dynamin-like protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 106 (42.4 bits), Expect = 6.0e-05, P = 6.0e-05
 Identities = 22/62 (35%), Positives = 32/62 (51%)

Query:    12 LRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQ 71
             LR I   V  YV  V   L  ++PK+IV CQV +AK  +L+  ++ +       +  LL 
Sbjct:   518 LRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDHFFAELGTMDMKRLSSLLN 577

Query:    72 ED 73
             ED
Sbjct:   578 ED 579

GO:0003924 "GTPase activity" evidence=IEA;IDA

GO:0005525 "GTP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0000911 "cytokinesis by cell plate formation" evidence=IGI

GO:0009504 "cell plate" evidence=IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=IGI

GO:0009920 "cell plate formation involved in plant-type cell wall biogenesis" evidence=IGI

GO:0010091 "trichome branching" evidence=IMP

GO:0005773 "vacuole" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005874 "microtubule" evidence=IDA

GO:0010051 "xylem and phloem pattern formation" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0043424 "protein histidine kinase binding" evidence=IPI

GO:0030276 "clathrin binding" evidence=IDA

GO:0072583 "clathrin-mediated endocytosis" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0032880 "regulation of protein localization" evidence=RCA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

UNIPROTKB|Q39821 Q39821 "Dynamin-related protein 12A" [Glycine max (taxid:3847)]

 Score = 103 (41.3 bits), Expect = 0.00013, P = 0.00013
 Identities = 21/62 (33%), Positives = 33/62 (53%)

Query:    12 LRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQ 71
             LR I   +  YV  V  +L  ++PK+IV CQV +AK  +L+  ++ +       +  LL 
Sbjct:   518 LRRIGTTILSYVNMVCATLRHSIPKSIVYCQVREAKRSLLDHFFTELGKMEIKRLSSLLN 577

Query:    72 ED 73
             ED
Sbjct:   578 ED 579


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.311   0.124   0.328    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       73        73   0.00091  102 3  10 23  0.37    29
                                                     29  0.45    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  549 (58 KB)
  Total size of DFA:  115 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.83u 0.10s 11.93t   Elapsed:  00:00:07
  Total cpu time:  11.83u 0.10s 11.93t   Elapsed:  00:00:07
  Start:  Fri May 10 05:36:56 2013   End:  Fri May 10 05:37:03 2013

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SE83	DRP2A_ARATH	3, ., 6, ., 5, ., 5	0.7671	1.0	0.0798	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	73
pfam02212	90	pfam02212, GED, Dynamin GTPase effector domain	3e-07
smart00302	92	smart00302, GED, Dynamin GTPase effector domain	0.003

>gnl|CDD|202159 pfam02212, GED, Dynamin GTPase effector domain

 Score = 42.9 bits (102), Expect = 3e-07
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)

Query: 11 ELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELL 70
          E+  I + +  Y   V   +A  +PKAI+   V ++KE +  +L   +       ++ELL
Sbjct: 3  EVEEIRRLLKSYFNIVRKRIADQIPKAIMYFLVNESKESLQKELLQLL--YKKEDLDELL 60

Query: 71 QED 73
          +ED
Sbjct: 61 KED 63

Length = 90

>gnl|CDD|128597 smart00302, GED, Dynamin GTPase effector domain

 Score = 32.6 bits (75), Expect = 0.003
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)

Query: 11 ELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELL 70
          EL  I   V  Y   V  +LA  VPKAI+   V ++K+ + N+L +        +++ELL
Sbjct: 5  ELEEIKSLVKSYFTIVSKTLADQVPKAIMYLLVNESKDSLQNELLAL--LYKEELLDELL 62

Query: 71 QED 73
          +ED
Sbjct: 63 EED 65

Length = 92

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	73
smart00302	92	GED Dynamin GTPase effector domain.	99.85
PF02212	92	GED: Dynamin GTPase effector domain; InterPro: IPR	99.72
KOG0446	657	consensus Vacuolar sorting protein VPS1, dynamin,	99.53

