Citrus Sinensis ID: 035610

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140----
Protein Sequence
MENVWRASSGQDPNPVDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESEVVEYDSKW
Secondary Structure (PSIPRED)
cccHHHHHccccccccccccccccccccEEEEEEEcccccccEEEEEEEEEccEEEEEEEcccccccccccEEEEcccEEEEEccccccccccEEEEEEccEEEEEEcccHHHHHHHHHHHHHHHHHHccccccccEEcccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHcccccccccccEEEEEccccccHHHHccccEEEEEEEEEEEEccEEEEEEcccccccccccccEEEcccEEEEEEcccccccccEEEEEccccEEEEEcccHHHHHHHHHHHHHHHHccccccccccEEEccccc
Coil and Loop (DISEMBL)
menvwrassgqdpnpvdykgiefwsqpgaigpankqgdYIKTWLRRWFILKQgehfwfkdshnitrgstprgfipvgtcltvkcaedvlnkpfafehsrggytmysvadtekekgERINSIGRAIVQHSRSVTESEVVEYDSKW
Flexible Loop (DISEMBL)
menvwrassgqdpnpvDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPfafehsrggytMYSVADTEKEKGERINSIgraivqhsrsvtesevveydskw
Low Complexity Region (SEG)
MENVWRASSGQDPNPVDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESEVVEYDSKW
Disordered region (IsUnstruct)
****************DYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVA************************************
Disordered Region (DISOPRED)
**************************PGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERINSIG****************EY****
Disordered Region (DISEMBL)
***********DPNPVDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQ*****************
Disordered Region (DISPRO)
*******SSGQDPNPVDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESEVVEY****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MENVWRASSGQDPNPVDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESEVVEYDSKW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	144	2.2.26 [Sep-21-2011]
Q9ST43	145	Pleckstrin homology domai	yes	no	0.993	0.986	0.666	4e-50
Q80YW0	393	Cytohesin-4 OS=Mus muscul	yes	no	0.388	0.142	0.419	0.0007
Q55GV3	477	Serine/threonine-protein	yes	no	0.576	0.174	0.319	0.0008

>sp|Q9ST43|PH1_ARATH Pleckstrin homology domain-containing protein 1 OS=Arabidopsis thaliana GN=PH1 PE=2 SV=2

 Score =  196 bits (498), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 96/144 (66%), Positives = 113/144 (78%), Gaps = 1/144 (0%)

Query: 1   MENVWRASSGQDPNPVDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKD 60
           ME++WR ++GQDP+  DY+GIEFWS P   G   KQGDYIKTW RRWF+LK+G+  WFKD
Sbjct: 1   MESIWRIATGQDPSREDYEGIEFWSNPERSGWLTKQGDYIKTWRRRWFVLKRGKLLWFKD 60

Query: 61  SHNI-TRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERIN 119
                 RGSTPRG I VG CLTVK AEDV+NKPFAFE S G YTM+ +AD EKEK E IN
Sbjct: 61  QAAAGIRGSTPRGVISVGDCLTVKGAEDVVNKPFAFELSSGSYTMFFIADNEKEKEEWIN 120

Query: 120 SIGRAIVQHSRSVTESEVVEYDSK 143
           SIGR+IVQHSRSVT+SEV++YD +
Sbjct: 121 SIGRSIVQHSRSVTDSEVLDYDHR 144

Binds specifically to phosphatidylinositol 3-phosphate (PtdIns3P), but not to other phosphoinositides.
Arabidopsis thaliana (taxid: 3702)

>sp|Q80YW0|CYH4_MOUSE Cytohesin-4 OS=Mus musculus GN=Cyth4 PE=2 SV=1

 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 6/62 (9%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
           K G  +KTW RRWFIL     ++F+     T    PRG IP+   L+V+  ED   KPF 
Sbjct: 268 KLGGRVKTWKRRWFILTDNCLYYFE----FTTDKEPRGIIPLEN-LSVQKVEDP-KKPFC 321

Query: 95  FE 96
            E
Sbjct: 322 LE 323

Promotes guanine-nucleotide exchange on ARF1 and ARF5. Promotes the activation of ARF through replacement of GDP with GTP.

Mus musculus (taxid: 10090)

>sp|Q55GV3|PAKC_DICDI Serine/threonine-protein kinase pakC OS=Dictyostelium discoideum GN=pakC PE=1 SV=2

 Score = 42.7 bits (99), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 11/94 (11%)

Query: 23  FWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTV 82
            W  P   G   KQG  +K W +R FI++    F+FKD     +   P G +P+      
Sbjct: 10  LWKSPDKEGELKKQGHVVKNWKKRKFIIQNDMLFYFKD-----KEERPVGAVPLRMS--- 61

Query: 83  KCAED-VLNKPFAFE--HSRGGYTMYSVADTEKE 113
           +C E+  L KP  FE    R   T +  A+T  E
Sbjct: 62  RCYENKSLGKPNCFELVSPRINKTFFIQANTPDE 95

Has role in the regulation of chemotaxis.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
297822693	145	hypothetical protein ARALYDRAFT_481886 [	0.993	0.986	0.680	2e-49
224106281	143	predicted protein [Populus trichocarpa]	0.979	0.986	0.683	2e-49
224059304	144	predicted protein [Populus trichocarpa]	0.979	0.979	0.683	2e-48
225434632	143	PREDICTED: pleckstrin homology domain-co	0.986	0.993	0.678	2e-48
18402122	145	Pleckstrin homology domain-containing pr	0.993	0.986	0.666	3e-48
5926716	145	AtPH1 [Arabidopsis thaliana]	0.993	0.986	0.666	4e-48
255569315	144	plekhh protein, putative [Ricinus commun	0.979	0.979	0.683	5e-48
449450806	149	PREDICTED: pleckstrin homology domain-co	0.986	0.953	0.652	1e-47
356501146	148	PREDICTED: pleckstrin homology domain-co	0.979	0.952	0.640	1e-46
351723457	146	uncharacterized protein LOC100527890 [Gl	0.979	0.965	0.633	2e-46

>gi|297822693|ref|XP_002879229.1| hypothetical protein ARALYDRAFT_481886 [Arabidopsis lyrata subsp. lyrata] gi|297325068|gb|EFH55488.1| hypothetical protein ARALYDRAFT_481886 [Arabidopsis lyrata subsp. lyrata]

 Score =  200 bits (508), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 98/144 (68%), Positives = 114/144 (79%), Gaps = 1/144 (0%)

Query: 1   MENVWRASSGQDPNPVDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKD 60
           ME++WR ++GQDPN  DY+GIEFWS P   G   KQGDYIKTW RRWF+LK+G+  WFKD
Sbjct: 1   MESIWRIATGQDPNREDYEGIEFWSNPERSGWLTKQGDYIKTWRRRWFVLKRGKLLWFKD 60

Query: 61  SHNI-TRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERIN 119
                TRGSTPRG I VG CLTVK AEDV+NKPFAFE S G YTM+ +AD EKEK E IN
Sbjct: 61  QAAAGTRGSTPRGVISVGDCLTVKGAEDVVNKPFAFELSSGSYTMFFIADNEKEKEEWIN 120

Query: 120 SIGRAIVQHSRSVTESEVVEYDSK 143
           SIGR+IVQHSRSVT+SEV++YD +
Sbjct: 121 SIGRSIVQHSRSVTDSEVLDYDHR 144

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224106281|ref|XP_002314112.1| predicted protein [Populus trichocarpa] gi|222850520|gb|EEE88067.1| predicted protein [Populus trichocarpa]

 Score =  199 bits (507), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 97/142 (68%), Positives = 114/142 (80%), Gaps = 1/142 (0%)

Query: 1   MENVWRASSGQDPNPVDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKD 60
           ME++ R+ +GQDPNP DY+ IEFWS P   G   KQGDYIKTW RRWF+LKQG+  WFK+
Sbjct: 1   MESILRSLTGQDPNPDDYRNIEFWSDPERSGWLTKQGDYIKTWRRRWFVLKQGKLLWFKE 60

Query: 61  SHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERINS 120
             ++TRGS PRG IPVG CLTVK AEDVLNKP+AFE S    TMY +AD+EKEK E INS
Sbjct: 61  -RSVTRGSIPRGVIPVGKCLTVKGAEDVLNKPYAFELSTSQETMYFIADSEKEKEEWINS 119

Query: 121 IGRAIVQHSRSVTESEVVEYDS 142
           IGR+IVQHSRSVT+SE+V+YDS
Sbjct: 120 IGRSIVQHSRSVTDSEIVDYDS 141

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224059304|ref|XP_002299816.1| predicted protein [Populus trichocarpa] gi|118483582|gb|ABK93688.1| unknown [Populus trichocarpa] gi|222847074|gb|EEE84621.1| predicted protein [Populus trichocarpa]

 Score =  197 bits (500), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 97/142 (68%), Positives = 113/142 (79%), Gaps = 1/142 (0%)

Query: 1   MENVWRASSGQDPNPVDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKD 60
           ME++ R+ +GQDPNP DY+ I+FWS P   G   KQGDYIKTW RRWF+LKQG+  WFKD
Sbjct: 1   MESLLRSLTGQDPNPDDYRNIDFWSDPERSGWLTKQGDYIKTWRRRWFVLKQGKLVWFKD 60

Query: 61  SHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERINS 120
             N+TRGS PRG IPVG CLTVK AEDVLNKP+AFE S    TM+ +AD+EKEK E INS
Sbjct: 61  -RNVTRGSIPRGAIPVGKCLTVKGAEDVLNKPYAFELSTSQETMFFIADSEKEKEEWINS 119

Query: 121 IGRAIVQHSRSVTESEVVEYDS 142
           IGR+IVQ SRSVT+SEVV+YDS
Sbjct: 120 IGRSIVQQSRSVTDSEVVDYDS 141

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434632|ref|XP_002279631.1| PREDICTED: pleckstrin homology domain-containing protein 1 [Vitis vinifera] gi|147863745|emb|CAN83611.1| hypothetical protein VITISV_035612 [Vitis vinifera]

 Score =  196 bits (499), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 97/143 (67%), Positives = 114/143 (79%), Gaps = 1/143 (0%)

Query: 1   MENVWRASSGQDPNPVDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKD 60
           ME +WRA++G DP P DY+G++FWS P   G   KQG+YIKTW RRWF+LK+G+ FWFKD
Sbjct: 1   MEGLWRAAAGLDPKPEDYEGVDFWSTPERAGWLTKQGEYIKTWRRRWFVLKRGKLFWFKD 60

Query: 61  SHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERINS 120
           S+ +T  S PRG IPVGTCLTVK AEDVLNK FAFE S    TMY +AD+EKEK E INS
Sbjct: 61  SY-VTHDSKPRGVIPVGTCLTVKGAEDVLNKQFAFELSTNRDTMYFIADSEKEKEEWINS 119

Query: 121 IGRAIVQHSRSVTESEVVEYDSK 143
           IGR+IVQHSRSVT+SEVV+YD K
Sbjct: 120 IGRSIVQHSRSVTDSEVVDYDCK 142

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18402122|ref|NP_565687.1| Pleckstrin homology domain-containing protein 1 [Arabidopsis thaliana] gi|54036216|sp|Q9ST43.2|PH1_ARATH RecName: Full=Pleckstrin homology domain-containing protein 1; Short=AtPH1 gi|3582339|gb|AAC35236.1| expressed protein [Arabidopsis thaliana] gi|15215632|gb|AAK91361.1| At2g29700/T27A16.20 [Arabidopsis thaliana] gi|20334886|gb|AAM16199.1| At2g29700/T27A16.20 [Arabidopsis thaliana] gi|21537127|gb|AAM61468.1| AtPH1 [Arabidopsis thaliana] gi|330253201|gb|AEC08295.1| Pleckstrin homology domain-containing protein 1 [Arabidopsis thaliana]

 Score =  196 bits (498), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 96/144 (66%), Positives = 113/144 (78%), Gaps = 1/144 (0%)

Query: 1   MENVWRASSGQDPNPVDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKD 60
           ME++WR ++GQDP+  DY+GIEFWS P   G   KQGDYIKTW RRWF+LK+G+  WFKD
Sbjct: 1   MESIWRIATGQDPSREDYEGIEFWSNPERSGWLTKQGDYIKTWRRRWFVLKRGKLLWFKD 60

Query: 61  SHNI-TRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERIN 119
                 RGSTPRG I VG CLTVK AEDV+NKPFAFE S G YTM+ +AD EKEK E IN
Sbjct: 61  QAAAGIRGSTPRGVISVGDCLTVKGAEDVVNKPFAFELSSGSYTMFFIADNEKEKEEWIN 120

Query: 120 SIGRAIVQHSRSVTESEVVEYDSK 143
           SIGR+IVQHSRSVT+SEV++YD +
Sbjct: 121 SIGRSIVQHSRSVTDSEVLDYDHR 144

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|5926716|dbj|BAA84651.1| AtPH1 [Arabidopsis thaliana]

 Score =  196 bits (497), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 96/144 (66%), Positives = 113/144 (78%), Gaps = 1/144 (0%)

Query: 1   MENVWRASSGQDPNPVDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKD 60
           ME++WR ++GQDP+  DY+GIEFWS P   G   KQGDYIKTW RRWF+LK+G+  WFKD
Sbjct: 1   MESMWRIATGQDPSREDYEGIEFWSNPERSGWLTKQGDYIKTWRRRWFVLKRGKLLWFKD 60

Query: 61  SHNI-TRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERIN 119
                 RGSTPRG I VG CLTVK AEDV+NKPFAFE S G YTM+ +AD EKEK E IN
Sbjct: 61  QAAAGIRGSTPRGVISVGDCLTVKGAEDVVNKPFAFELSSGSYTMFFIADNEKEKEEWIN 120

Query: 120 SIGRAIVQHSRSVTESEVVEYDSK 143
           SIGR+IVQHSRSVT+SEV++YD +
Sbjct: 121 SIGRSIVQHSRSVTDSEVLDYDHR 144

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255569315|ref|XP_002525625.1| plekhh protein, putative [Ricinus communis] gi|223535061|gb|EEF36743.1| plekhh protein, putative [Ricinus communis]

 Score =  195 bits (496), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 97/142 (68%), Positives = 112/142 (78%), Gaps = 1/142 (0%)

Query: 1   MENVWRASSGQDPNPVDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKD 60
           ME+  R+ +GQDPNP DYK IEFWS P   G   KQG+YIKTW RRWFILKQG+  WFK+
Sbjct: 1   MESFLRSWTGQDPNPEDYKKIEFWSNPERAGWLTKQGNYIKTWRRRWFILKQGKLLWFKE 60

Query: 61  SHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERINS 120
            H +TR S PRG +PVG CLTVK AEDV+NKPFAFE S    TMY +AD+EKEK E INS
Sbjct: 61  KH-VTRHSIPRGVVPVGQCLTVKGAEDVINKPFAFELSTNQETMYFIADSEKEKEEWINS 119

Query: 121 IGRAIVQHSRSVTESEVVEYDS 142
           IGR+IVQHSRSVT+SEVV+YD+
Sbjct: 120 IGRSIVQHSRSVTDSEVVDYDN 141

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450806|ref|XP_004143153.1| PREDICTED: pleckstrin homology domain-containing protein 1-like isoform 1 [Cucumis sativus] gi|449530337|ref|XP_004172152.1| PREDICTED: pleckstrin homology domain-containing protein 1-like isoform 1 [Cucumis sativus]

 Score =  194 bits (492), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 94/144 (65%), Positives = 119/144 (82%), Gaps = 2/144 (1%)

Query: 1   MENVWRASSGQDPNPVDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKD 60
           ME++WRA++GQDP+P DYKG+EFW+ P   G  NKQG+Y++TW RRWF+LK+G+ FWFKD
Sbjct: 6   MESLWRAATGQDPSPEDYKGVEFWTSPERAGWLNKQGEYLRTWRRRWFVLKRGKLFWFKD 65

Query: 61  SHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGY-TMYSVADTEKEKGERIN 119
           S  +TR S PRG IPV TCLTVK AED+L+KP AFE S  G  TMY +A++E+EK E IN
Sbjct: 66  SI-VTRASIPRGVIPVNTCLTVKGAEDILHKPCAFELSTTGQDTMYFIAESEREKEEWIN 124

Query: 120 SIGRAIVQHSRSVTESEVVEYDSK 143
           SIGR+IVQ+SRSVTESEVV+YD++
Sbjct: 125 SIGRSIVQNSRSVTESEVVDYDNR 148

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356501146|ref|XP_003519389.1| PREDICTED: pleckstrin homology domain-containing protein 1-like [Glycine max]

 Score =  191 bits (484), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 91/142 (64%), Positives = 111/142 (78%), Gaps = 1/142 (0%)

Query: 1   MENVWRASSGQDPNPVDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKD 60
           M ++WRA++G   N  DY G+EFWS P   G   KQG+YIKTW RRWF+LKQG+ FWFK+
Sbjct: 1   MASLWRAATGMTENATDYDGVEFWSNPERTGWLTKQGEYIKTWRRRWFVLKQGKLFWFKE 60

Query: 61  SHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERINS 120
           S ++TR S PRG +PV TCLTVK AED+LNKP AFE S    TMY +AD+EKEK + INS
Sbjct: 61  S-SVTRASRPRGVVPVATCLTVKGAEDILNKPNAFELSTRSDTMYFIADSEKEKEDWINS 119

Query: 121 IGRAIVQHSRSVTESEVVEYDS 142
           IGR+IVQHSRSVT+SE+V+YDS
Sbjct: 120 IGRSIVQHSRSVTDSEIVDYDS 141

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723457|ref|NP_001235232.1| uncharacterized protein LOC100527890 [Glycine max] gi|255633474|gb|ACU17095.1| unknown [Glycine max]

 Score =  190 bits (483), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 90/142 (63%), Positives = 110/142 (77%), Gaps = 1/142 (0%)

Query: 1   MENVWRASSGQDPNPVDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKD 60
           M ++WRA++G   N  DY G+EFWS P   G   KQG+YIKTW RRWF+LKQG+ FWFKD
Sbjct: 1   MASLWRAATGMTDNATDYDGVEFWSNPERTGWLTKQGEYIKTWRRRWFVLKQGKLFWFKD 60

Query: 61  SHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERINS 120
           S  +TR S PRG +PV TCLTVK AED+LNKP AFE S    TMY +AD+EKEK + INS
Sbjct: 61  SA-VTRASRPRGVVPVATCLTVKGAEDILNKPNAFELSTRSDTMYFIADSEKEKEDWINS 119

Query: 121 IGRAIVQHSRSVTESEVVEYDS 142
           IGR+IVQHSRSVT+SE+++YD+
Sbjct: 120 IGRSIVQHSRSVTDSEIIDYDN 141

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
TAIR|locus:2060625	145	PH1 "pleckstrin homologue 1" [	0.993	0.986	0.666	1.1e-48
TAIR|locus:2166349	144	AT5G05710 [Arabidopsis thalian	0.986	0.986	0.625	1.7e-43
UNIPROTKB|H0Y724	147	CYTH4 "Cytohesin-4" [Homo sapi	0.444	0.435	0.388	7e-06
FB|FBgn0086779	727	step "steppke" [Drosophila mel	0.673	0.133	0.317	1.3e-05
UNIPROTKB|E1C6N8	737	ARHGAP24 "Uncharacterized prot	0.625	0.122	0.330	1.4e-05
ZFIN|ZDB-GENE-061009-33	411	si:dkey-165i8.2 "si:dkey-165i8	0.666	0.233	0.336	2.1e-05
UNIPROTKB|E2RFM4	749	ARHGAP24 "Uncharacterized prot	0.625	0.120	0.339	2.3e-05
RGD|1306669	748	Arhgap24 "Rho GTPase activatin	0.625	0.120	0.330	0.0001
ZFIN|ZDB-GENE-050419-75	1208	plekha7a "pleckstrin homology	0.638	0.076	0.3	0.00014
DICTYBASE|DDB_G0267450	477	pakC "PAKA subfamily protein k	0.625	0.188	0.297	0.00015

TAIR|locus:2060625 PH1 "pleckstrin homologue 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 96/144 (66%), Positives = 113/144 (78%)

Query:     1 MENVWRASSGQDPNPVDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKD 60
             ME++WR ++GQDP+  DY+GIEFWS P   G   KQGDYIKTW RRWF+LK+G+  WFKD
Sbjct:     1 MESIWRIATGQDPSREDYEGIEFWSNPERSGWLTKQGDYIKTWRRRWFVLKRGKLLWFKD 60

Query:    61 SHNI-TRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERIN 119
                   RGSTPRG I VG CLTVK AEDV+NKPFAFE S G YTM+ +AD EKEK E IN
Sbjct:    61 QAAAGIRGSTPRGVISVGDCLTVKGAEDVVNKPFAFELSSGSYTMFFIADNEKEKEEWIN 120

Query:   120 SIGRAIVQHSRSVTESEVVEYDSK 143
             SIGR+IVQHSRSVT+SEV++YD +
Sbjct:   121 SIGRSIVQHSRSVTDSEVLDYDHR 144

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0007165 "signal transduction" evidence=ISS

GO:0035091 "phosphatidylinositol binding" evidence=ISS

TAIR|locus:2166349 AT5G05710 [Arabidopsis thaliana (taxid:3702)]

 Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
 Identities = 90/144 (62%), Positives = 110/144 (76%)

Query:     1 MENVWRAS-SGQDPNPVDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFK 59
             M ++WRA   GQ+ N  DY G+EFWS P   G   KQG+YIKTW RRWF+LKQG+ FWFK
Sbjct:     1 MASLWRAVIGGQNNNSEDYGGVEFWSNPERTGWLTKQGEYIKTWRRRWFVLKQGKLFWFK 60

Query:    60 DSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERIN 119
             DS ++TR S PRG +PV +CLT K AEDVLNK  AFE S    TMY +AD+EKEK + IN
Sbjct:    61 DS-DVTRVSRPRGVVPVESCLTAKGAEDVLNKQNAFELSTRNETMYFIADSEKEKEDWIN 119

Query:   120 SIGRAIVQHSRSVTESEVVEYDSK 143
             SIGR+IVQ+SRSVT+SE+V+YD+K
Sbjct:   120 SIGRSIVQNSRSVTDSEIVDYDNK 143

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

UNIPROTKB|H0Y724 CYTH4 "Cytohesin-4" [Homo sapiens (taxid:9606)]

 Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 28/72 (38%), Positives = 38/72 (52%)

Query:    25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKC 84
             SQ G    A++ G  +KTW RRWFIL     ++F+     T    PRG IP+   L+V+ 
Sbjct:    13 SQAG--DSASRAGGRVKTWKRRWFILTDNCLYYFE----FTTDKEPRGIIPLEN-LSVQK 65

Query:    85 AEDVLNKPFAFE 96
              +D   KPF  E
Sbjct:    66 VDDP-KKPFCLE 76

GO:0005543 "phospholipid binding" evidence=IEA

FB|FBgn0086779 step "steppke" [Drosophila melanogaster (taxid:7227)]

 Score = 113 (44.8 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 34/107 (31%), Positives = 52/107 (48%)

Query:    35 KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
             KQG   K+W RRWFIL     ++F+     T    PRG IP+   ++V+   D  +KP  
Sbjct:   602 KQGGRYKSWKRRWFILNDNCLYYFE----YTTDKEPRGIIPLEN-ISVREIHD-RSKPHC 655

Query:    95 FE-HSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESEVVEY 140
             FE  + GG  +     T+ E G+ +   G+  V    + TE +  E+
Sbjct:   656 FELFATGGADIIKACKTDSE-GKVVE--GKHTVYRMSAATEEDQQEW 699

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=ISS;IBA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA

GO:0040018 "positive regulation of multicellular organism growth" evidence=IMP

GO:0005802 "trans-Golgi network" evidence=IBA

GO:0005886 "plasma membrane" evidence=IBA

GO:0016192 "vesicle-mediated transport" evidence=IBA

GO:0030155 "regulation of cell adhesion" evidence=IBA

UNIPROTKB|E1C6N8 ARHGAP24 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 113 (44.8 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 35/106 (33%), Positives = 49/106 (46%)

Query:    31 GPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRG--FIPVGTCLTVKCAEDV 88
             G   KQG ++KTW  RWF+LK  + ++FKD   I     P G  F+P    +   C E+ 
Sbjct:    15 GWLRKQGGFVKTWHTRWFVLKGDQLYYFKDEDEIK----PLGAIFLPGNRVIEHPCNEES 70

Query:    89 LNKPFAFEHSRGG---------YTMYSVADTEKEKGERINSIGRAI 125
               K F FE   GG          T   +A T+ +  + + SI R I
Sbjct:    71 PGK-FLFEVVPGGDRERMTANHETYLLMASTQNDMEDWVKSIRRVI 115

GO:0005543 "phospholipid binding" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

ZFIN|ZDB-GENE-061009-33 si:dkey-165i8.2 "si:dkey-165i8.2" [Danio rerio (taxid:7955)]

 Score = 108 (43.1 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 38/113 (33%), Positives = 57/113 (50%)

Query:    35 KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
             K+G  IKTW RRWFIL  G  ++F+     T    P+G IP+   L VK  +D  +K F 
Sbjct:   281 KEGGRIKTWKRRWFILTDGCLYYFQ----YTTDKEPKGIIPLEN-LCVKEVDDP-HKQFC 334

Query:    95 FEHSRGGYTMYSVADTEKEKGERINSIGRAIV--QHSRSV-TESEVVEYDSKW 144
              E     Y+++   +T K    +  + GR ++   HS  + T SE  E  ++W
Sbjct:   335 LEV----YSLHQKGETIKAC--KTETDGRVVMGKHHSYKLSTASE--EERAEW 379

GO:0005543 "phospholipid binding" evidence=IEA

GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IEA

UNIPROTKB|E2RFM4 ARHGAP24 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 111 (44.1 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 36/106 (33%), Positives = 51/106 (48%)

Query:    31 GPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRG--FIPVGTCLTVKCAEDV 88
             G   KQG ++KTW  RWF+LK  + ++FKD    T+   P G  F+P    L   C E+ 
Sbjct:    24 GWLRKQGGFVKTWHTRWFVLKGDQLYYFKDEDE-TK---PLGTIFLPGNKVLEHPCNEES 79

Query:    89 LNKPFAFEHSRGG--------YTMYSV-ADTEKEKGERINSIGRAI 125
               K F FE   GG        +  Y + A T+ +  + + SI R I
Sbjct:    80 PGK-FLFEVVPGGDRDRMTANHESYLLMASTQNDMEDWVKSIRRVI 124

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

RGD|1306669 Arhgap24 "Rho GTPase activating protein 24" [Rattus norvegicus (taxid:10116)]

 Score = 105 (42.0 bits), Expect = 0.00010, P = 0.00010
 Identities = 35/106 (33%), Positives = 50/106 (47%)

Query:    31 GPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRG--FIPVGTCLTVKCAEDV 88
             G   KQG ++KTW  RWF+LK  +  +FKD    T+   P G  F+P    +   C E+ 
Sbjct:    23 GWLRKQGGFVKTWHTRWFVLKGDQLHYFKDEDE-TK---PLGTIFLPGNKVIEHPCNEES 78

Query:    89 LNKPFAFEHSRGG--------YTMYSV-ADTEKEKGERINSIGRAI 125
               K F FE   GG        +  Y + A T+ +  + + SI R I
Sbjct:    79 PGK-FLFEVVPGGERDRMTANHESYLLMASTQNDMEDWVKSIRRVI 123

GO:0001525 "angiogenesis" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0005925 "focal adhesion" evidence=IEA;ISO

GO:0007165 "signal transduction" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0030675 "Rac GTPase activator activity" evidence=ISO

GO:0032863 "activation of Rac GTPase activity" evidence=ISO

GO:0035021 "negative regulation of Rac protein signal transduction" evidence=ISO

GO:0035313 "wound healing, spreading of epidermal cells" evidence=ISO

GO:0042995 "cell projection" evidence=IEA

GO:1900028 "negative regulation of ruffle assembly" evidence=ISO

ZFIN|ZDB-GENE-050419-75 plekha7a "pleckstrin homology domain containing, family A member 7a" [Danio rerio (taxid:7955)]

 Score = 106 (42.4 bits), Expect = 0.00014, P = 0.00014
 Identities = 30/100 (30%), Positives = 53/100 (53%)

Query:    40 IKTWLRRWFILKQGEHFWFKDSHNIT-RGSTPRGFIPVGTCLTVKCAEDVLNKPFAF--E 96
             ++ W R+WF+L     F++KDS   +  GS P   +P  T   V   ED +++ +AF  E
Sbjct:   173 MRLWKRKWFVLADFCLFYYKDSREESVLGSIP---LPSYTIAPVG-PEDHISRKYAFKAE 228

Query:    97 HSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESE 136
             H+ G  T Y  ADT+++    + ++ +A +  + +V   E
Sbjct:   229 HT-GMRTYYFSADTQEDMNGWVRAMNQAALMQTHTVKRDE 267

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005813 "centrosome" evidence=ISS

GO:0045218 "zonula adherens maintenance" evidence=ISS

GO:0090136 "epithelial cell-cell adhesion" evidence=ISS

GO:0070097 "delta-catenin binding" evidence=ISS

GO:0005915 "zonula adherens" evidence=ISS

GO:0055007 "cardiac muscle cell differentiation" evidence=IMP

GO:0008016 "regulation of heart contraction" evidence=IMP

GO:0030054 "cell junction" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

DICTYBASE|DDB_G0267450 pakC "PAKA subfamily protein kinase" [Dictyostelium discoideum (taxid:44689)]

 Score = 100 (40.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
 Identities = 30/101 (29%), Positives = 44/101 (43%)

Query:    24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVK 83
             W  P   G   KQG  +K W +R FI++    F+FKD         P G +P+      +
Sbjct:    11 WKSPDKEGELKKQGHVVKNWKKRKFIIQNDMLFYFKDKEE-----RPVGAVPLRMS---R 62

Query:    84 CAEDV-LNKPFAFE--HSRGGYTMYSVADTEKEKGERINSI 121
             C E+  L KP  FE    R   T +  A+T  E    + ++
Sbjct:    63 CYENKSLGKPNCFELVSPRINKTFFIQANTPDEMASWMKAV 103

GO:0048365 "Rac GTPase binding" evidence=IPI

GO:0031273 "negative regulation of pseudopodium assembly" evidence=IMP

GO:0007163 "establishment or maintenance of cell polarity" evidence=IMP

GO:0000910 "cytokinesis" evidence=IMP

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006935 "chemotaxis" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ST43	PH1_ARATH	No assigned EC number	0.6666	0.9930	0.9862	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	144
cd13276	117	cd13276, PH_AtPH1, Arabidopsis thaliana Pleckstrin	3e-39
cd13282	96	cd13282, PH1_PLEKHH1_PLEKHH2, Pleckstrin homology	2e-08
cd13271	114	cd13271, PH2_TAPP1_2, Tandem PH-domain-containing	5e-08
cd01252	118	cd01252, PH_GRP1-like, General Receptor for Phosph	6e-08
smart00233	102	smart00233, PH, Pleckstrin homology domain	9e-07
cd13250	98	cd13250, PH_ACAP, ArfGAP with coiled-coil, ankyrin	7e-06
cd13281	139	cd13281, PH_PLEKHD1, Pleckstrin homology (PH) doma	7e-06
cd13301	108	cd13301, PH1_Pleckstrin_2, Pleckstrin 2 Pleckstrin	1e-05
cd10573	96	cd10573, PH_DAPP1, Dual Adaptor for Phosphotyrosin	1e-05
cd13248	104	cd13248, PH_PEPP1_2_3, Phosphoinositol 3-phosphate	1e-05
cd01241	121	cd01241, PH_PKB, Protein Kinase B-like pleckstrin	2e-05
pfam00169	101	pfam00169, PH, PH domain	3e-05
cd13308	113	cd13308, PH_3BP2, SH3 domain-binding protein 2 Ple	3e-05
cd00821	92	cd00821, PH, Pleckstrin homology (PH) domain	3e-05
cd13263	114	cd13263, PH_RhoGap25-like, Rho GTPase activating p	1e-04
cd13379	114	cd13379, PH_RhoGap24, Rho GTPase activating protei	1e-04
cd13296	111	cd13296, PH2_MyoX, Myosin X Pleckstrin homology (P	4e-04

>gnl|CDD|241430 cd13276, PH_AtPH1, Arabidopsis thaliana Pleckstrin homolog (PH) 1 (AtPH1) PH domain

 Score =  127 bits (322), Expect = 3e-39
 Identities = 66/120 (55%), Positives = 79/120 (65%), Gaps = 4/120 (3%)

Query: 21  IEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCL 80
           +EFWS P   G   KQG  IKTW RRWF+LKQG+ F+FKD       S PRG I +  CL
Sbjct: 1   VEFWSDPEKAGWLTKQGGSIKTWRRRWFVLKQGKLFYFKDE---DPDSEPRGVIDLSDCL 57

Query: 81  TVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRS-VTESEVVE 139
           TVK AE+  NK FAFE S    T Y +AD+EKEK E I++IGRAIV+ SRS  T  EV++
Sbjct: 58  TVKSAEEATNKEFAFEVSTPERTFYLIADSEKEKEEWISAIGRAIVKLSRSKGTIDEVLD 117

AtPH1 is expressed in all plant tissue and is proposed to be the plant homolog of human pleckstrin. Pleckstrin consists of two PH domains separated by a linker region, while AtPH has a single PH domain with a short N-terminal extension. AtPH1 binds PtdIns3P specifically and is thought to be an adaptor molecule since it has no obvious catalytic functions. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 117

>gnl|CDD|241436 cd13282, PH1_PLEKHH1_PLEKHH2, Pleckstrin homology (PH) domain containing, family H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain, repeat 1

 Score = 48.4 bits (116), Expect = 2e-08
 Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 6/88 (6%)

Query: 34  NKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPF 93
            K G  +KTW RRWF+LK GE F++K  +++ R   P+G I +     +  AE       
Sbjct: 6   TKLGGKVKTWKRRWFVLKNGELFYYKSPNDVIR--KPQGQIALDGSCEIARAEGAQ---- 59

Query: 94  AFEHSRGGYTMYSVADTEKEKGERINSI 121
            FE      T Y  AD+E +  E I  I
Sbjct: 60  TFEIVTEKRTYYLTADSENDLDEWIRVI 87

PLEKHH1 and PLEKHH2 (also called PLEKHH1L) are thought to function in phospholipid binding and signal transduction. There are 3 Human PLEKHH genes: PLEKHH1, PLEKHH2, and PLEKHH3. There are many isoforms, the longest of which contain a FERM domain, a MyTH4 domain, two PH domains, a peroximal domain, a vacuolar domain, and a coiled coil stretch. The FERM domain has a cloverleaf tripart structure (FERM_N, FERM_M, FERM_C/N, alpha-, and C-lobe/A-lobe, B-lobe, C-lobe/F1, F2, F3). The C-lobe/F3 within the FERM domain is part of the PH domain family. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 96

>gnl|CDD|241425 cd13271, PH2_TAPP1_2, Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, C-terminal repeat

 Score = 48.1 bits (115), Expect = 5e-08
 Identities = 30/103 (29%), Positives = 41/103 (39%), Gaps = 6/103 (5%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE--DVLNKP 92
           KQG   K W RR+FIL      ++K   +      P   IP+   L V      D+L + 
Sbjct: 16  KQGAVRKNWKRRYFILDDNTISYYKSETD----KEPLRTIPLKEVLKVHECLSGDLLMRD 71

Query: 93  FAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTES 135
             FE      T Y  AD+ ++    I +I  AIV        S
Sbjct: 72  NLFEIITTSRTFYIQADSPEDMHSWIKAISGAIVARRGPYRSS 114

The binding of TAPP1 (also called PLEKHA1/pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1) and TAPP2 (also called PLEKHA2) adaptors to PtdIns(3,4)P(2), but not PI(3,4, 5)P3, function as negative regulators of insulin and PI3K signalling pathways (i.e. TAPP/utrophin/syntrophin complex). TAPP1 and TAPP2 contain two sequential PH domains in which the C-terminal PH domain specifically binds PtdIns(3,4)P2 with high affinity. The N-terminal PH domain does not interact with any phosphoinositide tested. They also contain a C-terminal PDZ-binding motif that interacts with several PDZ-binding proteins, including PTPN13 (known previously as PTPL1 or FAP-1) as well as the scaffolding proteins MUPP1 (multiple PDZ-domain-containing protein 1), syntrophin and utrophin. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 114

>gnl|CDD|241283 cd01252, PH_GRP1-like, General Receptor for Phosphoinositides-1-like Pleckstrin homology (PH) domain

 Score = 47.7 bits (114), Expect = 6e-08
 Identities = 39/111 (35%), Positives = 52/111 (46%), Gaps = 26/111 (23%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
           K G  +K+W RRWFIL     ++F+     T    PRG IP+   L+V+  ED   KPF 
Sbjct: 11  KLGGRVKSWKRRWFILTDNCLYYFEY----TTDKEPRGIIPLEN-LSVREVED-SKKPFC 64

Query: 95  FE-HS------------------RGGYTMYS-VADTEKEKGERINSIGRAI 125
           FE +S                   G +T+Y   A TE+E  E I SI  +I
Sbjct: 65  FELYSPSNEVIKACKTDSDGKVVEGNHTVYRISAATEEEMDEWIKSIKASI 115

GRP1/cytohesin3 and the related proteins ARNO (ARF nucleotide-binding site opener)/cytohesin-2 and cytohesin-1 are ARF exchange factors that contain a pleckstrin homology (PH) domain thought to target these proteins to cell membranes through binding polyphosphoinositides. The PH domains of all three proteins exhibit relatively high affinity for PtdIns(3,4,5)P3. Within the Grp1 family, diglycine (2G) and triglycine (3G) splice variants, differing only in the number of glycine residues in the PH domain, strongly influence the affinity and specificity for phosphoinositides. The 2G variants selectively bind PtdIns(3,4,5)P3 with high affinity,the 3G variants bind PtdIns(3,4,5)P3 with about 30-fold lower affinity and require the polybasic region for plasma membrane targeting. These ARF-GEFs share a common, tripartite structure consisting of an N-terminal coiled-coil domain, a central domain with homology to the yeast protein Sec7, a PH domain, and a C-terminal polybasic region. The Sec7 domain is autoinhibited by conserved elements proximal to the PH domain. GRP1 binds to the DNA binding domain of certain nuclear receptors (TRalpha, TRbeta, AR, ER, but not RXR), and can repress thyroid hormone receptor (TR)-mediated transactivation by decreasing TR-complex formation on thyroid hormone response elements. ARNO promotes sequential activation of Arf6, Cdc42 and Rac1 and insulin secretion. Cytohesin acts as a PI 3-kinase effector mediating biological responses including cell spreading and adhesion, chemotaxis, protein trafficking, and cytoskeletal rearrangements, only some of which appear to depend on their ability to activate ARFs. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 118

>gnl|CDD|214574 smart00233, PH, Pleckstrin homology domain

 Score = 44.5 bits (105), Expect = 9e-07
 Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 5/94 (5%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED--VLNKP 92
           K G   K+W +R+F+L      ++K   +  +   P+G I +  C TV+ A D     KP
Sbjct: 10  KSGGGKKSWKKRYFVLFNSTLLYYKSKKD-KKSYKPKGSIDLSGC-TVREAPDPDSSKKP 67

Query: 93  FAFE-HSRGGYTMYSVADTEKEKGERINSIGRAI 125
             FE  +    T+   A++E+E+ + + ++ +AI
Sbjct: 68  HCFEIKTSDRKTLLLQAESEEEREKWVEALRKAI 101

Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. Length = 102

>gnl|CDD|241404 cd13250, PH_ACAP, ArfGAP with coiled-coil, ankyrin repeat and PH domains Pleckstrin homology (PH) domain

 Score = 41.8 bits (99), Expect = 7e-06
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 7/86 (8%)

Query: 41  KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIP-VGTCLTVKCAEDVLNKPFAFEHSR 99
           KTW RRWF ++ G+  + K         TP   +  +  C TVK  ED+ ++ F FE   
Sbjct: 14  KTWKRRWFSIQNGQLVYQKRFKK----DTPTVVVEDLRLC-TVKPCEDI-DRRFCFEVVS 67

Query: 100 GGYTMYSVADTEKEKGERINSIGRAI 125
              +    A++E+++   I +I  AI
Sbjct: 68  PTKSYMLQAESEEDRQAWIQAIQAAI 93

ACAP (also called centaurin beta) functions both as a Rab35 effector and as an Arf6-GTPase-activating protein (GAP) by which it controls actin remodeling and membrane trafficking. ACAP contain an NH2-terminal bin/amphiphysin/Rvs (BAR) domain, a phospholipid-binding domain, a PH domain, a GAP domain, and four ankyrin repeats. The AZAPs constitute a family of Arf GAPs that are characterized by an NH2-terminal pleckstrin homology (PH) domain and a central Arf GAP domain followed by two or more ankyrin repeats. On the basis of sequence and domain organization, the AZAP family is further subdivided into four subfamilies: 1) the ACAPs contain an NH2-terminal bin/amphiphysin/Rvs (BAR) domain (a phospholipid-binding domain that is thought to sense membrane curvature), a single PH domain followed by the GAP domain, and four ankyrin repeats; 2) the ASAPs also contain an NH2-terminal BAR domain, the tandem PH domain/GAP domain, three ankyrin repeats, two proline-rich regions, and a COOH-terminal Src homology 3 domain; 3) the AGAPs contain an NH2-terminal GTPase-like domain (GLD), a split PH domain, and the GAP domain followed by four ankyrin repeats; and 4) the ARAPs contain both an Arf GAP domain and a Rho GAP domain, as well as an NH2-terminal sterile-a motif (SAM), a proline-rich region, a GTPase-binding domain, and five PH domains. PMID 18003747 and 19055940 Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 98

>gnl|CDD|241435 cd13281, PH_PLEKHD1, Pleckstrin homology (PH) domain containing, family D (with coiled-coil domains) member 1 PH domain

 Score = 42.7 bits (101), Expect = 7e-06
 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 10/81 (12%)

Query: 41  KTWLRRWFILKQGEHFWFKDSHNITRGST------PRGFIPVGTCLTVKCAEDVLNKPFA 94
             W +R+F+LK+    ++ +S       T      P+G IP+G C +++   D   +P+ 
Sbjct: 28  AKWSKRFFVLKECFLLYYAESEKKDFEKTRRFNIHPKGVIPLGGC-SIEAGRDP-GRPYC 85

Query: 95  FEHSRGGYT--MYSVADTEKE 113
           F  S   +   +   AD+E+E
Sbjct: 86  FLISHPDFKGSIILAADSEEE 106

Human PLEKHD1 (also called UPF0639, pleckstrin homology domain containing, family D (with M protein repeats) member 1) is a single transcript and contains a single PH domain. PLEKHD1 is conserved in human, chimpanzee, , dog, cow, mouse, chicken, zebrafish, and Caenorhabditis elegans. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 139

