Citrus Sinensis ID: 035266

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------7
Protein Sequence
MGESSDSVSIDIDMVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFFHFFIFFIFF
Secondary Structure (PSIPRED)
cccccccEEEEEEccccccEEEEEEccccEEEEEEEccccccEEEEEccccccHHHccccEEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEEcEEccccEEEEEEccccEEEEEEEccccccEEEEcccHHHcHHHHHHHHHHHHEEEc
Coil and Loop (DISEMBL)
mgessdsvsididmvpfggkecvvktsrgsvsvfvcgdqekpalitypdvalNCIVFFFFHFFIFFIFF
Flexible Loop (DISEMBL)
mgessdsvsididmvpfGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFFHFFIFFIFF
Low Complexity Region (SEG)
MGEssdsvsididMVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVffffhffiffiff
Disordered region (IsUnstruct)
*********IDIDMVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFFHFFIFFIF*
Disordered Region (DISOPRED)
******S***DIDMVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFFHFFIFFIFF
Disordered Region (DISEMBL)
********SIDIDMVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFFHFFIFFIFF
Disordered Region (DISPRO)
*****DSVSIDIDMVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFFHFFIFFIFF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGESSDSVSIDIDMVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFFHFFIFFIFF
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	69	2.2.26 [Sep-21-2011]
O23969	352	Pollen-specific protein S	N/A	no	0.840	0.164	0.551	7e-11

>sp|O23969|SF21_HELAN Pollen-specific protein SF21 OS=Helianthus annuus GN=SF21 PE=2 SV=1

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/58 (55%), Positives = 40/58 (68%)

Query: 1  MGESSDSVSIDIDMVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFF 58
          M +S  S+S+       GGKE +++T  GSVSV VCGDQEKP LITYPD+ALN +  F
Sbjct: 1  MADSGHSISVTFPSFHSGGKEHIIRTGCGSVSVTVCGDQEKPPLITYPDLALNHMSCF 58

Helianthus annuus (taxid: 4232)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	69
147840871	380	hypothetical protein VITISV_018992 [Viti	0.913	0.165	0.809	8e-22
225451275	353	PREDICTED: pollen-specific protein SF21	0.913	0.178	0.809	1e-21
356535159	354	PREDICTED: pollen-specific protein SF21-	0.840	0.163	0.810	2e-20
359806364	353	uncharacterized protein LOC100803300 [Gl	0.840	0.164	0.793	3e-20
388508046	351	unknown [Lotus japonicus]	0.768	0.150	0.867	7e-20
224125610	355	predicted protein [Populus trichocarpa]	0.840	0.163	0.827	7e-20
357441463	354	Pollen-specific protein SF21 [Medicago t	0.840	0.163	0.741	2e-18
255542344	170	pollen specific protein sf21, putative [	0.913	0.370	0.761	4e-18
168040280	352	predicted protein [Physcomitrella patens	0.971	0.190	0.5	5e-13
225429470	344	PREDICTED: pollen-specific protein SF21	0.913	0.183	0.619	5e-13

>gi|147840871|emb|CAN68782.1| hypothetical protein VITISV_018992 [Vitis vinifera]

 Score =  107 bits (268), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 51/63 (80%), Positives = 56/63 (88%)

Query: 1  MGESSDSVSIDIDMVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFF 60
          MGESSDSVSIDI+M+P GGKECVVKTS+GS+SVFVCGDQEKPALITYPDVALN +  F  
Sbjct: 1  MGESSDSVSIDIEMIPLGGKECVVKTSKGSISVFVCGDQEKPALITYPDVALNYMSCFQG 60

Query: 61 HFF 63
           FF
Sbjct: 61 LFF 63

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225451275|ref|XP_002277583.1| PREDICTED: pollen-specific protein SF21 [Vitis vinifera] gi|298204892|emb|CBI34199.3| unnamed protein product [Vitis vinifera]

 Score =  107 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/63 (80%), Positives = 56/63 (88%)

Query: 1  MGESSDSVSIDIDMVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFF 60
          MGESSDSVSIDI+M+P GGKECVVKTS+GS+SVFVCGDQEKPALITYPDVALN +  F  
Sbjct: 1  MGESSDSVSIDIEMIPLGGKECVVKTSKGSISVFVCGDQEKPALITYPDVALNYMSCFQG 60

Query: 61 HFF 63
           FF
Sbjct: 61 LFF 63

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535159|ref|XP_003536116.1| PREDICTED: pollen-specific protein SF21-like [Glycine max]

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/58 (81%), Positives = 52/58 (89%)

Query: 1  MGESSDSVSIDIDMVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFF 58
          MGESSDSVSIDID++P GGKEC VKTS+GSVSV VCGDQEKPALITYPD+ALN +  F
Sbjct: 1  MGESSDSVSIDIDLIPLGGKECTVKTSKGSVSVLVCGDQEKPALITYPDLALNYVSCF 58

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806364|ref|NP_001241488.1| uncharacterized protein LOC100803300 [Glycine max] gi|255637191|gb|ACU18926.1| unknown [Glycine max]

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 46/58 (79%), Positives = 52/58 (89%)

Query: 1  MGESSDSVSIDIDMVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFF 58
          MGESSDSVSIDID++P GGKEC VKTS+GS+SV VCGD+EKPALITYPDVALN +  F
Sbjct: 1  MGESSDSVSIDIDLIPLGGKECTVKTSKGSMSVLVCGDREKPALITYPDVALNYVSCF 58

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388508046|gb|AFK42089.1| unknown [Lotus japonicus]

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 46/53 (86%), Positives = 50/53 (94%)

Query: 1  MGESSDSVSIDIDMVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALN 53
          MGESSDSVSIDID++P GGKEC VKTS+GSVSV VCGDQ+KPALITYPDVALN
Sbjct: 1  MGESSDSVSIDIDLIPLGGKECTVKTSKGSVSVLVCGDQDKPALITYPDVALN 53