>smart00302 GED Dynamin GTPase effector domain

Probab=99.85  E-value=5e-21  Score=122.11  Aligned_cols=63  Identities=35%  Similarity=0.528  Sum_probs=60.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHhhhcHHHHHHhhccC
Q 035101            9 EEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQED   73 (73)
Q Consensus         9 d~~lr~i~~~V~sYv~~V~~tL~~sVPKAiVhcqV~~aKr~Ll~~l~~~l~~~e~~ql~~LL~ED   73 (73)
                      +.+++.|++++.|||++|+++++|+|||||+||+|+.++++|+++|+++||+.+.  +++||+||
T Consensus         3 ~~~~~~i~~lv~sYf~iv~k~i~D~VPKaI~~~lv~~~~~~lq~~L~~~L~~~~~--~~~LL~E~   65 (92)
T smart00302        3 DSELEEIKSLVKSYFTIVSKTLADQVPKAIMYLLVNESKDSLQNELLALLYKEEL--LDELLEED   65 (92)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCccc--HHHHHcCC
Confidence            4688999999999999999999999999999999999999999999999999877  99999997

>PF02212 GED: Dynamin GTPase effector domain; InterPro: IPR003130 Dynamin GTPase effector domain found in proteins related to dynamin

Probab=99.72  E-value=1.5e-17  Score=105.16  Aligned_cols=63  Identities=33%  Similarity=0.491  Sum_probs=58.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHhhhcHHHHHHhhccC
Q 035101            9 EEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQED   73 (73)
Q Consensus         9 d~~lr~i~~~V~sYv~~V~~tL~~sVPKAiVhcqV~~aKr~Ll~~l~~~l~~~e~~ql~~LL~ED   73 (73)
                      +.+.+.|...+.||+++|++++.|+|||||+||+|+.+++.|+++++++++..+.  +++||.||
T Consensus         3 ~~~~~~i~~~l~aY~~ia~kr~~D~Vpk~I~~~lv~~~~~~L~~~l~~~l~~~~~--~~~Ll~Ed   65 (92)
T PF02212_consen    3 QREVEEIKALLRAYFEIARKRFIDSVPKAIMHFLVNKSKEQLQSELLNELYDEED--LEELLQED   65 (92)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGG--CCCCT--G
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHhccchHH--HHHHHCCC
Confidence            3578899999999999999999999999999999999999999999999999998  89999997

Dynamin is a GTP-hydrolysing protein that is an essential participant in clathrin-mediated endocytosis by cells. It self-assembles into 'collars' in vivo at the necks of invaginated coated pits; the self-assembly of dynamin being coordinated by the GTPase domain. Mutation studies indicate that dynamin functions as a molecular regulator of receptor-mediated endocytosis [].; GO: 0003924 GTPase activity, 0005525 GTP binding; PDB: 3ZYS_B 3SZR_A 3LJB_B 3T35_C 3T34_A 2X2F_D 2X2E_D 3SNH_A 3ZYC_D 3ZVR_A.

>KOG0446 consensus Vacuolar sorting protein VPS1, dynamin, and related proteins [Intracellular trafficking, secretion, and vesicular transport; General function prediction only]

Probab=99.53  E-value=3.3e-14  Score=116.09  Aligned_cols=67  Identities=30%  Similarity=0.360  Sum_probs=62.4

Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHhhhcHHHHHHhhccC
Q 035101            6 ADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQED   73 (73)
Q Consensus         6 ~~~d~~lr~i~~~V~sYv~~V~~tL~~sVPKAiVhcqV~~aKr~Ll~~l~~~l~~~e~~ql~~LL~ED   73 (73)
                      .+.+.|.++|++++.+|++||+++|+|+||||||||||+.+|++|++.|+++|++ ..++++.||+||
T Consensus       560 ~~~~~~~~~i~~~~~sY~~iv~~~i~d~vpk~i~~~lv~~~k~~l~~~l~~~L~~-~~~~~~~ll~E~  626 (657)
T KOG0446|consen  560 KRECKETEEISSCPESYLNIVSDKLVDTVPKALNHELLNEFKDDLPNELDQRLYA-GDEQLESLLKED  626 (657)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHccC
Confidence            3455699999999999999999999999999999999999999999999999999 477799999997

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	73
3zvr_A	772	Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mito	6e-12