>gnl|CDD|241455 cd13301, PH1_Pleckstrin_2, Pleckstrin 2 Pleckstrin homology (PH) domain, repeat 1

 Score = 41.6 bits (98), Expect = 1e-05
 Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
           K+G  +  W  RWF+L + +  ++K        S+P+G I +  C       +   +P  
Sbjct: 11  KKGHVVNNWKARWFVLLEDKLEYYKK----KTDSSPKGMILLKGCTITSPCLEYEKRPLV 66

Query: 95  FE-HSRGGYTMYSVADTEKEKGERINSIGRAIV 126
           F+  +  G   +  A + +E+      I +AI 
Sbjct: 67  FKLTTAKGQDHFLQACSREERDAWAKDITKAIT 99

Pleckstrin is a protein found in platelets. This name is derived from platelet and leukocyte C kinase substrate and the KSTR string of amino acids. Pleckstrin 2 contains two PH domains and a DEP (dishvelled, egl-10, and pleckstrin) domain. Unlike pleckstrin 1, pleckstrin 2 does not contain obvious sites of PKC phosphorylation. Pleckstrin 2 plays a role in actin rearrangement, large lamellipodia and peripheral ruffle formation, and may help orchestrate cytoskeletal arrangement. The PH domains of pleckstrin 2 are thought to contribute to lamellipodia formation. This cd contains the first PH domain repeat. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 108

>gnl|CDD|241309 cd10573, PH_DAPP1, Dual Adaptor for Phosphotyrosine and 3-Phosphoinositides Pleckstrin homology (PH) domain

 Score = 40.7 bits (96), Expect = 1e-05
 Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 7/92 (7%)

Query: 31  GPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGST-PRGFIPVGTCLTVKCAEDVL 89
           G   KQG  +K W  RWF+L++ E  +FK     TR  T P   + +  C +V+ A+   
Sbjct: 7   GYLTKQGGIVKNWKTRWFVLRKNELKYFK-----TRTDTKPIRTLDLTECSSVQ-ADYSQ 60

Query: 90  NKPFAFEHSRGGYTMYSVADTEKEKGERINSI 121
            KP  F       T Y  A TE+E  E +  +
Sbjct: 61  GKPNCFRLVFPDRTFYMYAKTEEEADEWVKLL 92

DAPP1 (also known as PHISH/3' phosphoinositide-interacting SH2 domain-containing protein or Bam32) plays a role in B-cell activation and has potential roles in T-cell and mast cell function. DAPP1 promotes B cell receptor (BCR) induced activation of Rho GTPases Rac1 and Cdc42, which feed into mitogen-activated protein kinases (MAPK) activation pathways and affect cytoskeletal rearrangement. DAPP1can also regulate BCR-induced activation of extracellular signal-regulated kinase (ERK), and c-jun NH2-terminal kinase (JNK). DAPP1 contains an N-terminal SH2 domain and a C-terminal pleckstrin homology (PH) domain with a single tyrosine phosphorylation site located centrally. DAPP1 binds strongly to both PtdIns(3,4,5)P3 and PtdIns(3,4)P2. The PH domain is essential for plasma membrane recruitment of PI3K upon cell activation. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 96

>gnl|CDD|241402 cd13248, PH_PEPP1_2_3, Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain

 Score = 41.1 bits (97), Expect = 1e-05
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 9/94 (9%)

Query: 35  KQGDY-IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPV-GTCLTVKCAEDVLNKP 92
           KQG   +K W +RWF+LK    +++KD           G I +    ++     D +N+ 
Sbjct: 15  KQGGSGLKNWKKRWFVLKDNCLYYYKDPEEE----KALGSILLPSYTISPASPSDEINRK 70

Query: 93  FAF--EHSRGGYTMYSVADTEKEKGERINSIGRA 124
           FAF  EH  G  T Y  ADT++E  + + ++  A
Sbjct: 71  FAFKAEH-AGMRTYYFAADTQEEMEQWMKALSLA 103

PEPP1 (also called PLEKHA4/PH domain-containing family A member 4 and RHOXF1/Rhox homeobox family member 1), and related homologs PEPP2 (also called PLEKHA5/PH domain-containing family A member 5) and PEPP3 (also called PLEKHA6/PH domain-containing family A member 6), have PH domains that interact specifically with PtdIns(3,4)P3. Other proteins that bind PtdIns(3,4)P3 specifically are: TAPP1 (tandem PH-domain-containing protein-1) and TAPP2], PtdIns3P AtPH1, and Ptd- Ins(3,5)P2 (centaurin-beta2). All of these proteins contain at least 5 of the 6 conserved amino acids that make up the putative phosphatidylinositol 3,4,5- trisphosphate-binding motif (PPBM) located at their N-terminus. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 104

>gnl|CDD|241274 cd01241, PH_PKB, Protein Kinase B-like pleckstrin homology (PH) domain

 Score = 41.2 bits (97), Expect = 2e-05
 Identities = 27/109 (24%), Positives = 37/109 (33%), Gaps = 20/109 (18%)

Query: 31  GPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLN 90
           G   K+G+YIKTW  RWF+LK                   +G+        V      LN
Sbjct: 7   GWLTKRGEYIKTWRPRWFVLKSD-------------DGKFKGYKEKPQDKDVDPTPKPLN 53

Query: 91  KPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESEVVE 139
             F+    R   T     +  KE  E    I         +  E +V+E
Sbjct: 54  N-FSVAIKR---TYLIKTEKPKEVIENTFIIRCLQWT---TPDELKVIE 95

PKB (also called Akt), a member of the AGC kinase family, is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase which alters the activity of the targeted protein. The name AGC is based on the three proteins that it is most similar to cAMP-dependent protein kinase 1 (PKA; also known as PKAC), cGMP-dependent protein kinase (PKG; also known as CGK1) and protein kinase C (PKC). Human Akt has three isoforms derived for distinct genes: Akt1/PKBalpha, Akt2/PKBbeta, and Akt3/PKBgamma. All Akts have an N-terminal PH domain with an activating Thr phosphorylation site, a kinase domain, and a short C-terminal regulatory tail with an activating Ser phosphorylation site. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. The phosphorylation of Akt at its Thr and Ser phosphorylation sites leads to increased Akt activity toward forkhead transcription factors, the mammalian target of rapamycin (mTOR), and the Bcl-xL/Bcl-2-associated death promoter (BAD), all of which possess a consensus motif R-X-R-XX-ST-B (X = amino acid, B = bulky hydrophobic residue) for Akt phosphorylation. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 121

>gnl|CDD|215766 pfam00169, PH, PH domain

 Score = 40.1 bits (94), Expect = 3e-05
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 4/93 (4%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTC-LTVKCAEDVLNKPF 93
           K     K+W +R+F+L  G   ++KDS      S P+G IP+  C +T     +   +  
Sbjct: 10  KGSGGRKSWKKRYFVLFDGVLLYYKDSK--KSSSRPKGSIPLSGCQVTKVPDSEDGKRKN 67

Query: 94  AFE-HSRGGYTMYSVADTEKEKGERINSIGRAI 125
            FE  +    T    A++E+E+ E + +I  AI
Sbjct: 68  CFEIRTGDRETFLLQAESEEERKEWVKAIRSAI 100

PH stands for pleckstrin homology. Length = 101

>gnl|CDD|241462 cd13308, PH_3BP2, SH3 domain-binding protein 2 Pleckstrin homology (PH) domain

 Score = 40.5 bits (95), Expect = 3e-05
 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 10/101 (9%)

Query: 35  KQGDYIKT---WLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNK 91
           K+G   K    W  R+ I+ +G  ++FK+S +    + P+G   +         E    K
Sbjct: 17  KKGGSQKQLLKWPLRYVIIHKGCVYYFKNSQS----AKPKGVFSLNGYNRRAAEETTSKK 72

Query: 92  PFAF--EH-SRGGYTMYSVADTEKEKGERINSIGRAIVQHS 129
            F F   H S+   T Y  A +E E  E + S+ + I ++ 
Sbjct: 73  KFVFKIIHLSKDHRTWYFSAKSEDEMKEWMESLRKEIDRYC 113

SH3BP2 (the gene that encodes the adaptor protein 3BP2), HD, ITU, IT10C3, and ADD1 are located near the Huntington's Disease Gene on Human Chromosome 4pl6.3. SH3BP2 lies in a region that is often missing in individuals with Wolf-Hirschhorn syndrome (WHS). Gain of function mutations in SH3BP2 causes enhanced B-cell antigen receptor (BCR)-mediated activation of nuclear factor of activated T cells (NFAT), resulting in a rare, genetic disorder called cherubism. This results in an increase in the signaling complex formation with Syk, phospholipase C-gamma2 (PLC-gamma2), and Vav1. It was recently discovered that Tankyrase regulates 3BP2 stability through ADP-ribosylation and ubiquitylation by the E3-ubiquitin ligase. Cherubism mutations uncouple 3BP2 from Tankyrase-mediated protein destruction, which results in its stabilization and subsequent hyperactivation of the Src, Syk, and Vav signaling pathways. SH3BP2 is also a potential negative regulator of the abl oncogene. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 113

>gnl|CDD|241231 cd00821, PH, Pleckstrin homology (PH) domain

 Score = 40.0 bits (93), Expect = 3e-05
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 6/89 (6%)

Query: 31  GPANKQGDY-IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVL 89
           G   K+G   +K+W +RWF+L      ++K          P+G IP+   L V+      
Sbjct: 3   GWLKKRGGKGLKSWKKRWFVLFDDVLLYYKSKK--DSSKKPKGLIPLSDGLEVELVSS-S 59

Query: 90  NKPFAFE--HSRGGYTMYSVADTEKEKGE 116
            KP  FE      G T Y  A++E+E+ E
Sbjct: 60  GKPNCFELVTPDRGRTYYLQAESEEEREE 88

PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 92

>gnl|CDD|241417 cd13263, PH_RhoGap25-like, Rho GTPase activating protein 25 and related proteins Pleckstrin homology (PH) domain

 Score = 38.9 bits (91), Expect = 1e-04
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 7/69 (10%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKP-- 92
           KQG  +K W RRWF+L+  + +++KD       S P+G IP+    TVK       +P  
Sbjct: 11  KQGGIVKNWQRRWFVLRGDQLYYYKDEDE----SKPQGCIPLPGN-TVKELPFNPEEPGK 65

Query: 93  FAFEHSRGG 101
           F FE   G 
Sbjct: 66  FLFEIIPGD 74

RhoGAP25 (also called ArhGap25) like other RhoGaps are involved in cell polarity, cell morphology and cytoskeletal organization. They act as GTPase activators for the Rac-type GTPases by converting them to an inactive GDP-bound state and control actin remodeling by inactivating Rac downstream of Rho leading to suppress leading edge protrusion and promotes cell retraction to achieve cellular polarity and are able to suppress RAC1 and CDC42 activity in vitro. Overexpression of these proteins induces cell rounding with partial or complete disruption of actin stress fibers and formation of membrane ruffles, lamellipodia, and filopodia. This hierarchy contains RhoGAP22, RhoGAP24, and RhoGAP25. Members here contain an N-terminal PH domain followed by a RhoGAP domain and either a BAR or TATA Binding Protein (TBP) Associated Factor 4 (TAF4) domain. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 114

>gnl|CDD|241530 cd13379, PH_RhoGap24, Rho GTPase activating protein 24 Pleckstrin homology (PH) domain

 Score = 38.8 bits (90), Expect = 1e-04
 Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 12/100 (12%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
           KQG ++KTW  RWF+LK  + ++FKD        T   F+P        C E+   K F 
Sbjct: 11  KQGGFVKTWHTRWFVLKGDQLYYFKDEDETKPLGTI--FLPGNRVTEHPCNEEEPGK-FL 67

Query: 95  FEHSRGG---------YTMYSVADTEKEKGERINSIGRAI 125
           FE   GG          T   +A T+ +  + + SI R I
Sbjct: 68  FEVVPGGDRERMTANHETYLLMASTQNDMEDWVKSIRRVI 107

RhoGap24 (also called ARHGAP24, p73RhoGAp, and Filamin-A-associated RhoGAP) like other RhoGAPs are involved in cell polarity, cell morphology and cytoskeletal organization. They act as GTPase activators for the Rac-type GTPases by converting them to an inactive GDP-bound state and control actin remodeling by inactivating Rac downstream of Rho leading to suppress leading edge protrusion and promotes cell retraction to achieve cellular polarity and are able to suppress RAC1 and CDC42 activity in vitro. Overexpression of these proteins induces cell rounding with partial or complete disruption of actin stress fibers and formation of membrane ruffles, lamellipodia, and filopodia. Members here contain an N-terminal PH domain followed by a RhoGAP domain and either a BAR or TATA Binding Protein (TBP) Associated Factor 4 (TAF4) domain. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 114

>gnl|CDD|241450 cd13296, PH2_MyoX, Myosin X Pleckstrin homology (PH) domain, repeat 2

 Score = 37.4 bits (87), Expect = 4e-04
 Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 11/97 (11%)

Query: 41  KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG 100
           K W  RWF+L+     +++   N   G+   G I + +    K   D   K   F+ +  
Sbjct: 26  KNWKSRWFVLRDTVLKYYE---NDQEGAKALGTIDIRSA---KEIVDNTPKENGFDITTP 79

Query: 101 GYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESEV 137
             T + VA++ ++  +  + + R       S TE E+
Sbjct: 80  SRTYHFVAESPEDASQWFSVLTRVH-----SATEQEI 111

MyoX, a MyTH-FERM myosin, is a molecular motor that has crucial functions in the transport and/or tethering of integrins in the actin-based extensions known as filopodia, microtubule binding, and in netrin-mediated axon guidance. It functions as a dimer. MyoX walks on bundles of actin, rather than single filaments, unlike the other unconventional myosins. MyoX is present in organisms ranging from humans to choanoflagellates, but not in Drosophila and Caenorhabditis elegans.MyoX consists of a N-terminal motor/head region, a neck made of 3 IQ motifs, and a tail consisting of a coiled-coil domain, a PEST region, 3 PH domains, a myosin tail homology 4 (MyTH4), and a FERM domain at its very C-terminus. The first PH domain in the MyoX tail is a split-PH domain, interupted by the second PH domain such that PH 1a and PH 1b flanks PH 2. The third PH domain (PH 3) follows the PH 1b domain. This cd contains the second PH repeat. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 111

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	144
cd01264	101	PH_melted Melted pleckstrin homology (PH) domain.	99.92
cd01251	103	PH_centaurin_alpha Centaurin alpha Pleckstrin homo	99.92
cd01233	100	Unc104 Unc-104 pleckstrin homology (PH) domain. Un	99.91
cd01260	96	PH_CNK Connector enhancer of KSR (Kinase suppresso	99.89
cd01238	106	PH_Tec Tec pleckstrin homology (PH) domain. Tec pl	99.89
cd01265	95	PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain	99.89
cd01247	91	PH_GPBP Goodpasture antigen binding protein (GPBP)	99.89
cd01236	104	PH_outspread Outspread Pleckstrin homology (PH) do	99.88
cd01235	101	PH_SETbf Set binding factor Pleckstrin Homology (P	99.88
cd01257	101	PH_IRS Insulin receptor substrate (IRS) pleckstrin	99.88
cd01252	125	PH_cytohesin Cytohesin Pleckstrin homology (PH) do	99.87
cd01266	108	PH_Gab Gab (Grb2-associated binder) pleckstrin hom	99.85
cd01245	98	PH_RasGAP_CG5898 RAS GTPase-activating protein (GA	99.84
cd01246	91	PH_oxysterol_bp Oxysterol binding protein (OSBP) P	99.84
KOG0930	395	consensus Guanine nucleotide exchange factor Cytoh	99.84
cd01250	94	PH_centaurin Centaurin Pleckstrin homology (PH) do	99.82
cd01244	98	PH_RasGAP_CG9209 RAS_GTPase activating protein (GA	99.82
cd01241	102	PH_Akt Akt pleckstrin homology (PH) domain. Akt pl	99.8
PF00169	104	PH: PH domain; InterPro: IPR001849 The pleckstrin	99.79
cd01263	122	PH_anillin Anillin Pleckstrin homology (PH) domain	99.75
cd01219	101	PH_FGD FGD (faciogenital dysplasia protein) plecks	99.75
PF15409	89	PH_8: Pleckstrin homology domain	99.7
cd01254	121	PH_PLD Phospholipase D (PLD) pleckstrin homology (	99.69
cd01220	99	PH_CDEP Chondrocyte-derived ezrin-like domain cont	99.66
PF15413	112	PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FE	99.66
cd01256	110	PH_dynamin Dynamin pleckstrin homology (PH) domain	99.66
smart00233	102	PH Pleckstrin homology domain. Domain commonly fou	99.64
cd01253	104	PH_beta_spectrin Beta-spectrin pleckstrin homology	99.63
cd01230	117	PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6	99.61
cd01237	106	Unc112 Unc-112 pleckstrin homology (PH) domain. Un	99.54
cd00821	96	PH Pleckstrin homology (PH) domain. Pleckstrin hom	99.53
cd00900	99	PH-like Pleckstrin homology-like domain. Pleckstri	99.51
cd01218	104	PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain	99.42
PF15410	119	PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN	99.37
cd01234	117	PH_CADPS CADPS (Ca2+-dependent activator protein)	99.23
cd01239	117	PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin hom	99.22
KOG1090	1732	consensus Predicted dual-specificity phosphatase [	99.22
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.21
cd01261	112	PH_SOS Son of Sevenless (SOS) Pleckstrin homology	99.16
cd01242	112	PH_ROK Rok (Rho- associated kinase) pleckstrin hom	99.13
PF14593	104	PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.	99.1
KOG2059	800	consensus Ras GTPase-activating protein [Signal tr	99.06
KOG3640	1116	consensus Actin binding protein Anillin [Cell cycl	99.04
cd01243	122	PH_MRCK MRCK (myotonic dystrophy-related Cdc42-bin	99.0
cd01249	104	PH_oligophrenin Oligophrenin Pleckstrin homology (	98.88
KOG3723	851	consensus PH domain protein Melted [Signal transdu	98.82
cd01259	114	PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor pr	98.8
PLN00188	719	enhanced disease resistance protein (EDR2); Provis	98.8
PTZ00267	478	NIMA-related protein kinase; Provisional	98.68
cd01240	116	PH_beta-ARK Beta adrenergic receptor kinase 1(beta	98.66
cd01224	109	PH_Collybistin Collybistin pleckstrin homology (PH	98.64
cd01258	108	PH_syntrophin Syntrophin pleckstrin homology (PH)	98.64
cd01226	100	PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin	98.57
KOG0521	785	consensus Putative GTPase activating proteins (GAP	98.51
cd01262	89	PH_PDK1 3-Phosphoinositide dependent protein kinas	98.47
cd01225	111	PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-	98.41
cd01222	97	PH_clg Clg (common-site lymphoma/leukemia guanine	98.39
PLN02866	1068	phospholipase D	98.38
PF12814	123	Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin	98.37
KOG4424	623	consensus Predicted Rho/Rac guanine nucleotide exc	98.29
KOG1739	611	consensus Serine/threonine protein kinase GPBP [Si	98.24
KOG0248	936	consensus Cytoplasmic protein Max-1, contains PH,	98.07
KOG3751	622	consensus Growth factor receptor-bound proteins (G	98.04
cd01223	116	PH_Vav Vav pleckstrin homology (PH) domain. Vav pl	98.01
PTZ00283	496	serine/threonine protein kinase; Provisional	97.96
cd01221	125	PH_ephexin Ephexin Pleckstrin homology (PH) domain	97.87
KOG0932	774	consensus Guanine nucleotide exchange factor EFA6	97.77
PF15406	112	PH_6: Pleckstrin homology domain	97.63
KOG3531	1036	consensus Rho guanine nucleotide exchange factor C	97.61
KOG1117	1186	consensus Rho- and Arf-GTPase activating protein A	97.58
cd01228	96	PH_BCR-related BCR (breakpoint cluster region)-rel	97.57
KOG1117	1186	consensus Rho- and Arf-GTPase activating protein A	97.55
cd01231	107	PH_Lnk LNK-family Pleckstrin homology (PH) domain.	97.49
PF15408	104	PH_7: Pleckstrin homology domain	97.41
cd01232	114	PH_TRIO Trio pleckstrin homology (PH) domain. Trio	97.39
KOG1451	812	consensus Oligophrenin-1 and related Rho GTPase-ac	97.25
cd01248	115	PH_PLC Phospholipase C (PLC) pleckstrin homology (	96.93
KOG3543	1218	consensus Ca2+-dependent activator protein [Signal	96.68
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	96.31
KOG1737	799	consensus Oxysterol-binding protein [Lipid transpo	96.3
cd01227	133	PH_Dbs Dbs (DBL's big sister) pleckstrin homology	95.97
PF15411	116	PH_10: Pleckstrin homology domain	95.86
KOG1738	638	consensus Membrane-associated guanylate kinase-int	95.53
KOG3523	695	consensus Putative guanine nucleotide exchange fac	95.48
KOG3549	505	consensus Syntrophins (type gamma) [Extracellular	95.47
KOG4807	593	consensus F-actin binding protein, regulates actin	95.38
PF15405	135	PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.	95.07
KOG2070	661	consensus Guanine nucleotide exchange factor [Nucl	94.02
KOG4424	623	consensus Predicted Rho/Rac guanine nucleotide exc	93.46
KOG3551	506	consensus Syntrophins (type beta) [Extracellular s	93.25
cd01255	160	PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM	93.1
KOG3727	664	consensus Mitogen inducible gene product (contains	92.97
KOG0248	936	consensus Cytoplasmic protein Max-1, contains PH,	92.95
KOG1264	1267	consensus Phospholipase C [Lipid transport and met	90.56
KOG3531	1036	consensus Rho guanine nucleotide exchange factor C	87.49
PF08458	110	PH_2: Plant pleckstrin homology-like region; Inter	87.43
PF15404	185	PH_4: Pleckstrin homology domain	86.99
KOG4047	429	consensus Docking protein 1 (p62dok) [Signal trans	86.91
KOG2996	865	consensus Rho guanine nucleotide exchange factor V	86.17
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	86.11
KOG3520	1167	consensus Predicted guanine nucleotide exchange fa	81.42
KOG4407	1973	consensus Predicted Rho GTPase-activating protein	80.39

>cd01264 PH_melted Melted pleckstrin homology (PH) domain

Probab=99.92  E-value=1.3e-24  Score=139.49  Aligned_cols=94  Identities=22%  Similarity=0.279  Sum_probs=81.9

Q ss_pred             ceEEEEEeeCC---CCCCceeEEEEEeCCeEEEEecCCCCCCCCC-cceEEeCCceEEEeeccccC---CCCceEEEEeC
Q 035610           28 GAIGPANKQGD---YIKTWLRRWFILKQGEHFWFKDSHNITRGST-PRGFIPVGTCLTVKCAEDVL---NKPFAFEHSRG  100 (144)
Q Consensus        28 ~~~G~L~k~~~---~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~-~~~~i~L~~~~~v~~~~~~~---~~~~~f~I~~~  100 (144)
                      +.+|||.++|+   ..++|++|||+|+++.|+||+...    ... +.++|+|+.|..|..+++..   ..+++|.|.++
T Consensus         1 ~~~G~l~k~~g~~r~~K~WkrRwF~L~~~~L~y~K~~~----~~~~~~g~IdL~~~~sVk~~~~~~~~~~~~~~Fei~tp   76 (101)
T cd01264           1 LIEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKS----KDDPDDCSIDLSKIRSVKAVAKKRRDRSLPKAFEIFTA   76 (101)
T ss_pred             CcceEEeecCccceeeecceeEEEEEeCCEEEEEeccC----ccCCCCceEEcccceEEeeccccccccccCcEEEEEcC
Confidence            36899999988   789999999999999999999875    333 45999999999998776432   44799999999


Q ss_pred             CeEEEEEcCCHHHHHHHHHHHHHHH
Q 035610          101 GYTMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus       101 ~~~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      +++|+|+|+|++++++||++|+.|+
T Consensus        77 ~rt~~l~A~se~e~e~WI~~i~~a~  101 (101)
T cd01264          77 DKTYILKAKDEKNAEEWLQCLNIAV  101 (101)
T ss_pred             CceEEEEeCCHHHHHHHHHHHHhhC
Confidence            9999999999999999999999863

Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain

Probab=99.92  E-value=5.3e-24  Score=138.13  Aligned_cols=95  Identities=19%  Similarity=0.304  Sum_probs=79.2

Q ss_pred             eEEEEEeeCCC-CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEE---Eeec-c-c-cCCCCceEEEEeCC
Q 035610           29 AIGPANKQGDY-IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLT---VKCA-E-D-VLNKPFAFEHSRGG  101 (144)
Q Consensus        29 ~~G~L~k~~~~-~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~---v~~~-~-~-~~~~~~~f~I~~~~  101 (144)
                      ++|||.|+|+. .+.|++|||+|+++.|+||+++.    +..+.|.|+|+.+..   |... . + .....++|.|.+++
T Consensus         1 KeG~L~K~g~~~~k~wkkRwFvL~~~~L~Yyk~~~----d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~F~i~t~~   76 (103)
T cd01251           1 KEGFMEKTGPKHTEGFKKRWFTLDDRRLMYFKDPL----DAFAKGEVFLGSQEDGYEVREGLPPGTQGNHWYGVTLVTPE   76 (103)
T ss_pred             CceeEEecCCCCCCCceeEEEEEeCCEEEEECCCC----CcCcCcEEEeeccccceeEeccCCccccccccceEEEEeCC
Confidence            58999999986 68999999999999999999987    678999999986532   3221 1 1 12333599999999


Q ss_pred             eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610          102 YTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       102 ~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      ++|+|.|+|++|+++||++|+.++..
T Consensus        77 Rty~l~a~s~~e~~~Wi~ai~~v~~~  102 (103)
T cd01251          77 RKFLFACETEQDRREWIAAFQNVLSR  102 (103)
T ss_pred             eEEEEECCCHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999854

Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici

>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain

Probab=99.91  E-value=2.6e-23  Score=134.24  Aligned_cols=94  Identities=17%  Similarity=0.246  Sum_probs=81.6

Q ss_pred             CceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc---cCCCCceEEEEeCCeE
Q 035610           27 PGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED---VLNKPFAFEHSRGGYT  103 (144)
Q Consensus        27 ~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~---~~~~~~~f~I~~~~~~  103 (144)
                      ..++|||.|+|+..+.|++|||+|+++.|.||+++.    +..+.+.|+|..+.. ...++   ..+++++|.|.+++++
T Consensus         2 v~k~G~L~Kkg~~~k~WkkRwfvL~~~~L~yyk~~~----~~~~~~~I~L~~~~v-~~~~~~~~~~~~~~~F~I~t~~rt   76 (100)
T cd01233           2 VSKKGYLNFPEETNSGWTRRFVVVRRPYLHIYRSDK----DPVERGVINLSTARV-EHSEDQAAMVKGPNTFAVCTKHRG   76 (100)
T ss_pred             cceeEEEEeeCCCCCCcEEEEEEEECCEEEEEccCC----CccEeeEEEecccEE-EEccchhhhcCCCcEEEEECCCCE
Confidence            358999999999889999999999999999999987    788999999997543 33332   1347899999999999


Q ss_pred             EEEEcCCHHHHHHHHHHHHHHH
Q 035610          104 MYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus       104 ~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      |+|+|+|++|+++||.+|+..+
T Consensus        77 ~~~~A~s~~e~~~Wi~ai~~~~   98 (100)
T cd01233          77 YLFQALSDKEMIDWLYALNPLY   98 (100)
T ss_pred             EEEEcCCHHHHHHHHHHhhhhh
Confidence            9999999999999999998865

Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.

>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain

Probab=99.89  E-value=1.7e-22  Score=129.44  Aligned_cols=91  Identities=23%  Similarity=0.432  Sum_probs=78.0

Q ss_pred             ceEEEEEeeCCC----CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC-e
Q 035610           28 GAIGPANKQGDY----IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG-Y  102 (144)
Q Consensus        28 ~~~G~L~k~~~~----~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~-~  102 (144)
                      +++|||.|++..    .+.|++|||+|.++.|+||+++.    +..+.+.|+|.++... ...+ ..++++|.|.+++ +
T Consensus         1 ~~~GwL~kk~~~~g~~~k~WkkrwfvL~~~~L~yyk~~~----~~~~~~~I~L~~~~v~-~~~~-~~k~~~F~I~~~~~~   74 (96)
T cd01260           1 DCDGWLWKRKKPGGFMGQKWARRWFVLKGTTLYWYRSKQ----DEKAEGLIFLSGFTIE-SAKE-VKKKYAFKVCHPVYK   74 (96)
T ss_pred             CceeEEEEecCCCCccccCceeEEEEEECCEEEEECCCC----CCccceEEEccCCEEE-Echh-cCCceEEEECCCCCc
Confidence            368999999654    44999999999999999999997    7789999999997443 3333 3588999999888 9


Q ss_pred             EEEEEcCCHHHHHHHHHHHHHH
Q 035610          103 TMYSVADTEKEKGERINSIGRA  124 (144)
Q Consensus       103 ~~~l~a~s~~e~~~Wi~al~~a  124 (144)
                      +|+|+|+|.+++++||.+|+.|
T Consensus        75 ~~~f~a~s~~e~~~Wi~ai~~~   96 (96)
T cd01260          75 SFYFAAETLDDLSQWVNHLITA   96 (96)
T ss_pred             EEEEEeCCHHHHHHHHHHHHhC
Confidence            9999999999999999999874

Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet

>cd01238 PH_Tec Tec pleckstrin homology (PH) domain

Probab=99.89  E-value=1.7e-22  Score=131.71  Aligned_cols=94  Identities=15%  Similarity=0.217  Sum_probs=78.1

Q ss_pred             ceEEEEEeeCCCC-----CCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccC------CCCceEE
Q 035610           28 GAIGPANKQGDYI-----KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVL------NKPFAFE   96 (144)
Q Consensus        28 ~~~G~L~k~~~~~-----~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~------~~~~~f~   96 (144)
                      +++|+|.|++...     ++|++|||||+++.|+||+++.+  ....++|.|+|..+..+....+..      ...++|+
T Consensus         1 ~k~g~l~Kr~~~~~~~~~~nwKkRwFvL~~~~L~Yyk~~~~--~~~~~kG~I~L~~~~~ve~~~~~~~~~~~~~~~~~F~   78 (106)
T cd01238           1 ILESILVKRSQQKKKTSPLNYKERLFVLTKSKLSYYEGDFE--KRGSKKGSIDLSKIKCVETVKPEKNPPIPERFKYPFQ   78 (106)
T ss_pred             CcceeeeeeccCCCCCCCCCceeEEEEEcCCEEEEECCCcc--cccCcceeEECCcceEEEEecCCcCcccccccCccEE
Confidence            4799999996432     39999999999999999998761  124799999999987776554322      3578999


Q ss_pred             EEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 035610           97 HSRGGYTMYSVADTEKEKGERINSIGR  123 (144)
Q Consensus        97 I~~~~~~~~l~a~s~~e~~~Wi~al~~  123 (144)
                      |.+++++||+.|+|++|+++||++|++
T Consensus        79 i~t~~r~~yl~A~s~~er~~WI~ai~~  105 (106)
T cd01238          79 VVHDEGTLYVFAPTEELRKRWIKALKQ  105 (106)
T ss_pred             EEeCCCeEEEEcCCHHHHHHHHHHHHh
Confidence            999999999999999999999999986

Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis

>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain

Probab=99.89  E-value=1.8e-22  Score=129.12  Aligned_cols=89  Identities=17%  Similarity=0.247  Sum_probs=76.3

Q ss_pred             eEEEEEeeCC--CCCCceeEEEEEeC--CeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEE
Q 035610           29 AIGPANKQGD--YIKTWLRRWFILKQ--GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTM  104 (144)
Q Consensus        29 ~~G~L~k~~~--~~~~w~~R~fvL~~--~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~  104 (144)
                      .+|||+|+|+  ..+.|++|||||.+  ..|+||+++.    +..|+|.|+|.++..+...+   ..++.|.|.++++.|
T Consensus         1 l~GyL~K~g~~~~~K~WkkRWFvL~~~~~~L~Yyk~~~----d~~p~G~I~L~~~~~~~~~~---~~~~~F~i~t~~r~y   73 (95)
T cd01265           1 LCGYLHKIEGKGPLRGRRSRWFALDDRTCYLYYYKDSQ----DAKPLGRVDLSGAAFTYDPR---EEKGRFEIHSNNEVI   73 (95)
T ss_pred             CcccEEEecCCCCCcCceeEEEEEcCCCcEEEEECCCC----cccccceEECCccEEEcCCC---CCCCEEEEEcCCcEE
Confidence            3699999986  36899999999985  4799999987    78899999999965543332   246899999999999


Q ss_pred             EEEcCCHHHHHHHHHHHHHH
Q 035610          105 YSVADTEKEKGERINSIGRA  124 (144)
Q Consensus       105 ~l~a~s~~e~~~Wi~al~~a  124 (144)
                      +|.|+|++|+++||++|+.+
T Consensus        74 ~l~A~s~~e~~~Wi~al~~~   93 (95)
T cd01265          74 ALKASSDKQMNYWLQALQSK   93 (95)
T ss_pred             EEECCCHHHHHHHHHHHHhh
Confidence            99999999999999999985

PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain

Probab=99.89  E-value=4.2e-22  Score=126.42  Aligned_cols=89  Identities=22%  Similarity=0.352  Sum_probs=75.2

Q ss_pred             eEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC-eEEEEE
Q 035610           29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG-YTMYSV  107 (144)
Q Consensus        29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~-~~~~l~  107 (144)
                      .+|||.|++...+.|++|||||+++.|.||+++.+.  ...++|.|+|..|..+..  +  ..++.|.|.+.+ ++|+|.
T Consensus         1 ~~G~L~K~~~~~k~Wk~RwFvL~~g~L~Yyk~~~~~--~~~~~G~I~L~~~~i~~~--~--~~~~~F~i~~~~~r~~~L~   74 (91)
T cd01247           1 TNGVLSKWTNYINGWQDRYFVLKEGNLSYYKSEAEK--SHGCRGSIFLKKAIIAAH--E--FDENRFDISVNENVVWYLR   74 (91)
T ss_pred             CceEEEEeccccCCCceEEEEEECCEEEEEecCccC--cCCCcEEEECcccEEEcC--C--CCCCEEEEEeCCCeEEEEE
Confidence            379999999999999999999999999999998611  235799999999755432  2  346899997655 999999


Q ss_pred             cCCHHHHHHHHHHHHH
Q 035610          108 ADTEKEKGERINSIGR  123 (144)
Q Consensus       108 a~s~~e~~~Wi~al~~  123 (144)
                      |+|++|+++||++|++
T Consensus        75 A~s~~e~~~Wi~al~~   90 (91)
T cd01247          75 AENSQSRLLWMDSVVR   90 (91)
T ss_pred             eCCHHHHHHHHHHHhh
Confidence            9999999999999986

Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt

>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain

Probab=99.88  E-value=6.3e-22  Score=128.00  Aligned_cols=92  Identities=26%  Similarity=0.305  Sum_probs=76.8

Q ss_pred             eEEEEEeeCC---------CCCCceeEEEEEeC-CeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEE
Q 035610           29 AIGPANKQGD---------YIKTWLRRWFILKQ-GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHS   98 (144)
Q Consensus        29 ~~G~L~k~~~---------~~~~w~~R~fvL~~-~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~   98 (144)
                      ++|||.|.++         ..+.|++|||||++ +.|+||+++.   .+..++|.|+|+.|..|..+++..+.+++|.|.
T Consensus         1 ~~g~l~~~~~~~~~~~~~~~~K~WkrRWFvL~~~~~L~y~~d~~---~~~~p~G~IdL~~~~~V~~~~~~~~~~~~f~I~   77 (104)
T cd01236           1 YCGWLLVAPDGTDFDNPVHRSKRWQRRWFILYDHGLLTYALDEM---PTTLPQGTIDMNQCTDVVDAEARTGQKFSICIL   77 (104)
T ss_pred             CcceeEEcCCCCcccccceeeccccceEEEEeCCCEEEEeeCCC---CCcccceEEEccceEEEeecccccCCccEEEEE
Confidence            4799999853         35799999999985 6677776552   146789999999999888776655667999999


Q ss_pred             eCCeEEEEEcCCHHHHHHHHHHHHH
Q 035610           99 RGGYTMYSVADTEKEKGERINSIGR  123 (144)
Q Consensus        99 ~~~~~~~l~a~s~~e~~~Wi~al~~  123 (144)
                      +++++|+|.|+|++|+++||++|..
T Consensus        78 tp~R~f~l~Aete~E~~~Wi~~l~~  102 (104)
T cd01236          78 TPDKEHFIKAETKEEISWWLNMLMV  102 (104)
T ss_pred             CCCceEEEEeCCHHHHHHHHHHHHh
Confidence            9999999999999999999999864

Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain

Probab=99.88  E-value=1.1e-21  Score=126.60  Aligned_cols=93  Identities=22%  Similarity=0.346  Sum_probs=79.1

Q ss_pred             eEEEEEeeCCCCCCceeEEEEEeC--CeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc------CCCCceEEEEeC
Q 035610           29 AIGPANKQGDYIKTWLRRWFILKQ--GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV------LNKPFAFEHSRG  100 (144)
Q Consensus        29 ~~G~L~k~~~~~~~w~~R~fvL~~--~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~------~~~~~~f~I~~~  100 (144)
                      .+|||.|+|+..+.|++|||+|.+  +.|.||+++.    +..+.|.|+|..+..+....+.      ....+.|.|.++
T Consensus         1 ~~G~L~K~g~~~k~WkkRwFvL~~~~~~L~Yy~~~~----~~~~~g~I~L~~~~~v~~~~~~~~~~~~~~~~~~f~i~t~   76 (101)
T cd01235           1 CEGYLYKRGALLKGWKPRWFVLDPDKHQLRYYDDFE----DTAEKGCIDLAEVKSVNLAQPGMGAPKHTSRKGFFDLKTS   76 (101)
T ss_pred             CeEEEEEcCCCCCCccceEEEEECCCCEEEEecCCC----CCccceEEEcceeEEEeecCCCCCCCCCCCCceEEEEEeC
Confidence            379999999999999999999994  4899999987    7889999999997776543221      124467999999


Q ss_pred             CeEEEEEcCCHHHHHHHHHHHHHHH
Q 035610          101 GYTMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus       101 ~~~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      .+.|+|.|++.+++.+||++|+++|
T Consensus        77 ~r~~~~~a~s~~e~~~Wi~ai~~~i  101 (101)
T cd01235          77 KRTYNFLAENINEAQRWKEKIQQCI  101 (101)
T ss_pred             CceEEEECCCHHHHHHHHHHHHhhC
Confidence            9999999999999999999999864

Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .

>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain

Probab=99.88  E-value=1.4e-21  Score=125.93  Aligned_cols=92  Identities=18%  Similarity=0.345  Sum_probs=78.3

Q ss_pred             CceEEEEEeeCCCCCCceeEEEEEeCC------eEEEEecCCCCCC-CCCcceEEeCCceEEEeeccccCCCCceEEEEe
Q 035610           27 PGAIGPANKQGDYIKTWLRRWFILKQG------EHFWFKDSHNITR-GSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSR   99 (144)
Q Consensus        27 ~~~~G~L~k~~~~~~~w~~R~fvL~~~------~l~y~k~~~~~~~-~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~   99 (144)
                      ..++|||.|+    ++|++|||||+++      .|.||+++.+... ...|+++|+|..|..|....+ ..++++|.|.+
T Consensus         2 v~k~GyL~K~----K~~kkRwFVLr~~~~~~p~~Leyyk~ek~~~~~~~~p~~vI~L~~c~~v~~~~d-~k~~~~f~i~t   76 (101)
T cd01257           2 VRKSGYLRKQ----KSMHKRFFVLRAESSGGPARLEYYENEKKFLQKGSAPKRVIPLESCFNINKRAD-AKHRHLIALYT   76 (101)
T ss_pred             ccEEEEEeEe----cCcEeEEEEEecCCCCCCceEEEECChhhccccCCCceEEEEccceEEEeeccc-cccCeEEEEEe
Confidence            5689999998    7999999999987      7999999862111 267999999999998876555 34569999999


Q ss_pred             CCeEEEEEcCCHHHHHHHHHHHHH
Q 035610          100 GGYTMYSVADTEKEKGERINSIGR  123 (144)
Q Consensus       100 ~~~~~~l~a~s~~e~~~Wi~al~~  123 (144)
                      ++++|+|.|+|++|+++|+.+|..
T Consensus        77 ~dr~f~l~aese~E~~~Wi~~i~~  100 (101)
T cd01257          77 RDEYFAVAAENEAEQDSWYQALLE  100 (101)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHhh
Confidence            999999999999999999999864

Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.

