Citrus Sinensis ID: 035138

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--
Protein Sequence
MGSRVTLRTKGKGVKGAKASEEKSMVDSFKEWSTWTMKKAKVVTHYGFIPLIIIIGMNSDPKPQVYQLLSPV
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHEEEEEEccEEEEEEEEcccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccEEccccccccccHHccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccHHHHcccc
Coil and Loop (DISEMBL)
mgsrvtlrtkgkgvkgakasEEKSMVDSFKEWSTWTMKKAKVVTHYGFIPLIIIIgmnsdpkpqvyqllspv
Flexible Loop (DISEMBL)
mgsrvtlrtkgkgvkgakaseeksmvDSFKEWSTWTMKKAKVVTHYGFIPLIIIIGMNSDPKPQVYQLLSPV
Low Complexity Region (SEG)
MGSRVTLRTKGKGVKGAKASEEKSMVDSFKEWSTWTMKKAKVVTHYGFIPLIIIIGMNSDPKPQVYQLLSPV
Disordered region (IsUnstruct)
****************************FKEWSTWTMKKAKVVTHYGFIPLIIIIGMN**************
Disordered Region (DISOPRED)
******************************EWSTWTMKKAKVVTHYGFIPLIIIIGMNSDPKPQVYQLLSPV
Disordered Region (DISEMBL)
****************************FKEWSTWTMKKAKVVTHYGFIPLIIIIGMNSDPKPQVYQLLSPV
Disordered Region (DISPRO)
************************MVDSFKEWSTWTMKKAKVVTHYGFIPLIIIIGMNSDPKPQVYQ*LS**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGSRVTLRTKGKGVKGAKASEEKSMVDSFKEWSTWTMKKAKVVTHYGFIPLIIIIGMNSDPKPQVYQLLSPV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	72	2.2.26 [Sep-21-2011]
Q9ASY8	75	Mitochondrial import rece	yes	no	0.722	0.693	0.692	5e-17
Q3ECI7	77	Mitochondrial import rece	no	no	0.611	0.571	0.75	3e-15
O82067	72	Mitochondrial import rece	N/A	no	0.597	0.597	0.813	8e-15

>sp|Q9ASY8|TOM71_ARATH Mitochondrial import receptor subunit TOM7-1 OS=Arabidopsis thaliana GN=TOM7-1 PE=1 SV=1

 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 36/52 (69%), Positives = 45/52 (86%)

Query: 21 EEKSMVDSFKEWSTWTMKKAKVVTHYGFIPLIIIIGMNSDPKPQVYQLLSPV 72
          ++KS  D  KEW+ W++KKAKVVTHYGFIPL+I +GMNSDPKP ++QLLSPV
Sbjct: 24 DDKSKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVGMNSDPKPHLFQLLSPV 75

Seems to act as a modulator of the dynamics of the mitochondrial protein transport machinery. Seems to promote the dissociation of subunits of the outer membrane translocase.
Arabidopsis thaliana (taxid: 3702)

>sp|Q3ECI7|TOM72_ARATH Mitochondrial import receptor subunit TOM7-2 OS=Arabidopsis thaliana GN=TOM7-2 PE=2 SV=1

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 33/44 (75%), Positives = 40/44 (90%)

Query: 29 FKEWSTWTMKKAKVVTHYGFIPLIIIIGMNSDPKPQVYQLLSPV 72
          FK+W+ W+++KAKV THYGFIPLIIIIGMNSDPKP ++ LLSPV
Sbjct: 34 FKDWTNWSLQKAKVATHYGFIPLIIIIGMNSDPKPHLFHLLSPV 77

Seems to act as a modulator of the dynamics of the mitochondrial protein transport machinery. Seems to promote the dissociation of subunits of the outer membrane translocase.

Arabidopsis thaliana (taxid: 3702)

>sp|O82067|TOM7A_SOLTU Mitochondrial import receptor subunit TOM7-1 OS=Solanum tuberosum GN=TOM7-1 PE=3 SV=3

 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 35/43 (81%), Positives = 39/43 (90%)

Query: 30 KEWSTWTMKKAKVVTHYGFIPLIIIIGMNSDPKPQVYQLLSPV 72
          KEW TWT KKAKV+THYGFIPL+IIIGMNS+PKP + QLLSPV
Sbjct: 30 KEWGTWTAKKAKVITHYGFIPLVIIIGMNSEPKPSLSQLLSPV 72

Seems to act as a modulator of the dynamics of the mitochondrial protein transport machinery. Seems to promote the dissociation of subunits of the outer membrane translocase.