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125610|ref|XP_002319631.1| predicted protein [Populus trichocarpa] gi|118486441|gb|ABK95060.1| unknown [Populus trichocarpa] gi|222858007|gb|EEE95554.1| predicted protein [Populus trichocarpa]

 Score =  100 bits (250), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 48/58 (82%), Positives = 53/58 (91%)

Query: 1  MGESSDSVSIDIDMVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFF 58
          MGESSDSVS+DIDM+ FGGKE VVKTSRGS+SV+VCGDQEKPALITYPDVALN +  F
Sbjct: 1  MGESSDSVSVDIDMLSFGGKEHVVKTSRGSISVYVCGDQEKPALITYPDVALNSMTCF 58

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357441463|ref|XP_003591009.1| Pollen-specific protein SF21 [Medicago truncatula] gi|355480057|gb|AES61260.1| Pollen-specific protein SF21 [Medicago truncatula]

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/58 (74%), Positives = 51/58 (87%)

Query: 1  MGESSDSVSIDIDMVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFF 58
          M  S+DSVSIDID++P GGKEC+VKTS+GSVSV +CGDQ+KPALITYPDVALN +  F
Sbjct: 1  MRNSTDSVSIDIDLIPLGGKECIVKTSKGSVSVLICGDQDKPALITYPDVALNYLSCF 58

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542344|ref|XP_002512235.1| pollen specific protein sf21, putative [Ricinus communis] gi|223548196|gb|EEF49687.1| pollen specific protein sf21, putative [Ricinus communis]

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 48/63 (76%), Positives = 54/63 (85%)

Query: 1  MGESSDSVSIDIDMVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFF 60
          MGESSDSVSIDI+M+PF GKE VVKTS GS++V+VCGDQEKPALITYPDVALN +  F  
Sbjct: 1  MGESSDSVSIDINMLPFEGKEYVVKTSGGSITVYVCGDQEKPALITYPDVALNYMSCFQG 60

Query: 61 HFF 63
           FF
Sbjct: 61 LFF 63

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|168040280|ref|XP_001772623.1| predicted protein [Physcomitrella patens subsp. patens] gi|162676178|gb|EDQ62665.1| predicted protein [Physcomitrella patens subsp. patens]

 Score = 78.6 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 13/80 (16%)

Query: 1  MGESSDSVSIDIDMVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFF-- 58
          M E  DS+++D+D+VP GG+E +V TS G +SV VCGDQ+KPAL+TYPDV LN +  F  
Sbjct: 2  MEEGGDSIALDMDIVPSGGQEYMVPTSFGHISVTVCGDQDKPALVTYPDVGLNYLSCFEG 61

Query: 59 -----------FFHFFIFFI 67
                     FF+F IF I
Sbjct: 62 LFSCPEASSVLFFNFCIFHI 81

Source: Physcomitrella patens subsp. patens

Species: Physcomitrella patens

Genus: Physcomitrella

Family: Funariaceae

Order: Funariales

Class: Bryopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429470|ref|XP_002277611.1| PREDICTED: pollen-specific protein SF21 [Vitis vinifera] gi|296081622|emb|CBI20627.3| unnamed protein product [Vitis vinifera]

 Score = 78.6 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/63 (61%), Positives = 49/63 (77%)

Query: 1  MGESSDSVSIDIDMVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFF 60
          M +SSDSVSID++ +  GGKE +VKTS+GSVSV V GD +KPAL+TYPD+ALN +  F  
Sbjct: 1  MADSSDSVSIDMETISLGGKEHLVKTSKGSVSVSVFGDPDKPALVTYPDLALNHLSCFQG 60

Query: 61 HFF 63
           FF
Sbjct: 61 LFF 63

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	69
TAIR|locus:2050404	347	NDL3 "AT2G19620" [Arabidopsis	0.521	0.103	0.833	3.9e-09
TAIR|locus:2165101	346	NDL1 "AT5G56750" [Arabidopsis	0.521	0.104	0.75	6.3e-08
TAIR|locus:2181905	344	NDL2 "AT5G11790" [Arabidopsis	0.521	0.104	0.666	1.3e-07

TAIR|locus:2050404 NDL3 "AT2G19620" [Arabidopsis thaliana (taxid:3702)]

 Score = 141 (54.7 bits), Expect = 3.9e-09, P = 3.9e-09
 Identities = 30/36 (83%), Positives = 30/36 (83%)

Query:    18 GGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALN 53
             GGKE  VKT  GSVSV V GDQEKPALITYPDVALN
Sbjct:    18 GGKEHHVKTCHGSVSVVVYGDQEKPALITYPDVALN 53

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0030154 "cell differentiation" evidence=ISS

TAIR|locus:2165101 NDL1 "AT5G56750" [Arabidopsis thaliana (taxid:3702)]

 Score = 130 (50.8 bits), Expect = 6.3e-08, P = 6.3e-08
 Identities = 27/36 (75%), Positives = 30/36 (83%)

Query:    18 GGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALN 53
             GGKE  VKT+ G VSV V GD+EKPALITYPD+ALN
Sbjct:    18 GGKEHRVKTASGVVSVIVYGDREKPALITYPDLALN 53

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0030154 "cell differentiation" evidence=ISS

GO:0060918 "auxin transport" evidence=IMP

TAIR|locus:2181905 NDL2 "AT5G11790" [Arabidopsis thaliana (taxid:3702)]

 Score = 127 (49.8 bits), Expect = 1.3e-07, P = 1.3e-07
 Identities = 24/36 (66%), Positives = 30/36 (83%)

Query:    18 GGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALN 53
             GG+E +V+T+ G V V VCGD +KPALITYPD+ALN
Sbjct:    18 GGQEHLVETTYGPVCVAVCGDPDKPALITYPDIALN 53


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.140   0.432    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       69        46   0.00091  102 3  11 22  0.48    26
                                                     29  0.43    25


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  454 (48 KB)
  Total size of DFA:  76 KB (2062 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  6.62u 0.14s 6.76t   Elapsed:  00:00:00
  Total cpu time:  6.62u 0.14s 6.76t   Elapsed:  00:00:00
  Start:  Fri May 10 06:56:16 2013   End:  Fri May 10 06:56:16 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0030154 "cell differentiation" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	69
pfam03096	284	pfam03096, Ndr, Ndr family	3e-08