>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain

Probab=99.87  E-value=4e-21  Score=128.67  Aligned_cols=94  Identities=35%  Similarity=0.560  Sum_probs=80.1

Q ss_pred             ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC------
Q 035610           28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG------  101 (144)
Q Consensus        28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~------  101 (144)
                      +++|||.|+++..+.|++|||+|.++.|+||+++.    +..+.+.|+|+++. |...++ ..++++|.|..++      
T Consensus         1 ~k~G~L~K~~~~~~~WkkRwfvL~~~~L~yyk~~~----~~~~~g~I~L~~~~-v~~~~~-~~~~~~F~i~~~~~~~~i~   74 (125)
T cd01252           1 DREGWLLKQGGRVKTWKRRWFILTDNCLYYFEYTT----DKEPRGIIPLENVS-IREVED-PSKPFCFELFSPSDKQQIK   74 (125)
T ss_pred             CcEEEEEEeCCCCCCeEeEEEEEECCEEEEEcCCC----CCCceEEEECCCcE-EEEccc-CCCCeeEEEECCccccccc
Confidence            47899999998899999999999999999999987    77899999999854 433333 3577999988644      


Q ss_pred             ---------------eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610          102 ---------------YTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       102 ---------------~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                                     +.|+|+|+|.+|+++||++|+.++..
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~~  115 (125)
T cd01252          75 ACKTESDGRVVEGNHSVYRISAANDEEMDEWIKSIKASISP  115 (125)
T ss_pred             cccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhc
Confidence                           47789999999999999999998854

Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain

Probab=99.85  E-value=1.3e-20  Score=123.27  Aligned_cols=90  Identities=23%  Similarity=0.322  Sum_probs=75.0

Q ss_pred             EEEEEeeCC----CCCCceeEEEEEeCCe-------EEEEecCCCCCCCCCcceEEeCCceEEEeecc----ccCCCCce
Q 035610           30 IGPANKQGD----YIKTWLRRWFILKQGE-------HFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE----DVLNKPFA   94 (144)
Q Consensus        30 ~G~L~k~~~----~~~~w~~R~fvL~~~~-------l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~----~~~~~~~~   94 (144)
                      +|||.|+++    ..+.|++|||+|.++.       |.||+++.    +..+.|.|+|..+..+....    ......+.
T Consensus         2 eGwL~K~~~~~~~~~~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~----~~k~~g~I~L~~~~~v~~~~~~~~~~~~~~~~   77 (108)
T cd01266           2 EGWLKKSPPYKLLFRTKWVRRYFVLHCGDRERNLFALEYYKTSR----KFKLEFVIDLESCSQVDPGLLCTAGNCIFGYG   77 (108)
T ss_pred             ceeeeeCCccccccccCcEEEEEEEeccccCCCcceEEEECCCC----CCccceEEECCccEEEcccccccccCcccceE
Confidence            799999987    3459999999999876       59999987    78999999999976664321    11233467


Q ss_pred             EEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 035610           95 FEHSRGGYTMYSVADTEKEKGERINSIGR  123 (144)
Q Consensus        95 f~I~~~~~~~~l~a~s~~e~~~Wi~al~~  123 (144)
                      |.|.++.++|+|.|+|++|+++||.+|++
T Consensus        78 f~i~t~~r~y~l~A~s~ee~~~Wi~~I~~  106 (108)
T cd01266          78 FDIETIVRDLYLVAKNEEEMTLWVNCICK  106 (108)
T ss_pred             EEEEeCCccEEEEECCHHHHHHHHHHHHh
Confidence            99999999999999999999999999976

Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str

>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain

Probab=99.84  E-value=1.3e-20  Score=120.42  Aligned_cols=89  Identities=19%  Similarity=0.332  Sum_probs=77.6

Q ss_pred             eEEEEEeeCCC-CCCceeEEEEEeC----CeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-cCCCCceEEEEeCCe
Q 035610           29 AIGPANKQGDY-IKTWLRRWFILKQ----GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-VLNKPFAFEHSRGGY  102 (144)
Q Consensus        29 ~~G~L~k~~~~-~~~w~~R~fvL~~----~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-~~~~~~~f~I~~~~~  102 (144)
                      +.|||.|+|+. .+.|++|||+|.+    ++|+||++..    +..|.+.|+|..+ .|.+.++ ..+++|||+|.++++
T Consensus         1 ~~G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~----~~~p~gli~l~~~-~V~~v~ds~~~r~~cFel~~~~~   75 (98)
T cd01245           1 KKGNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPK----KTKPIGLIDLSDA-YLYPVHDSLFGRPNCFQIVERAL   75 (98)
T ss_pred             CCCccccCCCCcccccceeEEEEecCCCCceEEEEcCCC----CCCccceeecccc-EEEEccccccCCCeEEEEecCCC
Confidence            36999999987 8999999999986    8999999988    7889999999996 7666655 357899999998875


Q ss_pred             --EEEEEcCCHHHHHHHHHHHHH
Q 035610          103 --TMYSVADTEKEKGERINSIGR  123 (144)
Q Consensus       103 --~~~l~a~s~~e~~~Wi~al~~  123 (144)
                        .|+++|++ +|+++||++|++
T Consensus        76 ~~~y~~~a~~-~er~~Wi~~l~~   97 (98)
T cd01245          76 PTVYYSCRSS-EERDKWIESLQA   97 (98)
T ss_pred             CeEEEEeCCH-HHHHHHHHHHhc
Confidence              78888888 999999999986

RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain

Probab=99.84  E-value=9.3e-20  Score=115.00  Aligned_cols=88  Identities=27%  Similarity=0.503  Sum_probs=76.2

Q ss_pred             eEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCC--CcceEEeCCceEEEeeccccCCCCceEEEEeCC-eEEE
Q 035610           29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGS--TPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG-YTMY  105 (144)
Q Consensus        29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~--~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~-~~~~  105 (144)
                      ++|||.|+++..+.|++|||+|.++.|.||+++.    +.  .+.+.|+|..+... . ++  ..+++|.|.+++ +.++
T Consensus         1 ~~G~L~k~~~~~~~W~~r~~vl~~~~L~~~~~~~----~~~~~~~~~i~l~~~~~~-~-~~--~~~~~F~i~~~~~~~~~   72 (91)
T cd01246           1 VEGWLLKWTNYLKGWQKRWFVLDNGLLSYYKNKS----SMRGKPRGTILLSGAVIS-E-DD--SDDKCFTIDTGGDKTLH   72 (91)
T ss_pred             CeEEEEEecccCCCceeeEEEEECCEEEEEecCc----cCCCCceEEEEeceEEEE-E-CC--CCCcEEEEEcCCCCEEE
Confidence            4899999988889999999999999999999987    55  78999999996533 2 22  347999999887 8999


Q ss_pred             EEcCCHHHHHHHHHHHHHH
Q 035610          106 SVADTEKEKGERINSIGRA  124 (144)
Q Consensus       106 l~a~s~~e~~~Wi~al~~a  124 (144)
                      |+|+|.+|+++||.+|+.|
T Consensus        73 ~~a~s~~e~~~Wi~al~~a   91 (91)
T cd01246          73 LRANSEEERQRWVDALELA   91 (91)
T ss_pred             EECCCHHHHHHHHHHHHhC
Confidence            9999999999999999864

Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.84  E-value=3.1e-20  Score=136.39  Aligned_cols=101  Identities=36%  Similarity=0.536  Sum_probs=87.8

Q ss_pred             ceeecCCceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEe
Q 035610           21 IEFWSQPGAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSR   99 (144)
Q Consensus        21 ~~~~~~~~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~   99 (144)
                      .+.+.+|.++|||.|+|+ +.++|++|||+|.+++|+||....    +..|+|.|+|.+ .+++..++ ..+|+||.|+.
T Consensus       254 thtffnpdREGWLlKlgg~rvktWKrRWFiLtdNCLYYFe~tT----DKEPrGIIpLeN-lsir~Ved-P~kP~cfEly~  327 (395)
T KOG0930|consen  254 THTFFNPDREGWLLKLGGNRVKTWKRRWFILTDNCLYYFEYTT----DKEPRGIIPLEN-LSIREVED-PKKPNCFELYI  327 (395)
T ss_pred             hhhccCccccceeeeecCCcccchhheeEEeecceeeeeeecc----CCCCCcceeccc-cceeeccC-CCCCCeEEEec
Confidence            455889999999999976 789999999999999999999888    899999999999 66666665 47999999985


Q ss_pred             CC----------------------eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610          100 GG----------------------YTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       100 ~~----------------------~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      ++                      ..|.++|.+.+++.+||.+|+.++..
T Consensus       328 ps~~gq~IKACKTe~DGRvVEG~H~vYrIsA~~~Ee~~~Wi~sI~a~is~  377 (395)
T KOG0930|consen  328 PSNKGQVIKACKTEADGRVVEGNHSVYRISAPTPEEKDEWIKSIKAAISR  377 (395)
T ss_pred             CCCCcCeeeeecccCCceeEeccceEEEeeCCCHHHHHHHHHHHHHHhcc
Confidence            43                      35778999999999999999998863

>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain

Probab=99.82  E-value=2.1e-19  Score=114.03  Aligned_cols=92  Identities=24%  Similarity=0.385  Sum_probs=75.4

Q ss_pred             eEEEEEeeCCC-CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEE
Q 035610           29 AIGPANKQGDY-IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSV  107 (144)
Q Consensus        29 ~~G~L~k~~~~-~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~  107 (144)
                      ++|||.|+++. .+.|++|||+|.++.|.||+++.+.  ...+.+.|+|..+.. ....+...++++|.|.++++.|+|+
T Consensus         1 k~G~L~kk~~~~~~~W~kr~~~L~~~~l~~y~~~~~~--~~~~~~~i~l~~~~v-~~~~~~~~~~~~f~i~~~~~~~~f~   77 (94)
T cd01250           1 KQGYLYKRSSKSNKEWKKRWFVLKNGQLTYHHRLKDY--DNAHVKEIDLRRCTV-RHNGKQPDRRFCFEVISPTKTWHFQ   77 (94)
T ss_pred             CcceEEEECCCcCCCceEEEEEEeCCeEEEEcCCccc--ccccceEEeccceEE-ecCccccCCceEEEEEcCCcEEEEE
Confidence            58999999765 7899999999999999999987611  156778999988543 3333322378999999999999999


Q ss_pred             cCCHHHHHHHHHHHHH
Q 035610          108 ADTEKEKGERINSIGR  123 (144)
Q Consensus       108 a~s~~e~~~Wi~al~~  123 (144)
                      |+|.+++++|+.+|+.
T Consensus        78 a~s~~~~~~Wi~al~~   93 (94)
T cd01250          78 ADSEEERDDWISAIQE   93 (94)
T ss_pred             CCCHHHHHHHHHHHhc
Confidence            9999999999999986

Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain

Probab=99.82  E-value=3.9e-19  Score=113.93  Aligned_cols=79  Identities=15%  Similarity=0.186  Sum_probs=70.4

Q ss_pred             CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-cCCCCceEEEEeCCeEEEEEcCCHHHHHHHH
Q 035610           40 IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-VLNKPFAFEHSRGGYTMYSVADTEKEKGERI  118 (144)
Q Consensus        40 ~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-~~~~~~~f~I~~~~~~~~l~a~s~~e~~~Wi  118 (144)
                      ...|++|||+|+++.|+||+++.     ..+.|+|+|+.+..|....+ ..+.+++|+|.+++++||+.|+|+.|+++||
T Consensus        18 ~~n~KkRwF~Lt~~~L~Y~k~~~-----~~~~g~I~L~~i~~ve~v~~~~~~~~~~fqivt~~r~~yi~a~s~~E~~~Wi   92 (98)
T cd01244          18 VLHFKKRYFQLTTTHLSWAKDVQ-----CKKSALIKLAAIKGTEPLSDKSFVNVDIITIVCEDDTMQLQFEAPVEATDWL   92 (98)
T ss_pred             CcCCceeEEEECCCEEEEECCCC-----CceeeeEEccceEEEEEcCCcccCCCceEEEEeCCCeEEEECCCHHHHHHHH
Confidence            46999999999999999999774     68999999999888876654 3456799999999999999999999999999


Q ss_pred             HHHHH
Q 035610          119 NSIGR  123 (144)
Q Consensus       119 ~al~~  123 (144)
                      ++|++
T Consensus        93 ~al~k   97 (98)
T cd01244          93 NALEK   97 (98)
T ss_pred             HHHhc
Confidence            99986

RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01241 PH_Akt Akt pleckstrin homology (PH) domain

Probab=99.80  E-value=1.9e-18  Score=111.86  Aligned_cols=89  Identities=25%  Similarity=0.342  Sum_probs=67.3

Q ss_pred             ceEEEEEeeCCCCCCceeEEEEEe-CCeEEEEecCCCCCCCCCcceEEeCCceEE----EeeccccCCCCceEEEEe---
Q 035610           28 GAIGPANKQGDYIKTWLRRWFILK-QGEHFWFKDSHNITRGSTPRGFIPVGTCLT----VKCAEDVLNKPFAFEHSR---   99 (144)
Q Consensus        28 ~~~G~L~k~~~~~~~w~~R~fvL~-~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~----v~~~~~~~~~~~~f~I~~---   99 (144)
                      +++|||.|+|+..+.|++|||+|+ ++.|.||+++.    .....+.++|.+...    +...+  ..++++|.|..   
T Consensus         2 ~k~G~L~K~g~~~~~Wk~R~f~L~~~~~l~~yk~~~----~~~~~~~i~l~~~~v~~~~~~~~~--~~~~~~F~i~~~~~   75 (102)
T cd01241           2 VKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKEKP----EDGDPFLPPLNNFSVAECQLMKTE--RPRPNTFIIRCLQW   75 (102)
T ss_pred             cEEEEEEeecCCCCCCeeEEEEEeCCCeEEEEecCC----CccCccccccCCeEEeeeeeeecc--CCCcceEEEEeccC
Confidence            589999999999999999999999 78899888865    333446777776432    21122  25668999972   


Q ss_pred             ---CCeEEEEEcCCHHHHHHHHHHHHHH
Q 035610          100 ---GGYTMYSVADTEKEKGERINSIGRA  124 (144)
Q Consensus       100 ---~~~~~~l~a~s~~e~~~Wi~al~~a  124 (144)
                         .++  .|+|+|.+|+++||++|+.+
T Consensus        76 ~~~~~r--~f~a~s~ee~~eWi~ai~~v  101 (102)
T cd01241          76 TTVIER--TFHVESPEEREEWIHAIQTV  101 (102)
T ss_pred             CcccCE--EEEeCCHHHHHHHHHHHHhh
Confidence               234  44689999999999999875

Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]

Probab=99.79  E-value=6.4e-18  Score=107.86  Aligned_cols=96  Identities=27%  Similarity=0.433  Sum_probs=82.2

Q ss_pred             ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc-----CCCCceEEEEeCCe
Q 035610           28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV-----LNKPFAFEHSRGGY  102 (144)
Q Consensus        28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~-----~~~~~~f~I~~~~~  102 (144)
                      .++|||.+++...+.|++|||+|.++.|.||+++. ......+.+.|+|.++ .+....+.     ...+++|.|..+++
T Consensus         2 ~~~G~L~~~~~~~~~wk~r~~vL~~~~L~~~~~~~-~~~~~~~~~~i~l~~~-~v~~~~~~~~~~~~~~~~~f~i~~~~~   79 (104)
T PF00169_consen    2 IKEGWLLKKSSSRKKWKKRYFVLRDSYLLYYKSSK-DKSDSKPKGSIPLDDC-TVRPDPSSDFLSNKKRKNCFEITTPNG   79 (104)
T ss_dssp             EEEEEEEEEESSSSSEEEEEEEEETTEEEEESSTT-TTTESSESEEEEGTTE-EEEEETSSTSTSTSSSSSEEEEEETTS
T ss_pred             EEEEEEEEECCCCCCeEEEEEEEECCEEEEEecCc-cccceeeeEEEEecCc-eEEEcCccccccccCCCcEEEEEeCCC
Confidence            58999999998889999999999999999999985 2234689999999997 44444332     46789999998876


Q ss_pred             -EEEEEcCCHHHHHHHHHHHHHHH
Q 035610          103 -TMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus       103 -~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                       .++|.|+|.+++..|+.+|+.++
T Consensus        80 ~~~~~~~~s~~~~~~W~~~i~~~~  103 (104)
T PF00169_consen   80 KSYLFSAESEEERKRWIQAIQKAI  103 (104)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             cEEEEEcCCHHHHHHHHHHHHHHh
Confidence             99999999999999999999986

The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....

>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain

Probab=99.75  E-value=2.1e-17  Score=109.63  Aligned_cols=96  Identities=23%  Similarity=0.378  Sum_probs=75.0

Q ss_pred             ceEEEEEe-e-CCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeec---cccCCCCceEEEEeC--
Q 035610           28 GAIGPANK-Q-GDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA---EDVLNKPFAFEHSRG--  100 (144)
Q Consensus        28 ~~~G~L~k-~-~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~---~~~~~~~~~f~I~~~--  100 (144)
                      ...|||.. + .++.++|++|||+|+++.|.||+.+. ......|.+.|+|.+|......   .+...++|+|.|...  
T Consensus         2 ~~~GfL~~~q~~~~~k~W~RRWFvL~g~~L~y~k~p~-d~~~~~Plg~I~L~~c~~~~v~~~~r~~c~Rp~tF~i~~~~~   80 (122)
T cd01263           2 EYHGFLTMFEDTSGFGAWHRRWCALEGGEIKYWKYPD-DEKRKGPTGLIDLSTCTSSEGASAVRDICARPNTFHLDVWRP   80 (122)
T ss_pred             ccceeEEEEeccCCCCCceEEEEEEeCCEEEEEcCCC-ccccCCceEEEEhhhCcccccccCChhhcCCCCeEEEEEecc
Confidence            35799986 3 45789999999999999999999776 2334789999999998775432   234689999999631  


Q ss_pred             C-----------------e-EEEEEcCCHHHHHHHHHHHHHH
Q 035610          101 G-----------------Y-TMYSVADTEKEKGERINSIGRA  124 (144)
Q Consensus       101 ~-----------------~-~~~l~a~s~~e~~~Wi~al~~a  124 (144)
                      .                 + .++|+|+|.+|+++|+.+|+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~r~~~~lsaDt~eer~~W~~ain~~  122 (122)
T cd01263          81 KMETDDETLVSQCRRGIERLRVMLSADTKEERQTWLSLLNST  122 (122)
T ss_pred             cccccccceeeccCCceeEEEEEEecCCHHHHHHHHHHHhcC
Confidence            1                 2 2568899999999999999863

Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain

Probab=99.75  E-value=6.1e-17  Score=104.60  Aligned_cols=97  Identities=20%  Similarity=0.117  Sum_probs=79.7

Q ss_pred             ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCC-CCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEE
Q 035610           28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHN-ITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYS  106 (144)
Q Consensus        28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~-~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l  106 (144)
                      +++|+|.|.+...+.|+.|||+|.++.|.|+++... .......++.|+|+++ .|...++ ...+|+|.|.+..++|.+
T Consensus         3 ikeG~L~K~~~~~~~~k~RyffLFnd~Ll~~~~~~~~~~~~y~~~~~i~l~~~-~v~~~~~-~~~~~~F~I~~~~rsf~l   80 (101)
T cd01219           3 LKEGSVLKISSTTEKTEERYLFLFNDLLLYCVPRKMIGGSKFKVRARIDVSGM-QVCEGDN-LERPHSFLVSGKQRCLEL   80 (101)
T ss_pred             ccceEEEEEecCCCCceeEEEEEeCCEEEEEEcccccCCCcEEEEEEEecccE-EEEeCCC-CCcCceEEEecCCcEEEE
Confidence            589999999988899999999999999999986421 1123456788999994 4443332 467899999999999999


Q ss_pred             EcCCHHHHHHHHHHHHHHHH
Q 035610          107 VADTEKEKGERINSIGRAIV  126 (144)
Q Consensus       107 ~a~s~~e~~~Wi~al~~ai~  126 (144)
                      +|+|++|+++||++|+.++.
T Consensus        81 ~A~s~eEk~~W~~ai~~~i~  100 (101)
T cd01219          81 QARTQKEKNDWVQAIFSIID  100 (101)
T ss_pred             EcCCHHHHHHHHHHHHHHhh
Confidence            99999999999999999885

FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>PF15409 PH_8: Pleckstrin homology domain

Probab=99.70  E-value=4.1e-16  Score=97.61  Aligned_cols=85  Identities=18%  Similarity=0.361  Sum_probs=71.9

Q ss_pred             EEEEee-CCCCCCceeEEEEE--eCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEE
Q 035610           31 GPANKQ-GDYIKTWLRRWFIL--KQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSV  107 (144)
Q Consensus        31 G~L~k~-~~~~~~w~~R~fvL--~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~  107 (144)
                      |||.|+ ....+.|++|||+|  ..+.|.||+++.    +...+|+|+|..+ .+...    .+...|.|.+....|+|.
T Consensus         1 G~llKkrr~~lqG~~kRyFvL~~~~G~LsYy~~~~----~~~~rGsi~v~~a-~is~~----~~~~~I~idsg~~i~hLK   71 (89)
T PF15409_consen    1 GWLLKKRRKPLQGWHKRYFVLDFEKGTLSYYRNQN----SGKLRGSIDVSLA-VISAN----KKSRRIDIDSGDEIWHLK   71 (89)
T ss_pred             CcceeeccccCCCceeEEEEEEcCCcEEEEEecCC----CCeeEeEEEccce-EEEec----CCCCEEEEEcCCeEEEEE
Confidence            788887 56788999999999  889999999887    5688999999995 33222    234679999999999999


Q ss_pred             cCCHHHHHHHHHHHHHH
Q 035610          108 ADTEKEKGERINSIGRA  124 (144)
Q Consensus       108 a~s~~e~~~Wi~al~~a  124 (144)
                      |.|+++.+.|+.+|+.|
T Consensus        72 a~s~~~f~~Wv~aL~~a   88 (89)
T PF15409_consen   72 AKSQEDFQRWVSALQKA   88 (89)
T ss_pred             cCCHHHHHHHHHHHHhc
Confidence            99999999999999975

>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain

Probab=99.69  E-value=3.7e-16  Score=104.06  Aligned_cols=92  Identities=15%  Similarity=0.214  Sum_probs=76.3

Q ss_pred             eEEEEEeeCCC-----C-------------CCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc--
Q 035610           29 AIGPANKQGDY-----I-------------KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV--   88 (144)
Q Consensus        29 ~~G~L~k~~~~-----~-------------~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~--   88 (144)
                      ++|||.|++++     .             ..|++|||+|+++.|.||+++.    +..++++|.++....|......  
T Consensus         1 keG~i~kr~g~~~~~~~~~~~~~~~~~~~~~~w~kRWFvlr~s~L~Y~~~~~----~~~~~~vil~D~~f~v~~~~~~~~   76 (121)
T cd01254           1 KEGYIMKRSGGKRSGSDDCSFGCCCFCRMCDRWQKRWFIVKESFLAYMDDPS----SAQILDVILFDVDFKVNGGGKEDI   76 (121)
T ss_pred             CCceEEeCCCCCcCCcccccccccCCcccccCCcceeEEEeCCEEEEEcCCC----CCceeeEEEEcCCccEEeCCcccc
Confidence            57999888532     1             1699999999999999999987    6789999999877666543321  


Q ss_pred             ---------CCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 035610           89 ---------LNKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRA  124 (144)
Q Consensus        89 ---------~~~~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~a  124 (144)
                               ....++|.|.+++|+|.|.|+|+.++.+|+++|+.|
T Consensus        77 ~~~~~~~~~~~~~~~~~i~t~~R~~~l~a~s~~~~~~Wi~~i~~a  121 (121)
T cd01254          77 SLAVELKDITGLRHGLKITNSNRSLKLKCKSSRKLKQWMASIEDA  121 (121)
T ss_pred             cccccccccCCCceEEEEEcCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence                     356699999999999999999999999999999864

Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain

Probab=99.66  E-value=4.8e-15  Score=95.27  Aligned_cols=96  Identities=19%  Similarity=0.170  Sum_probs=73.0

Q ss_pred             ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEE
Q 035610           28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSV  107 (144)
Q Consensus        28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~  107 (144)
                      +++|+|.|.++.  .-+.|+|+|-++.|.|+...........+++.++|.++ .|...++..+.+|+|+|.++.+.|.++
T Consensus         3 ikEG~L~K~~~k--~~~~R~~FLFnD~LlY~~~~~~~~~~y~~~~~i~L~~~-~V~~~~~~~~~~~~F~I~~~~ks~~l~   79 (99)
T cd01220           3 IRQGCLLKLSKK--GLQQRMFFLFSDLLLYTSKSPTDQNSFRILGHLPLRGM-LTEESEHEWGVPHCFTIFGGQCAITVA   79 (99)
T ss_pred             eeEEEEEEEeCC--CCceEEEEEccceEEEEEeecCCCceEEEEEEEEcCce-EEeeccCCcCCceeEEEEcCCeEEEEE
Confidence            589999998753  24556777777777776643201112357899999995 565555544678999999999999999


Q ss_pred             cCCHHHHHHHHHHHHHHHH
Q 035610          108 ADTEKEKGERINSIGRAIV  126 (144)
Q Consensus       108 a~s~~e~~~Wi~al~~ai~  126 (144)
                      |.|++|+++||.+|++||.
T Consensus        80 A~s~~Ek~~Wi~~i~~aI~   98 (99)
T cd01220          80 ASTRAEKEKWLADLSKAIA   98 (99)
T ss_pred             CCCHHHHHHHHHHHHHHhh
Confidence            9999999999999999984

Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C

Probab=99.66  E-value=1.8e-15  Score=99.39  Aligned_cols=96  Identities=20%  Similarity=0.226  Sum_probs=57.0

Q ss_pred             eEEEEEeeCCC-CCCceeEEEEEe-CCeEEEEecCCCC---------CCCCCcceEEeCC----ceEEEeec-cccCCCC
Q 035610           29 AIGPANKQGDY-IKTWLRRWFILK-QGEHFWFKDSHNI---------TRGSTPRGFIPVG----TCLTVKCA-EDVLNKP   92 (144)
Q Consensus        29 ~~G~L~k~~~~-~~~w~~R~fvL~-~~~l~y~k~~~~~---------~~~~~~~~~i~L~----~~~~v~~~-~~~~~~~   92 (144)
                      ++|||.|.+.. .+.|++|||+|. ++.|.||+.+...         .......+.+...    ....+... .......
T Consensus         1 k~G~l~K~~~~~~kgWk~RwFiL~k~~~L~YyK~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (112)
T PF15413_consen    1 KEGYLYKWGNKFGKGWKKRWFILRKDGVLSYYKIPRDKKDVRIIGEESSRVIRKGDWSISRRSSRIQGIKDKNPFGEIHL   80 (112)
T ss_dssp             EEEEEEE--TTS-S--EEEEEEEE-TTEEEEESS-------------TT-SB-SEEEE---GGGT-EEEES-T--SS-SS
T ss_pred             CCceEEEecCCCCcCccccEEEEEeCCEEEEeecccccccccccccchhceEeecccCcccccccccccccCCcccCcCC
Confidence            68999999876 899999999999 9999999993200         0012222222211    11111101 0112334


Q ss_pred             ceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 035610           93 FAFEHSRGGYTMYSVADTEKEKGERINSIGRA  124 (144)
Q Consensus        93 ~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~a  124 (144)
                      ..|.|.++.++|+|.|++.+|+.+||++|++|
T Consensus        81 ~~~~i~T~~kt~~l~~~t~~d~~~Wi~aL~~~  112 (112)
T PF15413_consen   81 KVFSIFTPTKTFHLRCETREDRYDWIEALQEA  112 (112)
T ss_dssp             EEEEEE-SS-EEEEEESSHHHHHHHHHHHHH-
T ss_pred             CCcEEECCCcEEEEEECCHHHHHHHHHHHHhC
Confidence            77889999999999999999999999999985

>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain

Probab=99.66  E-value=2.5e-15  Score=94.39  Aligned_cols=94  Identities=18%  Similarity=0.182  Sum_probs=77.7

Q ss_pred             ceEEEEEeeCC-C-CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-cCCCCceEEEEeCC---
Q 035610           28 GAIGPANKQGD-Y-IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-VLNKPFAFEHSRGG---  101 (144)
Q Consensus        28 ~~~G~L~k~~~-~-~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-~~~~~~~f~I~~~~---  101 (144)
                      ++.|||..... . .+.-++|||||+..+|+||++..    ++.++++|+|++ ..++..++ ...++++|.|..++   
T Consensus         2 irkgwl~~~n~~~m~ggsK~~WFVLt~~~L~wykd~e----eKE~kyilpLdn-Lk~Rdve~gf~sk~~~FeLfnpd~rn   76 (110)
T cd01256           2 IRKGWLSISNVGIMKGGSKDYWFVLTSESLSWYKDDE----EKEKKYMLPLDG-LKLRDIEGGFMSRNHKFALFYPDGRN   76 (110)
T ss_pred             eeeeeEEeeccceecCCCcceEEEEecceeeeecccc----cccccceeeccc-cEEEeecccccCCCcEEEEEcCcccc
Confidence            57899988753 3 34579999999999999999998    889999999999 56666654 46788999999653   


Q ss_pred             -----eEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610          102 -----YTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus       102 -----~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                           +++-++|+|.++.+.|...+.+|-+
T Consensus        77 vykd~k~lel~~~~~e~vdswkasflragv  106 (110)
T cd01256          77 VYKDYKQLELGCETLEEVDSWKASFLRAGV  106 (110)
T ss_pred             cccchheeeecCCCHHHHHHHHHHHHhccc
Confidence                 5667999999999999999888643

Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>smart00233 PH Pleckstrin homology domain

Probab=99.64  E-value=1.9e-14  Score=90.47  Aligned_cols=96  Identities=26%  Similarity=0.439  Sum_probs=79.1

Q ss_pred             ceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc--CCCCceEEEEeCCe-E
Q 035610           28 GAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV--LNKPFAFEHSRGGY-T  103 (144)
Q Consensus        28 ~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~--~~~~~~f~I~~~~~-~  103 (144)
                      .++|||.++.. ....|++|||+|.++.|.+|+.+. ......+.+.|+|.++ .+....+.  ...+++|.|..+.+ .
T Consensus         2 ~~~G~l~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~-~~~~~~~~~~i~l~~~-~v~~~~~~~~~~~~~~f~l~~~~~~~   79 (102)
T smart00233        2 IKEGWLYKKSGGKKKSWKKRYFVLFNSTLLYYKSEK-AKKDYKPKGSIDLSGI-TVREAPDPDSAKKPHCFEIKTADRRS   79 (102)
T ss_pred             ceeEEEEEeCCCccCCceEEEEEEECCEEEEEeCCC-ccccCCCceEEECCcC-EEEeCCCCccCCCceEEEEEecCCce
Confidence            57999999976 678999999999999999999876 2112678899999997 54444332  24679999998887 9


Q ss_pred             EEEEcCCHHHHHHHHHHHHHHH
Q 035610          104 MYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus       104 ~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      ++|.|+|..++..|+.+|+.++
T Consensus        80 ~~f~~~s~~~~~~W~~~i~~~~  101 (102)
T smart00233       80 YLLQAESEEEREEWVDALRKAI  101 (102)
T ss_pred             EEEEcCCHHHHHHHHHHHHHhh
Confidence            9999999999999999999875

Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.

>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain

Probab=99.63  E-value=5.6e-15  Score=95.73  Aligned_cols=92  Identities=16%  Similarity=0.236  Sum_probs=66.5

Q ss_pred             eEEEEEee------C--CCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcce--EEeCCceEEEeeccccCCCCceEEEE
Q 035610           29 AIGPANKQ------G--DYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRG--FIPVGTCLTVKCAEDVLNKPFAFEHS   98 (144)
Q Consensus        29 ~~G~L~k~------~--~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~--~i~L~~~~~v~~~~~~~~~~~~f~I~   98 (144)
                      ++|+|..+      |  ...+.|++|||+|+++.|++|+++.+.  .....+  .|+|.++ .+...++...++++|.|.
T Consensus         1 ~~g~l~rk~~~~~~g~~~~~~~Wk~r~~vL~~~~L~~ykd~~~~--~~~~~~~~~i~l~~~-~i~~~~~~~k~~~~F~l~   77 (104)
T cd01253           1 MEGSLERKHELESGGKKASNRSWDNVYGVLCGQSLSFYKDEKMA--AENVHGEPPVDLTGA-QCEVASDYTKKKHVFRLR   77 (104)
T ss_pred             CCceEeEEEEeecCCcccCCCCcceEEEEEeCCEEEEEecCccc--ccCCCCCCcEeccCC-EEEecCCcccCceEEEEE
Confidence            36787643      1  245799999999999999999987511  112223  6677763 333343334677999997


Q ss_pred             eC-CeEEEEEcCCHHHHHHHHHHHHH
Q 035610           99 RG-GYTMYSVADTEKEKGERINSIGR  123 (144)
Q Consensus        99 ~~-~~~~~l~a~s~~e~~~Wi~al~~  123 (144)
                      .+ ++.|+|+|++.+++.+|+.+|+.
T Consensus        78 ~~~~~~~~f~a~s~e~~~~Wi~aL~~  103 (104)
T cd01253          78 LPDGAEFLFQAPDEEEMSSWVRALKS  103 (104)
T ss_pred             ecCCCEEEEECCCHHHHHHHHHHHhc
Confidence            54 57999999999999999999975

Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain

Probab=99.61  E-value=3.3e-14  Score=93.85  Aligned_cols=98  Identities=16%  Similarity=0.201  Sum_probs=74.4

Q ss_pred             eEEEEEee------CC----CCCCceeEEEEEeCCeEEEEecCCCCCCC---CCcceEEeCCceEEEeeccccCCCCceE
Q 035610           29 AIGPANKQ------GD----YIKTWLRRWFILKQGEHFWFKDSHNITRG---STPRGFIPVGTCLTVKCAEDVLNKPFAF   95 (144)
Q Consensus        29 ~~G~L~k~------~~----~~~~w~~R~fvL~~~~l~y~k~~~~~~~~---~~~~~~i~L~~~~~v~~~~~~~~~~~~f   95 (144)
                      ++|+|..+      |.    +.+.|+++||||+++.|++|+++......   ......|.|..+......+. ..+++.|
T Consensus         2 ~~g~l~RK~~~~~~~kk~~~~~R~Wk~~y~vL~g~~L~~yKDe~~~~~~~~~~~~~~~Isi~~a~~~ia~dy-~Kr~~VF   80 (117)
T cd01230           2 KHGALMRKVHADPDCRKTPFGKRSWKMFYGILRGLVLYLQKDEHKPGKSLSETELKNAISIHHALATRASDY-SKKPHVF   80 (117)
T ss_pred             CCcEEEEEEEecCCCccCCCCCCcceEEEEEEECCEEEEEccCcccccccccccccceEEeccceeEeeccc-cCCCcEE
Confidence            57888665      11    24699999999999999999998511111   23457888888663322333 4788999


Q ss_pred             EEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           96 EHSRGG-YTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        96 ~I~~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      .|.+++ +.|+|+|.+.+|++.||.+|+.+...
T Consensus        81 ~L~~~~g~~~lfqA~~~ee~~~Wi~~I~~~~~~  113 (117)
T cd01230          81 RLRTADWREFLFQTSSLKELQSWIERINVVAAA  113 (117)
T ss_pred             EEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence            999875 89999999999999999999998754

EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain

Probab=99.54  E-value=8.1e-14  Score=89.57  Aligned_cols=84  Identities=15%  Similarity=0.295  Sum_probs=64.6

Q ss_pred             CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC----eEEEEEcCCHHHH
Q 035610           39 YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG----YTMYSVADTEKEK  114 (144)
Q Consensus        39 ~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~----~~~~l~a~s~~e~  114 (144)
                      ..+.|++|||+|+++.|+||+++.+.  ...+...+.|.+|.... ......+.++|.+..+.    ++|+|.|+|++++
T Consensus        16 ~~K~~KrrwF~lk~~~L~YyK~kee~--~~~p~i~lnl~gcev~~-dv~~~~~kf~I~l~~ps~~~~r~y~l~cdsEeqy   92 (106)
T cd01237          16 TLKGYKQYWFTFRDTSISYYKSKEDS--NGAPIGQLNLKGCEVTP-DVNVAQQKFHIKLLIPTAEGMNEVWLRCDNEKQY   92 (106)
T ss_pred             hhhhheeEEEEEeCCEEEEEccchhc--CCCCeEEEecCceEEcc-cccccccceEEEEecCCccCCeEEEEECCCHHHH
Confidence            35789999999999999999987611  24566677777755432 22112456888888776    8999999999999


Q ss_pred             HHHHHHHHHHH
Q 035610          115 GERINSIGRAI  125 (144)
Q Consensus       115 ~~Wi~al~~ai  125 (144)
                      .+||++++.|.
T Consensus        93 a~Wmaa~rlas  103 (106)
T cd01237          93 AKWMAACRLAS  103 (106)
T ss_pred             HHHHHHHHHhh
Confidence            99999999864

Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd00821 PH Pleckstrin homology (PH) domain

Probab=99.53  E-value=1.5e-13  Score=85.59  Aligned_cols=93  Identities=25%  Similarity=0.417  Sum_probs=74.8

Q ss_pred             eEEEEEeeCCCC-CCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC-eEEEE
Q 035610           29 AIGPANKQGDYI-KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG-YTMYS  106 (144)
Q Consensus        29 ~~G~L~k~~~~~-~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~-~~~~l  106 (144)
                      ++|||.++.... +.|++|||+|.++.|.+|+... ......+.+.|+|.+ ..+....+....+++|.|...+ +.++|
T Consensus         1 ~~G~l~~~~~~~~~~w~~~~~~L~~~~l~~~~~~~-~~~~~~~~~~i~l~~-~~v~~~~~~~~~~~~f~i~~~~~~~~~~   78 (96)
T cd00821           1 KEGYLLKKTGKLRKGWKRRWFVLFNDLLLYYKKKS-SKKSYKPKGSIPLSG-AEVEESPDDSGRKNCFEIRTPDGRSYLL   78 (96)
T ss_pred             CcchhhhhhChhhCCccEEEEEEECCEEEEEECCC-CCcCCCCcceEEcCC-CEEEECCCcCCCCcEEEEecCCCcEEEE
Confidence            469998887554 7899999999999999999876 100267899999999 4544444323467999999877 89999


Q ss_pred             EcCCHHHHHHHHHHHHH
Q 035610          107 VADTEKEKGERINSIGR  123 (144)
Q Consensus       107 ~a~s~~e~~~Wi~al~~  123 (144)
                      .|+|..++..|+.+|+.
T Consensus        79 ~~~s~~~~~~W~~~l~~   95 (96)
T cd00821          79 QAESEEEREEWIEALQS   95 (96)
T ss_pred             EeCCHHHHHHHHHHHhc
Confidence            99999999999999986

Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd00900 PH-like Pleckstrin homology-like domain

Probab=99.51  E-value=8.1e-13  Score=82.77  Aligned_cols=90  Identities=27%  Similarity=0.375  Sum_probs=73.5

Q ss_pred             EEEEEeeCCCC----CCceeEEEEEeCCeEEEEecCCCCCCCCCcc-eEEeCCceEEEeeccccCCCCceEEEEeC---C
Q 035610           30 IGPANKQGDYI----KTWLRRWFILKQGEHFWFKDSHNITRGSTPR-GFIPVGTCLTVKCAEDVLNKPFAFEHSRG---G  101 (144)
Q Consensus        30 ~G~L~k~~~~~----~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~-~~i~L~~~~~v~~~~~~~~~~~~f~I~~~---~  101 (144)
                      +|||.+++...    +.|++|||+|.++.|.+|+.+.    ..... +.+++.... +....+..+.+++|.|...   .
T Consensus         2 ~g~l~~~~~~~~~~~~~w~~~~~~l~~~~l~~~~~~~----~~~~~~~~~~l~~~~-v~~~~~~~~~~~~F~i~~~~~~~   76 (99)
T cd00900           2 EGYLLKLGSDDVSKGKRWKRRWFFLFDDGLLLYKSDD----KKEIKPGSIPLSEIS-VEEDPDGSDDPNCFAIVTKDRGR   76 (99)
T ss_pred             ccEEEEeCCCccccccCceeeEEEEECCEEEEEEcCC----CCcCCCCEEEccceE-EEECCCCCCCCceEEEECCCCCc
Confidence            68998887543    7999999999999999999986    44444 688998866 5544432356799999977   7


Q ss_pred             eEEEEEcCCHHHHHHHHHHHHHH
Q 035610          102 YTMYSVADTEKEKGERINSIGRA  124 (144)
Q Consensus       102 ~~~~l~a~s~~e~~~Wi~al~~a  124 (144)
                      +.++|.|+|.++++.|+.+|+.+
T Consensus        77 ~~~~~~~~~~~~~~~W~~al~~~   99 (99)
T cd00900          77 RVFVFQADSEEEAQEWVEALQQA   99 (99)
T ss_pred             EEEEEEcCCHHHHHHHHHHHhcC
Confidence            89999999999999999999863

Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.