Solanum tuberosum (taxid: 4113)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	72
255565250	75	Mitochondrial import receptor subunit TO	1.0	0.96	0.706	2e-24
356513231	72	PREDICTED: mitochondrial import receptor	1.0	1.0	0.680	5e-23
356524000	72	PREDICTED: mitochondrial import receptor	1.0	1.0	0.666	7e-23
224075599	74	predicted protein [Populus trichocarpa]	0.986	0.959	0.739	1e-22
224087331	74	predicted protein [Populus trichocarpa]	0.986	0.959	0.726	1e-22
388511735	70	unknown [Medicago truncatula] gi|3885177	0.972	1.0	0.680	6e-21
225443425	73	PREDICTED: mitochondrial import receptor	1.0	0.986	0.643	2e-20
357459855	133	Mitochondrial import receptor subunit TO	0.958	0.518	0.633	2e-19
388513245	72	unknown [Lotus japonicus]	0.722	0.722	0.807	3e-18
357460445	96	Mitochondrial import receptor subunit TO	0.972	0.729	0.625	9e-18

>gi|255565250|ref|XP_002523617.1| Mitochondrial import receptor subunit TOM7-1, putative [Ricinus communis] gi|223537179|gb|EEF38812.1| Mitochondrial import receptor subunit TOM7-1, putative [Ricinus communis]

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/75 (70%), Positives = 65/75 (86%), Gaps = 3/75 (4%)

Query: 1  MGSRVTLRTKGK---GVKGAKASEEKSMVDSFKEWSTWTMKKAKVVTHYGFIPLIIIIGM 57
          M SRV+L++KGK   G KG+KA EEKS +   KEWSTWT+KKAKV+THYGFIPL++IIGM
Sbjct: 1  MASRVSLKSKGKSSGGAKGSKAMEEKSTIQCLKEWSTWTLKKAKVITHYGFIPLVVIIGM 60

Query: 58 NSDPKPQVYQLLSPV 72
          NS+PKPQ+YQLL+PV
Sbjct: 61 NSEPKPQLYQLLTPV 75

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513231|ref|XP_003525317.1| PREDICTED: mitochondrial import receptor subunit TOM7-1-like isoform 1 [Glycine max] gi|356513233|ref|XP_003525318.1| PREDICTED: mitochondrial import receptor subunit TOM7-1-like isoform 2 [Glycine max]

 Score =  111 bits (278), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 49/72 (68%), Positives = 61/72 (84%)

Query: 1  MGSRVTLRTKGKGVKGAKASEEKSMVDSFKEWSTWTMKKAKVVTHYGFIPLIIIIGMNSD 60
          M SRV+L+ KGK  KG+KA+E++S  +  KEW+TW M+KAKV+THYGFIPL+IIIGMNSD
Sbjct: 1  MASRVSLKAKGKSSKGSKAAEDRSASECLKEWTTWAMRKAKVITHYGFIPLVIIIGMNSD 60

Query: 61 PKPQVYQLLSPV 72
          PKP + QLLSPV
Sbjct: 61 PKPPLSQLLSPV 72

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524000|ref|XP_003530621.1| PREDICTED: mitochondrial import receptor subunit TOM7-1-like isoform 1 [Glycine max] gi|356524002|ref|XP_003530622.1| PREDICTED: mitochondrial import receptor subunit TOM7-1-like isoform 2 [Glycine max]

 Score =  110 bits (276), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 48/72 (66%), Positives = 61/72 (84%)

Query: 1  MGSRVTLRTKGKGVKGAKASEEKSMVDSFKEWSTWTMKKAKVVTHYGFIPLIIIIGMNSD 60
          M SRV+L+ KGK  KG+KA+E++S  +  KEW+TW M+KAKV+THYGFIPL+I+IGMNSD
Sbjct: 1  MASRVSLKAKGKSSKGSKAAEDRSASECLKEWTTWAMRKAKVITHYGFIPLVIVIGMNSD 60

Query: 61 PKPQVYQLLSPV 72
          PKP + QLLSPV
Sbjct: 61 PKPPLSQLLSPV 72

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224075599|ref|XP_002335848.1| predicted protein [Populus trichocarpa] gi|222835808|gb|EEE74243.1| predicted protein [Populus trichocarpa]