>gnl|CDD|190521 pfam03096, Ndr, Ndr family

 Score = 47.7 bits (114), Expect = 3e-08
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 5/46 (10%)

Query: 21 ECVVKTSRGSVSVFVCGDQE--KPALITYPDVALN---CIVFFFFH 61
          E +++T  GSV V V GD +  KP ++TY D+ LN   C    F  
Sbjct: 1  EHIIETPCGSVHVTVYGDPKGKKPPILTYHDLGLNHKSCFQGLFNS 46

This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted. The precise molecular and cellular function of members of this family is still unknown. Yet, they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases pfam00561, suggesting that this family may have an enzymatic function (Bateman A pers. obs.). Length = 284

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	69
KOG2931	326	consensus Differentiation-related gene 1 protein (	99.92
PF03096	283	Ndr: Ndr family; InterPro: IPR004142 This family c	99.88

>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]

Probab=99.92  E-value=3e-26  Score=174.99  Aligned_cols=64  Identities=45%  Similarity=0.566  Sum_probs=61.7

Q ss_pred             CCCCCCceEEeecCCCCCC---eeEEEeCCCceEEEEEecCCC--CCeEEEcccccccceecchhhhhh
Q 035266            1 MGESSDSVSIDIDMVPFGG---KECVVKTSRGSVSVFVCGDQE--KPALITYPDVALNCIVFFFFHFFI   64 (69)
Q Consensus         1 m~~s~~svsid~~~~~~~~---~Eh~V~T~~G~v~V~v~Gd~~--kPailTYHDlGLNh~ScF~~fF~~   64 (69)
                      |+++.+.++.|++.+..++   |||+|+|++|.|||+||||++  ||||||||||||||+||||+||+|
T Consensus         1 M~~~~~~~~~d~~pl~~~~~~~~e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~   69 (326)
T KOG2931|consen    1 MAELQDVVSTDIKPLLEGGATCQEHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNF   69 (326)
T ss_pred             CCcccccccccchhhhcCCCcceeeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcC
Confidence            8899999999999999999   999999999999999999877  999999999999999999999997

>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3

Probab=99.88  E-value=1.8e-23  Score=156.24  Aligned_cols=44  Identities=48%  Similarity=0.567  Sum_probs=35.4

Q ss_pred             eEEEeCCCceEEEEEecCCC--CCeEEEcccccccceecchhhhhh
Q 035266           21 ECVVKTSRGSVSVFVCGDQE--KPALITYPDVALNCIVFFFFHFFI   64 (69)
Q Consensus        21 Eh~V~T~~G~v~V~v~Gd~~--kPailTYHDlGLNh~ScF~~fF~~   64 (69)
                      ||+|+|++|+|+|+|||+++  |||||||||+||||+|||++||+|
T Consensus         1 eh~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~   46 (283)
T PF03096_consen    1 EHDVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNF   46 (283)
T ss_dssp             -EEEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCS
T ss_pred             CceeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcc
Confidence            89999999999999999877  999999999999999999999997

Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	69
2qmq_A	286	Protein NDRG2, protein NDR2; alpha/beta-hydrolases	7e-06

>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A Length = 286

 Score = 40.5 bits (94), Expect = 7e-06
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 17 FGGKECVVKTSRGSVSVFVCG--DQEKPALITYPDVALNCIVFFFFHFF 63
                 V+T  GSV+  V G    ++PA+ TY DV LN    F   F 
Sbjct: 9  HHHHTHSVETPYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFR 57

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	69
2r11_A	306	Carboxylesterase NP; 2632844, putative hydrolase,	95.64
3qit_A	286	CURM TE, polyketide synthase; thioesterase, alpha/	94.17
3g9x_A	299	Haloalkane dehalogenase; alpha/beta hydrolase, hel	92.95
2qmq_A	286	Protein NDRG2, protein NDR2; alpha/beta-hydrolases	91.57
3r40_A	306	Fluoroacetate dehalogenase; FACD, defluorinase, al	89.45
3oos_A	278	Alpha/beta hydrolase family protein; APC67239.0, p	89.25
4g9e_A	279	AHL-lactonase, alpha/beta hydrolase fold protein;	89.18
3kxp_A	314	Alpha-(N-acetylaminomethylene)succinic acid hydrol	87.35
3l80_A	292	Putative uncharacterized protein SMU.1393C; alpha/	85.77
3kda_A	301	CFTR inhibitory factor (CIF); alpha/beta hydrolase	84.14
3om8_A	266	Probable hydrolase; structural genomics, PSI-2, pr	84.08
3u1t_A	309	DMMA haloalkane dehalogenase; alpha/beta-hydrolase	80.92
3bwx_A	285	Alpha/beta hydrolase; YP_496220.1, joint center fo	80.68

>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}

Probab=95.64  E-value=0.032  Score=36.27  Aligned_cols=50  Identities=16%  Similarity=0.373  Sum_probs=41.1

Q ss_pred             ecCCCCCCeeEEEeCCCceEEEEEecCCCCCeEEEcccccccceecchhhh
Q 035266           12 IDMVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFFHF   62 (69)
Q Consensus        12 ~~~~~~~~~Eh~V~T~~G~v~V~v~Gd~~kPailTYHDlGLNh~ScF~~fF   62 (69)
                      ++.++...+++.|+++.|.+++...|++++|+||-.|-.|-+... |..+.
T Consensus        38 ~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~~~vv~lHG~~~~~~~-~~~~~   87 (306)
T 2r11_A           38 LSLWPVRCKSFYISTRFGQTHVIASGPEDAPPLVLLHGALFSSTM-WYPNI   87 (306)
T ss_dssp             HTTCCSCCEEEEECCTTEEEEEEEESCTTSCEEEEECCTTTCGGG-GTTTH
T ss_pred             HHhCCCCcceEEEecCCceEEEEeeCCCCCCeEEEECCCCCCHHH-HHHHH
Confidence            345666678899999999999999998889999999999987754 65543