>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain

Probab=99.42  E-value=9.8e-12  Score=80.40  Aligned_cols=97  Identities=18%  Similarity=0.073  Sum_probs=76.0

Q ss_pred             ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEE
Q 035610           28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSV  107 (144)
Q Consensus        28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~  107 (144)
                      +++|-|.|..  .+.-+.|+|.|-++.|.|-+... ..+....++.++|.++ .|....+....+|+|.|.++.++|.++
T Consensus         5 i~eG~L~K~~--rk~~~~R~ffLFnD~LvY~~~~~-~~~~~~~~~~i~L~~~-~v~~~~d~~~~~n~f~I~~~~kSf~v~   80 (104)
T cd01218           5 VGEGVLTKMC--RKKPKQRQFFLFNDILVYGNIVI-SKKKYNKQHILPLEGV-QVESIEDDGIERNGWIIKTPTKSFAVY   80 (104)
T ss_pred             EecCcEEEee--cCCCceEEEEEecCEEEEEEeec-CCceeeEeeEEEccce-EEEecCCcccccceEEEecCCeEEEEE
Confidence            4689998886  34567799999999999965421 1113456789999995 444454434678999999999999999


Q ss_pred             cCCHHHHHHHHHHHHHHHHhc
Q 035610          108 ADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       108 a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      |+|.+|+.+|+++|..|+.+.
T Consensus        81 A~s~~eK~eWl~~i~~ai~~~  101 (104)
T cd01218          81 AATETEKREWMLHINKCVTDL  101 (104)
T ss_pred             cCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999764

Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A

Probab=99.37  E-value=2.4e-11  Score=80.62  Aligned_cols=96  Identities=22%  Similarity=0.363  Sum_probs=62.4

Q ss_pred             eEEEEEee------CC----CCCCceeEEEEEeCCeEEEEecCCC-----CC-----CCCCcceEEeCCceEEEeecccc
Q 035610           29 AIGPANKQ------GD----YIKTWLRRWFILKQGEHFWFKDSHN-----IT-----RGSTPRGFIPVGTCLTVKCAEDV   88 (144)
Q Consensus        29 ~~G~L~k~------~~----~~~~w~~R~fvL~~~~l~y~k~~~~-----~~-----~~~~~~~~i~L~~~~~v~~~~~~   88 (144)
                      ++|+|..+      |.    ..+.|+..|+||+++.|++|+++..     ..     ....+...|.|..+.... +.+=
T Consensus         2 keG~l~RK~~~~~~gkk~~~~~R~Wk~~y~vL~g~~L~~~k~~~~~~~~~~~~~~~~~~~~p~~~i~L~~a~a~~-a~dY   80 (119)
T PF15410_consen    2 KEGILMRKHELESGGKKASRSKRSWKQVYAVLQGGQLYFYKDEKSPASSTPPDIQSVENAKPDSSISLHHALAEI-ASDY   80 (119)
T ss_dssp             -EEEEEEEEEEECTTCC---S---EEEEEEEEETTEEEEESSHHHHCCT-BS---SS--E-----EE-TT-EEEE-ETTB
T ss_pred             ceEEEEEEEEEcCCCCCcCCCCCCccEEeEEEECCEEEEEccCcccccCCcccccccccCcceeEEEecceEEEe-Cccc
Confidence            68999775      11    3468999999999999999998421     00     112344568999865544 4333


Q ss_pred             CCCCceEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHH
Q 035610           89 LNKPFAFEHSRG-GYTMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus        89 ~~~~~~f~I~~~-~~~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      .+++|+|.|.+. +..|+|+|.|.++|.+||++|.-+.
T Consensus        81 ~Kr~~VFrL~~~dg~e~Lfqa~~~~~m~~Wi~~IN~~A  118 (119)
T PF15410_consen   81 TKRKNVFRLRTADGSEYLFQASDEEEMNEWIDAINYAA  118 (119)
T ss_dssp             TTCSSEEEEE-TTS-EEEEE-SSHHHHHHHHHHHHHH-
T ss_pred             ccCCeEEEEEeCCCCEEEEECCCHHHHHHHHHHHhhhc
Confidence            469999999976 5799999999999999999998753

>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain

Probab=99.23  E-value=3.2e-11  Score=76.59  Aligned_cols=93  Identities=19%  Similarity=0.292  Sum_probs=70.7

Q ss_pred             ceEEEEEeeCC-CCCCceeEEEEEeCCe-----EEEEecCCCCCCCCCcceEEeCCceEEEeecccc----------CCC
Q 035610           28 GAIGPANKQGD-YIKTWLRRWFILKQGE-----HFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV----------LNK   91 (144)
Q Consensus        28 ~~~G~L~k~~~-~~~~w~~R~fvL~~~~-----l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~----------~~~   91 (144)
                      .++|||.+.|+ ..+.|++|||+|.+-.     +..|+.+     ...|...+.|++-+. -..++.          .+.
T Consensus         3 k~sGyL~k~Gg~~~KkWKKRwFvL~qvsQYtfamcsy~ek-----ks~P~e~~qldGyTv-Dy~~~~~~~~~~~~~~~gg   76 (117)
T cd01234           3 KHCGYLYAIGKNVWKKWKKRFFVLVQVSQYTFAMCSYREK-----KAEPTEFIQLDGYTV-DYMPESDPDPNSELSLQGG   76 (117)
T ss_pred             ceeEEEEeccchhhhhhheeEEEEEchhHHHHHHHhhhhh-----cCCchhheeecceEE-eccCCCCCCcccccccccc
Confidence            47999999997 7899999999999744     3345544     577899999999554 222221          134


Q ss_pred             CceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610           92 PFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus        92 ~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      ++-|..+-.+....|+++++.|+.-|+++|-+|.-
T Consensus        77 ~~ff~avkegd~~~fa~~de~~r~lwvqa~yratg  111 (117)
T cd01234          77 RHFFNAVKEGDELKFATDDENERHLWVQAMYRATG  111 (117)
T ss_pred             hhhhheeccCcEEEEeccchHHHHHHHHHHHHHcC
Confidence            45666666778899999999999999999988763

CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain

Probab=99.22  E-value=2.1e-10  Score=74.36  Aligned_cols=93  Identities=14%  Similarity=0.123  Sum_probs=75.8

Q ss_pred             ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc----CCCCceEEEEeCCeE
Q 035610           28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV----LNKPFAFEHSRGGYT  103 (144)
Q Consensus        28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~----~~~~~~f~I~~~~~~  103 (144)
                      .+||||---...-+.|||+|++|..+.|.+|.++.    .......|+|+.+..|......    ...+|||+|.+.+..
T Consensus         1 lkEGWmVHyT~~d~~rKRhYWrLDsK~Itlf~~e~----~skyyKeIPLsEIl~V~~~~~~~~~~~~~~hcFEi~T~~~v   76 (117)
T cd01239           1 LKEGWMVHYTSSDNRRKKHYWRLDSKAITLYQEES----GSRYYKEIPLAEILSVSSNNGDSVLAKHPPHCFEIRTTTNV   76 (117)
T ss_pred             CccceEEEEecCccceeeeEEEecCCeEEEEEcCC----CCeeeEEeehHHheEEeccCCCcCCCCCCCcEEEEEecCEE
Confidence            47999977665557899999999999999999988    8889999999999888754321    356799999999999


Q ss_pred             EEEEcC--------------------CHHHHHHHHHHHHHH
Q 035610          104 MYSVAD--------------------TEKEKGERINSIGRA  124 (144)
Q Consensus       104 ~~l~a~--------------------s~~e~~~Wi~al~~a  124 (144)
                      ||...+                    ....++.|-.||++|
T Consensus        77 Y~VG~~~~~~~~~~~~~~~~~~~sg~g~~~a~~We~aI~qA  117 (117)
T cd01239          77 YFVGGEDYHAFSGGPPKKIPPSDSGRGSDNAQSWETAIRQA  117 (117)
T ss_pred             EEecccccccCCCcccCCCCcccccchhHHHHHHHHHHhcC
Confidence            998543                    345668899999874

Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG1090 consensus Predicted dual-specificity phosphatase [General function prediction only]

Probab=99.22  E-value=3.8e-12  Score=106.68  Aligned_cols=96  Identities=18%  Similarity=0.306  Sum_probs=83.7

Q ss_pred             CCceEEEEEeeCCCCCCceeEEEEEeC--CeEEEEecCCCCCCCCCcceEEeCCceEEEeec-cccCCCCceEEEEeCCe
Q 035610           26 QPGAIGPANKQGDYIKTWLRRWFILKQ--GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA-EDVLNKPFAFEHSRGGY  102 (144)
Q Consensus        26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~--~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~-~~~~~~~~~f~I~~~~~  102 (144)
                      +...+|+|.|+|...+.|+.|||||..  .+|+||.+-.    +..|.|+|+|.....|... .+.++.+--|.+.+..+
T Consensus      1633 Nr~~eG~LyKrGA~lK~Wk~RwFVLd~~khqlrYYd~~e----dt~pkG~IdLaevesv~~~~~k~vdekgffdlktt~r 1708 (1732)
T KOG1090|consen 1633 NRIPEGYLYKRGAKLKLWKPRWFVLDPDKHQLRYYDDFE----DTKPKGCIDLAEVESVALIGPKTVDEKGFFDLKTTNR 1708 (1732)
T ss_pred             ccCcccchhhcchhhcccccceeEecCCccceeeecccc----cccccchhhhhhhhhhcccCccccCccceeeeehhhH
Confidence            455699999999999999999999986  5699999887    8899999999987666543 33456777899999999


Q ss_pred             EEEEEcCCHHHHHHHHHHHHHHH
Q 035610          103 TMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus       103 ~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      .|.|+|.+...+++|++.|++++
T Consensus      1709 vynf~a~nin~AqqWve~iqscl 1731 (1732)
T KOG1090|consen 1709 VYNFCAQNINLAQQWVECIQSCL 1731 (1732)
T ss_pred             HHHHHhccchHHHHHHHHHHHhh
Confidence            99999999999999999999986

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.21  E-value=1.8e-11  Score=93.06  Aligned_cols=98  Identities=21%  Similarity=0.265  Sum_probs=68.6

Q ss_pred             CCceEEEEEeeCCCCCCceeEEEEEe-CCeEEEEecCCCCCCC-CCcceEEeCCceEEEeeccccCCCCceEEEEeC---
Q 035610           26 QPGAIGPANKQGDYIKTWLRRWFILK-QGEHFWFKDSHNITRG-STPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG---  100 (144)
Q Consensus        26 ~~~~~G~L~k~~~~~~~w~~R~fvL~-~~~l~y~k~~~~~~~~-~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~---  100 (144)
                      +.+++|||+|+|...++|+.|||+|. ++.|.-|+.+....+. ..|...+.+..|..+..   ...+||.|-|..-   
T Consensus        14 ~vvkEgWlhKrGE~IknWRpRYF~l~~DG~~~Gyr~kP~~~~~~p~pLNnF~v~~cq~m~~---erPrPntFiiRcLQWT   90 (516)
T KOG0690|consen   14 DVVKEGWLHKRGEHIKNWRPRYFLLFNDGTLLGYRSKPKEVQPTPEPLNNFMVRDCQTMKT---ERPRPNTFIIRCLQWT   90 (516)
T ss_pred             hhHHhhhHhhcchhhhcccceEEEEeeCCceEeeccCCccCCCCcccccchhhhhhhhhhc---cCCCCceEEEEeeeee
Confidence            55699999999999999999999997 4788889987621111 12333333444333321   1367899998742   


Q ss_pred             -CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610          101 -GYTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus       101 -~~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                       --.-.|.++|.+++++|+.||+.+.+
T Consensus        91 TVIERTF~ves~~eRq~W~~AIq~vsn  117 (516)
T KOG0690|consen   91 TVIERTFYVESAEERQEWIEAIQAVSN  117 (516)
T ss_pred             eeeeeeeecCCHHHHHHHHHHHHHHhh
Confidence             22334679999999999999998654

>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain

Probab=99.16  E-value=1e-09  Score=71.85  Aligned_cols=98  Identities=16%  Similarity=0.112  Sum_probs=73.5

Q ss_pred             ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCC---C----CCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC
Q 035610           28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHN---I----TRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG  100 (144)
Q Consensus        28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~---~----~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~  100 (144)
                      +++|-|.|-+...+..+.|+|.|-++.|.|.+....   .    ......+..++|.. ..|...++....+|+|.|.+.
T Consensus         5 I~EG~L~ki~~~~~~~q~R~~FLFd~~Li~CK~~~~~~~~~g~~~~~y~~k~~~~l~~-~~V~d~~d~~~~knaF~I~~~   83 (112)
T cd01261           5 IMEGTLTRVGPSKKAKHERHVFLFDGLMVLCKSNHGQPRLPGASSAEYRLKEKFFMRK-VDINDKPDSSEYKNAFEIILK   83 (112)
T ss_pred             cccCcEEEEecccCCcceEEEEEecCeEEEEEeccCcccccccccceEEEEEEEeeee-eEEEEcCCCcccCceEEEEcC
Confidence            478999888755577899999999999999886540   0    00123356678887 344444443346899999975


Q ss_pred             -CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610          101 -GYTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus       101 -~~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                       .+.+.|+|.|++++.+||++|..++.
T Consensus        84 ~~~s~~l~Akt~eeK~~Wm~~l~~~~~  110 (112)
T cd01261          84 DGNSVIFSAKNAEEKNNWMAALISVQT  110 (112)
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHHhc
Confidence             67899999999999999999998774

Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain

Probab=99.13  E-value=3.4e-09  Score=68.39  Aligned_cols=96  Identities=14%  Similarity=0.262  Sum_probs=72.4

Q ss_pred             eEEEEEeeC--CC--CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecc-------ccCCCCceEEE
Q 035610           29 AIGPANKQG--DY--IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE-------DVLNKPFAFEH   97 (144)
Q Consensus        29 ~~G~L~k~~--~~--~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~-------~~~~~~~~f~I   97 (144)
                      .||||....  +.  -+.|.++|.||.+..|++|..+. ......+...++++....|....       +..+-|..|+|
T Consensus         2 lEGwlsvP~~~~~~~k~gW~r~yvVv~~~Kl~lYd~e~-~~~~~~p~~vldl~~~fhv~~V~asDVi~a~~kDiP~IF~I   80 (112)
T cd01242           2 MEGWLSLPNRTNKSRKPGWKKQYVVVSSRKILFYNDEQ-DKENSTPSMILDIDKLFHVRPVTQGDVYRADAKEIPKIFQI   80 (112)
T ss_pred             cceeEEccCCCCccccCCceEEEEEEeCCEEEEEecCc-cccCCCcEEEEEccceeeeecccHHHeeecCcccCCeEEEE
Confidence            689997653  22  25899999999999999999875 22234577788887644443321       22467889999


Q ss_pred             EeCC--eEEEEEcCCHHHHHHHHHHHHHHH
Q 035610           98 SRGG--YTMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus        98 ~~~~--~~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      ...+  +++++.|++..|.+.|+.+|.+-|
T Consensus        81 ~~~~~~~~lllLA~s~~ek~kWV~~L~~~~  110 (112)
T cd01242          81 LYANEARDLLLLAPQTDEQNKWVSRLVKKI  110 (112)
T ss_pred             EeCCccceEEEEeCCchHHHHHHHHHHHhc
Confidence            8654  889999999999999999998865

Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A

Probab=99.10  E-value=3.2e-09  Score=68.57  Aligned_cols=89  Identities=20%  Similarity=0.182  Sum_probs=66.7

Q ss_pred             CCceEEEEEeeCCCCCCceeEEEEEeCC-eEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEE
Q 035610           26 QPGAIGPANKQGDYIKTWLRRWFILKQG-EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTM  104 (144)
Q Consensus        26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~~-~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~  104 (144)
                      ...+.|.+.|+.+..  .++|+|+|+++ .|+|+....     ....|.|+++....+...     ....|.|.+++++|
T Consensus        12 ~Il~~g~v~K~kgl~--~kkR~liLTd~PrL~Yvdp~~-----~~~KGeI~~~~~l~v~~k-----~~~~F~I~tp~RtY   79 (104)
T PF14593_consen   12 LILKQGYVKKRKGLF--AKKRQLILTDGPRLFYVDPKK-----MVLKGEIPWSKELSVEVK-----SFKTFFIHTPKRTY   79 (104)
T ss_dssp             -EEEEEEEEEEETTE--EEEEEEEEETTTEEEEEETTT-----TEEEEEE--STT-EEEEC-----SSSEEEEEETTEEE
T ss_pred             eEEEEEEEEEeeceE--EEEEEEEEccCCEEEEEECCC-----CeECcEEecCCceEEEEc-----cCCEEEEECCCcEE
Confidence            345899999998765  99999999987 788877764     467799999986666433     22579999999999


Q ss_pred             EEEcCCHHHHHHHHHHHHHHHHh
Q 035610          105 YSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       105 ~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      +|.. ....+..|+++|+.++.+
T Consensus        80 ~l~d-~~~~A~~W~~~I~~~~~~  101 (104)
T PF14593_consen   80 YLED-PEGNAQQWVEAIEEVKKQ  101 (104)
T ss_dssp             EEE--TTS-HHHHHHHHHHHHHH
T ss_pred             EEEC-CCCCHHHHHHHHHHHHHH
Confidence            9876 455588899999998754

>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]

Probab=99.06  E-value=2.5e-10  Score=93.05  Aligned_cols=95  Identities=19%  Similarity=0.231  Sum_probs=80.1

Q ss_pred             eEEEEEeeCC-----CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-cCCCCceEEEEeCCe
Q 035610           29 AIGPANKQGD-----YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-VLNKPFAFEHSRGGY  102 (144)
Q Consensus        29 ~~G~L~k~~~-----~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-~~~~~~~f~I~~~~~  102 (144)
                      ++|.|.++..     +.+.+|+|||-|+...|.|.|++.     ..+.+.|+|.++..|...++ ..+.+|+|+|+.+++
T Consensus       567 k~glm~kr~~gr~~~~~~~FKKryf~LT~~~Ls~~Ksp~-----~q~~~~Ipl~nI~avEklee~sF~~knv~qVV~~dr  641 (800)
T KOG2059|consen  567 KEGLMIKRAQGRGRFGKKNFKKRYFRLTTEELSYAKSPG-----KQPIYTIPLSNIRAVEKLEEKSFKMKNVFQVVHTDR  641 (800)
T ss_pred             cccceEeccccccchhhhhhhheEEEeccceeEEecCCc-----cCcccceeHHHHHHHHHhhhhccCCCceEEEEecCc
Confidence            4566666531     235899999999999999999984     78999999999888876655 578899999999999


Q ss_pred             EEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          103 TMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       103 ~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      +.|++|.+-.|.++|+++|+++....
T Consensus       642 tly~Q~~n~vEandWldaL~kvs~~N  667 (800)
T KOG2059|consen  642 TLYVQAKNCVEANDWLDALRKVSCCN  667 (800)
T ss_pred             ceeEecCCchHHHHHHHHHHHHhccC
Confidence            99999999999999999999965443

>KOG3640 consensus Actin binding protein Anillin [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]

Probab=99.04  E-value=5.5e-10  Score=93.38  Aligned_cols=101  Identities=23%  Similarity=0.334  Sum_probs=80.7

Q ss_pred             CCceEEEEEee--CCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEE--Eeecc-ccCCCCceEEEEeC
Q 035610           26 QPGAIGPANKQ--GDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLT--VKCAE-DVLNKPFAFEHSRG  100 (144)
Q Consensus        26 ~~~~~G~L~k~--~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~--v~~~~-~~~~~~~~f~I~~~  100 (144)
                      +....|||+.-  +.+++.|+||||+|.++.+.|++.+. .++.+.+.+.|+|..|+.  +..+. +...++|.|.|...
T Consensus       989 dVEYrGFLtmfed~sgfGaWhRyWc~L~gg~I~fWk~Pd-DEkrK~Pig~IDLt~CTsq~ie~a~rdicar~ntFhie~~ 1067 (1116)
T KOG3640|consen  989 DVEYRGFLTMFEDGSGFGAWHRYWCALHGGEIKFWKYPD-DEKRKVPIGQIDLTKCTSQSIEEARRDICARPNTFHIEVW 1067 (1116)
T ss_pred             ceeeeeeeeeeeccCCCchhhhhhHHhcCCeeeeecCcc-hhcccCcceeeehhhhhccccccchhhhccCCceeEEEee
Confidence            55678998775  45677899999999999999999876 555778999999999987  43332 34688899999821


Q ss_pred             -------------Ce-EEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610          101 -------------GY-TMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       101 -------------~~-~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                                   .+ ...|+|+|.++++.|+.+|..++..
T Consensus      1068 rPl~~Dqep~~ie~r~Rv~LaADTkeel~~Wls~iN~tL~~ 1108 (1116)
T KOG3640|consen 1068 RPLEDDQEPLLIEKRLRVMLAADTKEELQSWLSAINDTLKQ 1108 (1116)
T ss_pred             cccccccCcchhhhcceeeeecccHHHHHHHHHHHHHHHHH
Confidence                         13 5678999999999999999997753

>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain

Probab=99.00  E-value=2.7e-08  Score=65.19  Aligned_cols=96  Identities=16%  Similarity=0.234  Sum_probs=69.0

Q ss_pred             ceEEEEEee--CCCCCCceeEEEEEeCCeEEEEecCCCC--CCCCCcceEEeC-CceEEEeecc-------ccCCCCceE
Q 035610           28 GAIGPANKQ--GDYIKTWLRRWFILKQGEHFWFKDSHNI--TRGSTPRGFIPV-GTCLTVKCAE-------DVLNKPFAF   95 (144)
Q Consensus        28 ~~~G~L~k~--~~~~~~w~~R~fvL~~~~l~y~k~~~~~--~~~~~~~~~i~L-~~~~~v~~~~-------~~~~~~~~f   95 (144)
                      ..||||...  ++..+.|.++|.||.+..|++|..+...  .+...+.-.+++ ++...|+...       +..+-|+.|
T Consensus         3 ~~EGwvkvP~~~~~krGW~r~~vVv~~~Kl~lYd~e~~k~~~p~~~~~~vLdlrD~~fsV~~VtasDvi~a~~kDiP~If   82 (122)
T cd01243           3 AYEGHVKIPKPGGVKKGWQRALVVVCDFKLFLYDIAEDRASQPSVVISQVLDMRDPEFSVSSVLESDVIHASKKDIPCIF   82 (122)
T ss_pred             cceeeEeccCCCCcccCceEEEEEEeCCEEEEEeCCccccCCccCceeEEEEcCCCCEEEEEecHHHccccCcccCCeEE
Confidence            478999765  3445699999999999999999976511  111334566777 3444444321       124667899


Q ss_pred             EEEe-------CCeEEEEEcCCHHHHHHHHHHHHH
Q 035610           96 EHSR-------GGYTMYSVADTEKEKGERINSIGR  123 (144)
Q Consensus        96 ~I~~-------~~~~~~l~a~s~~e~~~Wi~al~~  123 (144)
                      +|.+       +..+.++-|+|..|+++|+.+|..
T Consensus        83 ~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~  117 (122)
T cd01243          83 RVTTSQISASSSKCSTLMLADTEEEKSKWVGALSE  117 (122)
T ss_pred             EEEEecccCCCCccEEEEEeCCchHHHHHHHHHHH
Confidence            9984       346788999999999999999987

MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain

Probab=98.88  E-value=3.4e-08  Score=63.47  Aligned_cols=92  Identities=15%  Similarity=0.253  Sum_probs=58.7

Q ss_pred             eEEEEEeeCC--CCCCceeEEEEEeCC-eEE-E--EecCC-CC-CCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC
Q 035610           29 AIGPANKQGD--YIKTWLRRWFILKQG-EHF-W--FKDSH-NI-TRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG  100 (144)
Q Consensus        29 ~~G~L~k~~~--~~~~w~~R~fvL~~~-~l~-y--~k~~~-~~-~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~  100 (144)
                      ++|||..+.+  ....|.+.||....+ .++ +  +.... .. .........|.|..|. ++..+. .++++||+|.++
T Consensus         1 k~GYLy~~~k~~~~~~Wvk~y~~~~~~~~~f~m~~~~q~s~~~~~g~v~~~e~~~l~sc~-~r~~~~-~dRRFCFei~~~   78 (104)
T cd01249           1 KEGYLYMQEKSKFGGSWTKYYCTYSKETRIFTMVPFNQKTKTDMKGAVAQDETLTLKSCS-RRKTES-IDKRFCFDVEVE   78 (104)
T ss_pred             CCceEEEEcCCCCCCeEEEEEEEEEcCCcEEEEEecccccccccCcccccceEEeeeecc-ccccCC-ccceeeEeeeec
Confidence            5799999853  334899999988763 332 1  22210 00 0011122345555543 333333 588999999876


Q ss_pred             Ce--EEEEEcCCHHHHHHHHHHHH
Q 035610          101 GY--TMYSVADTEKEKGERINSIG  122 (144)
Q Consensus       101 ~~--~~~l~a~s~~e~~~Wi~al~  122 (144)
                      .+  ++.|+|+|+.++..||+|+.
T Consensus        79 ~~~~~~~lQA~Se~~~~~Wi~A~d  102 (104)
T cd01249          79 EKPGVITMQALSEKDRRLWIEAMD  102 (104)
T ss_pred             CCCCeEEEEecCHHHHHHHHHhhc
Confidence            55  88999999999999999975

Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>KOG3723 consensus PH domain protein Melted [Signal transduction mechanisms]

Probab=98.82  E-value=1.3e-09  Score=87.45  Aligned_cols=124  Identities=22%  Similarity=0.308  Sum_probs=95.4

Q ss_pred             CcccccccCCCCCCCCCCCceeecCCceEEEEEee-CC--CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCc
Q 035610            2 ENVWRASSGQDPNPVDYKGIEFWSQPGAIGPANKQ-GD--YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGT   78 (144)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~k~-~~--~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~   78 (144)
                      .|.|---++..|.... ..++....|..||.|.-+ |.  +.+.|+-|||.|.+..|.|-+...   +..+-...|+|..
T Consensus       711 ~N~W~Cf~CnnPeKa~-yFvn~~gqp~iEGQLKEKKGrWRf~kRW~TrYFTLSgA~L~~~kg~s---~~dS~~~~IDl~~  786 (851)
T KOG3723|consen  711 ANAWQCFMCNNPEKAT-YFVNQDGQPLIEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKS---KDDSDDCPIDLSK  786 (851)
T ss_pred             cCccceeecCChHHee-eeecCCCCchhcchhhhhccchhhhhhhccceEEecchhhhcccCCC---CCCCCCCCccHHH
Confidence            4778888888776655 556667788999999655 42  568999999999999999877543   1233347799999


Q ss_pred             eEEEeeccc---cCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610           79 CLTVKCAED---VLNKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHS  129 (144)
Q Consensus        79 ~~~v~~~~~---~~~~~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~~  129 (144)
                      +.+|+....   ...-+..|+|.+.++++.+.|.+++.+++|++.|+-++....
T Consensus       787 IRSVk~v~~kr~~rslpKAFEIFTAD~T~ILKaKDeKNAEEWlqCL~IavAHa~  840 (851)
T KOG3723|consen  787 IRSVKAVAKKRRDRSLPKAFEIFTADKTYILKAKDEKNAEEWLQCLNIAVAHAK  840 (851)
T ss_pred             hhhHHHHHhhhhhcccchhhheeecCceEEeecccccCHHHHHHHHHHHHHHHH
Confidence            888763321   134467899999999999999999999999999998876543

>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain

Probab=98.80  E-value=3.7e-08  Score=63.72  Aligned_cols=93  Identities=15%  Similarity=0.214  Sum_probs=64.1

Q ss_pred             eEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCc---ceEEeCCceEEEeecc--c--cCCCCceEEEEeCC
Q 035610           29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTP---RGFIPVGTCLTVKCAE--D--VLNKPFAFEHSRGG  101 (144)
Q Consensus        29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~---~~~i~L~~~~~v~~~~--~--~~~~~~~f~I~~~~  101 (144)
                      .+|+|+.+..+-++|+++||+|+...|+|.-...    ...+   .....+++........  .  .....++|.|..+.
T Consensus         2 ~~g~LylK~~gkKsWKk~~f~LR~SGLYy~~Kgk----sk~srdL~cl~~f~~~nvY~~~~~kKk~kAPTd~~F~~K~~~   77 (114)
T cd01259           2 MEGPLYLKADGKKSWKKYYFVLRSSGLYYFPKEK----TKNTRDLACLNLLHGHNVYTGLGWRKKYKSPTDYCFGFKAVG   77 (114)
T ss_pred             ccceEEEccCCCccceEEEEEEeCCeeEEccCCC----cCCHHHHHHHHhcccCcEEEEechhhccCCCCCceEEEeccc
Confidence            5899999988889999999999999998765443    2223   2444555543322221  1  12344888886321


Q ss_pred             -------eEEEEEcCCHHHHHHHHHHHHHHH
Q 035610          102 -------YTMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus       102 -------~~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                             ...+|+|+++..+..|+.+|+-+-
T Consensus        78 ~q~~~s~~ik~lCaeDe~t~~~W~ta~Ri~K  108 (114)
T cd01259          78 DQSKGSQSIKYLCAEDLPTLDRWLTAIRIAK  108 (114)
T ss_pred             cCcccchhheeeccCCHHHHHHHHHHHHHHh
Confidence                   234789999999999999999764

Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>PLN00188 enhanced disease resistance protein (EDR2); Provisional

Probab=98.80  E-value=4.9e-08  Score=80.63  Aligned_cols=101  Identities=14%  Similarity=0.013  Sum_probs=77.8

Q ss_pred             CCceEEEEEeeCC---CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-cCCC--CceEEEEe
Q 035610           26 QPGAIGPANKQGD---YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-VLNK--PFAFEHSR   99 (144)
Q Consensus        26 ~~~~~G~L~k~~~---~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-~~~~--~~~f~I~~   99 (144)
                      ...++|||..-|.   +....++|||||.++.+.|||.+. .. ...|..+..++++..|.+.-. ...+  -+.|.|+.
T Consensus         3 ~~~~eGW~y~~g~~kig~~~~~~Ry~vl~~~~~~~yK~~P-~~-~~~pirs~~id~~~rVed~Gr~~~~g~~~yvl~~Yn   80 (719)
T PLN00188          3 KVVYEGWMVRYGRRKIGRSYIHMRYFVLESRLLAYYKKKP-QD-NQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYN   80 (719)
T ss_pred             cceEeeEEEEEcccccccccceeEEEEEecchhhhcccCC-cc-ccccceeeccCCCceEeecCceEEcCceEEEEEEec
Confidence            3568999988763   456789999999999999999865 21 367888888888777765422 1222  26777774


Q ss_pred             ---CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          100 ---GGYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       100 ---~~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                         .++...+.|.+.+|+.+|+++|+.|+.++
T Consensus        81 ~~~~~~~~~~~a~~~eea~~W~~a~~~a~~q~  112 (719)
T PLN00188         81 KKEKYHRITMAAFNIQEALIWKEKIESVIDQH  112 (719)
T ss_pred             CCCccccEEEecCCHHHHHHHHHHHHHHHhhh
Confidence               45788899999999999999999999864

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=98.68  E-value=2e-07  Score=75.05  Aligned_cols=100  Identities=16%  Similarity=0.136  Sum_probs=67.7

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecc--ccCCCCceEEEEe-C
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE--DVLNKPFAFEHSR-G  100 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~--~~~~~~~~f~I~~-~  100 (144)
                      ..+....||+.+.+... .|++|||.+.++.+....... ..........+.+.....+.+..  ....++++|.|.+ .
T Consensus       374 ~sDv~~~G~l~k~~~~~-~wk~ry~~l~~~~l~~~~~~~-~~~~~~~~~~~~l~~~~~v~pv~~~~~~~~~~~~~i~~~~  451 (478)
T PTZ00267        374 TSDVTHGGYLYKYSSDM-RWKKRYFYIGNGQLRISLSEN-PENDGVAPKSVNLETVNDVFPVPEVYSQKHPNQLVLWFNN  451 (478)
T ss_pred             cCCcccceEEeccCCCc-chhhheEEecCCceEEEeccc-cccCCCCCccccHHHhcccccccHHhcCCCCceEEEEecC
Confidence            44677899999988655 499999999988776543322 00112222333343333333331  1245789999975 4


Q ss_pred             CeEEEEEcCCHHHHHHHHHHHHHHH
Q 035610          101 GYTMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus       101 ~~~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      .+.+++.|+|++++++||.+|+.++
T Consensus       452 ~~~~~~~~~~~~~~~~W~~~~~~~~  476 (478)
T PTZ00267        452 GQKIIAYAKTAEDRDQWISKFQRAC  476 (478)
T ss_pred             CcEEEEecCChHHHHHHHHHHHHHh
Confidence            6788888999999999999999976

>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain

Probab=98.66  E-value=2.9e-08  Score=63.70  Aligned_cols=96  Identities=14%  Similarity=0.125  Sum_probs=72.9

Q ss_pred             CCceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC-CeE
Q 035610           26 QPGAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG-GYT  103 (144)
Q Consensus        26 ~~~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~-~~~  103 (144)
                      ++...|++.|.|+ +...|++|||-|..+.|-++...     .......|.+..+..|.......+..+|+.|... ++.
T Consensus         2 DcIvhGyi~KLGGPFls~WQ~Ry~~LfPNRLE~~~~~-----~~~~~eLi~M~~i~~V~~e~~~iK~~~CI~ik~k~~~k   76 (116)
T cd01240           2 DCIVHGYIKKLGGPFLSQWQTRYFKLYPNRLELYGES-----EANKPELITMDQIEDVSVEFQQIKEENCILLKIRDEKK   76 (116)
T ss_pred             ceEEeeehhhhCCHHHHHHHHHHheeCcceeeecccc-----cccCCcEEEeehhhhcchhheeeccCceEEEEEcCCce
Confidence            5678999999975 77899999999999999986433     2344556666665555433233466688888854 678


Q ss_pred             EEEEcCCHHHHHHHHHHHHHHHH
Q 035610          104 MYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus       104 ~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      +++.+++..+..+|...|+.+..
T Consensus        77 ~vlt~~d~i~l~qW~~elr~a~r   99 (116)
T cd01240          77 IVLTNSDEIELKQWKKELRDAHR   99 (116)
T ss_pred             EEEecCCcHHHHHHHHHHHHHHH
Confidence            99999999999999999998754

Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or

>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain

Probab=98.64  E-value=2e-06  Score=55.85  Aligned_cols=95  Identities=13%  Similarity=-0.015  Sum_probs=67.8

Q ss_pred             ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc------CCCCceEEEEeCC
Q 035610           28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV------LNKPFAFEHSRGG  101 (144)
Q Consensus        28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~------~~~~~~f~I~~~~  101 (144)
                      ..+|-|.+.+.-.+.=+.|+|.|-++.|.|.|...-......-++.|++..+..+ ..++.      ....|+|.|+...
T Consensus         3 i~~Gel~~~s~~~g~~q~R~~FLFD~~LI~CKkd~~r~~~~~yKgri~l~~~~I~-d~~Dg~~~~~~~~~knafkl~~~~   81 (109)
T cd01224           3 FLQGEATRQKQNKGWNSSRVLFLFDHQMVLCKKDLIRRDHLYYKGRIDLDRCEVV-NIRDGKMFSSGHTIKNSLKIYSES   81 (109)
T ss_pred             eEeeeEEEEecccCCcccEEEEEecceEEEEecccccCCcEEEEEEEEcccEEEE-ECCCCccccCCceeEEEEEEEEcC
Confidence            4678888776322233679999999999999964301112445789999995554 33321      1236999999654


Q ss_pred             --eEEEEEcCCHHHHHHHHHHHHH
Q 035610          102 --YTMYSVADTEKEKGERINSIGR  123 (144)
Q Consensus       102 --~~~~l~a~s~~e~~~Wi~al~~  123 (144)
                        ..|.|+|.|.++...|++||..
T Consensus        82 ~~~~~~f~~Kt~e~K~~Wm~a~~~  105 (109)
T cd01224          82 TDEWYLFSFKSAERKHRWLSAFAL  105 (109)
T ss_pred             CCeEEEEEECCHHHHHHHHHHHHH
Confidence              6789999999999999999976

Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain

Probab=98.64  E-value=2e-07  Score=60.48  Aligned_cols=92  Identities=21%  Similarity=0.254  Sum_probs=65.0

Q ss_pred             EEEEeeC---C-CCCCceeEEEEEeCCeEEEEecCCCCCCC--CCcceEEeCC--ceEEEeeccccC---CCCceEEEEe
Q 035610           31 GPANKQG---D-YIKTWLRRWFILKQGEHFWFKDSHNITRG--STPRGFIPVG--TCLTVKCAEDVL---NKPFAFEHSR   99 (144)
Q Consensus        31 G~L~k~~---~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~--~~~~~~i~L~--~~~~v~~~~~~~---~~~~~f~I~~   99 (144)
                      |||..+-   + ..+.|+.+|++|+++.|+.|+... .+..  ..|..+.+|-  -...+.......   +++++|.|.+
T Consensus         3 GW~~E~~~~~~~~~~~wrP~F~aL~~~dl~ly~s~P-~s~e~w~~p~~~y~L~~~atrvv~~~~~~~~~~~~~~~F~irt   81 (108)
T cd01258           3 GWVNEQLSGDDESSQRWRPRFLALKGSEFLFFETPP-LSVEDWSRPLYVYKLYDVATRLVKNSSTRRLNDQRDNCFLIRT   81 (108)
T ss_pred             eecccccCCCCccccccceEEEEEcCCcEEEEeCCC-CCHHHHhChhhhChhHHhhhheeccCCccCcCCCCceEEEEEc
Confidence            8887772   1 357999999999999999999876 2111  2344455554  212232222222   6779999997


Q ss_pred             CC--eEEEEEcCCHHHHHHHHHHHHH
Q 035610          100 GG--YTMYSVADTEKEKGERINSIGR  123 (144)
Q Consensus       100 ~~--~~~~l~a~s~~e~~~Wi~al~~  123 (144)
                      ..  ..++|..++..|+..|..+|++
T Consensus        82 g~~vesh~fsVEt~~dL~~W~raiv~  107 (108)
T cd01258          82 GTQVENHYLRVETHRDLASWERALVR  107 (108)
T ss_pred             CCceeeEEEEecCHHHHHHHHHHHhc
Confidence            65  6889999999999999999975

Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain

Probab=98.57  E-value=1.9e-06  Score=55.12  Aligned_cols=94  Identities=10%  Similarity=-0.071  Sum_probs=68.0

Q ss_pred             eEEEEEeeCCCCCCc-eeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEE
Q 035610           29 AIGPANKQGDYIKTW-LRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSV  107 (144)
Q Consensus        29 ~~G~L~k~~~~~~~w-~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~  107 (144)
                      .+|-|..-......- ++..+.|-++.|.|-....  .+......+++|.+... ....+....+|+|.|.++.+++.++
T Consensus         4 ~~G~l~e~~~~~~kp~~rv~~FLfND~Lvva~~~~--~~ky~~~~~~~L~~i~V-~ni~D~~~~kNafki~t~~~s~i~q   80 (100)
T cd01226           4 LYGELEEFDVETKKPVQRVMLFLLNDRLIVGNINA--AGKYVMESTYSLNSVAV-VNVKDRENAKKVLKLLIFPESRIYQ   80 (100)
T ss_pred             EcCcEEEechhhCCccceEEEEEeccEEEEEEecc--cceEEEEEEEehHHeEE-EecCCCcCcCceEEEEeCCccEEEE
Confidence            455555554333333 4455888888888765432  12455678899999544 4444445678999999999999999


Q ss_pred             cCCHHHHHHHHHHHHHHH
Q 035610          108 ADTEKEKGERINSIGRAI  125 (144)
Q Consensus       108 a~s~~e~~~Wi~al~~ai  125 (144)
                      |+|.++..+|++.|++|.
T Consensus        81 aes~~~K~eWl~~le~a~   98 (100)
T cd01226          81 CESARIKTEWFEELEQAK   98 (100)
T ss_pred             eCCHHHHHHHHHHHHHHh
Confidence            999999999999999986

Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=98.51  E-value=6.1e-08  Score=81.80  Aligned_cols=103  Identities=22%  Similarity=0.315  Sum_probs=78.5

Q ss_pred             CCceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEE
Q 035610           26 QPGAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTM  104 (144)
Q Consensus        26 ~~~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~  104 (144)
                      .....|+|.++.. ..+.|.+|||...++.+.|+..-.    ........+|..| .|+...+...+++||+|+++.++|
T Consensus       273 ~~~~~~~l~~k~~~~~~tw~r~~f~~q~~~l~~~~r~~----~~~~~~~~dL~~c-svk~~~~~~drr~CF~iiS~tks~  347 (785)
T KOG0521|consen  273 GYRMEGYLRKKASNASKTWKRRWFSIQDGQLGYQHRGA----DAENVLIEDLRTC-SVKPDAEQRDRRFCFEIISPTKSY  347 (785)
T ss_pred             hhhhhhhhhhhcccchhhHHhhhhhhhccccccccccc----cccccccccchhc-cccCCcccccceeeEEEecCCcce
Confidence            4446788888754 478999999999988888776543    2222566677774 444444445788999999999999


Q ss_pred             EEEcCCHHHHHHHHHHHHHHHHhcCCCCC
Q 035610          105 YSVADTEKEKGERINSIGRAIVQHSRSVT  133 (144)
Q Consensus       105 ~l~a~s~~e~~~Wi~al~~ai~~~~~~~~  133 (144)
                      .++|+++.+..+||.+|+..+...-.+..
T Consensus       348 ~lQAes~~d~~~Wi~~i~nsi~s~l~~~~  376 (785)
T KOG0521|consen  348 LLQAESEKDCQDWISALQNSILSALNSAF  376 (785)
T ss_pred             EEecCchhHHHHHHHHHHHHHHHHHhccC
Confidence            99999999999999999998876544333

>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain

Probab=98.47  E-value=3.5e-06  Score=52.62  Aligned_cols=85  Identities=18%  Similarity=0.150  Sum_probs=64.3

Q ss_pred             ceEEEEEeeCCCCCCceeEEEEEeCC-eEEEEecCCCCCCCCCcceEEeCCc-eEEEeeccccCCCCceEEEEeCCeEEE
Q 035610           28 GAIGPANKQGDYIKTWLRRWFILKQG-EHFWFKDSHNITRGSTPRGFIPVGT-CLTVKCAEDVLNKPFAFEHSRGGYTMY  105 (144)
Q Consensus        28 ~~~G~L~k~~~~~~~w~~R~fvL~~~-~l~y~k~~~~~~~~~~~~~~i~L~~-~~~v~~~~~~~~~~~~f~I~~~~~~~~  105 (144)
                      .+.|.+.|+.+.  .+++|=++|.+. .|.|....     ....+|.|+++. ...+...     ....|.|.+++++|+
T Consensus         2 l~~g~v~Kr~gl--f~kkR~LiLTd~PrL~yvdp~-----~~~~KgeIp~s~~~l~v~~~-----~~~~F~I~Tp~rty~   69 (89)
T cd01262           2 LKIGAVKKRKGL--FAKKRQLILTNGPRLIYVDPV-----KKVVKGEIPWSDVELRVEVK-----NSSHFFVHTPNKVYS   69 (89)
T ss_pred             ceeeeeeehhcc--ccceeeEEEecCceEEEEcCC-----cCeEEeEecccccceEEEEe-----cCccEEEECCCceEE
Confidence            467889888775  569999999985 56665554     467889999998 5444322     236799999999999


Q ss_pred             EEcCCHHHHHHHHHHHHHHH
Q 035610          106 SVADTEKEKGERINSIGRAI  125 (144)
Q Consensus       106 l~a~s~~e~~~Wi~al~~ai  125 (144)
                      |. +....+..|+.+|..+.
T Consensus        70 le-D~~~~a~~W~~~I~~~~   88 (89)
T cd01262          70 FE-DPKGRASQWKKAIEDLQ   88 (89)
T ss_pred             EE-CCCCCHHHHHHHHHHHh
Confidence            95 44578899999998753

3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain

Probab=98.41  E-value=1.3e-05  Score=51.99  Aligned_cols=95  Identities=17%  Similarity=0.114  Sum_probs=68.4

Q ss_pred             eEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC-eEEEEE
Q 035610           29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG-YTMYSV  107 (144)
Q Consensus        29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~-~~~~l~  107 (144)
                      .-+-+..+.....-=..||++|-...|.+..... ......-.|.++|.+ ..|...++..+.+++|+|..+- ....+.
T Consensus        14 ~mS~V~~~~~~~qe~~eRyLvLFp~~LlilS~s~-r~sGf~yqGkLPL~~-i~v~~lEd~e~~~~aFeI~G~li~~i~v~   91 (111)
T cd01225          14 HMSQVAVQYGAGEEKRERYLVLFPNVLLMLSASP-RMSGFIYQGKLPLTG-IIVTRLEDTEALKNAFEISGPLIERIVVV   91 (111)
T ss_pred             EEEEEEEecCCccccceeEEEEcCceEEEEEcCC-CccceEEeeeecccc-cEEechHhccCccceEEEeccCcCcEEEE
Confidence            3344444433444557899999999999887643 112344578999999 4555555544778999999664 677888


Q ss_pred             cCCHHHHHHHHHHHHHHH
Q 035610          108 ADTEKEKGERINSIGRAI  125 (144)
Q Consensus       108 a~s~~e~~~Wi~al~~ai  125 (144)
                      |.+.+|..+|+..|++-+
T Consensus        92 C~~~~e~~~Wl~hL~~~~  109 (111)
T cd01225          92 CNNPQDAQEWVELLNANN  109 (111)
T ss_pred             eCCHHHHHHHHHHHHhhc
Confidence            999999999999999843

Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain

Probab=98.39  E-value=1.7e-05  Score=50.71  Aligned_cols=90  Identities=17%  Similarity=0.100  Sum_probs=65.1