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/73 (73%), Positives = 60/73 (82%), Gaps = 2/73 (2%)

Query: 1  MGSRVTLRTKGKGV--KGAKASEEKSMVDSFKEWSTWTMKKAKVVTHYGFIPLIIIIGMN 58
          M SRV+L+TKGK    KGAK  EEKS     KEWSTWT KKAKV+THYGFIP+IIIIGMN
Sbjct: 1  MASRVSLKTKGKSSSGKGAKGVEEKSASQYVKEWSTWTFKKAKVITHYGFIPMIIIIGMN 60

Query: 59 SDPKPQVYQLLSP 71
          S+PKPQ+YQLLSP
Sbjct: 61 SEPKPQIYQLLSP 73

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224087331|ref|XP_002308124.1| predicted protein [Populus trichocarpa] gi|222854100|gb|EEE91647.1| predicted protein [Populus trichocarpa]

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/73 (72%), Positives = 61/73 (83%), Gaps = 2/73 (2%)

Query: 1  MGSRVTLRTKGKGV--KGAKASEEKSMVDSFKEWSTWTMKKAKVVTHYGFIPLIIIIGMN 58
          M SRV+L+TKGK    KGAK  EEKS    FKEWSTW+ KKAKV+THYGFIP+IIIIGMN
Sbjct: 1  MASRVSLKTKGKSSSGKGAKGMEEKSASQYFKEWSTWSFKKAKVITHYGFIPMIIIIGMN 60

Query: 59 SDPKPQVYQLLSP 71
          S+PKPQ++QLLSP
Sbjct: 61 SEPKPQIHQLLSP 73

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388511735|gb|AFK43929.1| unknown [Medicago truncatula] gi|388517719|gb|AFK46921.1| unknown [Medicago truncatula]

 Score =  104 bits (260), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 49/72 (68%), Positives = 59/72 (81%), Gaps = 2/72 (2%)

Query: 1  MGSRVTLRTKGKGVKGAKASEEKSMVDSFKEWSTWTMKKAKVVTHYGFIPLIIIIGMNSD 60
          M  RV+L+ KGK  K  K +E++S++DS KEW+TW MKK KV+ HYGFIPLIIIIGMNSD
Sbjct: 1  MAPRVSLKAKGKSSK--KTAEDRSVIDSVKEWTTWGMKKTKVIAHYGFIPLIIIIGMNSD 58

Query: 61 PKPQVYQLLSPV 72
          PKPQ+ QLLSPV
Sbjct: 59 PKPQISQLLSPV 70

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443425|ref|XP_002269243.1| PREDICTED: mitochondrial import receptor subunit TOM7-1 [Vitis vinifera]

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/73 (64%), Positives = 59/73 (80%), Gaps = 1/73 (1%)

Query: 1  MGSRVTLRTKGKGVKGAK-ASEEKSMVDSFKEWSTWTMKKAKVVTHYGFIPLIIIIGMNS 59
          M SRV+++ KGK +KG+K  SE  S     K+WS W +KKAKV+THYGFIP++IIIGMNS
Sbjct: 1  MASRVSVKGKGKSIKGSKDGSEGHSTAKCLKDWSNWALKKAKVITHYGFIPMVIIIGMNS 60

Query: 60 DPKPQVYQLLSPV 72
          +PKPQ+YQLLSPV
Sbjct: 61 EPKPQLYQLLSPV 73

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357459855|ref|XP_003600208.1| Mitochondrial import receptor subunit TOM7-1 [Medicago truncatula] gi|355489256|gb|AES70459.1| Mitochondrial import receptor subunit TOM7-1 [Medicago truncatula]

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/71 (63%), Positives = 56/71 (78%), Gaps = 2/71 (2%)

Query: 1  MGSRVTLRTKGKGVKGAKASEEKSMVDSFKEWSTWTMKKAKVVTHYGFIPLIIIIGMNSD 60
          M S ++L+ KGK     K +E++S +DS KEW+TW +KK KV+ HYGFIPLIIIIGMNSD
Sbjct: 1  MASTISLKAKGKS--SNKKAEDRSAIDSLKEWTTWGIKKTKVIAHYGFIPLIIIIGMNSD 58

Query: 61 PKPQVYQLLSP 71
          PKPQ+ QLLSP
Sbjct: 59 PKPQLSQLLSP 69

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388513245|gb|AFK44684.1| unknown [Lotus japonicus]