>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}

Probab=94.17  E-value=0.14  Score=31.12  Aligned_cols=43  Identities=9%  Similarity=0.132  Sum_probs=36.6

Q ss_pred             CCeeEEEeCCCceEEEEEecCCCCCeEEEcccccccceecchhh
Q 035266           18 GGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFFH   61 (69)
Q Consensus        18 ~~~Eh~V~T~~G~v~V~v~Gd~~kPailTYHDlGLNh~ScF~~f   61 (69)
                      +-+++.+++..+.+++...|++++|+||-.|-.|-+.. +|..+
T Consensus         3 ~~~~~~~~~~g~~l~~~~~g~~~~~~vv~~hG~~~~~~-~~~~~   45 (286)
T 3qit_A            3 AMEEKFLEFGGNQICLCSWGSPEHPVVLCIHGILEQGL-AWQEV   45 (286)
T ss_dssp             CCEEEEEEETTEEEEEEEESCTTSCEEEEECCTTCCGG-GGHHH
T ss_pred             hhhhheeecCCceEEEeecCCCCCCEEEEECCCCcccc-hHHHH
Confidence            34688888899999999999999999999999998875 46655

>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A

Probab=92.95  E-value=0.26  Score=30.61  Aligned_cols=45  Identities=7%  Similarity=0.016  Sum_probs=37.0

Q ss_pred             CCCeeEEEeCCCceEEEEEecCCCCCeEEEcccccccceecchhhh
Q 035266           17 FGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFFHF   62 (69)
Q Consensus        17 ~~~~Eh~V~T~~G~v~V~v~Gd~~kPailTYHDlGLNh~ScF~~fF   62 (69)
                      ...+++.+++..+.+++...|++++|+||-.|-+|.+.. +|..+.
T Consensus         8 ~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~lHG~~~~~~-~~~~~~   52 (299)
T 3g9x_A            8 FPFDPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSY-LWRNII   52 (299)
T ss_dssp             CCCCCEEEEETTEEEEEEEESCSSSCCEEEECCTTCCGG-GGTTTH
T ss_pred             cccceeeeeeCCeEEEEEecCCCCCCEEEEECCCCccHH-HHHHHH
Confidence            445677888888899999999989999999999998775 576554

>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A

Probab=91.57  E-value=0.23  Score=31.52  Aligned_cols=41  Identities=39%  Similarity=0.503  Sum_probs=33.5

Q ss_pred             eEEEeCCCceEEEEEecCC--CCCeEEEcccccccceecchhh
Q 035266           21 ECVVKTSRGSVSVFVCGDQ--EKPALITYPDVALNCIVFFFFH   61 (69)
Q Consensus        21 Eh~V~T~~G~v~V~v~Gd~--~kPailTYHDlGLNh~ScF~~f   61 (69)
                      -+++++....+++...|++  ++|+||-.|-+|-+..++|...
T Consensus        13 ~~~~~~~~~~l~y~~~G~~~~~~p~vvllHG~~~~~~~~~~~~   55 (286)
T 2qmq_A           13 THSVETPYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPL   55 (286)
T ss_dssp             EEEEEETTEEEEEEEESCCCTTCCEEEEECCTTCCHHHHHHHH
T ss_pred             ccccccCCeEEEEEeccCCCCCCCeEEEeCCCCCCchhhhhhh
Confidence            3566677779999999976  7899999999999987777653

>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A

Probab=89.45  E-value=1.3  Score=27.41  Aligned_cols=46  Identities=17%  Similarity=0.138  Sum_probs=36.5

Q ss_pred             CCCCCCeeEEEeCCCceEEEEEecCCCCCeEEEcccccccceecchhhh
Q 035266           14 MVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFFHF   62 (69)
Q Consensus        14 ~~~~~~~Eh~V~T~~G~v~V~v~Gd~~kPailTYHDlGLNh~ScF~~fF   62 (69)
                      .....-+++.+.+..+.+++...|  ++|+||-.|-.|-+.. +|..+.
T Consensus         8 ~~~~~~~~~~~~~~g~~l~~~~~g--~~~~vv~lHG~~~~~~-~~~~~~   53 (306)
T 3r40_A            8 DLFPGFGSEWINTSSGRIFARVGG--DGPPLLLLHGFPQTHV-MWHRVA   53 (306)
T ss_dssp             CCSTTCEEEEECCTTCCEEEEEEE--CSSEEEEECCTTCCGG-GGGGTH
T ss_pred             hhccCCceEEEEeCCEEEEEEEcC--CCCeEEEECCCCCCHH-HHHHHH
Confidence            344566788888888899999998  6799999999998875 476654

>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}

Probab=89.25  E-value=0.59  Score=28.44  Aligned_cols=39  Identities=23%  Similarity=0.151  Sum_probs=32.1

Q ss_pred             eeEEEeCCCceEEEEEecCCCCCeEEEcccccccceecchhh
Q 035266           20 KECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFFH   61 (69)
Q Consensus        20 ~Eh~V~T~~G~v~V~v~Gd~~kPailTYHDlGLNh~ScF~~f   61 (69)
                      +++.|++..|.+++...|  ++|+||-.|-+|-+... |..+
T Consensus         4 ~~~~~~~~~~~~~y~~~g--~~~~vv~~HG~~~~~~~-~~~~   42 (278)
T 3oos_A            4 TTNIIKTPRGKFEYFLKG--EGPPLCVTHLYSEYNDN-GNTF   42 (278)
T ss_dssp             EEEEEEETTEEEEEEEEC--SSSEEEECCSSEECCTT-CCTT
T ss_pred             ccCcEecCCceEEEEecC--CCCeEEEEcCCCcchHH-HHHH
Confidence            577889999999999988  57899999999987754 6544

>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A

Probab=89.18  E-value=0.57  Score=28.66  Aligned_cols=42  Identities=17%  Similarity=0.135  Sum_probs=33.5