Q ss_pred             CceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC---eE
Q 035610           27 PGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG---YT  103 (144)
Q Consensus        27 ~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~---~~  103 (144)
                      -.++|.+...+.    =+.|++.|-+..|.+.+...   ....-+..|.++.. .+....+  +.+++|.|....   ..
T Consensus         4 Llleg~l~~~~~----~~eR~vFLFe~~ll~~K~~~---~~y~~K~~i~~~~l-~i~e~~~--~d~~~F~v~~~~~p~~~   73 (97)
T cd01222           4 LLLEGRFREHGG----GKPRLLFLFQTMLLIAKPRG---DKYQFKAYIPCKNL-MLVEHLP--GEPLCFRVIPFDDPKGA   73 (97)
T ss_pred             eeeeceEEeecC----CCceEEEEecccEEEEEecC---CeeEEEEEEEecce-EEecCCC--CCCcEEEEEecCCCceE
Confidence            346777764442    34699999999999988754   23455667777773 3332222  347999998543   68


Q ss_pred             EEEEcCCHHHHHHHHHHHHHHHH
Q 035610          104 MYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus       104 ~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      +.++|.|.+++..|+++|+.++-
T Consensus        74 ~~l~A~s~e~K~~W~~~i~~~i~   96 (97)
T cd01222          74 LQLTARNREEKRIWTQQLKRAML   96 (97)
T ss_pred             EEEEecCHHHHHHHHHHHHHHhh
Confidence            99999999999999999999873

Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>PLN02866 phospholipase D

Probab=98.38  E-value=1.1e-05  Score=69.57  Aligned_cols=101  Identities=15%  Similarity=0.213  Sum_probs=74.7

Q ss_pred             cCCceEEEEEee------CC-----C---------CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceE----
Q 035610           25 SQPGAIGPANKQ------GD-----Y---------IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCL----   80 (144)
Q Consensus        25 ~~~~~~G~L~k~------~~-----~---------~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~----   80 (144)
                      ..-.+||++.|+      |+     .         ...|.+|||+|+.+.|.|..++.    +..++.++.++...    
T Consensus       180 g~K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k~~~l~~~~~p~----~~~~~~v~lfD~~~~~~~  255 (1068)
T PLN02866        180 GPKLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLKPGFLALLEDPF----DAKPLDIIVFDVLPASNG  255 (1068)
T ss_pred             CCCcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEeccEEEEEecCC----CCceeEEEEEeccccccc
Confidence            355689999998      21     0         13699999999999999997776    56677777666322    


Q ss_pred             ----EEeeccc---cCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610           81 ----TVKCAED---VLNKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHS  129 (144)
Q Consensus        81 ----~v~~~~~---~~~~~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~~  129 (144)
                          .+..+..   .....++|.|...++.+.+.|.|...+..|+.+|+.+..++.
T Consensus       256 ~~~~~~~~~~~~k~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~ai~~~~~~~~  311 (1068)
T PLN02866        256 NGEGQISLAKEIKERNPLRFGFKVTCGNRSIRLRTKSSAKVKDWVAAINDAGLRPP  311 (1068)
T ss_pred             CCCcceeecccccccCCCcceEEEecCceEEEEEECCHHHHHHHHHHHHHHHhccC
Confidence                1111111   124468999999999999999999999999999999875443

>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis

Probab=98.37  E-value=2e-05  Score=52.48  Aligned_cols=97  Identities=10%  Similarity=0.017  Sum_probs=66.6

Q ss_pred             eEEEEEeeCCC-----CCCceeEEEEEeC--CeEEEEecCCC-CCCCCCcceEEeCCceEEEeecccc--CC----CCce
Q 035610           29 AIGPANKQGDY-----IKTWLRRWFILKQ--GEHFWFKDSHN-ITRGSTPRGFIPVGTCLTVKCAEDV--LN----KPFA   94 (144)
Q Consensus        29 ~~G~L~k~~~~-----~~~w~~R~fvL~~--~~l~y~k~~~~-~~~~~~~~~~i~L~~~~~v~~~~~~--~~----~~~~   94 (144)
                      .-.||.|-+..     .+..++|||-|..  .+|++...++. ..........+.|..+..|.+....  ..    ..++
T Consensus        11 ~G~~l~Ky~r~~~~~~~~~~h~R~fwv~~~~~~L~Ws~~~p~~~~~~~~~~~~i~I~~v~~V~~~~~~~~~~~~~~~~~s   90 (123)
T PF12814_consen   11 IGEWLYKYTRKGRSGISEKPHRRYFWVDPYTRTLYWSSSNPKSENPSESKAKSIRIESVTEVKDGNPSPPGLKKPDHNKS   90 (123)
T ss_pred             cccEEEEEcccccCccCCCcEEEEEEEeCCCCEEEecCCCCCccccccccccceEEeeeEEecCCCCCCccccccccceE
Confidence            44678885432     3588999999987  56777664421 0111223356778876666544221  11    3477


Q ss_pred             EEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 035610           95 FEHSRGGYTMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus        95 f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      |.|.++++.+-|.|++.++.+-|+.+|+-.+
T Consensus        91 i~i~t~~R~L~l~a~s~~~~~~W~~aL~~L~  121 (123)
T PF12814_consen   91 IIIVTPDRSLDLTAPSRERHEIWFNALRYLL  121 (123)
T ss_pred             EEEEcCCeEEEEEeCCHHHHHHHHHHHHHHh
Confidence            8888999999999999999999999998754

During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex

>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]

Probab=98.29  E-value=2e-06  Score=69.34  Aligned_cols=103  Identities=19%  Similarity=0.109  Sum_probs=76.8

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCC-CCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCe
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHN-ITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGY  102 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~-~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~  102 (144)
                      ....+|+|-|.|.....++-..||++|-++.+.|.+.... .......+..+.+.++. +...+ ....++.|.+..+.+
T Consensus       269 sreLiKEG~l~Kis~k~~~~qeRylfLFNd~~lyc~~r~~~~~~k~~~r~~~s~~~~~-v~~~~-~~~~~~tF~~~G~~r  346 (623)
T KOG4424|consen  269 SRELIKEGQLQKISAKNGTTQERYLFLFNDILLYCKPRKRLPGSKYEVRARCSISHMQ-VQEDD-NEELPHTFILTGKKR  346 (623)
T ss_pred             HHHHhhccceeeeeccCCCcceeEEEEehhHHHhhhhhhhcccceeccceeeccCcch-hcccc-cccCCceEEEecccc
Confidence            3445599999999877889999999999998888765430 11123344555555532 22222 235689999999999


Q ss_pred             EEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          103 TMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       103 ~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      ..-|.|.|.++..+|+++|+.+|..+
T Consensus       347 ~vel~a~t~~ek~eWv~~I~~~Id~~  372 (623)
T KOG4424|consen  347 GVELQARTEQEKKEWVQAIQDAIDKH  372 (623)
T ss_pred             eEEeecCchhhHHHHHHHHHHHHHHH
Confidence            99999999999999999999998765

>KOG1739 consensus Serine/threonine protein kinase GPBP [Signal transduction mechanisms; Defense mechanisms]

Probab=98.24  E-value=2.9e-06  Score=67.28  Aligned_cols=89  Identities=21%  Similarity=0.349  Sum_probs=72.1

Q ss_pred             eEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEEc
Q 035610           29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVA  108 (144)
Q Consensus        29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~a  108 (144)
                      ..|+|.|.......|.-||++|+.+.|.||+++.  .....++|.|.|..... ...+   ...+.|.|......+++.+
T Consensus        26 ~~G~lskwtnyi~gwqdRyv~lk~g~Lsyykse~--E~~hGcRgsi~l~ka~i-~ahE---fDe~rfdIsvn~nv~~lra   99 (611)
T KOG1739|consen   26 RCGVLSKWTNYIHGWQDRYVVLKNGALSYYKSED--ETEHGCRGSICLSKAVI-TAHE---FDECRFDISVNDNVWYLRA   99 (611)
T ss_pred             hcceeeeeecccccccceEEEEcccchhhhhhhh--hhhcccceeeEeccCCc-cccc---chhheeeeEeccceeeehh
Confidence            5788888877788999999999999999999974  23567899999988433 2221   1236799999999999999


Q ss_pred             CCHHHHHHHHHHHHH
Q 035610          109 DTEKEKGERINSIGR  123 (144)
Q Consensus       109 ~s~~e~~~Wi~al~~  123 (144)
                      .+...++.|+++|+-
T Consensus       100 ~~~~hr~~w~d~L~w  114 (611)
T KOG1739|consen  100 QDPDHRQQWIDALEW  114 (611)
T ss_pred             cCcHHHHHHHHHHHH
Confidence            999999999999977

>KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton]

Probab=98.07  E-value=2.7e-06  Score=69.95  Aligned_cols=93  Identities=18%  Similarity=0.324  Sum_probs=73.5

Q ss_pred             eEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEEc
Q 035610           29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVA  108 (144)
Q Consensus        29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~a  108 (144)
                      ++||+.+.+...+.|++||||++.+++.||+.+..  ....+.+.+++.........    .....|++++...++++-+
T Consensus       251 kSgy~~~~~s~~k~lkrr~~v~k~gqi~~y~~~~~--~~~~p~s~~d~~s~~~~~~~----~~s~~fqli~~t~~~~~~~  324 (936)
T KOG0248|consen  251 KSGYWTQLTSRIKSLKRRYVVFKNGQISFYRKHNN--RDEEPASKIDIRSVTKLEQQ----GAAYAFQLITSTDKMNFMT  324 (936)
T ss_pred             cccchhcchHHHHHHHhHheeeccceEEEEEcCCC--ccccccCcccccccceeecc----chhHHhhhhhhceeEEEec
Confidence            68999888888899999999999999999998751  23456667777664333222    3447799998889999999


Q ss_pred             CCHHHHHHHHHHHHHHHHh
Q 035610          109 DTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       109 ~s~~e~~~Wi~al~~ai~~  127 (144)
                      ++..-..+|+.-|+.+|.-
T Consensus       325 ~s~~lt~dw~~iL~~~iKv  343 (936)
T KOG0248|consen  325 ESERTTHDWVTILSAAIKA  343 (936)
T ss_pred             cChhhhhhhHHHHHHHHHH
Confidence            9999999999999887753

>KOG3751 consensus Growth factor receptor-bound proteins (GRB7, GRB10, GRB14) [Signal transduction mechanisms]

Probab=98.04  E-value=1.9e-05  Score=63.34  Aligned_cols=97  Identities=14%  Similarity=0.211  Sum_probs=65.6

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcce---EEeCCceEEEee-c-cc--cCCCCceEE
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRG---FIPVGTCLTVKC-A-ED--VLNKPFAFE   96 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~---~i~L~~~~~v~~-~-~~--~~~~~~~f~   96 (144)
                      ...|.+.|+|+.++.+.+.||+-||||+...|||+-...    ...++.   .-++.+...... + ..  .....++|.
T Consensus       314 ~~~pei~GfL~~K~dgkKsWKk~yf~LR~SGLYys~K~t----sk~~r~Lq~l~~~~~snVYt~i~~rKkyksPTd~~f~  389 (622)
T KOG3751|consen  314 SSPPEIQGFLYLKEDGKKSWKKHYFVLRRSGLYYSTKGT----SKEPRHLQCLADLHSSNVYTGIGGRKKYKSPTDYGFC  389 (622)
T ss_pred             CCCccccceeeecccccccceeEEEEEecCcceEccCCC----CCCchhhHHHHhcccCceEEeecchhccCCCCCceEE
Confidence            457889999999998889999999999999998876554    334432   222333222111 1 11  123347777


Q ss_pred             EEeC-----CeE-EEEEcCCHHHHHHHHHHHHHH
Q 035610           97 HSRG-----GYT-MYSVADTEKEKGERINSIGRA  124 (144)
Q Consensus        97 I~~~-----~~~-~~l~a~s~~e~~~Wi~al~~a  124 (144)
                      |...     .+. -+|+|+++..+..|+.||+-+
T Consensus       390 ~K~~~~~~~~r~lk~lCAEDe~t~~~WltAiRl~  423 (622)
T KOG3751|consen  390 IKPNKLRNKRRFLKMLCAEDEQTRTCWLTAIRLL  423 (622)
T ss_pred             eeeccccCcccceeeeecccchhHHHHHHHHHHH
Confidence            7632     222 368999999999999999875

>cd01223 PH_Vav Vav pleckstrin homology (PH) domain

Probab=98.01  E-value=0.00011  Score=48.21  Aligned_cols=103  Identities=11%  Similarity=0.020  Sum_probs=67.7

Q ss_pred             cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCC--CCCCCcceEEeCCceEEEeec-ccc----CCCCceEEE
Q 035610           25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNI--TRGSTPRGFIPVGTCLTVKCA-EDV----LNKPFAFEH   97 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~--~~~~~~~~~i~L~~~~~v~~~-~~~----~~~~~~f~I   97 (144)
                      .++...|.|.-.......-+.||..|-+..+...|...+.  .+...-+..+.|......... .+.    ....++|.|
T Consensus         2 GR~~~DGelk~k~~~~~k~k~RyiFLFDk~lI~CK~~~~~~~~~~Y~~Ke~~~l~~~~I~~~~~~d~~~~~~~~~~~f~L   81 (116)
T cd01223           2 GRPLLDGEVRIKASEDQKTKLRYIFLFDKAVIVCKALGDNTGDMQYTYKDIHDLADYKIENNPSRDTEGRDTRWKYGFYL   81 (116)
T ss_pred             CccccCCceEEeEeccCCCceeEEEEecceEEEEEecCCCCCCccEEhHHhhhhheeeeEecCccCcccCCcceEEEEEE
Confidence            3566677777665434456799999999999998866410  001223445555553222111 111    235588999


Q ss_pred             EeCC--eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           98 SRGG--YTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        98 ~~~~--~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      ....  ..+.|+|.|++++..||++|..|+..
T Consensus        82 ~~~~~~~~~~f~~Ktee~K~kWm~al~~a~sn  113 (116)
T cd01223          82 AHKQGKTGFTFYFKTEHLRKKWLKALEMAMSN  113 (116)
T ss_pred             EecCCCccEEEEeCCHHHHHHHHHHHHHHHhc
Confidence            8654  57899999999999999999998854

Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=97.96  E-value=2.8e-05  Score=63.09  Aligned_cols=100  Identities=16%  Similarity=0.227  Sum_probs=60.9

Q ss_pred             cCCceEEEEEeeCCCCCCceeEEEEEeCC----eEEEEecCCC---------CCCCCCcceEE--eCCceEEEeeccc--
Q 035610           25 SQPGAIGPANKQGDYIKTWLRRWFILKQG----EHFWFKDSHN---------ITRGSTPRGFI--PVGTCLTVKCAED--   87 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~----~l~y~k~~~~---------~~~~~~~~~~i--~L~~~~~v~~~~~--   87 (144)
                      .-...+|.+.+++... .|++||+.+.+.    ....-.....         ++++.....+|  +++....+.+...  
T Consensus       371 ~~~~~~g~~~~~~~~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (496)
T PTZ00283        371 GLTLYEGIVKKQSSDL-SWKRRYLCIRGELEKGETLTVDVAPKFKSLDLVLAVSKDTLEQQCISTPFSDLEDVFPVPSKY  449 (496)
T ss_pred             CceeeeeEEecccCCc-ccceeEEEEeeecccCceeecCCCccchhhhhhhhhhhhhhhhhcccCchhhhcccccccHHh
Confidence            3455788888876554 499999998742    1111011100         00011111122  3333333444432  


Q ss_pred             -cCCCCceEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHH
Q 035610           88 -VLNKPFAFEHSR-GGYTMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus        88 -~~~~~~~f~I~~-~~~~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                       ..+.++.|.|.. +++.+.|.|.+.++++.||.+||+++
T Consensus       450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (496)
T PTZ00283        450 TGSNAAHVFAVAFKTGRRLLFQARSDPERDAWMQKIQSVL  489 (496)
T ss_pred             hCCCCCcEEEEEecCCcEEEEecCCchhHHHHHHHHHHhc
Confidence             234689999984 67899999999999999999999977

>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain

Probab=97.87  E-value=0.00053  Score=45.71  Aligned_cols=80  Identities=13%  Similarity=0.182  Sum_probs=48.4

Q ss_pred             ceeEEEEEeCCeEEEEecCCC---CCCCCCcceEEeCCceEEEeec----cccCCCCceEEEE------eCCeEEEEEcC
Q 035610           43 WLRRWFILKQGEHFWFKDSHN---ITRGSTPRGFIPVGTCLTVKCA----EDVLNKPFAFEHS------RGGYTMYSVAD  109 (144)
Q Consensus        43 w~~R~fvL~~~~l~y~k~~~~---~~~~~~~~~~i~L~~~~~v~~~----~~~~~~~~~f~I~------~~~~~~~l~a~  109 (144)
                      -+.+|+.|-++.|.|-+.+.+   ...+..++..+.+..+......    ......+|.|.|.      .....+.|.|+
T Consensus        27 ~~~vylfLFnDlLl~tkkK~~~~f~V~dy~~r~~l~V~~~e~~~~~~~~~~~~~~~~~~F~ltLl~N~~gk~~el~L~a~  106 (125)
T cd01221          27 ARTIYLFLFNDLLLITKKKLGSTFVVFDYAPRSFLRVEKIEPDNQKIPLGSNLVGRPNLFLLTLLRNADDKQAELLLSAD  106 (125)
T ss_pred             CCcEEEEEecceEEEEEecCCCeEEEEeeccccceEEeecccccccccccccccCCCceEEEEeeccCCCCEEEEEEECC
Confidence            456899999999999886641   0011112222322221110000    0001467999997      23367899999


Q ss_pred             CHHHHHHHHHHHH
Q 035610          110 TEKEKGERINSIG  122 (144)
Q Consensus       110 s~~e~~~Wi~al~  122 (144)
                      |..|+.+||.||.
T Consensus       107 S~sdr~rWi~Al~  119 (125)
T cd01221         107 SQSDRERWLSALA  119 (125)
T ss_pred             CHHHHHHHHHhcC
Confidence            9999999999974

Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG0932 consensus Guanine nucleotide exchange factor EFA6 [Intracellular trafficking, secretion, and vesicular transport]

Probab=97.77  E-value=1.6e-05  Score=64.33  Aligned_cols=95  Identities=17%  Similarity=0.136  Sum_probs=67.8

Q ss_pred             eEEEEEeeC----------CCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEe-----eccccCCCCc
Q 035610           29 AIGPANKQG----------DYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVK-----CAEDVLNKPF   93 (144)
Q Consensus        29 ~~G~L~k~~----------~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~-----~~~~~~~~~~   93 (144)
                      +.|+|-.+-          .+.+.|+.-|-+|+|-.||+-+++.   +..+.+-.-+|.+.+.|+     ++.+-.+++|
T Consensus       508 k~G~L~RK~had~DgkKTPrGkRgWk~fya~LkG~vLYlqkDey---~p~kalse~~lknavsvHHALAt~AtdY~KKp~  584 (774)
T KOG0932|consen  508 KSGFLARKYHADMDGKKTPRGKRGWKMFYAVLKGMVLYLQKDEY---KPGKALSESDLKNAVSVHHALATPATDYSKKPH  584 (774)
T ss_pred             hhhhhhhhhhccccCCcCCccchhHHHHHHHHhhheEEeecccc---CcccchhhhhhhhhhhhhhhhcCCCcccccCCc
Confidence            678886652          1345788888899999888888764   223333333465544443     3333357889


Q ss_pred             eEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610           94 AFEHSRG-GYTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus        94 ~f~I~~~-~~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      .|.|.+. .+.|.|+|.+.++|+.||..|.-+..
T Consensus       585 Vf~lrtAdwrv~LFQaps~eEmqsWi~rIN~vAA  618 (774)
T KOG0932|consen  585 VFKLRTADWRVFLFQAPSQEEMQSWIERINLVAA  618 (774)
T ss_pred             eEEEEeccceeEEEeCCCHHHHHHHHHHHHHHHH
Confidence            9999965 68999999999999999999987543

>PF15406 PH_6: Pleckstrin homology domain

Probab=97.63  E-value=0.00027  Score=45.63  Aligned_cols=64  Identities=13%  Similarity=0.196  Sum_probs=48.2

Q ss_pred             eCCeEEEEe-cCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 035610           51 KQGEHFWFK-DSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERINSIGR  123 (144)
Q Consensus        51 ~~~~l~y~k-~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~  123 (144)
                      .+.-|.+|. .++    ...|.|+|+|...+.+.     ....+-|.+...+..+.|.|.+..|++.|+.+|..
T Consensus        47 TGKGLLF~~K~~d----ka~P~GiinLadase~~-----~~g~~kF~f~~~G~khtF~A~s~aERD~Wv~~lk~  111 (112)
T PF15406_consen   47 TGKGLLFFSKAED----KASPSGIINLADASEPE-----KDGSNKFHFKIKGHKHTFEAASAAERDNWVAQLKA  111 (112)
T ss_pred             cCceEEEEecccc----ccCCcceEehhhccccc-----cCCCceEEEEeCCceeeeecCCHHHhccHHHHhhc
Confidence            455555554 333    56899999998855542     23446688888889999999999999999999863

>KOG3531 consensus Rho guanine nucleotide exchange factor CDEP [Signal transduction mechanisms]

Probab=97.61  E-value=9.6e-06  Score=68.00  Aligned_cols=93  Identities=17%  Similarity=0.217  Sum_probs=77.2

Q ss_pred             eEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecc-ccCCCCceEEEEeCCeEEEEE
Q 035610           29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE-DVLNKPFAFEHSRGGYTMYSV  107 (144)
Q Consensus        29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~-~~~~~~~~f~I~~~~~~~~l~  107 (144)
                      ..|+|..+-.-...|.+-|.|...-+|++||+-.    +..+..+++|-+...-.+++ +...+.+.|.+...+..|+|.
T Consensus       926 Lsg~LlrkfknssgwqkLwvvft~fcl~fyKS~q----D~~~laslPlLgysvs~P~~~d~i~K~~vfkl~fk~hvyffr 1001 (1036)
T KOG3531|consen  926 LSGYLLRKFKNSSGWQKLWVVFTNFCLFFYKSHQ----DSEPLASLPLLGYSVSIPAEPDPIQKDYVFKLKFKSHVYFFR 1001 (1036)
T ss_pred             hhHHHHHHhhccccceeeeeeecceeeEeecccc----cccccccccccccccCCCCCCCCcchhheeeeehhhhHHHHh
Confidence            5677766644556899999999999999999987    88889999988855533333 356788999999999999999


Q ss_pred             cCCHHHHHHHHHHHHHHH
Q 035610          108 ADTEKEKGERINSIGRAI  125 (144)
Q Consensus       108 a~s~~e~~~Wi~al~~ai  125 (144)
                      |++.-..++|++.|+.+-
T Consensus      1002 aes~yt~~rw~evi~~a~ 1019 (1036)
T KOG3531|consen 1002 AESYYTFERWMEVITDAP 1019 (1036)
T ss_pred             hhhhhhhhhHHHHhhcCC
Confidence            999999999999998853

>KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton]

Probab=97.58  E-value=0.00041  Score=58.81  Aligned_cols=98  Identities=15%  Similarity=0.174  Sum_probs=75.3

Q ss_pred             ecCCceEEEEEeeCC----------CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeec--cc--cC
Q 035610           24 WSQPGAIGPANKQGD----------YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA--ED--VL   89 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~----------~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~--~~--~~   89 (144)
                      ++....+|+|++.-.          ...-..++||||-++.|+||.++.    ...|.+.|.+..+.++...  +.  ..
T Consensus       489 s~s~~~~~fLyc~~sa~~kl~~drr~~Ee~nr~wcVlg~g~ls~fen~~----S~tP~~lI~~~Eivclav~~pd~~pn~  564 (1186)
T KOG1117|consen  489 SQSTFLCGFLYCAPSAASKLSSDRRLREETNRKWCVLGGGFLSYFENEK----STTPNGLININEIVCLAVHPPDTYPNT  564 (1186)
T ss_pred             cccccccceeeechhhccCCCChhhhcccCCCceEEcCcchhhhhhhcC----CCCCCceeeccceEEEeecCCCCCCCc
Confidence            445556799998632          112356799999999999999997    7889999999987775433  22  23


Q ss_pred             CCCceEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHH
Q 035610           90 NKPFAFEHSRG-GYTMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus        90 ~~~~~f~I~~~-~~~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      +..+.|+|..+ ++.|.|-+++.++...|..++-++.
T Consensus       565 ~~~f~fE~~l~~er~~~fgle~ad~l~~wt~aiaKhf  601 (1186)
T KOG1117|consen  565 GFIFIFEIYLPGERVFLFGLETADALRKWTEAIAKHF  601 (1186)
T ss_pred             CceeEEEEeecccceEEeecccHHHHHHHHHHHHHhc
Confidence            55688999965 5778889999999999999998754

>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain

Probab=97.57  E-value=0.00076  Score=42.56  Aligned_cols=87  Identities=13%  Similarity=0.064  Sum_probs=59.0

Q ss_pred             CceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCC---CCCCCCCcceEEeCCceEEEeeccccCCCCceEEEE-eCCe
Q 035610           27 PGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSH---NITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHS-RGGY  102 (144)
Q Consensus        27 ~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~---~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~-~~~~  102 (144)
                      -+++|+|.+--.  +.=+.|-|.|-++.|.|-+-..   .........-.|+|... .+...+        |.+. ++++
T Consensus         3 Lv~eg~lvel~~--~~rK~R~~FLFnDlLvc~~ik~~~~~k~~kY~~~w~IPL~dl-~~~~~~--------~~~~~~~~K   71 (96)
T cd01228           3 LVKDSFLVELVE--GSRKLRHLFLFTDVLLCAKLKKTSRGKHQQYDCKWYIPLADL-SFPSEP--------FRIHNKNGK   71 (96)
T ss_pred             ccccceeeeehh--CCCcceEEEeeccEEEEEEeeeccCccccccceeEEEEhHHh-eecchh--------hhccccCCc
Confidence            356888877642  3457788899999888766431   01123344567888873 332221        4444 5788


Q ss_pred             EEEEEcCCHHHHHHHHHHHHHH
Q 035610          103 TMYSVADTEKEKGERINSIGRA  124 (144)
Q Consensus       103 ~~~l~a~s~~e~~~Wi~al~~a  124 (144)
                      +|.+.|.|..|+.+|+++|++.
T Consensus        72 Sf~~~asS~~Er~eW~~hI~~~   93 (96)
T cd01228          72 SYTFLLSSDYERSEWRESIQKL   93 (96)
T ss_pred             eEEEEecCHHHHHHHHHHHHHH
Confidence            9999999999999999999873

BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton]

Probab=97.55  E-value=3.7e-05  Score=64.86  Aligned_cols=96  Identities=18%  Similarity=0.166  Sum_probs=78.7

Q ss_pred             ecCCceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCe
Q 035610           24 WSQPGAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGY  102 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~  102 (144)
                      ...+.+.|||.|... +..-+.+||..+.+..+.||.+..    +.-+.+.|.+..+..|..     .+.+-|+|.++.+
T Consensus        84 isp~~~~gwldk~~pqg~~~~qkr~vkf~~~s~~yf~~~k----~py~k~~i~va~is~v~~-----~gd~kfevitn~r  154 (1186)
T KOG1117|consen   84 ISPVIKSGWLDKLSPQGEYPFQKRWVKFDGSSLEYFLSPK----DPYSKGPIPVAAISAVRN-----FGDNKFEVITNQR  154 (1186)
T ss_pred             cCchhhcchhhccCcCcccccCccceecCCCCccccCCCC----CCCCCCceeeehhhhhhh-----ccCceEEEEecce
Confidence            446789999999753 445789999999999999999886    566677888887555532     2346799999999


Q ss_pred             EEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          103 TMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       103 ~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      .+.|.+++..++..|++.+++++..+
T Consensus       155 ~fvfr~e~~~~r~~w~s~l~s~~~~Q  180 (1186)
T KOG1117|consen  155 TFVFRQESEGERFIWVSPLQSALKEQ  180 (1186)
T ss_pred             EEEEecCCcccceeeechhhhcchhh
Confidence            99999999999999999999988765

>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain

Probab=97.49  E-value=0.00086  Score=42.74  Aligned_cols=81  Identities=10%  Similarity=0.165  Sum_probs=53.1

Q ss_pred             CCCCceeEEEEEeC----CeEEEEec--CCCCCCCCCcceEEeCCceEEEeecc--ccCCCCceEEEEeC-CeEEEEEcC
Q 035610           39 YIKTWLRRWFILKQ----GEHFWFKD--SHNITRGSTPRGFIPVGTCLTVKCAE--DVLNKPFAFEHSRG-GYTMYSVAD  109 (144)
Q Consensus        39 ~~~~w~~R~fvL~~----~~l~y~k~--~~~~~~~~~~~~~i~L~~~~~v~~~~--~~~~~~~~f~I~~~-~~~~~l~a~  109 (144)
                      +...|++.-.+|..    ..+.+|..  ..    ...|+-.+....+..|+...  +..++.|.|.|... +..|.|-|.
T Consensus        17 ~~~~WqkcRl~L~~~~gg~~le~~~~~pPK----ssrpk~~v~C~~I~EvR~tt~LEmPD~~nTFvLK~~~~~eyI~Ea~   92 (107)
T cd01231          17 SGARWQRGRLVLRKAVGGYMLEFYLPLPPK----SSKPKLQVACSSISEVRECTRLEMPDNLYTFVLKVDDNTDIIFEVG   92 (107)
T ss_pred             CccccceeeEEEEecCCCceEEEEccCCCC----CCCCccccchhhhhhhhhcccccccCcccEEEEEecCCceEEEEcC
Confidence            34578887777762    23444444  33    45566555555544443322  22356799999854 458889999


Q ss_pred             CHHHHHHHHHHHHH
Q 035610          110 TEKEKGERINSIGR  123 (144)
Q Consensus       110 s~~e~~~Wi~al~~  123 (144)
                      +..++++|+..|+.
T Consensus        93 d~~q~~SWla~Ir~  106 (107)
T cd01231          93 DEQQLNSWLAELRY  106 (107)
T ss_pred             CHHHHHHHHHHHhc
Confidence            99999999999985

LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.

>PF15408 PH_7: Pleckstrin homology domain

Probab=97.41  E-value=8.8e-05  Score=45.81  Aligned_cols=87  Identities=14%  Similarity=0.153  Sum_probs=58.7

Q ss_pred             EEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-cCCCCc------eEEEEeCCe
Q 035610           30 IGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-VLNKPF------AFEHSRGGY  102 (144)
Q Consensus        30 ~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-~~~~~~------~f~I~~~~~  102 (144)
                      ||||..-..  +.-++||.+|++..+.+|.++     ......++.|+......+..+ ....+|      +|..+.+++
T Consensus         1 EGYLY~~E~--~si~rRF~~L~~K~~~~~~~K-----GG~~L~sF~L~~s~~s~Pm~~~~~A~~N~Gi~A~G~L~~~~~~   73 (104)
T PF15408_consen    1 EGYLYRDED--SSIQRRFVMLRSKQFNMYEDK-----GGQYLCSFQLSSSVVSHPMVNFSQAVPNLGINAFGFLMYSPSR   73 (104)
T ss_pred             CCeEEEecc--chHHHHHHhhhhceeEEeccc-----CCceeeeeehhhhhhhcccccccccCCCCCeeEEEEEEecCCc
Confidence            578877643  246889999999999888876     366777888877433222222 112232      455555555


Q ss_pred             E-EEEEcCCHHHHHHHHHHHHH
Q 035610          103 T-MYSVADTEKEKGERINSIGR  123 (144)
Q Consensus       103 ~-~~l~a~s~~e~~~Wi~al~~  123 (144)
                      . .-+.|++.+.+++||+++..
T Consensus        74 ~~~~~FA~S~~~~~~Wi~~mN~   95 (104)
T PF15408_consen   74 RHVQCFASSKKVCQSWIQVMNS   95 (104)
T ss_pred             chhhhhhhHHHHHHHHHHHhcC
Confidence            4 45679999999999999876

>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain

Probab=97.39  E-value=0.0042  Score=40.81  Aligned_cols=83  Identities=13%  Similarity=0.165  Sum_probs=54.1

Q ss_pred             CCceeEEEEEeCCeEEEEecCCCCCCCCCc----ceEEeCCceEEEeeccccCCCCceEEEE--eCC---eEEEEEcCCH
Q 035610           41 KTWLRRWFILKQGEHFWFKDSHNITRGSTP----RGFIPVGTCLTVKCAEDVLNKPFAFEHS--RGG---YTMYSVADTE  111 (144)
Q Consensus        41 ~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~----~~~i~L~~~~~v~~~~~~~~~~~~f~I~--~~~---~~~~l~a~s~  111 (144)
                      +.-+.|.+.|-...|.+-+...+......+    +..|.++. ..+.+..+  +.+..|.|-  .+.   ..|.++|.|.
T Consensus        22 ~K~~eR~vFLFe~~lvfsk~~~~~~~~~~~~Y~yK~~ikls~-l~l~e~v~--gd~~kF~i~~~~~~~~~~~~ilqA~s~   98 (114)
T cd01232          22 QKGRERRVFLFEQSIIFAKEVKKKKQFGNPKYIYKSKLQVSK-MGLTEHVE--GDPCRFALWSGDPPISDNRIILKANSQ   98 (114)
T ss_pred             CCCceeEEEEeeceEEEEEEeccCCCCCceeEEEecceeeee-eEeEEccC--CCCceEEEEeCCCCCCceEEEEECCCH
Confidence            455778888999998888864310000112    35566666 33333222  345667775  333   6889999999


Q ss_pred             HHHHHHHHHHHHHHH
Q 035610          112 KEKGERINSIGRAIV  126 (144)
Q Consensus       112 ~e~~~Wi~al~~ai~  126 (144)
                      +..+.|+..|++++.
T Consensus        99 e~K~~W~~~I~~il~  113 (114)
T cd01232          99 ETKQEWVKKIREILQ  113 (114)
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999999763

Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG1451 consensus Oligophrenin-1 and related Rho GTPase-activating proteins [Signal transduction mechanisms]

Probab=97.25  E-value=0.00083  Score=54.97  Aligned_cols=99  Identities=14%  Similarity=0.186  Sum_probs=67.5

Q ss_pred             ecCCceEEEEEeeC--CCCCCceeEEEEEeCCe-EEEEecCCC-CCCCCCcceEEeCCceEEEeeccccCCCCceEEEEe
Q 035610           24 WSQPGAIGPANKQG--DYIKTWLRRWFILKQGE-HFWFKDSHN-ITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSR   99 (144)
Q Consensus        24 ~~~~~~~G~L~k~~--~~~~~w~~R~fvL~~~~-l~y~k~~~~-~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~   99 (144)
                      ..++.++|||..|.  ....+|-+.||+..... ..-.-+-.. ...+..+...+.|..|+.  ...+..++++||.|..
T Consensus       262 p~p~t~eGYlY~QEK~~~g~sWvKyYC~Y~retk~~TMvp~~qk~g~k~g~~~~~~lKsC~R--RktdSIdKRFCFDve~  339 (812)
T KOG1451|consen  262 PTPSTKEGYLYMQEKSKIGKSWVKYYCVYSRETKIFTMVPANQKTGTKMGQTATFKLKSCSR--RKTDSIDKRFCFDVEV  339 (812)
T ss_pred             CCCcccceeeeehhhhhccchhhhheeEeecccceEEEeecccCCCCcCCCcceEEehhhcc--Ccccccccceeeeeee
Confidence            45677999999984  45679999999987643 222222110 011223445566666543  3344568899999996


Q ss_pred             CC--eEEEEEcCCHHHHHHHHHHHHHH
Q 035610          100 GG--YTMYSVADTEKEKGERINSIGRA  124 (144)
Q Consensus       100 ~~--~~~~l~a~s~~e~~~Wi~al~~a  124 (144)
                      .+  +.+.++|-+++++..||+|+-.+
T Consensus       340 ~erpgviTmQALSE~drrlWmeAMDG~  366 (812)
T KOG1451|consen  340 EERPGVITMQALSEKDRRLWMEAMDGA  366 (812)
T ss_pred             cccCCeeehHhhhhhHHHHHHHHhcCC
Confidence            54  57888999999999999998764

>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain

Probab=96.93  E-value=0.024  Score=37.03  Aligned_cols=76  Identities=17%  Similarity=0.272  Sum_probs=51.0

Q ss_pred             ceeEEEEEeC-CeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc-------------CCCCceEEEEeCC----eEE
Q 035610           43 WLRRWFILKQ-GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV-------------LNKPFAFEHSRGG----YTM  104 (144)
Q Consensus        43 w~~R~fvL~~-~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~-------------~~~~~~f~I~~~~----~~~  104 (144)
                      -++|+|.|.. +...++.+..     ......++|+.+..|+.....             .....+|.|+...    +.+
T Consensus        21 ~~~~~f~ld~~~~~l~W~~~~-----~~~~~~l~i~~IkeIR~G~~~k~~~~~~~~~~~~~~e~~~fTIiy~~~~~~k~L   95 (115)
T cd01248          21 ERRRLFRLDEKGFFLYWKDEG-----KKEKKVLDISSIKEIRTGKQPKDLKLRAELNQGNSLEERCFTIVYGTDLNLKSL   95 (115)
T ss_pred             eeeEEEEEcCCCcEEEEeCCC-----CccccEEEehhhhhhhCCCCCcchHHhhhhhcCCCccccEEEEEECCCCCeeEE
Confidence            3567788864 4444444432     225667888887766654321             1334789998543    478


Q ss_pred             EEEcCCHHHHHHHHHHHHH
Q 035610          105 YSVADTEKEKGERINSIGR  123 (144)
Q Consensus       105 ~l~a~s~~e~~~Wi~al~~  123 (144)
                      .|.|+|.++++.|+..|+.
T Consensus        96 ~lVA~s~~~a~~W~~gL~~  114 (115)
T cd01248          96 DLVAPSEEEAKTWVSGLRK  114 (115)
T ss_pred             EEEECCHHHHHHHHHHHhh
Confidence            8999999999999999874

Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG3543 consensus Ca2+-dependent activator protein [Signal transduction mechanisms]

Probab=96.68  E-value=0.00042  Score=57.20  Aligned_cols=98  Identities=18%  Similarity=0.260  Sum_probs=70.2

Q ss_pred             cCCceEEEEEeeCC-CCCCceeEEEEEeCCe-----EEEEecCCCCCCCCCcceEEeCCceEEE-eeccc-cCCCCceEE
Q 035610           25 SQPGAIGPANKQGD-YIKTWLRRWFILKQGE-----HFWFKDSHNITRGSTPRGFIPVGTCLTV-KCAED-VLNKPFAFE   96 (144)
Q Consensus        25 ~~~~~~G~L~k~~~-~~~~w~~R~fvL~~~~-----l~y~k~~~~~~~~~~~~~~i~L~~~~~v-~~~~~-~~~~~~~f~   96 (144)
                      .+-..+|||+-.|. ..+.|++|||+|-.-.     +..|+.+     ...|...|.|++.+.- .++.+ ..+.++-|.
T Consensus       462 ~nmkhsgylyaig~nvwkrwkkrffvlvqvsqytfamcsyrek-----kaepqel~qldgytvdytdp~pglqgg~~ffn  536 (1218)
T KOG3543|consen  462 PNMKHSGYLYAIGRNVWKRWKKRFFVLVQVSQYTFAMCSYREK-----KAEPQELIQLDGYTVDYTDPSPGLQGGKHFFN  536 (1218)
T ss_pred             CccccceeehhhhhHHHHHhHhhEEEEEEhhhhhhHhhhhhhc-----ccChHHHhhccCeeeccCCCCCccccchHHHH
Confidence            34456899988874 5689999999997533     3345554     4678889999995542 12222 234445566


Q ss_pred             EEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           97 HSRGGYTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        97 I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      -.-.+.+..|+.+++.++.-|++|+-+|..+
T Consensus       537 avkegdtvifasddeqdr~lwvqamyratgq  567 (1218)
T KOG3543|consen  537 AVKEGDTVIFASDDEQDRHLWVQAMYRATGQ  567 (1218)
T ss_pred             HhccCceEEeccCchhhhhHHHHHHHHhhCC
Confidence            6667788999999999999999999987654

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=96.31  E-value=0.0063  Score=50.00  Aligned_cols=95  Identities=15%  Similarity=0.117  Sum_probs=65.9

Q ss_pred             CCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-----cCCCCceEEEEeC
Q 035610           26 QPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-----VLNKPFAFEHSRG  100 (144)
Q Consensus        26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-----~~~~~~~f~I~~~  100 (144)
                      ...+|||+---...-..=++-|..|...++..|.++.    ...-...|+|+.+..|.....     ....+|||+|.+.
T Consensus       412 t~~kEGWmvHyt~~d~lRkrHYWrldsk~itlfqn~s----~~ryYkeIPLsEIl~v~~~~~~~~vp~~~~phcFEI~T~  487 (888)
T KOG4236|consen  412 TKLKEGWMVHYTSKDNLRKRHYWRLDSKCITLFQNES----TNRYYKEIPLSEILSVSSNNGFSLVPAGTNPHCFEIRTA  487 (888)
T ss_pred             hhhhcceEEEEechhhhhhhhhheeccceeEeeecCC----CceeEEeecHHHhheeeccCCcccCCCCCCCceEEEEee
Confidence            4457899755432111223446679999999999887    566678999999888765542     2456799999988


Q ss_pred             CeEEEEEcCC------------HHHHHHHHHHHHHHH
Q 035610          101 GYTMYSVADT------------EKEKGERINSIGRAI  125 (144)
Q Consensus       101 ~~~~~l~a~s------------~~e~~~Wi~al~~ai  125 (144)
                      .-.|+ ..++            ...++.|-.+|+.|+
T Consensus       488 ~~vyf-Vge~p~~~~~~~~g~g~d~a~~w~~ai~~al  523 (888)
T KOG4236|consen  488 TTVYF-VGENPSSTPGGESGVGLDAAQGWETAIQQAL  523 (888)
T ss_pred             eEEEE-ecCCCCCCccccccccchhhccCchhhhhcc
Confidence            74444 4444            455889999999865

>KOG1737 consensus Oxysterol-binding protein [Lipid transport and metabolism]

Probab=96.30  E-value=0.0045  Score=52.68  Aligned_cols=91  Identities=18%  Similarity=0.125  Sum_probs=63.0