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 42/52 (80%), Positives = 47/52 (90%)

Query: 21 EEKSMVDSFKEWSTWTMKKAKVVTHYGFIPLIIIIGMNSDPKPQVYQLLSPV 72
          EEK+  +  KEW+TWTM+KAKVVTHYGFIPLIIIIGMNSDPKPQ+ QLLSPV
Sbjct: 21 EEKTACECLKEWTTWTMRKAKVVTHYGFIPLIIIIGMNSDPKPQLSQLLSPV 72

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357460445|ref|XP_003600504.1| Mitochondrial import receptor subunit TOM7-1 [Medicago truncatula] gi|355489552|gb|AES70755.1| Mitochondrial import receptor subunit TOM7-1 [Medicago truncatula]

 Score = 94.4 bits (233), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 45/72 (62%), Positives = 55/72 (76%), Gaps = 2/72 (2%)

Query: 1  MGSRVTLRTKGKGVKGAKASEEKSMVDSFKEWSTWTMKKAKVVTHYGFIPLIIIIGMNSD 60
          M   ++L+ KGK  K  K +E++SM+DS KEW TW +KK KV+ H GFIPLIIIIGM SD
Sbjct: 1  MVCMISLKAKGKSSK--KRAEDRSMIDSVKEWKTWGLKKTKVIAHCGFIPLIIIIGMTSD 58

Query: 61 PKPQVYQLLSPV 72
           KPQ+YQLLSPV
Sbjct: 59 QKPQLYQLLSPV 70

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	72
TAIR|locus:505006668	75	AT5G41685 [Arabidopsis thalian	1.0	0.96	0.626	7e-22
TAIR|locus:2024623	77	TOM7-2 "translocase of outer m	1.0	0.935	0.558	5.8e-18
ASPGD|ASPL0000005474	53	AN10828 [Emericella nidulans (	0.597	0.811	0.386	6.3e-05

TAIR|locus:505006668 AT5G41685 [Arabidopsis thaliana (taxid:3702)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 47/75 (62%), Positives = 60/75 (80%)

Query:     1 MGSRVTLRT---KGKGVKGAKASEEKSMVDSFKEWSTWTMKKAKVVTHYGFIPLIIIIGM 57
             M S ++L+    KGKG KGA +S++KS  D  KEW+ W++KKAKVVTHYGFIPL+I +GM
Sbjct:     1 MESTISLKVNKGKGKGSKGASSSDDKSKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVGM 60

Query:    58 NSDPKPQVYQLLSPV 72
             NSDPKP ++QLLSPV
Sbjct:    61 NSDPKPHLFQLLSPV 75

GO:0005741 "mitochondrial outer membrane" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0008565 "protein transporter activity" evidence=ISS

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=IEA

TAIR|locus:2024623 TOM7-2 "translocase of outer membrane 7 kDa subunit 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 43/77 (55%), Positives = 55/77 (71%)

Query:     1 MGSRVTLRTKGKGV--KGAKASEEKSMVDS---FKEWSTWTMKKAKVVTHYGFIPLIIII 55
             M ++ TL+ KGK    KG+ +S   S       FK+W+ W+++KAKV THYGFIPLIIII
Sbjct:     1 MAAKSTLKIKGKAKPSKGSSSSSSSSASSKYKVFKDWTNWSLQKAKVATHYGFIPLIIII 60

Query:    56 GMNSDPKPQVYQLLSPV 72
             GMNSDPKP ++ LLSPV
Sbjct:    61 GMNSDPKPHLFHLLSPV 77

GO:0005741 "mitochondrial outer membrane" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=IEA

ASPGD|ASPL0000005474 AN10828 [Emericella nidulans (taxid:162425)]

 Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 17/44 (38%), Positives = 30/44 (68%)

Query:    30 KEWSTWTMKKAKVVTHYGFIPLIIIIGMN-SDPKPQVYQLLSPV 72
             KE  +  +  ++V  HYG++PLI+ +G   SDP+P +++L SP+
Sbjct:     9 KERISKVIDVSRVAVHYGYLPLILYLGYTYSDPRPSLFKLFSPL 52


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.131   0.387    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       72        72   0.00091  102 3  11 22  0.37    29
                                                     29  0.43    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  560 (60 KB)
  Total size of DFA:  105 KB (2071 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.43u 0.17s 7.60t   Elapsed:  00:00:01
  Total cpu time:  7.43u 0.17s 7.60t   Elapsed:  00:00:01
  Start:  Fri May 10 05:54:16 2013   End:  Fri May 10 05:54:17 2013