Q ss_pred             CeeEEEeCCCceEEEEEecCCCCCeEEEcccccccceecchhhh
Q 035266           19 GKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFFHF   62 (69)
Q Consensus        19 ~~Eh~V~T~~G~v~V~v~Gd~~kPailTYHDlGLNh~ScF~~fF   62 (69)
                      .+++.|+|+.|.+++...|. ++|+||-.|-+|-+... |..+.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~-~~~~vv~lHG~~~~~~~-~~~~~   44 (279)
T 4g9e_A            3 INYHELETSHGRIAVRESEG-EGAPLLMIHGNSSSGAI-FAPQL   44 (279)
T ss_dssp             CEEEEEEETTEEEEEEECCC-CEEEEEEECCTTCCGGG-GHHHH
T ss_pred             eEEEEEEcCCceEEEEecCC-CCCeEEEECCCCCchhH-HHHHH
Confidence            46789999999998888774 67899999999987654 66544

>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}

Probab=87.35  E-value=1.5  Score=28.01  Aligned_cols=41  Identities=17%  Similarity=0.132  Sum_probs=33.1

Q ss_pred             CeeEEEeCCCceEEEEEecCCCCCeEEEcccccccceecchhhh
Q 035266           19 GKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFFHF   62 (69)
Q Consensus        19 ~~Eh~V~T~~G~v~V~v~Gd~~kPailTYHDlGLNh~ScF~~fF   62 (69)
                      -+++.+++..+.+++...|+  +|+||-.|..|-+.. +|..+.
T Consensus        48 ~~~~~~~~~~~~~~~~~~g~--~p~vv~lhG~~~~~~-~~~~~~   88 (314)
T 3kxp_A           48 FISRRVDIGRITLNVREKGS--GPLMLFFHGITSNSA-VFEPLM   88 (314)
T ss_dssp             CEEEEEECSSCEEEEEEECC--SSEEEEECCTTCCGG-GGHHHH
T ss_pred             cceeeEEECCEEEEEEecCC--CCEEEEECCCCCCHH-HHHHHH
Confidence            37788888888999988887  899999999998775 466543

>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}

Probab=85.77  E-value=1.1  Score=28.16  Aligned_cols=44  Identities=11%  Similarity=0.070  Sum_probs=31.2

Q ss_pred             CCCeeEEEeCCCceEEEEEecCCCCCeEEEcccccccc-eecchhhh
Q 035266           17 FGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNC-IVFFFFHF   62 (69)
Q Consensus        17 ~~~~Eh~V~T~~G~v~V~v~Gd~~kPailTYHDlGLNh-~ScF~~fF   62 (69)
                      ...+++.|+|+.|.+++.  +...+|+||-.|-+|+.. ..+|..+.
T Consensus        19 ~~~~~~~v~~~~~~~~~~--~~~~~p~vv~lHG~G~~~~~~~~~~~~   63 (292)
T 3l80_A           19 AALNKEMVNTLLGPIYTC--HREGNPCFVFLSGAGFFSTADNFANII   63 (292)
T ss_dssp             -CCEEEEECCTTSCEEEE--EECCSSEEEEECCSSSCCHHHHTHHHH
T ss_pred             hccCcceEEecCceEEEe--cCCCCCEEEEEcCCCCCcHHHHHHHHH
Confidence            345788999999998766  444679999999887642 23465544

>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A

Probab=84.14  E-value=2.9  Score=26.02  Aligned_cols=44  Identities=9%  Similarity=0.064  Sum_probs=33.8

Q ss_pred             CCCCeeEEEeCCCceEEEEEecCCCCCeEEEcccccccceecchhhh
Q 035266           16 PFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFFHF   62 (69)
Q Consensus        16 ~~~~~Eh~V~T~~G~v~V~v~Gd~~kPailTYHDlGLNh~ScF~~fF   62 (69)
                      +.+.+++.+.+..+.+++...|  ++|+||-.|-+|-+.. +|..+.
T Consensus         7 ~~~~~~~~~~~~g~~l~~~~~g--~~~~vv~lHG~~~~~~-~~~~~~   50 (301)
T 3kda_A            7 PNGFESAYREVDGVKLHYVKGG--QGPLVMLVHGFGQTWY-EWHQLM   50 (301)
T ss_dssp             CTTCEEEEEEETTEEEEEEEEE--SSSEEEEECCTTCCGG-GGTTTH
T ss_pred             ccccceEEEeeCCeEEEEEEcC--CCCEEEEECCCCcchh-HHHHHH
Confidence            3445666677777799999999  6799999999998875 476554

>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0

Probab=84.08  E-value=3.1  Score=26.74  Aligned_cols=43  Identities=23%  Similarity=0.282  Sum_probs=32.9

Q ss_pred             CeeEEEeCCCc-eEEEEEecCCCCCeEEEcccccccceecchhhh
Q 035266           19 GKECVVKTSRG-SVSVFVCGDQEKPALITYPDVALNCIVFFFFHF   62 (69)
Q Consensus        19 ~~Eh~V~T~~G-~v~V~v~Gd~~kPailTYHDlGLNh~ScF~~fF   62 (69)
                      +....+.|..| .+++...|..++|+||-.|-+|.++.. |..+.
T Consensus         4 ~~~~~~~~~~g~~l~y~~~G~~~~p~lvl~hG~~~~~~~-w~~~~   47 (266)
T 3om8_A            4 GNLSFLATSDGASLAYRLDGAAEKPLLALSNSIGTTLHM-WDAQL   47 (266)
T ss_dssp             TTCEEEECTTSCEEEEEEESCTTSCEEEEECCTTCCGGG-GGGGH
T ss_pred             CCceEEeccCCcEEEEEecCCCCCCEEEEeCCCccCHHH-HHHHH
Confidence            34556666555 888999998889999999999998764 76543

>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}

Probab=80.92  E-value=4.2  Score=25.12  Aligned_cols=44  Identities=7%  Similarity=0.009  Sum_probs=34.7