Q ss_pred             CceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEE
Q 035610           27 PGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYS  106 (144)
Q Consensus        27 ~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l  106 (144)
                      ...+|||.|.....+.|++|||+|.++.+.||++...  ....+++.+.+.. ..+...+.    .....+......++.
T Consensus        77 ~~~~g~l~k~~n~~~~~~~r~f~l~~g~ls~~~~~~~--~~~~~~~~~~~~~-a~i~~~~~----~~~~~~~~~~q~~~~  149 (799)
T KOG1737|consen   77 ASLEGILLKWRNYSKGPSSRWFVLSGGLLSYYFDNSF--SKTTCGGGINLVT-AWIQNGER----MDICSVDGSCQIYLV  149 (799)
T ss_pred             ccccceeeccccccCCcccceEEecCcceeeeccCCc--cccCCCCcccccc-cccccCCC----cccchhhcccchhhh
Confidence            3467999999989999999999999989999987651  1345666666655 23221111    111122222456777


Q ss_pred             EcCCHHHHHHHHHHHHHH
Q 035610          107 VADTEKEKGERINSIGRA  124 (144)
Q Consensus       107 ~a~s~~e~~~Wi~al~~a  124 (144)
                      .+.+..+.+.|+.+++.+
T Consensus       150 ~~~~~~~~~~~~~~~~l~  167 (799)
T KOG1737|consen  150 ELSKKLQRQGWLHALELA  167 (799)
T ss_pred             hhhHHHhhcchhhhhhhc
Confidence            888999999999999886

>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain

Probab=95.97  E-value=0.15  Score=34.37  Aligned_cols=85  Identities=15%  Similarity=0.189  Sum_probs=54.1

Q ss_pred             CceeEEEEEeCCeEEEEecCCCCCC-CCCc----ceEEeCCceEEEeeccccCCCCceEEEEeC--CeEEEEEcCCHHHH
Q 035610           42 TWLRRWFILKQGEHFWFKDSHNITR-GSTP----RGFIPVGTCLTVKCAEDVLNKPFAFEHSRG--GYTMYSVADTEKEK  114 (144)
Q Consensus        42 ~w~~R~fvL~~~~l~y~k~~~~~~~-~~~~----~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~--~~~~~l~a~s~~e~  114 (144)
                      .-+.|++.|-+..+.+.+...+... ...|    +..|.++. ..+.  +...+.+..|.|-+.  ...|.++|.|.+..
T Consensus        28 K~~eRhVFLFE~~viF~K~~~~~~~~~~~p~Y~yK~~ikls~-lglt--e~v~gd~~kFeiw~~~~~~~yilqA~t~e~K  104 (133)
T cd01227          28 KPMQRHIFLHEKAVLFCKKREENGEGEKAPSYSFKQSLKMTA-VGIT--ENVKGDTKKFEIWYNAREEVYILQAPTPEIK  104 (133)
T ss_pred             CCceeEEEEecceEEEEEEeccCCCCCcceeEEEeeeEEeec-cccc--ccCCCCccEEEEEeCCCCcEEEEEcCCHHHH
Confidence            3467999999998888876530000 0112    23444433 2221  222244677888753  45888999999999


Q ss_pred             HHHHHHHHHHHHhcC
Q 035610          115 GERINSIGRAIVQHS  129 (144)
Q Consensus       115 ~~Wi~al~~ai~~~~  129 (144)
                      +.|+..|+..+.++.
T Consensus       105 ~~Wv~~I~~iL~~Q~  119 (133)
T cd01227         105 AAWVNEIRKVLTSQL  119 (133)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999776653

Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>PF15411 PH_10: Pleckstrin homology domain

Probab=95.86  E-value=0.27  Score=32.36  Aligned_cols=92  Identities=10%  Similarity=-0.017  Sum_probs=60.4

Q ss_pred             CCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCC---------------CCCcceEEeCCceEEEeeccccCC
Q 035610           26 QPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITR---------------GSTPRGFIPVGTCLTVKCAEDVLN   90 (144)
Q Consensus        26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~---------------~~~~~~~i~L~~~~~v~~~~~~~~   90 (144)
                      +-...|-+.....  ..|+..++-|-...|..++.......               .-..+|.|.+..+..|....  ..
T Consensus         6 ~Lll~g~~~V~k~--~~erE~~vYLFe~illc~kE~~~~~~~~~~~~~~~~~~~~~~L~LKGrI~i~~i~~v~~~s--~~   81 (116)
T PF15411_consen    6 ELLLHGTLTVGKD--DSEREYEVYLFEKILLCCKEVKPKKKKSKQISSKKKKKKKTKLQLKGRIYISNITEVSSSS--KP   81 (116)
T ss_pred             ceEEccEEEEEeC--CcceeeeeeeeeeeEEEEecCccCccchhhcccccccCCCceEEEeeEEEEEeeeeeeccC--CC
Confidence            3344555555443  57999999999999988886542111               00124666666655554332  24


Q ss_pred             CCceEEEEe----CCeEEEEEcCCHHHHHHHHHHH
Q 035610           91 KPFAFEHSR----GGYTMYSVADTEKEKGERINSI  121 (144)
Q Consensus        91 ~~~~f~I~~----~~~~~~l~a~s~~e~~~Wi~al  121 (144)
                      ..+.++|.-    ....|.+...+++.++.|-.+|
T Consensus        82 g~~~L~i~w~~d~e~~~F~lrf~nee~l~~W~~~L  116 (116)
T PF15411_consen   82 GSYSLQISWKGDPELENFTLRFRNEEQLEQWRSAL  116 (116)
T ss_pred             CceEEEEEEcCCCCCceEEEEeCCHHHHHHHHhhC
Confidence            557888885    2368999999999999998875

>KOG1738 consensus Membrane-associated guanylate kinase-interacting protein/connector enhancer of KSR-like [Nucleotide transport and metabolism]

Probab=95.53  E-value=0.00098  Score=54.75  Aligned_cols=68  Identities=19%  Similarity=0.369  Sum_probs=51.3

Q ss_pred             ceeecCCceEEEEEeeCC---CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCc
Q 035610           21 IEFWSQPGAIGPANKQGD---YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPF   93 (144)
Q Consensus        21 ~~~~~~~~~~G~L~k~~~---~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~   93 (144)
                      ++...+....||+++...   +...|++-||||.+..|+.|.++.    ...+.++|.|-. ..+..+.+..+++.
T Consensus       556 ~~~l~~G~~qg~~~r~k~~~~~~~kW~k~~~~l~~~~l~~y~n~~----~~~~e~~i~l~~-~~i~~a~e~~~~~~  626 (638)
T KOG1738|consen  556 LELLGRGDRQGWLTRLKLNHLTQEKWRKIWMVLNDDPLLNYRNHR----VRAAESVIKLPL-FTISVAEEVLGKPE  626 (638)
T ss_pred             HHHhccchhhccchhhccchHHHHHhhhheeeecCchhhhhhhhh----hhchhheeeccc-hhhhhHHHhccCHh
Confidence            444557778899988752   456899999999999999999987    778889999988 55555555434443

>KOG3523 consensus Putative guanine nucleotide exchange factor TIM [Signal transduction mechanisms]

Probab=95.48  E-value=0.028  Score=46.45  Aligned_cols=81  Identities=12%  Similarity=0.160  Sum_probs=51.0

Q ss_pred             CceeEEEEEeCCeEEEEecCCC---CCCCCCcceEEeCCceEEEeecc----ccCCCCceEEEEe----C--CeEEEEEc
Q 035610           42 TWLRRWFILKQGEHFWFKDSHN---ITRGSTPRGFIPVGTCLTVKCAE----DVLNKPFAFEHSR----G--GYTMYSVA  108 (144)
Q Consensus        42 ~w~~R~fvL~~~~l~y~k~~~~---~~~~~~~~~~i~L~~~~~v~~~~----~~~~~~~~f~I~~----~--~~~~~l~a  108 (144)
                      ..+.-|+.|-++.|.+-+.+.+   ...+..++..+.+..|.......    .....+|.|.+.-    .  .-.+.|.|
T Consensus       498 ~~~~vylfLFnD~Llitk~k~~~~f~V~Dya~r~~l~ve~~e~~~~lp~~~~~~~~~~hlF~ltLl~N~~~~~~e~lL~a  577 (695)
T KOG3523|consen  498 LSKTVYLFLFNDLLLITKKKSEGSFQVFDYAPRSLLQVEKCEPELKLPGGANSLSSRPHLFLLTLLSNHQGRQTELLLSA  577 (695)
T ss_pred             ccceeeeeeecceeeEeeecCCCceEEeeccchhhhhhhhcCcccCCCCCCcccccccceEEEehhhccCCCceeeeecC
Confidence            4566789999999988887652   11223344455444433100000    1134567888872    2  24678899


Q ss_pred             CCHHHHHHHHHHHH
Q 035610          109 DTEKEKGERINSIG  122 (144)
Q Consensus       109 ~s~~e~~~Wi~al~  122 (144)
                      +|..|++.||.||.
T Consensus       578 ~s~Sd~~RWi~Al~  591 (695)
T KOG3523|consen  578 ESQSDRQRWISALR  591 (695)
T ss_pred             CchHHHHHHHHhcC
Confidence            99999999999987

>KOG3549 consensus Syntrophins (type gamma) [Extracellular structures]

Probab=95.47  E-value=0.022  Score=44.23  Aligned_cols=103  Identities=19%  Similarity=0.178  Sum_probs=66.6

Q ss_pred             ecCCceEEEEEee--CC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcc--eEEeC--CceEEEeeccccCCCCceEE
Q 035610           24 WSQPGAIGPANKQ--GD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPR--GFIPV--GTCLTVKCAEDVLNKPFAFE   96 (144)
Q Consensus        24 ~~~~~~~G~L~k~--~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~--~~i~L--~~~~~v~~~~~~~~~~~~f~   96 (144)
                      ..+...-||..-.  +. ..+.++.||..|++.+++.|..++ ++--.-.+  ....+  ..+..+++.+-.-.+++||.
T Consensus       278 ~~qivyMGWvne~~q~~~s~q~y~P~FLaLkG~~~y~F~tPP-v~t~dw~rAe~ty~vye~mfki~Kdsd~~D~R~~CF~  356 (505)
T KOG3549|consen  278 GEQIVYMGWVNEGVQNNISWQSYKPRFLALKGTEVYLFETPP-VNTADWSRAEVTYKVYETMFKIVKDSDTVDSRQHCFL  356 (505)
T ss_pred             cceEEEeeeccccccCcccccccCceeEEecCcEEEEEcCCC-cchhhhhhhhhhHHHHHHHHHHhccccccccccceEE
Confidence            3445567898665  22 346789999999999999998765 11000000  01111  01111222222236789999


Q ss_pred             EEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           97 HSRG-GYTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        97 I~~~-~~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      |... +...||..+...|...|-.+.+.|+.-
T Consensus       357 ~qs~~ge~~yfsVEl~seLa~wE~sfq~Atf~  388 (505)
T KOG3549|consen  357 LQSSGGEPRYFSVELRSELARWENSFQAATFT  388 (505)
T ss_pred             EEcCCCCceEEEEehhhHHHHHHHHHhhHHhH
Confidence            9965 568899999999999999999998654

>KOG4807 consensus F-actin binding protein, regulates actin cytoskeletal organization [Cytoskeleton]

Probab=95.38  E-value=5.3e-05  Score=59.03  Aligned_cols=83  Identities=17%  Similarity=0.378  Sum_probs=67.0

Q ss_pred             CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEEcCCHHHHHHHHH
Q 035610           40 IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERIN  119 (144)
Q Consensus        40 ~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~a~s~~e~~~Wi~  119 (144)
                      ...|++-||++....+.||.+.. -......-+.|+|..|..|...  .....++|+|.+.+..|-+.+.+......||.
T Consensus        32 t~~~~k~~~~~~~~~~~~~~d~~-A~~~~~L~~~~~LR~C~~v~e~--a~q~nY~~~i~~~~~~~tL~~~~s~Ir~~~~~  108 (593)
T KOG4807|consen   32 TSQWKKHWFVLTDSSLKYYRDST-AEEADELDGEIDLRSCTDVTEY--AVQRNYGFQIHTKDAVYTLSAMTSGIRRNWIE  108 (593)
T ss_pred             hHHHHHHHHHHhHHHHHHHHHHH-HHhcccCCccccHHHHHHHHHH--HHHhccceeecccchhhhhHHHHHHHHHHHHH
Confidence            34699999999999999999864 1123345688999998776432  24677999999999999999999999999999


Q ss_pred             HHHHHH
Q 035610          120 SIGRAI  125 (144)
Q Consensus       120 al~~ai  125 (144)
                      ++++.+
T Consensus       109 A~~kT~  114 (593)
T KOG4807|consen  109 ALRKTV  114 (593)
T ss_pred             HHHhcc
Confidence            999855

>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A

Probab=95.07  E-value=0.15  Score=34.49  Aligned_cols=94  Identities=16%  Similarity=0.212  Sum_probs=41.4

Q ss_pred             eEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCC---CCCCcceEEeCCceEEEeeccc------------------
Q 035610           29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNIT---RGSTPRGFIPVGTCLTVKCAED------------------   87 (144)
Q Consensus        29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~---~~~~~~~~i~L~~~~~v~~~~~------------------   87 (144)
                      .+|-|.+++.....|..-.++|-++.|..-|.+. ..   .-..-+..|+|.-... ...++                  
T Consensus         3 ~~G~L~Rk~~~~~~~~di~~~LFDh~Lll~K~k~-~~k~e~ykV~r~PIPLeLL~l-~~~~d~~~~~~~~~r~s~s~~~~   80 (135)
T PF15405_consen    3 YKGDLKRKGDNSFNWVDIHVYLFDHYLLLTKPKK-VNKREQYKVYRRPIPLELLVL-ESMDDPPPQRSIAKRPSSSLISS   80 (135)
T ss_dssp             --------------S-EEEEEEESSEEEEEEEEE-ETTEEEEEESS--EEGGG-EE-EE--TTTS---------S-----
T ss_pred             cccccccccccccccceeEEEeeccEEEEEEEEe-cCCeEEEEEEECCcCHHHeee-ecccCCCcccCcccccccCccCC
Confidence            5688888877666788888888888888777653 10   0011234555554221 11000                  


Q ss_pred             ------------cCCCCce--EEEEeC---CeEEEEEcCCHHHHHHHHHHHHHH
Q 035610           88 ------------VLNKPFA--FEHSRG---GYTMYSVADTEKEKGERINSIGRA  124 (144)
Q Consensus        88 ------------~~~~~~~--f~I~~~---~~~~~l~a~s~~e~~~Wi~al~~a  124 (144)
                                  ....+..  |.+..-   +..|.|+|+|..++++|+++|.++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~yp~~~~hlG~~~~~~TLyA~s~~~R~~W~e~I~~q  134 (135)
T PF15405_consen   81 SSSNSNSPSNPNSSDSKSLYPFTFRHLGRKGYSYTLYASSAQARQKWLEKIEEQ  134 (135)
T ss_dssp             --SHHHH--------TSSEEEEEE---GGG-EEEEEE-SSHHHHHHHHHHHHHH
T ss_pred             ccCCCCccceeeeccCCCccCEEEEEcCCCceEEEEEeCCHHHHHHHHHHHHhc
Confidence                        0112333  444322   345789999999999999999874

>KOG2070 consensus Guanine nucleotide exchange factor [Nucleotide transport and metabolism]

Probab=94.02  E-value=0.1  Score=42.34  Aligned_cols=78  Identities=19%  Similarity=0.266  Sum_probs=56.1

Q ss_pred             eeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHH
Q 035610           44 LRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG-YTMYSVADTEKEKGERINSIG  122 (144)
Q Consensus        44 ~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~-~~~~l~a~s~~e~~~Wi~al~  122 (144)
                      +.|||+|-.+.|.++.-...+ ....-.|.++++| ..|...++.-...+.|.|...- ......|....+.++|+.+++
T Consensus       326 ~dRy~~LF~~~llflsvs~rM-s~fIyegKlp~tG-~iV~klEdte~~~nafeis~~ti~rIv~~c~~~~~l~~wve~ln  403 (661)
T KOG2070|consen  326 KDRYLLLFPNVLLFLSVSPRM-SGFIYEGKLPTTG-MIVTKLEDTENHRNAFEISGSTIERIVVSCNNQQDLQEWVEHLN  403 (661)
T ss_pred             hhheeeeccceeeeeEecccc-chhhhccccccce-eEEeehhhhhcccccccccccchhheeeccCChHHHHHHHHHhh
Confidence            589999999998887754301 1123356788888 5666666544677889988543 345567999999999999998


Q ss_pred             H
Q 035610          123 R  123 (144)
Q Consensus       123 ~  123 (144)
                      .
T Consensus       404 ~  404 (661)
T KOG2070|consen  404 K  404 (661)
T ss_pred             h
Confidence            6

>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]

Probab=93.46  E-value=0.078  Score=43.64  Aligned_cols=96  Identities=10%  Similarity=0.037  Sum_probs=68.4

Q ss_pred             eEEEEEeeCCCCCCceeEEEEEe---CCeEEEEecCCCCCCCCCcceEEeCCceEEEeec-cccCCCCceEEEEeCCeEE
Q 035610           29 AIGPANKQGDYIKTWLRRWFILK---QGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA-EDVLNKPFAFEHSRGGYTM  104 (144)
Q Consensus        29 ~~G~L~k~~~~~~~w~~R~fvL~---~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~-~~~~~~~~~f~I~~~~~~~  104 (144)
                      ..+.|.+.......|...|+++-   ...++.|....    +......|+|.+|....+. ....+..+.|.+......+
T Consensus       499 ~~s~l~~~~~~~~~g~~a~~~vP~~d~~~~~~Yg~~q----Dv~a~~~iPl~~~~v~~pe~~~~~D~~~~~k~~~s~~~~  574 (623)
T KOG4424|consen  499 ICSHLKYMEAAGKTGILAWSVVPKSDPLVDYSYGSPQ----DVRAQATIPLPGVEVTIPEFVRREDLFHVFKLVQSHLSW  574 (623)
T ss_pred             ehhhHHHHhhcCccceeeeeeccCCCCccccccCCcc----ccccccccccCccccCCCcccccchhcchhhhhhhccee
Confidence            34444333335568999998874   24577788776    7778899999996543111 1223555778888777899


Q ss_pred             EEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          105 YSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       105 ~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      ++.|+|.+-.+.|++.|..|....
T Consensus       575 ~~~a~~~q~qq~wl~~l~~A~~~d  598 (623)
T KOG4424|consen  575 HLAADDEQLQQRWLEVLLLAVSGD  598 (623)
T ss_pred             eeccCCHHHHHHHHHHHHhhhccc
Confidence            999999999999999999987553

>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]

Probab=93.25  E-value=0.056  Score=42.58  Aligned_cols=99  Identities=19%  Similarity=0.197  Sum_probs=67.4

Q ss_pred             CCceEEEEEee--CCCCCCceeEEEEEeCCeEEEEecCCC-CCCCCCcceEEeCCceEEEeeccccC----CCCceEEEE
Q 035610           26 QPGAIGPANKQ--GDYIKTWLRRWFILKQGEHFWFKDSHN-ITRGSTPRGFIPVGTCLTVKCAEDVL----NKPFAFEHS   98 (144)
Q Consensus        26 ~~~~~G~L~k~--~~~~~~w~~R~fvL~~~~l~y~k~~~~-~~~~~~~~~~i~L~~~~~v~~~~~~~----~~~~~f~I~   98 (144)
                      +...-|||.+|  +++.+.|+..+.+|.+..|.+|.+... .+.=..|..+.+|--...|.......    +....|.+.
T Consensus       291 evkHiGWLaeq~~~~G~~~w~P~l~~lTekelliYes~P~~keaws~P~~~ypLvaTRLvhsg~~~~s~~~g~~lsFa~R  370 (506)
T KOG3551|consen  291 EVKHIGWLAEQVSGGGISQWKPKLMALTEKELLIYESMPWTKEAWSRPRHTYPLVATRLVHSGSGKGSVIKGLTLSFATR  370 (506)
T ss_pred             chhhhhhHHhhccCCChhhhhhheeeechhhhhhhhcChhhHHHhcChhhhhhhhhhhheecCCCCCCCcCCceEEEEEe
Confidence            33456999887  556778999999999999998887541 11124566677776544455443321    112356666


Q ss_pred             eCC----eEEEEEcCCHHHHHHHHHHHHHH
Q 035610           99 RGG----YTMYSVADTEKEKGERINSIGRA  124 (144)
Q Consensus        99 ~~~----~~~~l~a~s~~e~~~Wi~al~~a  124 (144)
                      +..    .++.|.++|..|+..|...|-+.
T Consensus       371 tGTrqGV~thlfrvEThrdLa~WtRslVqG  400 (506)
T KOG3551|consen  371 TGTRQGVETHLFRVETHRELAAWTRSLVQG  400 (506)
T ss_pred             cccccceEEEEEEeccHHHHHHHHHHHHHH
Confidence            542    57889999999999999988653

>cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain

Probab=93.10  E-value=1.9  Score=29.50  Aligned_cols=82  Identities=16%  Similarity=0.235  Sum_probs=51.6

Q ss_pred             eEEEEEeCCeEEEEecCCCCCCCCC----------------cceEEeCCceEEEeecc-ccCCCCceEEEEe--------
Q 035610           45 RRWFILKQGEHFWFKDSHNITRGST----------------PRGFIPVGTCLTVKCAE-DVLNKPFAFEHSR--------   99 (144)
Q Consensus        45 ~R~fvL~~~~l~y~k~~~~~~~~~~----------------~~~~i~L~~~~~v~~~~-~~~~~~~~f~I~~--------   99 (144)
                      -.-||.+.-.+..|+... ..+.+-                -+..|+++. ..|+... ......+.+.|+.        
T Consensus        51 ~~~FVFK~AVVlv~ke~~-K~KkKl~~~~r~~~~~e~dp~rfr~miP~~a-lQVR~~n~ad~e~~~vwEliH~kSe~egR  128 (160)
T cd01255          51 LMCFVFKSAVVLVYKERL-KQKKKLMGVSRKNATNEVDPFRFRVLIPVTA-LQVRASSAADMESNFLWELIHLKSELEGR  128 (160)
T ss_pred             EEEEEecceEEEEEcCcc-hhhhccccccccccccccCceeEEEeeceee-eeeecCCCcCcccceEEEEEeecccccCC
Confidence            356778887777777643 100000                122455544 3333222 1245557777773        


Q ss_pred             CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          100 GGYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       100 ~~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      +++.|.|+|.+.+.++..+..|++.+.+.
T Consensus       129 pE~vfqLCcS~~E~k~~flK~Irsilre~  157 (160)
T cd01255         129 PEKVFVLCCSTAESRNAFLKTIRSILRES  157 (160)
T ss_pred             CcceEEEecCCHHHHHHHHHHHHHHHHHH
Confidence            45789999999999999999999987654

TIAM Pleckstrin homology (PH) domain. TIAM (T-cell invasion and metastasis) is a guanine nucleotide exchange factor specific for RAC1. It consists of an N-terminal PH domain followed by Raf-like ras binding domain(RDB), a PDZ domain, a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. This subfamily contains the alignment of the PH domain that follows the DH domain.

>KOG3727 consensus Mitogen inducible gene product (contains ERM and PH domains) [Cell cycle control, cell division, chromosome partitioning]

Probab=92.97  E-value=0.016  Score=47.37  Aligned_cols=92  Identities=15%  Similarity=0.151  Sum_probs=55.5

Q ss_pred             CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEE---eCCeEEEEEcCCHHHHHH
Q 035610           40 IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHS---RGGYTMYSVADTEKEKGE  116 (144)
Q Consensus        40 ~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~---~~~~~~~l~a~s~~e~~~  116 (144)
                      .+.+++.||....-.+.+|++.. .+ ...|...|.+.+|.....+.....+-+-|.+.   .....+++.|+++.....
T Consensus       372 ~Kg~kr~f~t~~dl~~~~~~s~~-~s-~~ap~~~i~l~gcev~~dV~~~~~k~~i~l~~~~~~~msEi~LRCd~E~QYA~  449 (664)
T KOG3727|consen  372 LKGYKRYFFTFRDLHLSLYKSSE-DS-RGAPAISINLKGCEVTPDVNLSQQKYAIKLLVPTAEGMSEIWLRCDNEQQYAR  449 (664)
T ss_pred             hhhhhhHHHHHHHHHHHHHhhHh-hh-cCCCCCchhhcCcccCCccccccccceEEEEeecCCccceeEEecCCHHHHHH
Confidence            34556666655554444444433 12 25677888888875533333321222233333   234688999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCcc
Q 035610          117 RINSIGRAIVQHSRSVTES  135 (144)
Q Consensus       117 Wi~al~~ai~~~~~~~~~~  135 (144)
                      ||.|.+-|.  .++++.|+
T Consensus       450 WMAaCrLAS--KGktMADS  466 (664)
T KOG3727|consen  450 WMAACRLAS--KGKTMADS  466 (664)
T ss_pred             HHHHhhHhh--cCCccccc
Confidence            999998866  45555543

>KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton]

Probab=92.95  E-value=0.029  Score=47.07  Aligned_cols=88  Identities=5%  Similarity=-0.222  Sum_probs=63.2

Q ss_pred             CceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEE
Q 035610           27 PGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYS  106 (144)
Q Consensus        27 ~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l  106 (144)
                      +.+.|+|.++....+.|+.+||++.++.+.+++++.    + .+.+.+.+.+..........    -.-+++....++++
T Consensus       259 ~s~~k~lkrr~~v~k~gqi~~y~~~~~~~~~p~s~~----d-~~s~~~~~~~~~s~~fqli~----~t~~~~~~~~s~~l  329 (936)
T KOG0248|consen  259 TSRIKSLKRRYVVFKNGQISFYRKHNNRDEEPASKI----D-IRSVTKLEQQGAAYAFQLIT----STDKMNFMTESERT  329 (936)
T ss_pred             hHHHHHHHhHheeeccceEEEEEcCCCccccccCcc----c-ccccceeeccchhHHhhhhh----hceeEEEeccChhh
Confidence            456788888888899999999999999999999885    3 34455545543333222211    11234455567889


Q ss_pred             EcCCHHHHHHHHHHHHH
Q 035610          107 VADTEKEKGERINSIGR  123 (144)
Q Consensus       107 ~a~s~~e~~~Wi~al~~  123 (144)
                      .++...-.++||.+++.
T Consensus       330 t~dw~~iL~~~iKv~~~  346 (936)
T KOG0248|consen  330 THDWVTILSAAIKATTL  346 (936)
T ss_pred             hhhhHHHHHHHHHHHhc
Confidence            99999999999999876

>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]

Probab=90.56  E-value=0.37  Score=41.63  Aligned_cols=59  Identities=25%  Similarity=0.254  Sum_probs=42.8

Q ss_pred             CcceEEeCCceEEEeeccccCCCCceEEEE---eCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           69 TPRGFIPVGTCLTVKCAEDVLNKPFAFEHS---RGGYTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        69 ~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~---~~~~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      -.+|..++..+..|......-++.+.|.|.   +....+.++|++.+++.+|+.+|+++.-.
T Consensus       851 l~rgi~d~~~~nvv~~~q~~n~~~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t~~  912 (1267)
T KOG1264|consen  851 LCRGILDLNTYNVVKAPQGKNQKSFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREITWK  912 (1267)
T ss_pred             hhhccccccccceeecccccCCcceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHHHH
Confidence            345677777766666555544556777776   23457789999999999999999986543

>KOG3531 consensus Rho guanine nucleotide exchange factor CDEP [Signal transduction mechanisms]

Probab=87.49  E-value=0.52  Score=40.70  Aligned_cols=96  Identities=21%  Similarity=0.220  Sum_probs=64.9

Q ss_pred             eEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEEc
Q 035610           29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVA  108 (144)
Q Consensus        29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~a  108 (144)
                      ..|-|.|...  +.-+.|-|.|-...|.|-.......+.....|-+++.  ..++.+++....||||.|.+..+..+.+|
T Consensus       752 r~g~llK~sk--kgLqqrmfFLfsdillytsk~~~~~~~fri~g~lP~~--l~~en~en~~s~p~~~ti~~~qk~i~vsa  827 (1036)
T KOG3531|consen  752 RSGCLLKLSK--KGLQQRMFFLFSDILLYTSKGPDVQKCFRINGDLPLT--LTMENSENEWSVPHCFTISGAQKQIYVSA  827 (1036)
T ss_pred             hcCCchhhcc--ccchhhhhhhhhhhheeccCCCChhheeEeccCCceE--eeeecccccccCCceEEEeccceEEEEec
Confidence            4566666542  3456676677766665533321122233445555555  33445555568899999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHHhc
Q 035610          109 DTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       109 ~s~~e~~~Wi~al~~ai~~~  128 (144)
                      .+..+.++|...++.+|.-.
T Consensus       828 st~~~sk~~~~~r~~~i~~~  847 (1036)
T KOG3531|consen  828 STRRESKKWEFDRRKAIDLA  847 (1036)
T ss_pred             cchhhhhhhhhccchhhhhc
Confidence            99999999999988887543

>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function

Probab=87.43  E-value=2.6  Score=27.43  Aligned_cols=37  Identities=14%  Similarity=0.099  Sum_probs=32.0

Q ss_pred             CCceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           91 KPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        91 ~~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      ..+.|-|.|..+..-|-|+|..+.+.|.++|+.-+..
T Consensus        69 ~~~yfgL~T~~G~vEfec~~~~~~k~W~~gI~~mL~~  105 (110)
T PF08458_consen   69 ERRYFGLKTAQGVVEFECDSQREYKRWVQGIQHMLSQ  105 (110)
T ss_pred             eEEEEEEEecCcEEEEEeCChhhHHHHHHHHHHHHHH
Confidence            4467899999999999999999999999999986543

>PF15404 PH_4: Pleckstrin homology domain

Probab=86.99  E-value=1.3  Score=31.59  Aligned_cols=32  Identities=16%  Similarity=0.151  Sum_probs=28.1

Q ss_pred             eEEEEEeeCCCCCCceeEEEEEeCCeEEEEec
Q 035610           29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKD   60 (144)
Q Consensus        29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~   60 (144)
                      +.|.|..+.+.-..|+++|+||..|.|..|..
T Consensus         1 ~sG~LY~K~~khs~F~~~~vvL~~G~Li~f~~   32 (185)
T PF15404_consen    1 MSGYLYQKPRKHSTFKKYFVVLIPGFLILFQL   32 (185)
T ss_pred             CCceeeecCCCCCCceEEEEEEeCCEEEEEEE
Confidence            46899988877789999999999999998886

>KOG4047 consensus Docking protein 1 (p62dok) [Signal transduction mechanisms]

Probab=86.91  E-value=0.55  Score=37.69  Aligned_cols=101  Identities=13%  Similarity=0.049  Sum_probs=60.8

Q ss_pred             cCCceEEEEEeeCCC--CCCceeEEEEEeCCe------EEEEecCC--CCCCCCC-cceEEeCCceEEEeeccccCCCC-
Q 035610           25 SQPGAIGPANKQGDY--IKTWLRRWFILKQGE------HFWFKDSH--NITRGST-PRGFIPVGTCLTVKCAEDVLNKP-   92 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~--~~~w~~R~fvL~~~~------l~y~k~~~--~~~~~~~-~~~~i~L~~~~~v~~~~~~~~~~-   92 (144)
                      ...++.|++..+...  .+.|+++|.+|..+.      |-.|..+.  ++..... .+..+.|+.|.++..+..+...+ 
T Consensus         6 ~~~~k~g~~~~~~~r~~~k~~~~~~~~L~~gs~~g~aRle~~~~~g~~~~~~~~~~~rR~~~ls~~~S~e~~~~~~~~~~   85 (429)
T KOG4047|consen    6 SCLVKDGVPDNHRNKFKVKNVRDDGAELGSGSMELTARLEILESRGRESVRWPYRCLRRYGYLSNLFSFESGRRCQTGPG   85 (429)
T ss_pred             CcccccCccchhhhhhccccccccceeeeccccccchhhhhhhccCCcccccchhcceeeEeeccceeeecccccccCCC
Confidence            345677777666433  359999999998654      22333221  0111111 23778889988887765543233 


Q ss_pred             -ceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           93 -FAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        93 -~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                       ..|-..+...  +|.+....+...|+++|......
T Consensus        86 i~~~f~~~a~e--~~~~~q~l~~~~w~~~i~~~~~~  119 (429)
T KOG4047|consen   86 ITAFFCDRAEE--LFNMLQDLMQANWINAIEEPAIP  119 (429)
T ss_pred             ceEEEecchHH--HHHHHHHHHhhhhhhhhhhcccc
Confidence             3333332222  67788888899999999885443

>KOG2996 consensus Rho guanine nucleotide exchange factor VAV3 [Signal transduction mechanisms]

Probab=86.17  E-value=3.4  Score=34.71  Aligned_cols=106  Identities=13%  Similarity=0.077  Sum_probs=71.0

Q ss_pred             ceeecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeec--cc--c-----CCC
Q 035610           21 IEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA--ED--V-----LNK   91 (144)
Q Consensus        21 ~~~~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~--~~--~-----~~~   91 (144)
                      .+-+.+|...|-|.......++=+.||..|-+..+...|...   ........|.|... .+...  .+  .     ...
T Consensus       400 l~~~GRpkiDGElki~s~~~~tkqdRyiFLfDkvviVCKrkG---~sy~lke~i~l~~y-~m~d~~~~~kd~kk~~~~~w  475 (865)
T KOG2996|consen  400 LHDFGRPKIDGELKITSTQAHTKQDRYIFLFDKVVIVCKRKG---DSYELKEIIYLNAY-KMSDDPIDDKDNKKVSTITW  475 (865)
T ss_pred             HHHhCCCCcCceEEEeehhcCCccceEEeEecceEEEeeccC---cchhHHHHHHHHhh-ccccCCCCchhhhhccceee
Confidence            344678888999988765556778899999999988888765   12223334444331 11111  11  1     124


Q ss_pred             CceEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhcCC
Q 035610           92 PFAFEHSRG--GYTMYSVADTEKEKGERINSIGRAIVQHSR  130 (144)
Q Consensus        92 ~~~f~I~~~--~~~~~l~a~s~~e~~~Wi~al~~ai~~~~~  130 (144)
                      .++|.|+..  ...+-|++.+++-+..||+++.-|+.....
T Consensus       476 s~~f~lI~tqg~ngl~fy~Kte~~kkkWmeqfema~SNi~P  516 (865)
T KOG2996|consen  476 SYGFYLIHTQGRNGLEFYCKTEDLKKKWMEQFEMAKSNISP  516 (865)
T ss_pred             eeeEEEEEEcCCcceEEEEecHHHHHHHHHHHHHHHhcCCc
Confidence            578888743  347889999999999999999998865543

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=86.11  E-value=0.66  Score=38.56  Aligned_cols=33  Identities=27%  Similarity=0.280  Sum_probs=28.8

Q ss_pred             eEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610           94 AFEHSR-GGYTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus        94 ~f~I~~-~~~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      +|.|+. ....++|.|.+.+|++.|+++|+..|.
T Consensus       447 ~F~IVs~tgqtWhFeAtt~EERdaWvQai~sqIl  480 (749)
T KOG0705|consen  447 CFEIVSNTGQTWHFEATTYEERDAWVQAIQSQIL  480 (749)
T ss_pred             eEEEeccccchhhhhhcchhhHHHHHHHHHHHHH
Confidence            899885 467889999999999999999998664

>KOG3520 consensus Predicted guanine nucleotide exchange factor [Signal transduction mechanisms]

Probab=81.42  E-value=2.9  Score=37.56  Aligned_cols=68  Identities=18%  Similarity=0.166  Sum_probs=45.9

Q ss_pred             CeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610           53 GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG---GYTMYSVADTEKEKGERINSIGRAIVQHS  129 (144)
Q Consensus        53 ~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~---~~~~~l~a~s~~e~~~Wi~al~~ai~~~~  129 (144)
                      +.-++|+...      ....+|.|... .|+...  ..++-.|.|.+.   ...|-+.|.|..|++.||+.|+.++..-.
T Consensus       655 D~Kyifksl~------~~spVisL~~l-ivRevA--td~ka~FlIs~s~~~pqmYEL~a~T~serntW~~li~~~v~s~~  725 (1167)
T KOG3520|consen  655 DQKYIFKSLD------KKSPVISLQKL-IVREVA--TDEKAFFLISMSDQGPEMYELVAQSKSERNTWIQLIQDAVASCP  725 (1167)
T ss_pred             CceeEeeccc------cCCCceehHHH-HHHHHh--ccccceEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhCC
Confidence            3455666543      24567777773 443332  234455777754   46788999999999999999999886544

>KOG4407 consensus Predicted Rho GTPase-activating protein [General function prediction only]

Probab=80.39  E-value=0.057  Score=48.36  Aligned_cols=104  Identities=13%  Similarity=0.105  Sum_probs=68.9

Q ss_pred             ceeecCCceEEEEEee----------CCCCCCceeEEEEEeCCeEEEEecCCCCC----------CCCCcceEEeCCceE
Q 035610           21 IEFWSQPGAIGPANKQ----------GDYIKTWLRRWFILKQGEHFWFKDSHNIT----------RGSTPRGFIPVGTCL   80 (144)
Q Consensus        21 ~~~~~~~~~~G~L~k~----------~~~~~~w~~R~fvL~~~~l~y~k~~~~~~----------~~~~~~~~i~L~~~~   80 (144)
                      .+.+.+..++|||+.+          |.....|+.-|-+|.++.++.+++..+-.          ........+.+..|.
T Consensus       917 ~e~Fsd~~megWly~~q~~SkkGk~tGssLr~wk~~y~~l~ghsl~L~ss~re~~~~~aas~as~~~st~tts~c~nscl  996 (1973)
T KOG4407|consen  917 IELFSDSEMEGWLYVLQSSSKKGKATGSSLREWKLSYTGLHGHSLVLNSSAREHNSQSAASLASSSCSTATTSECLNSCL  996 (1973)
T ss_pred             hhhhhhhhhhcceeeeeecccCCcccCcchhhhhhHHHHhccccceecccccccCcchhhhhcccccccccCccccccch
Confidence            4557788899999764          23456899999999999999998875200          001112233344432


Q ss_pred             EEeeccccCCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHH
Q 035610           81 TVKCAEDVLNKPFAFEHSRGG-YTMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus        81 ~v~~~~~~~~~~~~f~I~~~~-~~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      ... .....++.+.|++.+.+ -.+.|.+++.+++-.|+...++..
T Consensus       997 tdI-~ysetkrn~vfRLTt~d~ce~lfqaeDrddmlgG~~ttq~St 1041 (1973)
T KOG4407|consen  997 TDI-QYSETKRNQVFRLTTNDLCEGLFQAEDRDDMLGGLSTTQSST 1041 (1973)
T ss_pred             hhh-hhhhhhhhhHHHhHHHHHHhHhhccCccccccchhhhhhhcc
Confidence            211 11224566788888765 466789999999999999997754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	144
1fhw_A	129	Structure Of The Pleckstrin Homology Domain From Gr		4e-04
2r0d_A	347	Crystal Structure Of Autoinhibited Form Of Grp1 Arf		5e-04
1fhx_A	129	Structure Of The Pleckstrin Homology Domain From Gr		5e-04
2r09_A	347	Crystal Structure Of Autoinhibited Form Of Grp1 Arf		5e-04

>pdb|1FHW|A Chain A, Structure Of The Pleckstrin Homology Domain From Grp1 In Complex With Inositol(1,3,4,5,6)pentakisphosphate Length = 129

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 35 KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
          K G  +KTW RRWFIL     ++F+     T    PRG IP+   L+++  ED   KP  
Sbjct: 11 KLGGRVKTWKRRWFILTDNCLYYFE----YTTDKEPRGIIPLEN-LSIREVEDP-RKPNC 64
Query: 95 FE 96
          FE
Sbjct: 65 FE 66

>pdb|2R0D|A Chain A, Crystal Structure Of Autoinhibited Form Of Grp1 Arf Gtpase Exchange Factor Length = 347

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
           K G  +KTW RRWFIL     ++F+     T    PRG IP+   L+++  ED   KP  
Sbjct: 221 KLGGRVKTWKRRWFILTDNCLYYFE----YTTDKEPRGIIPLEN-LSIREVEDP-RKPNC 274
Query: 95  FE 96
           FE
Sbjct: 275 FE 276

>pdb|1FHX|A Chain A, Structure Of The Pleckstrin Homology Domain From Grp1 In Complex With Inositol 1,3,4,5-Tetrakisphosphate Length = 129

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 35 KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
          K G  +KTW RRWFIL     ++F+     T    PRG IP+   L+++  ED   KP  
Sbjct: 11 KLGGRVKTWKRRWFILTDNCLYYFE----YTTDKEPRGIIPLEN-LSIREVEDP-RKPNC 64
Query: 95 FE 96
          FE
Sbjct: 65 FE 66

>pdb|2R09|A Chain A, Crystal Structure Of Autoinhibited Form Of Grp1 Arf Gtpase Exchange Factor Length = 347

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
           K G  +KTW RRWFIL     ++F+     T    PRG IP+   L+++  ED   KP  
Sbjct: 221 KLGGRVKTWKRRWFILTDNCLYYFE----YTTDKEPRGIIPLEN-LSIREVEDP-RKPNC 274
Query: 95  FE 96
           FE
Sbjct: 275 FE 276