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=IEA

GO:0005742 "mitochondrial outer membrane translocase complex" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0015266 "protein channel activity" evidence=IEA

GO:0045040 "protein import into mitochondrial outer membrane" evidence=IEA

GO:0030150 "protein import into mitochondrial matrix" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ASY8	TOM71_ARATH	No assigned EC number	0.6923	0.7222	0.6933	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.4256000101 hypothetical protein (74 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	72
pfam08038	42	pfam08038, Tom7, TOM7 family	1e-16

>gnl|CDD|219708 pfam08038, Tom7, TOM7 family

 Score = 65.8 bits (161), Expect = 1e-16
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 2/42 (4%)

Query: 30 KEWSTWTMKKAKVVTHYGFIPLIIIIGMN--SDPKPQVYQLL 69
          KE  T  +K +KV  HYGFIPLII +GM   ++PKP +  LL
Sbjct: 1  KERITKVLKVSKVAAHYGFIPLIIYLGMRKGAEPKPSLLSLL 42

This family consists of TOM7 family of mitochondrial import receptors. TOM7 forms part of the translocase of the outer mitochondrial membrane (TOM) complex and it appears to function as a modulator of the dynamics of the mitochondrial protein transport machinery by promoting the dissociation of subunits of the outer membrane translocase. Length = 42

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	72
PF08038	42	Tom7: TOM7 family; InterPro: IPR012621 This family	99.87
KOG4449	53	consensus Translocase of outer mitochondrial membr	99.68

>PF08038 Tom7: TOM7 family; InterPro: IPR012621 This family consists of TOM7 family of mitochondrial import receptors

Probab=99.87  E-value=1.1e-23  Score=122.27  Aligned_cols=40  Identities=55%  Similarity=0.865  Sum_probs=37.6

Q ss_pred             hhhheeeeeceEEEEEeehhhheeeccccC--CCCcceeccc
Q 035138           30 KEWSTWTMKKAKVVTHYGFIPLIIIIGMNS--DPKPQVYQLL   69 (72)
Q Consensus        30 kew~tw~~~~~k~~~HyGfIPlIIylG~~S--~PkPsL~~LL   69 (72)
                      |||.+|+++++|+++|||||||||||||++  ||+|||+|||
T Consensus         1 Keri~~v~~~~k~~~HyGfIP~IlylG~~~~~~p~Psl~~LL   42 (42)
T PF08038_consen    1 KERITKVLDVAKTVFHYGFIPLILYLGFRSGADPMPSLIQLL   42 (42)
T ss_pred             ChHHHHHHHhheeeEEeeehHHHHHHhhccCCCCCCcHHhhC
Confidence            799999999999999999999999999964  7789999997

TOM7 forms part of the translocase of the outer mitochondrial membrane (TOM) complex and it appears to function as a modulator of the dynamics of the mitochondrial protein transport machinery by promoting the dissociation of subunits of the outer membrane translocase [].; GO: 0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity, 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane

>KOG4449 consensus Translocase of outer mitochondrial membrane complex, subunit TOM7 [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.68  E-value=1e-17  Score=102.14  Aligned_cols=46  Identities=35%  Similarity=0.601  Sum_probs=38.3

Q ss_pred             hhhhhhhhhhhhhheeeeeceEEEEEeehhhheeeccc-c-CCCCcceeccccCC
Q 035138           20 SEEKSMVDSFKEWSTWTMKKAKVVTHYGFIPLIIIIGM-N-SDPKPQVYQLLSPV   72 (72)
Q Consensus        20 ~~~~s~~~~~kew~tw~~~~~k~~~HyGfIPlIIylG~-~-S~PkPsL~~LLsPl   72 (72)
                      .++++++|++|-     ++++++++||||||||||||| + ++| |+. ++||+|
T Consensus         3 lS~esKerl~k~-----~~is~~vih~G~IP~VlyLG~a~~a~~-Pn~-~~lS~l   50 (53)
T KOG4449|consen    3 LSEESKERLVKV-----FNISKFVIHYGWIPLVLYLGFAFGARP-PNF-NTLSLL   50 (53)
T ss_pred             cCHHHHHHHHHH-----eechheeeeechhhHHHHhhhhhcCCC-CCC-cchhhc
Confidence            478999999999     999999999999999999999 4 555 544 555553

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00