Q ss_pred             CCCeeEEEeCCCceEEEEEecCCCCCeEEEcccccccceecchhhhh
Q 035266           17 FGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFFHFF   63 (69)
Q Consensus        17 ~~~~Eh~V~T~~G~v~V~v~Gd~~kPailTYHDlGLNh~ScF~~fF~   63 (69)
                      ...+++.++++.+.+++...|+  +|+||-.|-+|-+.. +|..+..
T Consensus         7 ~~~~~~~~~~~g~~l~~~~~g~--~~~vv~~HG~~~~~~-~~~~~~~   50 (309)
T 3u1t_A            7 FPFAKRTVEVEGATIAYVDEGS--GQPVLFLHGNPTSSY-LWRNIIP   50 (309)
T ss_dssp             CCCCCEEEEETTEEEEEEEEEC--SSEEEEECCTTCCGG-GGTTTHH
T ss_pred             ccccceEEEECCeEEEEEEcCC--CCEEEEECCCcchhh-hHHHHHH
Confidence            3456788888888999999986  789999999998775 4766543

>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}

Probab=80.68  E-value=4.2  Score=25.73  Aligned_cols=42  Identities=14%  Similarity=0.144  Sum_probs=32.4

Q ss_pred             eeEEEeCCCc-eEEEEEecCCC-CCeEEEcccccccceecchhhh
Q 035266           20 KECVVKTSRG-SVSVFVCGDQE-KPALITYPDVALNCIVFFFFHF   62 (69)
Q Consensus        20 ~Eh~V~T~~G-~v~V~v~Gd~~-kPailTYHDlGLNh~ScF~~fF   62 (69)
                      +++.+.+..| .+++...|.++ +|+||-.|-+|-|.. +|..+.
T Consensus         6 ~~~~~~~~~g~~l~~~~~g~~~~~~~vvllHG~~~~~~-~~~~~~   49 (285)
T 3bwx_A            6 EDRYWTSSDGLRLHFRAYEGDISRPPVLCLPGLTRNAR-DFEDLA   49 (285)
T ss_dssp             EEEEEECTTSCEEEEEEECBCTTSCCEEEECCTTCCGG-GGHHHH
T ss_pred             ccCeeecCCCceEEEEEcCCCCCCCcEEEECCCCcchh-hHHHHH
Confidence            4667777777 78888999765 899999999998875 476543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	69
d1c4xa_	281	2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas	95.69
d1a88a_	275	Chloroperoxidase L {Streptomyces lividans [TaxId:	94.46
d1wm1a_	313	Proline aminopeptidase {Serratia marcescens [TaxId	93.79
d1bn7a_	291	Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1	93.57
d1q0ra_	297	Aclacinomycin methylesterase RdmC {Streptomyces pu	93.14
d1azwa_	313	Proline iminopeptidase {Xanthomonas campestris, pv	89.41
d1a8qa_	274	Bromoperoxidase A1 {Streptomyces aureofaciens [Tax	89.03
d1k8qa_	377	Gastric lipase {Dog (Canis familiaris) [TaxId: 961	88.69
d1mtza_	290	Tricorn interacting factor F1 {Archaeon Thermoplas	84.76
d1mj5a_	298	Haloalkane dehalogenase {Sphingomonas paucimobilis	83.14
d1jjia_	311	Carboxylesterase {Archaeon Archaeoglobus fulgidus	82.96
d1ehya_	293	Bacterial epoxide hydrolase {Agrobacterium radioba	82.94

>d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carbon-carbon bond hydrolase
domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD)
species: Rhodococcus sp., strain rha1 [TaxId: 1831]

Probab=95.69  E-value=0.0091  Score=36.19  Aligned_cols=38  Identities=16%  Similarity=0.156  Sum_probs=33.0

Q ss_pred             CeeEEEeCCCceEEEEEecCCCCCeEEEccccccccee
Q 035266           19 GKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIV   56 (69)
Q Consensus        19 ~~Eh~V~T~~G~v~V~v~Gd~~kPailTYHDlGLNh~S   56 (69)
                      .-|+++++....+|+.+.|++++|+||-.|-+|.+..+
T Consensus         4 ~~~~~~~~~~~~~h~~~~G~~~~p~ivllHG~~~~~~~   41 (281)
T d1c4xa_           4 IIEKRFPSGTLASHALVAGDPQSPAVVLLHGAGPGAHA   41 (281)
T ss_dssp             CEEEEECCTTSCEEEEEESCTTSCEEEEECCCSTTCCH
T ss_pred             EEEEEEccCCEEEEEEEEecCCCCEEEEECCCCCCCcH
Confidence            45889988888999999999999999999988776544

>d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloperoxidase
domain: Chloroperoxidase L
species: Streptomyces lividans [TaxId: 1916]

Probab=94.46  E-value=0.04  Score=32.46  Aligned_cols=39  Identities=15%  Similarity=0.066  Sum_probs=32.5

Q ss_pred             EEeCCCc-eEEEEEecCCCCCeEEEcccccccceecchhhh
Q 035266           23 VVKTSRG-SVSVFVCGDQEKPALITYPDVALNCIVFFFFHF   62 (69)
Q Consensus        23 ~V~T~~G-~v~V~v~Gd~~kPailTYHDlGLNh~ScF~~fF   62 (69)
                      .|.|+.| .|++..+|+++.|+||-.|-+|-+.. +|..+.
T Consensus         2 ~i~~~dG~~l~y~~~G~~~~~~vv~lHG~~~~~~-~~~~~~   41 (275)
T d1a88a_           2 TVTTSDGTNIFYKDWGPRDGLPVVFHHGWPLSAD-DWDNQM   41 (275)
T ss_dssp             EEECTTSCEEEEEEESCTTSCEEEEECCTTCCGG-GGHHHH
T ss_pred             EEEecCCCEEEEEEecCCCCCeEEEECCCCCCHH-HHHHHH
Confidence            4789999 78999999988899999999998875 476543

>d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Proline iminopeptidase-like
domain: Proline aminopeptidase
species: Serratia marcescens [TaxId: 615]