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	144
1fao_A	126	Dual adaptor of phosphotyrosine and 3- phosphoinos	1e-19
1pls_A	113	Pleckstrin homology domain; phosphorylation; NMR {	8e-19
2dn6_A	115	KIAA0640 protein; PH domain, structural genomics,	1e-17
1eaz_A	125	Tandem PH domain containing protein-1; lipid-bindi	4e-17
1wgq_A	109	FYVE, rhogef and PH domain containing 6; ethanol d	1e-16
1wi1_A	126	Calcium-dependent activator protein for secretion,	2e-16
1v89_A	118	Hypothetical protein KIAA0053; pleckstrin homology	6e-16
1unq_A	125	RAC-alpha serine/threonine kinase; transferase, pl	6e-16
2d9y_A	117	Pleckstrin homology domain-containing protein fami	3e-15
1upq_A	123	PEPP1; PH domain, phosphoinositide binding, signal	6e-15
2dkp_A	128	Pleckstrin homology domain-containing family A mem	2e-14
2yry_A	122	Pleckstrin homology domain-containing family A mem	3e-14
3tfm_A	228	Myosin X; split PH domain, motor protein; 2.53A {R	3e-14
1v5p_A	126	Pleckstrin homology domain-containing, family A; T	5e-14
2i5f_A	109	Pleckstrin; PH domain, protein-inositol phosphate	5e-14
1v5u_A	117	SBF1, SET binding factor 1; MTMR5, the pleckstrin	5e-14
1x05_A	129	Pleckstrin; PH domain, structural genomics, NPPSFA	9e-14
1x1g_A	129	Pleckstrin 2; PH domain, structural genomics, rike	2e-13
1wg7_A	150	Dedicator of cytokinesis protein 9; pleckstrin hom	2e-13
3rcp_A	103	Pleckstrin homology domain-containing family A ME;	3e-13
3cxb_B	112	Pleckstrin homology domain-containing family M mem	5e-13
1u5d_A	108	SKAP55, SRC kinase-associated phosphoprotein of 55	5e-13
1u5f_A	148	SRC-associated adaptor protein; PH domain of SKAP-	1e-12
2cod_A	115	Centaurin-delta 1; ARF GAP and RHO GAP with ankyri	1e-12
2d9x_A	120	Oxysterol binding protein-related protein 11; PH d	2e-12
2rsg_A	94	Collagen type IV alpha-3-binding protein; pleckstr	2e-12
1fgy_A	127	GRP1; PH domain, signaling protein; HET: 4IP; 1.50	6e-12
2dhk_A	119	TBC1 domain family member 2; PH domain, paris-1, s	2e-10
2j59_M	168	RHO-GTPase activating protein 10; ARF, ARF1, ARFBD	2e-10
2cof_A	107	Protein KIAA1914; PH domain, structural genomics,	3e-10
1u5e_A	211	SRC-associated adaptor protein; novel dimerization	3e-10
2d9v_A	130	Pleckstrin homology domain-containing protein fami	4e-10
2y7b_A	134	Actin-binding protein anillin; cell cycle; 1.90A {	5e-10
1qqg_A	264	IRS-1, insulin receptor substrate 1; beta-sandwhic	7e-10
3aj4_A	112	Pleckstrin homology domain-containing family B ME;	3e-09
2ys3_A	137	UNC-112-related protein 2; PH domain, kindlin-3, s	4e-09
2da0_A	114	130-kDa phosphatidylinositol 4,5-biphosphate- depe	4e-09
4a6h_A	120	Phosphatidylinositol 4,5-bisphosphate-binding Pro	3e-08
1v88_A	130	Oxysterol binding protein-related protein 8; vesic	5e-08
2p0d_A	129	RHO GTPase-activating protein 9; protein-phosphoin	5e-08
1x1f_A	149	Signal-transducing adaptor protein 1; docking prot	5e-08
2lul_A	164	Tyrosine-protein kinase TEC; structural genomics,	1e-07
3a8n_A	279	TIAM-1, T-lymphoma invasion and metastasis-inducin	2e-07
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-07
3a8p_A	263	T-lymphoma invasion and metastasis-inducing protei	4e-07
2q13_A	385	DCC-interacting protein 13 alpha; APPL1, BAR domai	5e-07
3pp2_A	124	RHO GTPase-activating protein 27; PH domain, GTPas	8e-07
1wjm_A	123	Beta-spectrin III; PH domain, signal transduction,	9e-07
2coc_A	112	FYVE, rhogef and PH domain containing protein 3; s	2e-06
1dyn_A	125	Dynamin; signal transduction protein; 2.20A {Homo	4e-06
1btk_A	169	Bruton'S tyrosine kinase; transferase, PH domain,	3e-05
2dtc_A	126	RAL guanine nucleotide exchange factor ralgps1A; P	2e-04
4f7h_A	173	Fermitin family homolog 2; beta-barrel, membrane b	4e-04
2w2x_D	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	4e-04
2rlo_A	128	Centaurin-gamma 1; split PH domain, alternative sp	8e-04

>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A Length = 126

 Score = 77.8 bits (192), Expect = 1e-19
 Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 11/105 (10%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
           KQG  +KTW  RWF L + E  +FKD         P   + +  C  V+       +   
Sbjct: 26  KQGGLVKTWKTRWFTLHRNELKYFKDQM----SPEPIRILDLTECSAVQFDYS-QERVNC 80

Query: 95  FE---HSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESE 136
           F      R   T Y  A T  E  E I  +   + Q  + + + E
Sbjct: 81  FCLVFPFR---TFYLCAKTGVEADEWIKILRWKLSQIRKQLNQGE 122

>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 113

 Score = 75.5 bits (186), Expect = 8e-19
 Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 5/92 (5%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
           K+G    TW   W +L +    ++K   +    ++P+G IP+         +D   + F 
Sbjct: 13  KKGSVFNTWKPMWVVLLEDGIEFYKKKSD----NSPKGMIPLKGSTLTSPCQDFGKRMFV 68

Query: 95  FEHSRGGYTMYS-VADTEKEKGERINSIGRAI 125
           F+ +      +   A   +E+   +  I +AI
Sbjct: 69  FKITTTKQQDHFFQAAFLEERDAWVRDINKAI 100

>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 72.4 bits (178), Expect = 1e-17
 Identities = 23/94 (24%), Positives = 33/94 (35%), Gaps = 4/94 (4%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
           K+G   K W  RWF+LK     ++            +G I +     V+   D   K   
Sbjct: 16  KKGHRRKNWTERWFVLKPNIISYYVSED----LKDKKGDILLDENCCVESLPDKDGKKCL 71

Query: 95  FEHSRGGYTMYSVADTEKEKGERINSIGRAIVQH 128
           F       T    A  +K+K E I +I   I   
Sbjct: 72  FLVKCFDKTFEISASDKKKKQEWIQAIHSTIHLL 105

>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1 Length = 125

 Score = 71.3 bits (175), Expect = 4e-17
 Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 6/97 (6%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE--DVLNKP 92
           KQG  +K W RR+F L +    +FK          P   IP+     V+  +  D++ + 
Sbjct: 22  KQGAVMKNWKRRYFQLDENTIGYFKSELE----KEPLRVIPLKEVHKVQECKQSDIMMRD 77

Query: 93  FAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHS 129
             FE      T Y  AD+ +E    I ++  AIV   
Sbjct: 78  NLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQR 114

>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 Length = 109

 Score = 69.3 bits (170), Expect = 1e-16
 Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 6/98 (6%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
           +     K W   WF++K    + +  S +           P+    TV   +D  ++   
Sbjct: 16  RSKGSKKPWKHLWFVIKNKVLYTYAASED----VAALESQPLLGF-TVTLVKDENSESKV 70

Query: 95  FEHSRGGYTMYSV-ADTEKEKGERINSIGRAIVQHSRS 131
           F+    G   Y   AD        I++     V    S
Sbjct: 71  FQLLHKGMVFYVFKADDAHSTQRWIDAFQEGTVSGPSS 108

>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 126

 Score = 69.6 bits (170), Expect = 2e-16
 Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 3/101 (2%)

Query: 35  KQGDYI-KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPV--GTCLTVKCAEDVLNK 91
             G  + K W +R+F+L Q   + F       + + P+  + +   T         +   
Sbjct: 16  AIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGG 75

Query: 92  PFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSV 132
              F   + G T+   +D E+++   + ++ RA  Q  + V
Sbjct: 76  RAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPV 116

>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 118

 Score = 68.2 bits (167), Expect = 6e-16
 Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 13/100 (13%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA-EDVLNKPF 93
           KQ   +K W +R+F+L+  + +++KD  +    + P+G + +  C   + A        F
Sbjct: 16  KQRSIVKNWQQRYFVLRAQQLYYYKDEED----TKPQGCMYLPGCTIKEIATNPEEAGKF 71

Query: 94  AFE--------HSRGGYTMYSVADTEKEKGERINSIGRAI 125
            FE        +  G  +   +A ++ E  E +  + R  
Sbjct: 72  VFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVA 111

>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A Length = 125

 Score = 68.4 bits (167), Expect = 6e-16
 Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 7/116 (6%)

Query: 31  GPANKQGDYIKTWLRRWFILKQ-GEHFWFKDS-HNITRGSTPRGFIPVGTCLTVKCAEDV 88
           G  +K+G+YIKTW  R+F+LK  G    +K+   ++ +   P     V  C  +K     
Sbjct: 12  GWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPR 71

Query: 89  LN--KPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESEVVEYDS 142
            N       + +      +   +T +E+ E   +I            E E +++ S
Sbjct: 72  PNTFIIRCLQWTTVIERTFH-VETPEEREEWTTAIQTVA--DGLKKQEEEEMDFRS 124

>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 117

 Score = 66.3 bits (162), Expect = 3e-15
 Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 7/102 (6%)

Query: 35  KQG-DYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPV-GTCLTVKCAEDVLNKP 92
           KQ    +K W +RWF+L     F++KD     +  +  G IP+    +      D +++ 
Sbjct: 19  KQASSGVKQWNKRWFVLVDRCLFYYKDE----KEESILGSIPLLSFRVAAVQPSDNISRK 74

Query: 93  FAFEHSRGGY-TMYSVADTEKEKGERINSIGRAIVQHSRSVT 133
             F+    G  T +  A++ +E+   I ++G A    S   +
Sbjct: 75  HTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAARVQSGPSS 116

>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A* Length = 123

 Score = 65.5 bits (160), Expect = 6e-15
 Identities = 23/105 (21%), Positives = 39/105 (37%), Gaps = 7/105 (6%)

Query: 35  KQG-DYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPV-GTCLTVKCAEDVLNKP 92
           KQ    ++ W RRWF+L     F++KDS       +  G + +    +          + 
Sbjct: 19  KQDSSGLRLWKRRWFVLSGHCLFYYKDSRE----ESVLGSVLLPSYNIRPDGPGAPRGRR 74

Query: 93  FAFEHSRGGY-TMYSVADTEKEKGERINSIGRAIVQHSRSVTESE 136
           F F     G  T    ADT ++    + ++GRA         +  
Sbjct: 75  FTFTAEHPGMRTYVLAADTLEDLRGWLRALGRASRAEGDDYGQPR 119

>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens} Length = 128

 Score = 64.4 bits (157), Expect = 2e-14
 Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 7/100 (7%)

Query: 35  KQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPV-GTCLTVKCAEDVLNKP 92
           KQ    +K W +RWF+L     F+++D           G I +    + +  +ED +N+ 
Sbjct: 29  KQDSTGMKLWKKRWFVLSDLCLFYYRDEKE----EGILGSILLPSFQIALLTSEDHINRK 84

Query: 93  FAFEHSRGGY-TMYSVADTEKEKGERINSIGRAIVQHSRS 131
           +AF+ +     T Y   DT KE    + ++  A +  +  
Sbjct: 85  YAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAALVQTSG 124

>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 122

 Score = 63.6 bits (155), Expect = 3e-14
 Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 7/97 (7%)

Query: 35  KQG-DYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPV-GTCLTVKCAEDVLNKP 92
           KQ    +K W +RWF+L     F++KD     +  +  G IP+    +      D +++ 
Sbjct: 30  KQASSGVKQWNKRWFVLVDRCLFYYKDE----KEESILGSIPLLSFRVAAVQPSDNISRK 85

Query: 93  FAFEHSRGGY-TMYSVADTEKEKGERINSIGRAIVQH 128
             F+    G  T +  A++ +E+   I ++G A    
Sbjct: 86  HTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAARVQ 122

>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus} Length = 228

 Score = 65.8 bits (160), Expect = 3e-14
 Identities = 16/114 (14%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 35  KQGDY-----IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVL 89
             G        + W +RWF+L+Q +  +F++          +G + V +   +    D  
Sbjct: 66  NNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSE----EKLKGTVEVRSAKEI---IDNT 118

Query: 90  NKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESEVVEYDSK 143
           NK    +      T + +A++ ++  +  + + +      + + E    + + +
Sbjct: 119 NKENGIDIIMADRTFHLIAESPEDASQWFSVLSQVHSSTDQEIREMHDEQANPQ 172

>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 Length = 126

 Score = 63.4 bits (154), Expect = 5e-14
 Identities = 19/96 (19%), Positives = 40/96 (41%), Gaps = 5/96 (5%)

Query: 35  KQGDYIKTWLRRWFILKQGEH--FWFKDS-HNITRGSTPRGFIPVGTCLTVKCAEDVL-- 89
           +  +    +LRR+FIL    +   W+ D+  N+  G+   G + +     V  A      
Sbjct: 24  EDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKP 83

Query: 90  NKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAI 125
             PF F  +      +  A+ +K+  + + ++ +A 
Sbjct: 84  KTPFCFVINALSQRYFLQANDQKDLKDWVEALNQAS 119

>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A Length = 109

 Score = 62.8 bits (153), Expect = 5e-14
 Identities = 24/100 (24%), Positives = 36/100 (36%), Gaps = 15/100 (15%)

Query: 35  KQGDYIKTWLRRWFILKQGEH--FWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNK- 91
           KQG   K W  R FIL++      ++  +        P G I +  C+      +   + 
Sbjct: 15  KQGHRRKNWKVRKFILREDPAYLHYYDPAGA----EDPLGAIHLRGCVVTSVESNSNGRK 70

Query: 92  ---PFAFE---HSRGGYTMYSVADTEKEKGERINSIGRAI 125
                 FE        Y +   A T KE+ E I +I  A 
Sbjct: 71  SEEENLFEIITADEVHYFLQ--AATPKERTEWIKAIQMAS 108

>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1 Length = 117

 Score = 62.8 bits (153), Expect = 5e-14
 Identities = 18/112 (16%), Positives = 38/112 (33%), Gaps = 18/112 (16%)

Query: 31  GPANKQGDYIKTWLRRWFILKQGEH--FWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV 88
           G   K+G ++K W  RWF+L + +H   ++    +    +  +G I +     V      
Sbjct: 12  GILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMD----TECKGVIDLAEVEAVAPGTPT 67

Query: 89  L------NKPFAFE---HSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRS 131
           +      ++   F+     R        A       + ++ I   +     S
Sbjct: 68  IGAPKTVDEKAFFDVKTTRR---VYNFCAQDVPSAQQWVDRIQSCLSSGPSS 116

>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A Length = 129

 Score = 62.9 bits (153), Expect = 9e-14
 Identities = 24/104 (23%), Positives = 35/104 (33%), Gaps = 11/104 (10%)

Query: 35  KQGDYIKTWLRRWFILKQGEH--FWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNK- 91
           KQG   K W  R FIL++      ++  +        P G I +  C+      +   + 
Sbjct: 26  KQGHRRKNWKVRKFILREDPAYLHYYDPAG----AEDPLGAIHLRGCVVTSVESNSNGRK 81

Query: 92  ---PFAFEHSRGGYTMYS-VADTEKEKGERINSIGRAIVQHSRS 131
                 FE        Y   A T KE+ E I +I  A       
Sbjct: 82  SEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMASRTGKSG 125

>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 129

 Score = 61.8 bits (150), Expect = 2e-13
 Identities = 22/126 (17%), Positives = 39/126 (30%), Gaps = 13/126 (10%)

Query: 10  GQDPNPVDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGST 69
           G   +      +E        G   KQG   K W  R F+L++   F      +    + 
Sbjct: 1   GSSGSSGSLSTVELSGTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPS-KEENR 59

Query: 70  PRGFIPVGTCLTVKCAE-------DVLNKPFAFE---HSRGGYTMYSVADTEKEKGERIN 119
           P G   +   L     +           +   F+        Y +   A ++ E+ E I 
Sbjct: 60  PVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQ--ASSKAERAEWIE 117

Query: 120 SIGRAI 125
           +I +  
Sbjct: 118 AIKKLT 123

>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 150

 Score = 62.3 bits (151), Expect = 2e-13
 Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 11/112 (9%)

Query: 31  GPANKQGDYIKTWLRRWFILKQGEH-----FWFKDSHNITRGSTPRGFIPVGTCLTVKCA 85
              +     ++++ RR+F L Q         ++KD         P+G I + +C+ V   
Sbjct: 28  NMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKE---PKGSIFLDSCMGVVQN 84

Query: 86  EDVLNKPFAFE-HSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESE 136
                + FAFE   +   +    AD+E E  E I  + + +  +  +  + +
Sbjct: 85  NK--VRRFAFELKMQDKSSYLLAADSEVEMEEWITILNKILQLNFEAAMQEK 134

>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A Length = 103

 Score = 60.6 bits (147), Expect = 3e-13
 Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 5/101 (4%)

Query: 31  GPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLN 90
           G   K  +Y+  W  RWF+L  G   ++            +G I +  C     + D  N
Sbjct: 3   GVLYKWTNYLTGWQPRWFVLDNGILSYYDSQD--DVCKGSKGSIKMAVCEIKVHSAD--N 58

Query: 91  KPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRS 131
                    G    Y  A    E+   + ++G +    + +
Sbjct: 59  TRMELIIP-GEQHFYMKAVNAAERQRWLVALGSSKASLTDT 98

>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B Length = 112

 Score = 60.6 bits (147), Expect = 5e-13
 Identities = 15/90 (16%), Positives = 33/90 (36%), Gaps = 6/90 (6%)

Query: 41  KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV-LNKPFAFEHSR 99
           + W   + +L  G  + + D  +      P   + +G      C      ++P AF+   
Sbjct: 18  EHWKTCFVVLSNGILYQYPDRTD----VIPLLSVNMGGEQCGGCRRANTTDRPHAFQVIL 73

Query: 100 GGYTMYS-VADTEKEKGERINSIGRAIVQH 128
                    A++E E  E +  + +A+ + 
Sbjct: 74  SDRPCLELSAESEAEMAEWMQHLCQAVSKG 103

>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1 Length = 108

 Score = 60.1 bits (146), Expect = 5e-13
 Identities = 16/102 (15%), Positives = 34/102 (33%), Gaps = 11/102 (10%)

Query: 31  GPANKQGD----YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE 86
           G   K+      +   W +RW ++ +G  +++ +         P+G   +          
Sbjct: 7   GYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEK----SKQPKGTFLIKGYSVRMAPH 62

Query: 87  --DVLNKPFAFE-HSRGGYTMYSVADTEKEKGERINSIGRAI 125
                 K   FE  S+   T    A +  E  + ++ I   +
Sbjct: 63  LRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQISFLL 104

>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A Length = 148

 Score = 60.3 bits (146), Expect = 1e-12
 Identities = 12/105 (11%), Positives = 27/105 (25%), Gaps = 7/105 (6%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLN--KP 92
                   W +RW  L +   +++    +       +G   +             +  K 
Sbjct: 29  DHSFLGFEWQKRWCALSKTVFYYYGSDKD----KQQKGEFAIDGYDVRMNNTLRKDGKKD 84

Query: 93  FAFEHSRGGY-TMYSVADTEKEKGERINSIGRAIVQHSRSVTESE 136
             FE            A + K+  E +  +   +      V   +
Sbjct: 85  CCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQDLGSDVIPED 129

>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 115

 Score = 59.3 bits (144), Expect = 1e-12
 Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 16/101 (15%)

Query: 35  KQG-DYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPF 93
           K      + + +RW         ++ +          +G IP+    TV+          
Sbjct: 16  KLSPQGKRMFQKRWVKFDGLSISYYNNEKE----MYSKGIIPLSAISTVRV-----QGDN 66

Query: 94  AFE---HSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRS 131
            FE     R   T     + E+E+ + I+ +  A+   S +
Sbjct: 67  KFEVVTTQR---TFVFRVEKEEERNDWISILLNALKSQSLT 104

>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 120

 Score = 59.1 bits (143), Expect = 2e-12
 Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 9/108 (8%)

Query: 31  GPANKQGDYIKTWLRRWFILKQGEH--FWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV 88
           G   K  + +  W  R+F+L        +F +  +  R   PRG + +   +     ED 
Sbjct: 12  GYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQS--RNQKPRGTLQLAGAVISPSDED- 68

Query: 89  LNKPFAFE-HSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTES 135
                 F  ++  G      A   KE+   ++ +      H+ ++ ++
Sbjct: 69  ---SHTFTVNAASGEQYKLRATDAKERQHWVSRLQICTQHHTEAIGKN 113

>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens} Length = 94

 Score = 58.2 bits (141), Expect = 2e-12
 Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 6/95 (6%)

Query: 31  GPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLN 90
           G  +K  +YI  W  RW +LK     ++K           RG I +   +      D   
Sbjct: 5   GVLSKWTNYIHGWQDRWVVLKNNALSYYKSED--ETEYGCRGSICLSKAVITPHDFD--- 59

Query: 91  KPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAI 125
               F+ S      Y  A     + + I++I +  
Sbjct: 60  -ECRFDISVNDSVWYLRAQDPDHRQQWIDAIEQHK 93

>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A* Length = 127

 Score = 58.1 bits (140), Expect = 6e-12
 Identities = 28/117 (23%), Positives = 42/117 (35%), Gaps = 28/117 (23%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
           K G  +KTW RRWFIL     ++F+ + +      PRG IP+      +  +    KP  
Sbjct: 13  KLGGRVKTWKRRWFILTDNCLYYFEYTTD----KEPRGIIPLENLSIREVLDP--RKPNC 66

Query: 95  FE----------------------HSRGGYTMYSVADTEKEKGERINSIGRAIVQHS 129
           FE                                 A + +EK E + SI  +I +  
Sbjct: 67  FELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDP 123

>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119

 Score = 54.0 bits (130), Expect = 2e-10
 Identities = 14/101 (13%), Positives = 33/101 (32%), Gaps = 11/101 (10%)

Query: 35  KQG--DYIKTWLRRWFILKQGEH--FWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLN 90
           K G    I+ W  RWF   + +   ++ + + +    + P   I + + +          
Sbjct: 16  KFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQD----ANPLDSIDLSSAVFDC---KADA 68

Query: 91  KPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRS 131
           +   FE       +   A T++     +  +     +   S
Sbjct: 69  EEGIFEIKTPSRVITLKAATKQAMLYWLQQLQMKRWEFHNS 109

>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A Length = 168

 Score = 54.8 bits (131), Expect = 2e-10
 Identities = 15/102 (14%), Positives = 33/102 (32%), Gaps = 1/102 (0%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
           + G  I+ W + + +L+    + +KD    T  S     I V  C  +  +     +   
Sbjct: 21  RVGGSIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNAC-LIDISYSETKRKNV 79

Query: 95  FEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESE 136
           F  +         A+   +    I +I  +   +      + 
Sbjct: 80  FRLTTSDCECLFQAEDRDDMLAWIKTIQESSNLNEEDTGVTN 121

>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 107

 Score = 53.3 bits (128), Expect = 3e-10
 Identities = 14/99 (14%), Positives = 31/99 (31%), Gaps = 8/99 (8%)

Query: 34  NKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPF 93
           N   +    W  RW  ++     +++D     R    +  + +  C  V       +  +
Sbjct: 15  NVLVN--SQWKSRWCSVRDNHLHFYQDR---NRSKVAQQPLSLVGCEVVPDPSP--DHLY 67

Query: 94  AFEHSRGGYTMYS-VADTEKEKGERINSIGRAIVQHSRS 131
           +F     G  +    A + +E G  +  +         S
Sbjct: 68  SFRILHKGEELAKLEAKSSEEMGHWLGLLLSESGSGPSS 106

>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A Length = 211

 Score = 55.1 bits (132), Expect = 3e-10
 Identities = 11/94 (11%), Positives = 24/94 (25%), Gaps = 7/94 (7%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE--DVLNKP 92
                   W +RW  L +   +++    +       +G   +                K 
Sbjct: 118 DHSFLGFEWQKRWCALSKTVFYYYGSDKD----KQQKGEFAIDGYDVRMNNTLRKDGKKD 173

Query: 93  FAFEHSRGGY-TMYSVADTEKEKGERINSIGRAI 125
             FE            A + K+  E +  +   +
Sbjct: 174 CCFEICAPDKRIYQFTAASPKDAEEWVQQLKFIL 207

>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus} Length = 130

 Score = 53.1 bits (127), Expect = 4e-10
 Identities = 17/114 (14%), Positives = 37/114 (32%), Gaps = 13/114 (11%)

Query: 31  GPANKQGDYIKTWLRRWFILKQ-GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVL 89
           G   +Q   ++ W R WF L   G   ++ D     +    R  I       +K  ++  
Sbjct: 12  GWLWRQSSILRRWKRNWFALWLDGTLGYYHDET--AQDEEDRVVIHFN-VRDIKVGQECQ 68

Query: 90  --------NKPFAFE-HSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTE 134
                   ++      + R G  ++  A+T  +      ++  A    + +   
Sbjct: 69  DVQPPEGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANSTPAPAGAT 122

>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens} Length = 134

 Score = 53.1 bits (127), Expect = 5e-10
 Identities = 16/119 (13%), Positives = 36/119 (30%), Gaps = 24/119 (20%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA---EDVLNK 91
           +       W RRW +L      ++    +  +   P G I +  C + +      +   +
Sbjct: 15  EDVSGFGAWHRRWCVLSGNCISYWTYPDD-EKRKNPIGRINLANCTSRQIEPANREFCAR 73

Query: 92  PFAFE--------------------HSRGGYTMYSVADTEKEKGERINSIGRAIVQHSR 130
              FE                     +      +  ADT++E+   +  + + +V    
Sbjct: 74  RNTFELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLVDIRL 132

>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A* Length = 264

 Score = 54.5 bits (130), Expect = 7e-10
 Identities = 18/127 (14%), Positives = 39/127 (30%), Gaps = 11/127 (8%)

Query: 27  PGAIGPANKQG--DYIKTWLRRWFILKQGE--------HFWFKDSHNITRGSTPRGFIPV 76
                   K G     K+  +R+F+L+            ++  +     + S P+  IP+
Sbjct: 4   SDGFSDVRKVGYLRKPKSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPL 63

Query: 77  GTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESE 136
            +C  +    D  NK                AD+E E+     ++ +   +       + 
Sbjct: 64  ESCFNINKRADSKNK-HLVALYTRDEHFAIAADSEAEQDSWYQALLQLHNRAKGHHDGAA 122

Query: 137 VVEYDSK 143
            +     
Sbjct: 123 ALGAGGG 129

>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A Length = 112

 Score = 50.7 bits (121), Expect = 3e-09
 Identities = 15/105 (14%), Positives = 36/105 (34%), Gaps = 15/105 (14%)

Query: 31  GPANKQGDYIKTWLRRWFILKQ-GEHFWFKDSHNITRGSTPRGFIPVGT-CLTVKCAEDV 88
           G   +Q   +K W + WF L   G   ++ D             + +   C+ ++  ++ 
Sbjct: 9   GWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQT----RQNIEDKVHMPMDCINIRTGQEC 64

Query: 89  --------LNKPFAFE-HSRGGYTMYSVADTEKEKGERINSIGRA 124
                    +K    +   R G T+   A++  +      ++  +
Sbjct: 65  RDTQPPDGKSKDCMLQIVCRDGKTISLCAESTDDCLAWKFTLQDS 109

>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 137

 Score = 50.8 bits (121), Expect = 4e-09
 Identities = 17/115 (14%), Positives = 36/115 (31%), Gaps = 9/115 (7%)

Query: 34  NKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPF 93
             +   +K + + W + K+    ++K          P   + +  C  V    +V  + F
Sbjct: 19  RPRKLTLKGYRQHWVVFKETTLSYYKSQDEA--PGDPIQQLNLKGC-EVVPDVNVSGQKF 75

Query: 94  AFEH----SRGGYTMYSVADTEKEKGERINSIGRAIVQHSR--SVTESEVVEYDS 142
             +       G   +Y     E++    +     A    +   S   SEV    +
Sbjct: 76  CIKLLVPSPEGMSEIYLRCQDEQQYARWMAGCRLASKGRTMADSSYTSEVQAILA 130

>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114

 Score = 50.2 bits (120), Expect = 4e-09
 Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 10/92 (10%)

Query: 35  KQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPF 93
           K+ D   K W RR   +K G              +     + + TC     AE       
Sbjct: 18  KKSDGIRKVWQRRKCSVKNGILTISH-----ATSNRQPAKLNLLTCQVKPNAE----DKK 68

Query: 94  AFEHSRGGYTMYSVADTEKEKGERINSIGRAI 125
           +F+      T +  A+ E++    I+ +  + 
Sbjct: 69  SFDLISHNRTYHFQAEDEQDYVAWISVLTNSK 100

>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A Length = 120

 Score = 48.1 bits (114), Expect = 3e-08
 Identities = 13/113 (11%), Positives = 37/113 (32%), Gaps = 16/113 (14%)

Query: 31  GPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCL-------TVK 83
           G   ++  ++K++ + +++L       FK +    +   P   + +  C           
Sbjct: 10  GFLERRSKFLKSYSKGYYVLTPNFLHEFKTADR-KKDLVPVMSLALSECTVTEHSRKNST 68

Query: 84  CAEDVLNKPFAFE-------HSRGGYTMYSVADTEKEKGERINSIGRAIVQHS 129
            + +       F          R G+     AD+ +      +++ + +   S
Sbjct: 69  SSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNL-KILTSTS 120

>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 130

 Score = 47.8 bits (113), Expect = 5e-08
 Identities = 15/92 (16%), Positives = 28/92 (30%), Gaps = 8/92 (8%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
           K    +K+W + W +LK G    +K   N        G + +  C  ++         F 
Sbjct: 15  KIRGTLKSWTKLWCVLKPGVLLIYKTQKN----GQWVGTVLLNACEIIERPSK--KDGFC 68

Query: 95  FE--HSRGGYTMYSVADTEKEKGERINSIGRA 124
           F+  H              +  G     +  +
Sbjct: 69  FKLFHPLEQSIWAVKGPKGEAVGSITQPLPSS 100

>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A* Length = 129

 Score = 47.6 bits (113), Expect = 5e-08
 Identities = 13/98 (13%), Positives = 30/98 (30%), Gaps = 9/98 (9%)

Query: 41  KTWLRRWFILKQGEHFWFKDSHNITR-------GSTPRGFIPVGTCLTVKCAEDVLNKPF 93
           K W   W +L      ++++             GS P   + +     +     + ++  
Sbjct: 32  KNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGA-ALAHGRHLSSRRN 90

Query: 94  AFE-HSRGGYTMYSVADTEKEKGERINSIGRAIVQHSR 130
                +  G+     +D E E      ++   I +  R
Sbjct: 91  VLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERLVR 128

>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 149

 Score = 48.2 bits (114), Expect = 5e-08
 Identities = 7/91 (7%), Positives = 20/91 (21%), Gaps = 4/91 (4%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
            +    + +   W  L+    F++ D  +          + +     +            
Sbjct: 26  IKRSGYREYEHYWTELRGTTLFFYTDKKS----IIYVDKLDIVDLTCLTEQNSTEKNCAK 81

Query: 95  FEHSRGGYTMYSVADTEKEKGERINSIGRAI 125
           F        +    +  +   E    I    
Sbjct: 82  FTLVLPKEEVQLKTENTESGEEWRGFILTVT 112

>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens} Length = 164

 Score = 47.4 bits (112), Expect = 1e-07
 Identities = 14/102 (13%), Positives = 35/102 (34%), Gaps = 8/102 (7%)

Query: 34  NKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKP- 92
            K+      +  R F+L +    +++           +GFI V     V+  ++      
Sbjct: 27  QKKKTSPLNYKERLFVLTKSMLTYYEGRAE---KKYRKGFIDVSKIKCVEIVKNDDGVIP 83

Query: 93  ----FAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSR 130
               + F+      T+Y  A + + +   +  +   I  ++ 
Sbjct: 84  CQNKYPFQVVHDANTLYIFAPSPQSRDLWVKKLKEEIKNNNN 125

>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus} Length = 279

 Score = 47.6 bits (112), Expect = 2e-07
 Identities = 20/119 (16%), Positives = 37/119 (31%), Gaps = 9/119 (7%)

Query: 16  VDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHN--ITRGSTPRGF 73
           +  K      +   +  A +     + W   W  LK    F+++      I   S P+  
Sbjct: 17  LAVKNFLVHKKNKKVESATR-----RKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHA 71

Query: 74  IPVGTCLTVKCAEDVLNKPFAFE-HSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRS 131
           + V   + V+   +   K F F   +  G        ++ E    I +I  A       
Sbjct: 72  VWVENSI-VQAVPEHPKKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACAAAVAR 129

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 47.4 bits (113), Expect = 2e-07
 Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 9/118 (7%)

Query: 31  GPANKQGDYIKTWLRRWFILKQ-GEHFWFKDSHN-ITRGSTPRGFIPVGTCLTVKCAEDV 88
           G  +K+G+YIKTW  R+F+LK  G    +K+    + +   P     V  C  +K     
Sbjct: 10  GWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERP- 68

Query: 89  LNKPFAFEHSRGGYTMYSV----ADTEKEKGERINSIGRAIVQHSRSVTESEVVEYDS 142
             +P  F      +T         +T +E+ E   +I        +           S
Sbjct: 69  --RPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKKQAAAEMDFRSGS 124

>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A Length = 263

 Score = 46.9 bits (110), Expect = 4e-07
 Identities = 15/99 (15%), Positives = 31/99 (31%), Gaps = 4/99 (4%)

Query: 41  KTWLRRWFILKQGEHFWFKDSHNITRG--STPRGFIPVGTCLTVKCAEDVLNKPFAFE-H 97
           + W + W  LK     +++     +    S PR  +     + V+   +   K   F   
Sbjct: 37  RKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAEDSI-VQSVPEHPKKEHVFCLS 95

Query: 98  SRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESE 136
           +  G      A ++ +    + +I  A           E
Sbjct: 96  NSCGDVYLFQATSQTDLENWVTAIHSACASLFAKKHGKE 134

>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A Length = 385

 Score = 46.9 bits (110), Expect = 5e-07
 Identities = 19/105 (18%), Positives = 36/105 (34%), Gaps = 9/105 (8%)

Query: 34  NKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPF 93
           NK G    TW R+++  + G                    + +  C  +    D  ++ +
Sbjct: 288 NKTGLVSSTWDRQFYFTQGGNLMSQARGDV-----AGGLAMDIDNCSVMAV--DCEDRRY 340

Query: 94  AFE--HSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESE 136
            F+     G  +    A+++K+  E I +I     Q   S    E
Sbjct: 341 CFQITSFDGKKSSILQAESKKDHEEWICTINNISKQIYLSENPEE 385

>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens} Length = 124

 Score = 44.5 bits (105), Expect = 8e-07
 Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 9/96 (9%)

Query: 41  KTWLRRWFILKQGEHFWFKDSHNITRG--------STPRGFIPVGTCLTVKCAEDVLNKP 92
           K W   W +L+ G   +FKDS     G        STP   + +         +D  ++ 
Sbjct: 29  KHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAPKDKSSRK 88

Query: 93  FAFE-HSRGGYTMYSVADTEKEKGERINSIGRAIVQ 127
              E  SR G       D+E        +I + I +
Sbjct: 89  NVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGIQE 124

>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 123

 Score = 44.2 bits (104), Expect = 9e-07
 Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 2/93 (2%)

Query: 41  KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCL-TVKCAEDVLNKPFAFE-HS 98
           ++W   + +L++G   ++KD+   + G    G +PV         A D   +   F+   
Sbjct: 30  RSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFDYRKRKHVFKLGL 89

Query: 99  RGGYTMYSVADTEKEKGERINSIGRAIVQHSRS 131
           + G      A  E E    +  +  AI     S
Sbjct: 90  QDGKEYLFQAKDEAEMSSWLRVVNAAIASGPSS 122

>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 112

 Score = 43.4 bits (102), Expect = 2e-06
 Identities = 13/88 (14%), Positives = 31/88 (35%), Gaps = 8/88 (9%)

Query: 41  KTWLRRWFILKQGEH---FWFKDSHNITRGSTPRGFIPV-GTCLTVKCAEDVLNKPFAFE 96
           +TW   W  +   +         S +          IP+    L+V   E+ L+    ++
Sbjct: 21  ETWSEVWAAIPMSDPQVLHLQGGSQD----GRLPRTIPLPSCKLSVPDPEERLDSGHVWK 76

Query: 97  HSRGGYTMYSVADTEKEKGERINSIGRA 124
                 + Y  A + + + + + ++  A
Sbjct: 77  LQWAKQSWYLSASSAELQQQWLETLSTA 104

>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A Length = 125

 Score = 42.7 bits (100), Expect = 4e-06
 Identities = 17/109 (15%), Positives = 32/109 (29%), Gaps = 13/109 (11%)

Query: 35  KQGDYIKTWLRR-WFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPF 93
                +K   +  WF+L      W+KD          +  + V         +  ++   
Sbjct: 21  NNIGIMKGGSKEYWFVLTAENLSWYKDD----EEKEKKYMLSVDNLKLRDVEKGFMSSKH 76

Query: 94  AFE-HSRGGYTMYS-------VADTEKEKGERINSIGRAIVQHSRSVTE 134
            F   +     +Y          +T++E      S  RA V   R   +
Sbjct: 77  IFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRAGVYPERVGDK 125

>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A* Length = 169

 Score = 41.1 bits (95), Expect = 3e-05
 Identities = 19/137 (13%), Positives = 43/137 (31%), Gaps = 26/137 (18%)

Query: 34  NKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLN--- 90
            K+      + +  F+L   +  +++      R  + +G I V     V+      N   
Sbjct: 15  QKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPP 74

Query: 91  ----------------------KPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQH 128
                                  P+ F+       +Y  + TE+ +   I+ +   I  +
Sbjct: 75  ERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIRYN 134

Query: 129 SRSVTESEVVEY-DSKW 144
           S  V +     + D ++
Sbjct: 135 SDLVQKYHPCFWIDGQY 151

>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus} Length = 126

 Score = 38.1 bits (88), Expect = 2e-04
 Identities = 14/100 (14%), Positives = 27/100 (27%), Gaps = 9/100 (9%)

Query: 40  IKTWLRRWFILKQGEHFWFKDSHNITRG-----STPRGFIPVGTCLTVKCAEDVLNKPFA 94
           + +W R W +L      ++              STP   + +     V+  +D    P  
Sbjct: 21  LSSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSI-VGWMVQLPDDP-EHPDI 78

Query: 95  FE--HSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSV 132
           F+  +   G        +          +  A       V
Sbjct: 79  FQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSSRPQV 118

>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A* Length = 173

 Score = 37.8 bits (87), Expect = 4e-04
 Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 15/118 (12%)

Query: 34  NKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPF 93
             +   +K + + W   K      +K         TP   + +  C  V    ++  + F
Sbjct: 57  KPKKLTLKGYKQYWCTFKDTSISCYKSKEES--SGTPAHQMNLRGC-EVTPDVNISGQKF 113

Query: 94  AFE----HSRGGYTMYSVADTEKEKGE-----RINSIGRAIVQHSRSVTESEVVEYDS 142
             +     + G   ++   D EK+        R+ S G+ +   S      EV    S
Sbjct: 114 NIKLLIPVAEGMNEIWLRCDNEKQYAHWMAACRLASKGKTMADSS---YNLEVQNILS 168

>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A Length = 124

 Score = 37.1 bits (85), Expect = 4e-04
 Identities = 19/98 (19%), Positives = 32/98 (32%), Gaps = 8/98 (8%)

Query: 41  KTWLRRWFILKQGEHFWFKDSH-----NITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAF 95
           + W R +  +   +  +  D       +   GS  RG + + T   VK  +    K F F
Sbjct: 26  QKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVKAPQGKNQKSFVF 85

Query: 96  ---EHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSR 130
                 +G   +    D  +E  E   SI     +   
Sbjct: 86  ILEPKQQGDPPVEFATDKVEELFEWFQSIREITWKIDT 123

>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens} Length = 128

 Score = 36.4 bits (83), Expect = 8e-04
 Identities = 17/113 (15%), Positives = 31/113 (27%), Gaps = 23/113 (20%)

Query: 35  KQGD--YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVK--------- 83
           K+      K W +++  L       +  S N    ST    + +    TVK         
Sbjct: 12  KRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRT-TVKVPGKRPPRA 70

Query: 84  ---CAEDVLNKPFAFEHSRGGYTMYSV--------ADTEKEKGERINSIGRAI 125
                          E     + + S         A + +E+   + +I   I
Sbjct: 71  ISAFGPSASGSAGQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQI 123