>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A Length = 772

 Score = 57.9 bits (139), Expect = 6e-12
 Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 1   MARRLADPEEELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNA 60
           M       E ++  I   V  Y+  V  ++   +PK I+   +   KE + ++L +++  
Sbjct: 668 MHSMDPQLERQVETIRNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSELLANL-- 725

Query: 61  QSTAMIEELLQED 73
            S      L++E 
Sbjct: 726 YSCGDQNTLMEES 738

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	73
3szr_A	608	Interferon-induced GTP-binding protein MX1; interf	99.44
3zvr_A	772	Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mito	99.43
3ljb_A	271	Interferon-induced GTP-binding protein MX1; four-h	99.23

>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B

Probab=99.44  E-value=5.5e-14  Score=110.01  Aligned_cols=60  Identities=15%  Similarity=0.265  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHhhhcHHHHHHhhccC
Q 035101           12 LRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQED   73 (73)
Q Consensus        12 lr~i~~~V~sYv~~V~~tL~~sVPKAiVhcqV~~aKr~Ll~~l~~~l~~~e~~ql~~LL~ED   73 (73)
                      .+.|...|.||+++|+++++|+|||||+||+|+.+++.|++.+++.|++++.  +++||+||
T Consensus       520 ~~ei~~~l~sY~~iv~~~~~D~vP~~I~~~lv~~~~~~lq~~l~~~l~~~~~--~~~ll~E~  579 (608)
T 3szr_A          520 MEEIFQHLMAYHQEASKRISSHIPLIIQFFMLQTYGQQLQKAMLQLLQDKDT--YSWLLKER  579 (608)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTTCHHH--HHHHTCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcchh--HHHHhCCC
Confidence            4569999999999999999999999999999999999999999999998777  99999997

>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A

Probab=99.43  E-value=1.1e-13  Score=113.29  Aligned_cols=58  Identities=21%  Similarity=0.337  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHhhhcHHHHHHhhccC
Q 035101           14 WISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQED   73 (73)
Q Consensus        14 ~i~~~V~sYv~~V~~tL~~sVPKAiVhcqV~~aKr~Ll~~l~~~l~~~e~~ql~~LL~ED   73 (73)
                      -|..+|.||++||+++++|.|||||||++||.+|+.+.+.|.++||+.+.  +.+||+|+
T Consensus       681 ~~~~l~~sy~~iv~k~~~d~~pk~im~~~vn~~k~~~~~el~~~ly~~~~--~~~lm~Es  738 (772)
T 3zvr_A          681 TIRNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSELLANLYSCGD--QNTLMEES  738 (772)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTHHHHHHHTCC--TTTTTCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC--HHHHHhcC
Confidence            58999999999999999999999999999999999999999999999988  88999985

>3ljb_A Interferon-induced GTP-binding protein MX1; four-helix-bundle, antiviral protein; 2.40A {Homo sapiens}

Probab=99.23  E-value=1.2e-11  Score=91.10  Aligned_cols=65  Identities=14%  Similarity=0.250  Sum_probs=59.1

Q ss_pred             CCh-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHhhhcHHHHHHhhccC
Q 035101            7 DPE-EELRWISQKVSGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSVNAQSTAMIEELLQED   73 (73)
Q Consensus         7 ~~d-~~lr~i~~~V~sYv~~V~~tL~~sVPKAiVhcqV~~aKr~Ll~~l~~~l~~~e~~ql~~LL~ED   73 (73)
                      |+. +-++-|...+.||+++|+++|+|.|||+|+|++|+.++..|+..++..|+.++.  +..||.||
T Consensus       203 ~~~~~~~~Ei~~~l~sYf~i~~~rl~d~IP~~I~~~ll~~~~~~lQ~~ml~~l~~~~~--~~~LL~E~  268 (271)
T 3ljb_A          203 SATDSSMEEIFQHLMAYHQEASKRISSHIPLIIQFFMLQTYGQQLQKAMLQLLQDKDT--YSWLLKER  268 (271)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTTSCGGG--HHHHTCCC
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHhchhh--HHHHhcCC
Confidence            344 668889999999999999999999999999999999999999999999999998  99999997

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00