Probab=93.79  E-value=0.094  Score=30.67  Aligned_cols=41  Identities=10%  Similarity=0.008  Sum_probs=34.3

Q ss_pred             eeEEEeCCCc-eEEEEEecCCCCCeEEEcccccccceecchhh
Q 035266           20 KECVVKTSRG-SVSVFVCGDQEKPALITYPDVALNCIVFFFFH   61 (69)
Q Consensus        20 ~Eh~V~T~~G-~v~V~v~Gd~~kPailTYHDlGLNh~ScF~~f   61 (69)
                      +++.|+|+.| .|++...|+++.|+||-.|-++-+... |..+
T Consensus        12 ~~~~v~~~dG~~i~y~~~G~~~g~pvvllHG~~~~~~~-w~~~   53 (313)
T d1wm1a_          12 DSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGIS-PHHR   53 (313)
T ss_dssp             EEEEEECSSSCEEEEEEEECTTSEEEEEECCTTTCCCC-GGGG
T ss_pred             cCCEEEeCCCcEEEEEEecCCCCCeEEEECCCCCcccc-hHHH
Confidence            5778999999 999999999888889999999887754 6544

>d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloalkane dehalogenase
domain: Haloalkane dehalogenase
species: Rhodococcus sp. [TaxId: 1831]

Probab=93.57  E-value=0.072  Score=31.68  Aligned_cols=42  Identities=5%  Similarity=0.015  Sum_probs=34.3

Q ss_pred             eeEEEeCCCceEEEEEecCCCCCeEEEcccccccceecchhhh
Q 035266           20 KECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFFHF   62 (69)
Q Consensus        20 ~Eh~V~T~~G~v~V~v~Gd~~kPailTYHDlGLNh~ScF~~fF   62 (69)
                      +++-|++...++++...|++++|+||-.|-++-+.. +|..+.
T Consensus         8 ~~~~i~~~g~~i~y~~~G~~~~p~lvllHG~~~~~~-~~~~~~   49 (291)
T d1bn7a_           8 DPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSY-LWRNII   49 (291)
T ss_dssp             CCEEEEETTEEEEEEEESCSSSSCEEEECCTTCCGG-GGTTTH
T ss_pred             CCeEEEECCEEEEEEEeCCCCCCeEEEECCCCCCHH-HHHHHH
Confidence            346777877799999999999999999999888764 476654

>d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Aclacinomycin methylesterase RdmC
domain: Aclacinomycin methylesterase RdmC
species: Streptomyces purpurascens [TaxId: 1924]

Probab=93.14  E-value=0.088  Score=31.63  Aligned_cols=37  Identities=22%  Similarity=0.184  Sum_probs=32.2

Q ss_pred             eeEEEeCCCceEEEEEecCCCCCeEEEccccccccee
Q 035266           20 KECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIV   56 (69)
Q Consensus        20 ~Eh~V~T~~G~v~V~v~Gd~~kPailTYHDlGLNh~S   56 (69)
                      .|+.|+|..-.|+....|++++|+||-.|-+|.|...
T Consensus         1 ~e~~~~~g~~~i~y~~~G~~~~p~vvl~HG~~~~~~~   37 (297)
T d1q0ra_           1 SERIVPSGDVELWSDDFGDPADPALLLVMGGNLSALG   37 (297)
T ss_dssp             CEEEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGG
T ss_pred             CCeEEEECCEEEEEEEecCCCCCEEEEECCCCcChhH
Confidence            3788888888999999999999999999999988654

>d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Proline iminopeptidase-like
domain: Proline iminopeptidase
species: Xanthomonas campestris, pv. citri [TaxId: 339]

Probab=89.41  E-value=0.38  Score=29.74  Aligned_cols=35  Identities=9%  Similarity=0.116  Sum_probs=29.6

Q ss_pred             CeeEEEeCCCc-eEEEEEecCCCCCeEEEccccccc
Q 035266           19 GKECVVKTSRG-SVSVFVCGDQEKPALITYPDVALN   53 (69)
Q Consensus        19 ~~Eh~V~T~~G-~v~V~v~Gd~~kPailTYHDlGLN   53 (69)
                      -+++.|+++.| .+++..+|+++.|+||-.|-.+-+
T Consensus        11 ~~~~~i~~~dg~~i~y~~~G~~~g~pvvllHG~~g~   46 (313)
T d1azwa_          11 YQQGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGG   46 (313)
T ss_dssp             SEEEEEECSSSCEEEEEEEECTTSEEEEEECSTTTT
T ss_pred             CCCCEEEeCCCcEEEEEEecCCCCCEEEEECCCCCC
Confidence            48899999999 789999999888888989976543

>d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloperoxidase
domain: Bromoperoxidase A1
species: Streptomyces aureofaciens [TaxId: 1894]

Probab=89.03  E-value=0.35  Score=28.25  Aligned_cols=36  Identities=14%  Similarity=0.048  Sum_probs=28.5

Q ss_pred             EeCCCc-eEEEEEecCCCCCeEEEcccccccceecchhhh
Q 035266           24 VKTSRG-SVSVFVCGDQEKPALITYPDVALNCIVFFFFHF   62 (69)
Q Consensus        24 V~T~~G-~v~V~v~Gd~~kPailTYHDlGLNh~ScF~~fF   62 (69)
                      |+|+.| ++++...|+.  |+||-.|-.|.++. +|..+.
T Consensus         3 ~~t~dG~~l~y~~~G~g--~~ivlvHG~~~~~~-~~~~~~   39 (274)
T d1a8qa_           3 CTTRDGVEIFYKDWGQG--RPVVFIHGWPLNGD-AWQDQL   39 (274)
T ss_dssp             EECTTSCEEEEEEECSS--SEEEEECCTTCCGG-GGHHHH
T ss_pred             EECcCCCEEEEEEECCC--CeEEEECCCCCCHH-HHHHHH
Confidence            789999 8999999953  56777999998875 576654

>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Gastric lipase
domain: Gastric lipase
species: Dog (Canis familiaris) [TaxId: 9615]

Probab=88.69  E-value=0.61  Score=28.51  Aligned_cols=43  Identities=12%  Similarity=0.136  Sum_probs=30.9

Q ss_pred             CCCCCeeEEEeCCCce-EEEE-E-e------cCCCCCeEEEcccccccceecc
Q 035266           15 VPFGGKECVVKTSRGS-VSVF-V-C------GDQEKPALITYPDVALNCIVFF   58 (69)
Q Consensus        15 ~~~~~~Eh~V~T~~G~-v~V~-v-~------Gd~~kPailTYHDlGLNh~ScF   58 (69)
                      .....++|.|.|+.|. |.+. + +      +.++||+||-.|=++-|.. +|
T Consensus        23 ~~y~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~-~~   74 (377)
T d1k8qa_          23 WGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASAT-NW   74 (377)
T ss_dssp             TTCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGG-GG
T ss_pred             cCCCceEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchh-HH
Confidence            3456789999999994 3333 1 2      2467999999998888865 35

>d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Proline iminopeptidase-like
domain: Tricorn interacting factor F1
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=84.76  E-value=1.4  Score=25.37  Aligned_cols=40  Identities=18%  Similarity=0.092  Sum_probs=30.2

Q ss_pred             CeeEEEeCCCceEEEEEecC-CCCCeEEEcccccccceecc
Q 035266           19 GKECVVKTSRGSVSVFVCGD-QEKPALITYPDVALNCIVFF   58 (69)
Q Consensus        19 ~~Eh~V~T~~G~v~V~v~Gd-~~kPailTYHDlGLNh~ScF   58 (69)
                      ..|.-++.....++....|. .+||+||-.|-.+-+..+.+
T Consensus         2 ~~~~~~~~~g~~i~y~~~g~~~~~~~iv~lHG~~g~~~~~~   42 (290)
T d1mtza_           2 CIENYAKVNGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYL   42 (290)
T ss_dssp             CEEEEEEETTEEEEEEEECCSSCSEEEEEECCTTTCCSGGG
T ss_pred             CccCeEEECCEEEEEEEcCCCCCCCeEEEECCCCCchHHHH
Confidence            45777888777899999994 56899999998865555433

>d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloalkane dehalogenase
domain: Haloalkane dehalogenase
species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]

Probab=83.14  E-value=1.6  Score=24.93  Aligned_cols=47  Identities=9%  Similarity=0.139  Sum_probs=34.2

Q ss_pred             ecCCCCCCeeEEEeCCCceEEEEEecCCCCCeEEEcccccccceecchhhh
Q 035266           12 IDMVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFFHF   62 (69)
Q Consensus        12 ~~~~~~~~~Eh~V~T~~G~v~V~v~Gd~~kPailTYHDlGLNh~ScF~~fF   62 (69)
                      |+.-|++. .+-|+....++++...|+  +|+||-.|-+|-+.. +|..+.
T Consensus         2 ~~~~p~~~-~~fi~~~g~~i~y~~~G~--g~~vvllHG~~~~~~-~~~~~~   48 (298)
T d1mj5a_           2 LGAKPFGE-KKFIEIKGRRMAYIDEGT--GDPILFQHGNPTSSY-LWRNIM   48 (298)
T ss_dssp             CCSSCSSC-CEEEEETTEEEEEEEESC--SSEEEEECCTTCCGG-GGTTTG
T ss_pred             CCCcCCCC-CEEEEECCEEEEEEEEcC--CCcEEEECCCCCCHH-HHHHHH
Confidence            34556644 356777777899999995  588999999998875 477654

>d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase
domain: Carboxylesterase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=82.96  E-value=0.54  Score=30.29  Aligned_cols=32  Identities=22%  Similarity=0.408  Sum_probs=26.4

Q ss_pred             eeEEEeCCCceEEEEEec-CCCCCeEEEccccc
Q 035266           20 KECVVKTSRGSVSVFVCG-DQEKPALITYPDVA   51 (69)
Q Consensus        20 ~Eh~V~T~~G~v~V~v~G-d~~kPailTYHDlG   51 (69)
                      ++..|+++.|.|.+.++- +.++|+||-+|==|
T Consensus        57 ~~~~i~~~~g~i~~~iy~P~~~~P~il~iHGGg   89 (311)
T d1jjia_          57 EDRTIKGRNGDIRVRVYQQKPDSPVLVYYHGGG   89 (311)
T ss_dssp             EEEEEEETTEEEEEEEEESSSSEEEEEEECCST
T ss_pred             EEEEEeCCCCcEEEEEEcCCCCceEEEEEcCCC
Confidence            457788999999988876 77889999999743

>d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Epoxide hydrolase
domain: Bacterial epoxide hydrolase
species: Agrobacterium radiobacter [TaxId: 358]

Probab=82.94  E-value=1.3  Score=25.88  Aligned_cols=43  Identities=12%  Similarity=-0.094  Sum_probs=33.9

Q ss_pred             CCCeeEEEeCCCceEEEEEecCCCCCeEEEcccccccceecchhhh
Q 035266           17 FGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFFHF   62 (69)
Q Consensus        17 ~~~~Eh~V~T~~G~v~V~v~Gd~~kPailTYHDlGLNh~ScF~~fF   62 (69)
                      .+-+.+.|+++...|++...|+  .|+||-.|-+|-+.. +|..+.
T Consensus         6 ~~~~~~~~~~~~~~l~y~~~G~--gp~vv~lHG~~~~~~-~~~~~~   48 (293)
T d1ehya_           6 EDFKHYEVQLPDVKIHYVREGA--GPTLLLLHGWPGFWW-EWSKVI   48 (293)
T ss_dssp             GGSCEEEEECSSCEEEEEEEEC--SSEEEEECCSSCCGG-GGHHHH
T ss_pred             CCCcceEEEECCEEEEEEEECC--CCeEEEECCCCCCHH-HHHHHH
Confidence            3447789999988999999995  588999999998765 466554