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	144
1pls_A	113	Pleckstrin homology domain; phosphorylation; NMR {	99.92
1wi1_A	126	Calcium-dependent activator protein for secretion,	99.92
1x1f_A	149	Signal-transducing adaptor protein 1; docking prot	99.92
1fao_A	126	Dual adaptor of phosphotyrosine and 3- phosphoinos	99.91
1wgq_A	109	FYVE, rhogef and PH domain containing 6; ethanol d	99.91
2dn6_A	115	KIAA0640 protein; PH domain, structural genomics,	99.91
1v89_A	118	Hypothetical protein KIAA0053; pleckstrin homology	99.91
1v88_A	130	Oxysterol binding protein-related protein 8; vesic	99.91
1v5u_A	117	SBF1, SET binding factor 1; MTMR5, the pleckstrin	99.91
1fgy_A	127	GRP1; PH domain, signaling protein; HET: 4IP; 1.50	99.91
2dhk_A	119	TBC1 domain family member 2; PH domain, paris-1, s	99.9
2cod_A	115	Centaurin-delta 1; ARF GAP and RHO GAP with ankyri	99.9
1dyn_A	125	Dynamin; signal transduction protein; 2.20A {Homo	99.9
2rsg_A	94	Collagen type IV alpha-3-binding protein; pleckstr	99.9
1v5p_A	126	Pleckstrin homology domain-containing, family A; T	99.9
2i5f_A	109	Pleckstrin; PH domain, protein-inositol phosphate	99.9
1x05_A	129	Pleckstrin; PH domain, structural genomics, NPPSFA	99.9
1eaz_A	125	Tandem PH domain containing protein-1; lipid-bindi	99.89
2coc_A	112	FYVE, rhogef and PH domain containing protein 3; s	99.89
2w2x_D	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.89
3aj4_A	112	Pleckstrin homology domain-containing family B ME;	99.89
1btk_A	169	Bruton'S tyrosine kinase; transferase, PH domain,	99.89
1u5d_A	108	SKAP55, SRC kinase-associated phosphoprotein of 55	99.89
1x1g_A	129	Pleckstrin 2; PH domain, structural genomics, rike	99.89
2dkp_A	128	Pleckstrin homology domain-containing family A mem	99.89
2d9v_A	130	Pleckstrin homology domain-containing protein fami	99.88
3cxb_B	112	Pleckstrin homology domain-containing family M mem	99.88
4a6h_A	120	Phosphatidylinositol 4,5-bisphosphate-binding Pro	99.88
1u5f_A	148	SRC-associated adaptor protein; PH domain of SKAP-	99.88
2d9y_A	117	Pleckstrin homology domain-containing protein fami	99.88
3rcp_A	103	Pleckstrin homology domain-containing family A ME;	99.88
2lul_A	164	Tyrosine-protein kinase TEC; structural genomics,	99.88
1upq_A	123	PEPP1; PH domain, phosphoinositide binding, signal	99.88
2da0_A	114	130-kDa phosphatidylinositol 4,5-biphosphate- depe	99.88
1wg7_A	150	Dedicator of cytokinesis protein 9; pleckstrin hom	99.87
2y7b_A	134	Actin-binding protein anillin; cell cycle; 1.90A {	99.87
2yry_A	122	Pleckstrin homology domain-containing family A mem	99.87
2p0d_A	129	RHO GTPase-activating protein 9; protein-phosphoin	99.87
2d9x_A	120	Oxysterol binding protein-related protein 11; PH d	99.87
1unq_A	125	RAC-alpha serine/threonine kinase; transferase, pl	99.86
1u5e_A	211	SRC-associated adaptor protein; novel dimerization	99.86
1wjm_A	123	Beta-spectrin III; PH domain, signal transduction,	99.85
2cof_A	107	Protein KIAA1914; PH domain, structural genomics,	99.85
1btn_A	106	Beta-spectrin; signal transduction protein; HET: I	99.84
2j59_M	168	RHO-GTPase activating protein 10; ARF, ARF1, ARFBD	99.84
3tfm_A	228	Myosin X; split PH domain, motor protein; 2.53A {R	99.84
2r09_A	347	Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-ph	99.83
3lju_X	386	ARF-GAP with dual PH domain-containing protein 1;	99.83
2rlo_A	128	Centaurin-gamma 1; split PH domain, alternative sp	99.82
1qqg_A	264	IRS-1, insulin receptor substrate 1; beta-sandwhic	99.82
3a8p_A	263	T-lymphoma invasion and metastasis-inducing protei	99.81
1dro_A	122	Beta-spectrin; cytoskeleton; NMR {Drosophila melan	99.81
3pp2_A	124	RHO GTPase-activating protein 27; PH domain, GTPas	99.8
2dtc_A	126	RAL guanine nucleotide exchange factor ralgps1A; P	99.8
2q13_A	385	DCC-interacting protein 13 alpha; APPL1, BAR domai	99.78
3lju_X	386	ARF-GAP with dual PH domain-containing protein 1;	99.78
2rov_A	117	RHO-associated protein kinase 2; ATP-binding, coil	99.76
3tca_A	291	Amyloid beta A4 precursor protein-binding family 1	99.76
4h8s_A	407	DCC-interacting protein 13-beta; BAR domain, pleck	99.75
2fjl_A	150	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.74
2d9w_A	127	Docking protein 2; PH domain, structural genomics,	99.73
2ys3_A	137	UNC-112-related protein 2; PH domain, kindlin-3, s	99.72
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.57
3hk0_A	256	Growth factor receptor-bound protein 10; GRB10, RA	99.57
3a8n_A	279	TIAM-1, T-lymphoma invasion and metastasis-inducin	99.54
4f7h_A	173	Fermitin family homolog 2; beta-barrel, membrane b	99.54
4bbk_A	165	Kindlin-1, fermitin family homolog 1; PH domain, c	99.51
4gmv_A	281	RAS-associated and pleckstrin homology domains-CO	99.5
2coa_A	125	Protein kinase C, D2 type; protein kinase D2, PH d	99.49
1w1g_A	151	HPDK1, 3-phosphoinositide dependent protein kinase	99.47
2d9z_A	129	Protein kinase C, NU type; PH domain, structural g	99.43
1v61_A	132	RAC/CDC42 guanine nucleotide exchange factor (GEF)	99.11
1zc3_B	113	Exocyst complex protein EXO84; exocytosis, small G	98.91
1v5m_A	136	SH2 and PH domain-containing adapter protein APS;	98.88
3ml4_A	224	Protein DOK-7; tyrosine phosphorylation, adapter p	98.74
3qwm_A	140	Iqsec1, IQ motif and SEC7 domain-containing protei	98.64
3tfm_A	228	Myosin X; split PH domain, motor protein; 2.53A {R	98.54
3mpx_A	434	FYVE, rhogef and PH domain-containing protein 5; s	98.33
1mai_A	131	Phospholipase C delta-1; pleckstrin, inositol tris	98.32
1dbh_A	354	Protein (human SOS 1); guanine nucleotide exchange	98.32
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	98.28
2dfk_A	402	Collybistin II; DH domain, PH domain, cell cycle;	98.27
2vrw_B	406	P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP	98.19
3ky9_A	587	Proto-oncogene VAV; calponin homology domain, DBL	98.14
2lg1_A	185	A-kinase anchor protein 13; metal binding protein;	98.1
3zvr_A	772	Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mito	98.05
3t06_A	418	PDZ-rhogef, RHO guanine nucleotide exchange factor	97.97
1xcg_A	368	PDZ-rhogef, RHO guanine nucleotide exchange factor	97.96
2z0q_A	346	XPLN, RHO guanine nucleotide exchange factor 3; DH	97.92
1kz7_A	353	Guanine nucleotide exchange factor DBS; guanine nu	97.91
1nty_A	311	Triple functional domain protein; DBL, pleckstrin,	97.91
3p6a_A	377	RHO guanine nucleotide exchange factor 1; regulati	97.9
1txd_A	385	RHO guanine nucleotide exchange factor 12; helical	97.85
3jzy_A	510	Intersectin 2; C2 domain, structural genomics cons	97.84
3odw_A	536	RHO guanine nucleotide exchange factor 1; regulati	97.84
2rgn_B	354	RHOA/RAC/CDC42 exchange factor; heterotrimeric G-p	97.7
3ksy_A	1049	SOS-1, SON of sevenless homolog 1; RAS, RAS activa	97.68
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	97.47
1foe_A	377	T-lymphoma invasion and metastasis inducing protei	97.35
2adz_A	178	Alpha-1-syntrophin; protein binding; NMR {Mus musc	96.53
1z87_A	263	Alpha-1-syntrophin; protein binding; NMR {Mus musc	96.52
1fho_A	119	UNC-89; pleckstrin homology domain, electrostatics	95.96
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	92.54
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	92.14
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	90.53
3a58_A	320	Exocyst complex component SEC3; protein complex, P	89.36
3a98_B	203	Engulfment and cell motility protein 1; protein-pr	86.19
3hie_A	171	Protein PSL1, exocyst complex component SEC3; PH d	86.18
2rrf_A	141	Zinc finger FYVE domain-containing protein 21; zfy	84.77

>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.92  E-value=9.4e-24  Score=137.44  Aligned_cols=102  Identities=20%  Similarity=0.322  Sum_probs=89.3

Q ss_pred             cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC-eE
Q 035610           25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG-YT  103 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~-~~  103 (144)
                      .++.++|||.|+|+..+.|++|||+|.++.|+||+++.    +..+.+.|+|.++..+....+...++++|.|.+++ +.
T Consensus         3 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~r~   78 (113)
T 1pls_A            3 PKRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKS----DNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQD   78 (113)
T ss_dssp             CCCSEEEEEEEESSSSSCCEEEEEEEETTEEEEESSTT----CSSCSEEEESSSCCEESSCCSSCCSSSEEEEEETTTEE
T ss_pred             CCCcEEEEEEEeCCCCCCceEEEEEEECCEEEEEeCCC----CCCcceEEEcCCCEEEEecCCCCCCccEEEEEcCCCCE
Confidence            35779999999998889999999999999999999987    78899999999987765344445678999999876 89


Q ss_pred             EEEEcCCHHHHHHHHHHHHHHHHhcCC
Q 035610          104 MYSVADTEKEKGERINSIGRAIVQHSR  130 (144)
Q Consensus       104 ~~l~a~s~~e~~~Wi~al~~ai~~~~~  130 (144)
                      |+|+|+|.+++++|+.+|+.++.....
T Consensus        79 ~~l~a~s~~e~~~Wi~ai~~~~~~~~~  105 (113)
T 1pls_A           79 HFFQAAFLEERDAWVRDINKAIKCIEG  105 (113)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEECCCHHHHHHHHHHHHHHHhccch
Confidence            999999999999999999999876543

>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.92  E-value=1.9e-24  Score=142.79  Aligned_cols=99  Identities=18%  Similarity=0.225  Sum_probs=84.4

Q ss_pred             CCceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEe----cCCCCCCCCCcceEEeCCceEEEe--eccccCCCCceEEEE
Q 035610           26 QPGAIGPANKQGD-YIKTWLRRWFILKQGEHFWFK----DSHNITRGSTPRGFIPVGTCLTVK--CAEDVLNKPFAFEHS   98 (144)
Q Consensus        26 ~~~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k----~~~~~~~~~~~~~~i~L~~~~~v~--~~~~~~~~~~~f~I~   98 (144)
                      ++.++|||.|+|+ ..+.|++|||||.++.|+||+    ++.    +..|.|+|.|.+++...  +.++...++++|.+.
T Consensus         7 n~~~~G~L~KqG~~~~K~WKrRwFVL~~~~LyYfk~~~~~~~----~~~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~~v   82 (126)
T 1wi1_A            7 GMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREK----KAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAV   82 (126)
T ss_dssp             CEEEEEEEEEECSSSCCSCEEEEEEEEEEETTEEEEEECCSS----SSCCSEEEECSSCEEEECCCCSSCCSCSSEEEEE
T ss_pred             CCceeEEEEEeCCCcccccceEEEEEeCCEEEEEEccccccc----CCCCceEEECCCcEEEEecCCcccccCceEEEEe
Confidence            4579999999986 568999999999999999999    776    78899999999965421  223335688999999


Q ss_pred             eCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           99 RGGYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        99 ~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      .++++|+|+|+|++|++.||.+|.+|+.+.
T Consensus        83 ~~~~ty~~~Adseee~~~WikAi~~A~~~~  112 (126)
T 1wi1_A           83 KEGDTVIFASDDEQDRILWVQAMYRATGQS  112 (126)
T ss_dssp             CSSCEEEEECSSHHHHHHHHHHHHHHHTCS
T ss_pred             cCCceEEEEcCCHHHHHHHHHHHHHHhccc
Confidence            988899999999999999999999998643

>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.92  E-value=1e-23  Score=144.15  Aligned_cols=99  Identities=8%  Similarity=-0.045  Sum_probs=85.6

Q ss_pred             CceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEE
Q 035610           27 PGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYS  106 (144)
Q Consensus        27 ~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l  106 (144)
                      ..++|||.|+|+..+.|++|||||+++.|+||+++.    +..+.+.|+|.++..+..........++|.|.+++++|+|
T Consensus        18 v~keG~L~Kkg~~~k~WkrRWFvLk~~~L~Yyk~~~----d~~~~g~I~L~~~~~~~~~~~~~~~~~~F~I~t~~r~~~f   93 (149)
T 1x1f_A           18 LYFEGFLLIKRSGYREYEHYWTELRGTTLFFYTDKK----SIIYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPKEEVQL   93 (149)
T ss_dssp             EEEEEEEEEECTTCCSCEEEEEEEETTEEEEESCSS----CSSCSEECCCSSCCEEEECCCTTSCCCEEEEECSSCCEEE
T ss_pred             ccEEEEEEEeCCCCCCceeEEEEEcCCEEEEEeCCC----ccccCcEEECCCceEEeeccCCCCcCcEEEEEcCCCEEEE
Confidence            569999999999899999999999999999999987    7788899999997766333222245689999999999999


Q ss_pred             EcCCHHHHHHHHHHHHHHHHhcC
Q 035610          107 VADTEKEKGERINSIGRAIVQHS  129 (144)
Q Consensus       107 ~a~s~~e~~~Wi~al~~ai~~~~  129 (144)
                      +|+|.+|+++||.+|+.++....
T Consensus        94 ~A~s~ee~~eWi~aI~~v~~~~~  116 (149)
T 1x1f_A           94 KTENTESGEEWRGFILTVTELSV  116 (149)
T ss_dssp             ECSSHHHHHHHHHHHHHHHHSSC
T ss_pred             EcCCHHHHHHHHHHHHHHHcccC
Confidence            99999999999999999886443

>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A

Probab=99.91  E-value=2.1e-23  Score=138.23  Aligned_cols=102  Identities=27%  Similarity=0.350  Sum_probs=89.8

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeE
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYT  103 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~  103 (144)
                      ...+.++|||.|+++..+.|++|||+|.++.|+||+++.    +..+.+.|+|.++..+...+. .+++++|.|.++++.
T Consensus        15 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~~v~~~~~-~~~~~~F~i~~~~r~   89 (126)
T 1fao_A           15 PSLGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQM----SPEPIRILDLTECSAVQFDYS-QERVNCFCLVFPFRT   89 (126)
T ss_dssp             CCTTCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTT----CSSCSEEEEGGGCCEEEEECS-SSSSSEEEEEETTEE
T ss_pred             CCCccEEEEEEEcCCCCCCcccEEEEEECCEEEEeCCCC----CCCceeEEEccceEEEEeccc-CCCCCEEEEEeCCcE
Confidence            446789999999998889999999999999999999987    788999999999877665443 467899999999999


Q ss_pred             EEEEcCCHHHHHHHHHHHHHHHHhcCC
Q 035610          104 MYSVADTEKEKGERINSIGRAIVQHSR  130 (144)
Q Consensus       104 ~~l~a~s~~e~~~Wi~al~~ai~~~~~  130 (144)
                      |+|.|+|.+++++|+.+|+.++.....
T Consensus        90 ~~l~a~s~~e~~~Wi~al~~~i~~~~~  116 (126)
T 1fao_A           90 FYLCAKTGVEADEWIKILRWKLSQIRK  116 (126)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHHHTC--
T ss_pred             EEEECCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999977443

>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=99.91  E-value=3.5e-23  Score=133.99  Aligned_cols=99  Identities=15%  Similarity=0.184  Sum_probs=86.0

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC-e
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG-Y  102 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~-~  102 (144)
                      ..++.++|||.|+++..+.|++|||||+++.|+||+++.    +..+.+.|+|.++..+...+. ..++++|.|.+++ +
T Consensus         5 ~~~~~~~G~L~K~~~~~~~Wk~RwfvL~~~~L~yyk~~~----~~~~~~~i~L~~~~~~~~~~~-~~~~~~F~i~~~~~~   79 (109)
T 1wgq_A            5 SSGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASE----DVAALESQPLLGFTVTLVKDE-NSESKVFQLLHKGMV   79 (109)
T ss_dssp             CCSCSCEEEEEEESSTTSCCEEEEEEEETTEEEEESCTT----CSSCSEEEECSSEEEEECCCS-SCSSSEEEEEETTEE
T ss_pred             CCCCeEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCC----cCccCceEECCCCEEEECCCC-CCCCcEEEEEeCCCe
Confidence            346779999999998889999999999999999999987    778999999999877654443 3567999999876 5


Q ss_pred             EEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610          103 TMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       103 ~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      .|+|+|+|.+++++||.+|+.|+..
T Consensus        80 ~~~~~a~s~~e~~~Wi~al~~a~~~  104 (109)
T 1wgq_A           80 FYVFKADDAHSTQRWIDAFQEGTVS  104 (109)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHHHSC
T ss_pred             EEEEECCCHHHHHHHHHHHHHHhcc
Confidence            7999999999999999999998743

>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.91  E-value=1.3e-23  Score=136.96  Aligned_cols=101  Identities=25%  Similarity=0.219  Sum_probs=89.2

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeE
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYT  103 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~  103 (144)
                      ...+.++|||.|+++..+.|++|||||.++.|+||+++.    +..+.+.|+|.++..|...++...++++|.|.++++.
T Consensus         5 ~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~~r~   80 (115)
T 2dn6_A            5 SSGVLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSED----LKDKKGDILLDENCCVESLPDKDGKKCLFLVKCFDKT   80 (115)
T ss_dssp             CCSCSEEEEEEEECTTSSCEEEEEEEECSSCEEEESSTT----CSSEEEEECCCTTCEEEEECCCTTCCSEEEEECSSCE
T ss_pred             CCCceEEEEEEecCCCCCCcEEeEEEEECCEEEEeCCCC----CcccCcEEEecCcEEEEECCCCCCCeeEEEEEeCCCE
Confidence            456789999999998889999999999999999999887    6789999999987666555443467899999999999


Q ss_pred             EEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          104 MYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       104 ~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      |+|+|+|.+++++|+.+|+.++...
T Consensus        81 ~~l~a~s~~e~~~Wi~ai~~~~~~~  105 (115)
T 2dn6_A           81 FEISASDKKKKQEWIQAIHSTIHLL  105 (115)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999988654

>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.91  E-value=3.8e-23  Score=135.03  Aligned_cols=101  Identities=24%  Similarity=0.412  Sum_probs=87.2

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-cCCCCceEEEEe---
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-VLNKPFAFEHSR---   99 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-~~~~~~~f~I~~---   99 (144)
                      ...+.++|||.|+++..+.|++|||||.++.|+||+++.    +..+.+.|+|.++..+..... ...++++|.|.+   
T Consensus         5 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~   80 (118)
T 1v89_A            5 SSGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEE----DTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASW   80 (118)
T ss_dssp             SSCEEEEEEEEEECSSSSCEEEEEEEEETTEEEEESSSS----CCSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCC
T ss_pred             CCCCcEEEEEEecCCCCCCccEEEEEEECCEEEEEeCCC----CCCceEEEECCCCEEEEcCcCcccCCcceEEEECCcc
Confidence            346779999999998889999999999999999999987    788999999999776543322 245689999998   


Q ss_pred             -----CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          100 -----GGYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       100 -----~~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                           +.+.|+|+|+|.+|+++|+.+|+.++...
T Consensus        81 ~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~  114 (118)
T 1v89_A           81 DQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGSG  114 (118)
T ss_dssp             SSCCSSCCCEEEECSSHHHHHHHHHHHHHHHHCC
T ss_pred             ccccCCCcEEEEECCCHHHHHHHHHHHHHHHccC
Confidence                 77899999999999999999999998644

>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.91  E-value=1.7e-23  Score=140.07  Aligned_cols=96  Identities=17%  Similarity=0.256  Sum_probs=81.0

Q ss_pred             cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC---
Q 035610           25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG---  101 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~---  101 (144)
                      ....++|||.|+| ..+.|++|||||+++.|+||+++.    +..+.|.|+|.++..+. ..+ ..++++|.|.++.   
T Consensus         6 ~~v~k~GwL~K~g-~~k~WkrRWfVLk~~~L~yyk~~~----~~~p~G~I~L~~~~v~~-~~~-~~~~~~F~i~~~~~~~   78 (130)
T 1v88_A            6 SGIVMADWLKIRG-TLKSWTKLWCVLKPGVLLIYKTQK----NGQWVGTVLLNACEIIE-RPS-KKDGFCFKLFHPLEQS   78 (130)
T ss_dssp             SSCCEEEEEEECC-SSSSCEEEEEEEETTEEEEESCSS----SCCCCEEEECSSCEECC-CCT-TTSSCEEEEECTTCCC
T ss_pred             CceEEEeEEEEeC-CCCCceEEEEEEECCEEEEECCCC----CCCceEEEEcCCCEEEE-CCC-CCCCeEEEEEcCCccc
Confidence            3567999999998 789999999999999999999987    78899999999976542 222 2456999999653   


Q ss_pred             ---------------------eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610          102 ---------------------YTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       102 ---------------------~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                                           +.|+|+|+|++|+++||++|+.++..
T Consensus        79 i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~~  125 (130)
T 1v88_A           79 IWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKS  125 (130)
T ss_dssp             CSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHTT
T ss_pred             cccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHhc
Confidence                                 23889999999999999999999854

>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1

Probab=99.91  E-value=1.8e-23  Score=136.60  Aligned_cols=101  Identities=16%  Similarity=0.281  Sum_probs=87.3

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEe--CCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc------cCCCCceE
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILK--QGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED------VLNKPFAF   95 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~--~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~------~~~~~~~f   95 (144)
                      ...+.++|||.|+++..+.|++|||||.  ++.|+||+++.    +..+.+.|+|..+..+...+.      ...++++|
T Consensus         5 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~----~~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F   80 (117)
T 1v5u_A            5 SSGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRM----DTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFF   80 (117)
T ss_dssp             CCSSSEEEEEEECCCSSSCCEEEEEEEETTTTEEEEESSSS----CSSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCE
T ss_pred             cCCccEEEEEEecCCCCCCceeeEEEEECCCCEEEEeecCC----CCccceEEEccCcEEEeecCccccccccCCCCeEE
Confidence            4567899999999988899999999999  88999999987    678999999999887754431      13455899


Q ss_pred             EEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           96 EHSRGGYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        96 ~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      .|.++++.|+|+|+|.+++++||.+|+.++...
T Consensus        81 ~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~  113 (117)
T 1v5u_A           81 DVKTTRRVYNFCAQDVPSAQQWVDRIQSCLSSG  113 (117)
T ss_dssp             EEEESSCEEEEECSSHHHHHHHHHHHHTTCCCC
T ss_pred             EEECCCceEEEECCCHHHHHHHHHHHHHHhccC
Confidence            999999999999999999999999999987543

>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*

Probab=99.91  E-value=5.7e-23  Score=135.91  Aligned_cols=100  Identities=31%  Similarity=0.467  Sum_probs=86.4

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC--
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG--  101 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~--  101 (144)
                      +.++.++|||.|+|+..+.|++|||||.++.|+||+++.    +..+.|.|+|.++..+ ...+ ..++++|.|.+++  
T Consensus         2 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~-~~~~-~~~~~~f~i~~~~~~   75 (127)
T 1fgy_A            2 FFNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTT----DKEPRGIIPLENLSIR-EVLD-PRKPNCFELYNPSHK   75 (127)
T ss_dssp             CSSCSEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTT----CSSCSEEEECTTCEEE-EECC-SSCSSEEEEECSSST
T ss_pred             CCCCceEeEEEEECCCCCCeEEEEEEEECCEEEEeCCCC----CCCcceEEECCceEEE-EccC-CCCCceEEEecCCcc
Confidence            467899999999998889999999999999999999887    6789999999997544 3333 3678999998653  


Q ss_pred             --------------------eEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610          102 --------------------YTMYSVADTEKEKGERINSIGRAIVQHS  129 (144)
Q Consensus       102 --------------------~~~~l~a~s~~e~~~Wi~al~~ai~~~~  129 (144)
                                          +.|+|+|+|.+|+++||.+|+.++....
T Consensus        76 ~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~  123 (127)
T 1fgy_A           76 GQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDP  123 (127)
T ss_dssp             TCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHHCT
T ss_pred             ccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhccCC
Confidence                                6899999999999999999999986543

>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.90  E-value=6.1e-23  Score=135.13  Aligned_cols=99  Identities=16%  Similarity=0.180  Sum_probs=86.4

Q ss_pred             ecCCceEEEEEeeCC--CCCCceeEEEEEeCC--eEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEe
Q 035610           24 WSQPGAIGPANKQGD--YIKTWLRRWFILKQG--EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSR   99 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~--~~~~w~~R~fvL~~~--~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~   99 (144)
                      ..++.++|||.|+++  ..+.|++|||||.++  .|+||+++.    +..+.|.|+|.++..+...   ...+++|.|.+
T Consensus         5 ~~~~~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~----~~~~~g~I~L~~~~~~~~~---~~~~~~F~i~~   77 (119)
T 2dhk_A            5 SSGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQ----DANPLDSIDLSSAVFDCKA---DAEEGIFEIKT   77 (119)
T ss_dssp             CSCCCCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTT----CCSCSEEEEGGGCEEEECT---TGGGCEEEEEC
T ss_pred             CCCCcEEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCC----CcccccEEECCCCEEEecC---CCCCCEEEEEe
Confidence            467789999999986  678999999999998  999999987    6789999999998776532   24568999999


Q ss_pred             CCeEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610          100 GGYTMYSVADTEKEKGERINSIGRAIVQHS  129 (144)
Q Consensus       100 ~~~~~~l~a~s~~e~~~Wi~al~~ai~~~~  129 (144)
                      +++.|+|+|+|.+++++||.+|+.++....
T Consensus        78 ~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~  107 (119)
T 2dhk_A           78 PSRVITLKAATKQAMLYWLQQLQMKRWEFH  107 (119)
T ss_dssp             SSCCEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999886543

>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.90  E-value=1.3e-22  Score=132.52  Aligned_cols=96  Identities=19%  Similarity=0.242  Sum_probs=85.3

Q ss_pred             cCCceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeE
Q 035610           25 SQPGAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYT  103 (144)
Q Consensus        25 ~~~~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~  103 (144)
                      ..+.++|||.|+++ ..+.|++|||+|.++.|.||+++.    +..+.+.|+|..+..|...+     +++|.|.++++.
T Consensus         6 ~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~----~~~~~g~i~l~~~~~v~~~~-----~~~F~i~~~~r~   76 (115)
T 2cod_A            6 SGKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEK----EMYSKGIIPLSAISTVRVQG-----DNKFEVVTTQRT   76 (115)
T ss_dssp             SCCCEEEEEEECCSSSSSCCEEEEEEECSSEEEEEESSC----CSSCCCEEETTTEEEEEEET-----TTEEEEEESSCC
T ss_pred             CCccEEEEEEEcCCCCCCCCceEEEEEECCEEEEEcCCC----CcccCCEEECCcceEEEeCC-----CCEEEEEeCCcE
Confidence            35679999999987 778999999999999999999987    67899999999987665433     589999999999


Q ss_pred             EEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610          104 MYSVADTEKEKGERINSIGRAIVQHS  129 (144)
Q Consensus       104 ~~l~a~s~~e~~~Wi~al~~ai~~~~  129 (144)
                      |+|.|+|.+++++||.+|+.++....
T Consensus        77 ~~l~a~s~~e~~~Wi~~l~~~~~~~~  102 (115)
T 2cod_A           77 FVFRVEKEEERNDWISILLNALKSQS  102 (115)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHHHHHS
T ss_pred             EEEECCCHHHHHHHHHHHHHHHHhCc
Confidence            99999999999999999999996543

>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A

Probab=99.90  E-value=3.8e-23  Score=135.43  Aligned_cols=98  Identities=17%  Similarity=0.178  Sum_probs=81.6

Q ss_pred             CCceEEEEEee-CCCCC-CceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-cCCCCceEEEEeCC-
Q 035610           26 QPGAIGPANKQ-GDYIK-TWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-VLNKPFAFEHSRGG-  101 (144)
Q Consensus        26 ~~~~~G~L~k~-~~~~~-~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-~~~~~~~f~I~~~~-  101 (144)
                      .++++|||.|+ ++..+ .|++|||||++.+|+||+++.    +..++|+|+|.++ .+...++ ...++|+|.|..++ 
T Consensus        11 ~VirkGWL~k~~~g~~k~~wk~rWFVLt~~~L~yyKd~~----eke~~G~IpL~~~-~vr~v~~~~~~rk~~F~l~~~d~   85 (125)
T 1dyn_A           11 LVIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDE----EKEKKYMLSVDNL-KLRDVEKGFMSSKHIFALFNTEQ   85 (125)
T ss_dssp             CEEEEEEEEESCCCGGGTSSEEEEEEEESSEEEEESSTT----CSCEEEEEECTTE-EEEECCSCSSSSCEEEEEEETTS
T ss_pred             ceEEEEEEEEecCccccCCceeeEEEEeccceeeecCCc----ccccceEEECCCc-eEeccCCCCCCCceEEEEECCCC
Confidence            36799999995 66676 499999999999999999998    8999999999994 4454443 34788999999764 


Q ss_pred             -------eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          102 -------YTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       102 -------~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                             ++|.|.|+|.+|+++|+++|.+|-.-+
T Consensus        86 r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra~v~p  119 (125)
T 1dyn_A           86 RNVYKDYRQLELACETQEEVDSWKASFLRAGVYP  119 (125)
T ss_dssp             SCSSTTCSSEEEEESSHHHHHHHHHHHHHTTCEE
T ss_pred             ccccccceEEEEeCCCHHHHHHHHHHHHhCccCc
Confidence                   489999999999999999997754433

>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}

Probab=99.90  E-value=5.1e-23  Score=130.01  Aligned_cols=91  Identities=21%  Similarity=0.327  Sum_probs=78.6

Q ss_pred             ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEE
Q 035610           28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSV  107 (144)
Q Consensus        28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~  107 (144)
                      .++|||.|+|+..+.|++|||||.++.|.||+++.+  ....+.+.++|.++..+..    ...+++|.|.+++++|+|+
T Consensus         2 ~k~G~L~K~g~~~k~WkkR~FvL~~~~L~Yy~~~~~--~~~~~~~~i~l~~~~~~~~----~~~~~~F~i~~~~r~~~l~   75 (94)
T 2rsg_A            2 ERCGVLSKWTNYIHGWQDRWVVLKNNALSYYKSEDE--TEYGCRGSICLSKAVITPH----DFDECRFDISVNDSVWYLR   75 (94)
T ss_dssp             CEEEEEEEESSSTTCEEEEEEEEETTEEEEESSTTG--GGTCCSEEEETTTCEEEEC----SSCSSEEEEEETTEEEEEE
T ss_pred             CEEEEEEEeCCCCCCceEEEEEEECCEEEEEEeccc--ccccceeeEecceeeeecC----cccceeEEEEeCCeEEEEE
Confidence            689999999999999999999999999999998751  1245789999999655432    2456899999999999999


Q ss_pred             cCCHHHHHHHHHHHHHH
Q 035610          108 ADTEKEKGERINSIGRA  124 (144)
Q Consensus       108 a~s~~e~~~Wi~al~~a  124 (144)
                      |+|++|+++||++|++|
T Consensus        76 A~s~~e~~~Wi~aLq~A   92 (94)
T 2rsg_A           76 AQDPDHRQQWIDAIEQH   92 (94)
T ss_dssp             CCSSCCTHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHhh
Confidence            99999999999999986

>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=99.90  E-value=7.4e-23  Score=136.32  Aligned_cols=101  Identities=19%  Similarity=0.306  Sum_probs=81.8

Q ss_pred             CCceEEEEEeeC-CCCCCceeEEEEEe---CCeEEEEecCCCCCCCCCcceEEeCCceEEEeecc--ccCCCCceEEEEe
Q 035610           26 QPGAIGPANKQG-DYIKTWLRRWFILK---QGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE--DVLNKPFAFEHSR   99 (144)
Q Consensus        26 ~~~~~G~L~k~~-~~~~~w~~R~fvL~---~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~--~~~~~~~~f~I~~   99 (144)
                      +..++|||.|+| ...+.|++|||||+   +..|+||+++........+.|.|+|..+..|....  ....++++|.|.+
T Consensus        14 ~~~~~G~L~K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~i~t   93 (126)
T 1v5p_A           14 QNRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKPKTPFCFVINA   93 (126)
T ss_dssp             CCCEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECCTTTSCSCSSEEEEEC
T ss_pred             CCceEEEEEEeCCCCCCCccceEEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCccEEecCCcccCCCCCEEEEEEC
Confidence            445799999998 67899999999999   55677778732111267899999999977776543  2345679999999


Q ss_pred             CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610          100 GGYTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus       100 ~~~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      +.++|+|+|+|++|+++||++|+.|+.
T Consensus        94 ~~r~y~l~A~s~~e~~~Wi~al~~a~~  120 (126)
T 1v5p_A           94 LSQRYFLQANDQKDLKDWVEALNQASK  120 (126)
T ss_dssp             SSCEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred             CCEEEEEECCCHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999764

>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A

Probab=99.90  E-value=1.7e-22  Score=130.44  Aligned_cols=98  Identities=24%  Similarity=0.287  Sum_probs=81.9

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCC--eEEEEecCCCCCCCCCcceEEeCCceEEEeeccc----cCCCCceEEE
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQG--EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED----VLNKPFAFEH   97 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~--~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~----~~~~~~~f~I   97 (144)
                      ..++.++|||.|+++..+.|++|||||.++  .|.||+++.    +..+.+.|+|.++..+.....    ..+++++|.|
T Consensus         4 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yyk~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i   79 (109)
T 2i5f_A            4 TGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAG----AEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEI   79 (109)
T ss_dssp             CCCEEEEEEEEEECTTTCCEEEEEEEEETTTTEEEEECTTS----CSSCSEEEECTTCEEEEECC--------CCSEEEE
T ss_pred             cCceeEEEEEEEcCCCCCCceEEEEEEeCCCcEEEEECCCC----CCCccEEEECCCCEEEEccCCcccccCCCceEEEE
Confidence            456779999999998889999999999986  999999887    788999999999765433222    1237899999


Q ss_pred             EeCC-eEEEEEcCCHHHHHHHHHHHHHHH
Q 035610           98 SRGG-YTMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus        98 ~~~~-~~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      .+++ +.|+|+|+|.+++++|+.+|+.++
T Consensus        80 ~~~~~~~~~l~a~s~~e~~~Wi~ai~~~~  108 (109)
T 2i5f_A           80 ITADEVHYFLQAATPKERTEWIKAIQMAS  108 (109)
T ss_dssp             ECTTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             EeCCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence            9886 569999999999999999999986

>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A

Probab=99.90  E-value=1.8e-22  Score=134.20  Aligned_cols=104  Identities=25%  Similarity=0.291  Sum_probs=86.9

Q ss_pred             ceeecCCceEEEEEeeCCCCCCceeEEEEEeCC--eEEEEecCCCCCCCCCcceEEeCCceEEEeeccc----cCCCCce
Q 035610           21 IEFWSQPGAIGPANKQGDYIKTWLRRWFILKQG--EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED----VLNKPFA   94 (144)
Q Consensus        21 ~~~~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~--~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~----~~~~~~~   94 (144)
                      .+....+.++|||.|+++..+.|++|||||.++  .|+||+++.    +..+.+.|+|.+|..+.....    ..+++++
T Consensus        12 ~~~~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~   87 (129)
T 1x05_A           12 EEFRGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAG----AEDPLGAIHLRGCVVTSVESNSNGRKSEEENL   87 (129)
T ss_dssp             STTCSEEEEEEEEEECCSSCCCCEEEEEEEEETTTEEEEECSSC----CSSCSEEEECTTCEEEECCCCCCSSSCSSCSE
T ss_pred             ccccCCceEEEEEEecCCCCCCCeeEEEEEeCCCCEEEEECCCC----CCcceeEEEccCCEEEEccCCccccccCCCeE
Confidence            345667889999999998889999999999976  899999887    788999999999765433222    1237899


Q ss_pred             EEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           95 FEHSRGG-YTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        95 f~I~~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      |.|.+++ +.|+|+|+|.+++++||.+|+.++...
T Consensus        88 F~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~  122 (129)
T 1x05_A           88 FEIITADEVHYFLQAATPKERTEWIKAIQMASRTG  122 (129)
T ss_dssp             EEEECTTCCCCEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred             EEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHcc
Confidence            9999875 669999999999999999999998654

>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1

Probab=99.89  E-value=2.5e-22  Score=132.53  Aligned_cols=102  Identities=28%  Similarity=0.383  Sum_probs=88.9

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecc--ccCCCCceEEEEeCC
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE--DVLNKPFAFEHSRGG  101 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~--~~~~~~~~f~I~~~~  101 (144)
                      .....++|||.|+++..+.|++|||+|.++.|+||+++.    +..+.+.|+|.++..+....  +...++++|.|.+++
T Consensus        11 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~~   86 (125)
T 1eaz_A           11 DSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSEL----EKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTS   86 (125)
T ss_dssp             -CCCSEEEEEEEECTTTCCEEEEEEEECSSEEEEESSTT----CSSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSS
T ss_pred             CCCccEEEEEEEeCCCCCCcceEEEEEeCCEEEEEcCCC----CCcceeEEEcccceEEeeccccccCCcCCEEEEEeCC
Confidence            456779999999998889999999999999999999987    78899999999987765432  223678999999999


Q ss_pred             eEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610          102 YTMYSVADTEKEKGERINSIGRAIVQHS  129 (144)
Q Consensus       102 ~~~~l~a~s~~e~~~Wi~al~~ai~~~~  129 (144)
                      +.|+|+|+|.+++++|+.+|+.++....
T Consensus        87 r~~~l~a~s~~e~~~W~~al~~~i~~~~  114 (125)
T 1eaz_A           87 RTFYVQADSPEEMHSWIKAVSGAIVAQR  114 (125)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHHHHHHTC
T ss_pred             cEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999987643

>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.89  E-value=2.1e-22  Score=131.53  Aligned_cols=100  Identities=15%  Similarity=0.168  Sum_probs=84.0

Q ss_pred             eecCCceEEEEEeeCCCCCCceeEEEEEeCC---eEEEEecCCCCCCCCCcceEEeCCceEEEee-ccccCCCCceEEEE
Q 035610           23 FWSQPGAIGPANKQGDYIKTWLRRWFILKQG---EHFWFKDSHNITRGSTPRGFIPVGTCLTVKC-AEDVLNKPFAFEHS   98 (144)
Q Consensus        23 ~~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~---~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~-~~~~~~~~~~f~I~   98 (144)
                      ...+..++|||.|++. .+.|++|||||+++   .|+||+++.    +..+.+.|+|.+|..... ..+...++++|+|.
T Consensus         4 ~~~~~~~~G~L~k~~~-~~~WkkrWfVL~~~~~~~Ly~Yk~~~----d~~p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~   78 (112)
T 2coc_A            4 GSSGSLLCGPLRLSES-GETWSEVWAAIPMSDPQVLHLQGGSQ----DGRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQ   78 (112)
T ss_dssp             CCSSSSSEEEEEEESS-SSCEEEEEEECCTTCTTCEEEECCTT----CSSSCSEECGGGCEEECCCSSSCCSSSEEEEEE
T ss_pred             ccCCceEEEEEEecCC-CCCceEEEEEEECCCccEEEEECCCC----ccCcceEEEcCCCEEEecCcccccCCCCEEEEe
Confidence            3456678899999865 78999999999985   699999987    788999999999765431 22234578999999


Q ss_pred             eCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           99 RGGYTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        99 ~~~~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      .+.+.|+|+|+|.+++++||++|+.|+..
T Consensus        79 ~~~~~y~f~A~s~e~~~~Wl~al~~A~~~  107 (112)
T 2coc_A           79 WAKQSWYLSASSAELQQQWLETLSTAAHS  107 (112)
T ss_dssp             ETTEEEEEEESSHHHHHHHHHHHHHHHSC
T ss_pred             cCCeEEEEEcCCHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999998743

>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A

Probab=99.89  E-value=5.9e-23  Score=136.35  Aligned_cols=105  Identities=18%  Similarity=0.150  Sum_probs=81.1

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCC-----CCCCCCcceEEeCCceEEEeeccccCCCCceEEEE
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHN-----ITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHS   98 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~-----~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~   98 (144)
                      ...+.++|||.|++...+.|++|||||+++.|+||+++..     ......+.|.|+|.+|..+...++...++++|+|.
T Consensus         9 ~~~~~k~G~L~K~g~~~k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~v~~~~~~~~~k~~~F~I~   88 (124)
T 2w2x_D            9 KDEHKQQGELYMWDSIDQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVKAPQGKNQKSFVFILE   88 (124)
T ss_dssp             ----CCEEEEEEEETTTTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEEEEECTTCBTTBSEEEEEE
T ss_pred             hhhcceeEEEEEECCCCCCceEeEEEEECCEEEEEcccccccccccccCCccccEEECCCCEEEEccCCcCCCCEEEEEE
Confidence            4467899999999988999999999999999999997420     00113458999999987654444335688999999


Q ss_pred             eCC---eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           99 RGG---YTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        99 ~~~---~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      ++.   +.|+|+|+|.+++++||.+|++++...
T Consensus        89 ~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~~  121 (124)
T 2w2x_D           89 PKQQGDPPVEFATDKVEELFEWFQSIREITWKI  121 (124)
T ss_dssp             ECC--CCCEEEEECCCHHHHHHHHHHHHHHC--
T ss_pred             CCCCCCceEEEEECCHHHHHHHHHHHHHHHHhh
Confidence            753   679999999999999999999987543

>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A

Probab=99.89  E-value=1.1e-22  Score=132.15  Aligned_cols=98  Identities=14%  Similarity=0.162  Sum_probs=80.5

Q ss_pred             cCCceEEEEEeeCCCCCCceeEEEEE-eCCeEEEEecCCCCCCCCCcceEEeCCceE-------EEee--ccccCCCCce
Q 035610           25 SQPGAIGPANKQGDYIKTWLRRWFIL-KQGEHFWFKDSHNITRGSTPRGFIPVGTCL-------TVKC--AEDVLNKPFA   94 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~~~~w~~R~fvL-~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~-------~v~~--~~~~~~~~~~   94 (144)
                      ..+.++|||.|+|+..+.|++||||| .++.|.||+++.    +..+.+.|+|....       .+..  .++...++++
T Consensus         3 ~~~~~~G~L~K~g~~~k~WkkR~fvL~~~~~L~yyk~~~----~~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~   78 (112)
T 3aj4_A            3 MAFVKSGWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQT----RQNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCM   78 (112)
T ss_dssp             CSCSEEEEEEEECSSSCCEEEEEEEECTTSEEEEESSTT----CCSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGE
T ss_pred             cceeEEEEEEeeCCCCCCeeceEEEEeeCCEEEEEcCCC----CCCCCccccccccceeecccccccccCCCCCCCcCcE
Confidence            35779999999998889999999999 889999999987    67889999887644       2211  2222233689


Q ss_pred             EEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610           95 FEHSRG-GYTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus        95 f~I~~~-~~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      |.|.++ ++.|+|+|+|.+|+++||.+|+.|..
T Consensus        79 F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~  111 (112)
T 3aj4_A           79 LQIVCRDGKTISLCAESTDDCLAWKFTLQDSRT  111 (112)
T ss_dssp             EEEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred             EEEEecCCcEEEEEeCCHHHHHHHHHHHHHHhh
Confidence            999965 79999999999999999999999863

>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*

Probab=99.89  E-value=1.6e-22  Score=141.00  Aligned_cols=104  Identities=15%  Similarity=0.183  Sum_probs=82.8

Q ss_pred             CCceEEEEEeeCC-----CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeec---cc-cCCC-----
Q 035610           26 QPGAIGPANKQGD-----YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA---ED-VLNK-----   91 (144)
Q Consensus        26 ~~~~~G~L~k~~~-----~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~---~~-~~~~-----   91 (144)
                      .++++|||.|++.     ..+.|++|||||+++.|.||+++.+...+..++|.|+|.++..|...   ++ ...+     
T Consensus         2 ~vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~   81 (169)
T 1btk_A            2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRR   81 (169)
T ss_dssp             CCCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC---
T ss_pred             ceEEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchhcccccc
Confidence            3579999999863     24689999999999999999983100015789999999998776554   22 1122     


Q ss_pred             ----------------CceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610           92 ----------------PFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHS  129 (144)
Q Consensus        92 ----------------~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~~  129 (144)
                                      +++|+|.+++++|+|+|+|.+|+++||++|+.++....
T Consensus        82 ~~~~~~~~~~~i~~~~~~~F~I~t~~rt~yl~A~s~~E~~eWi~aI~~~i~~n~  135 (169)
T 1btk_A           82 GEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIRYNS  135 (169)
T ss_dssp             ------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHHHHHHHHHTTCS
T ss_pred             cCcccccccccccccccccEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHHHCc
Confidence                            28999999999999999999999999999999996544

>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1

Probab=99.89  E-value=1.6e-22  Score=129.99  Aligned_cols=98  Identities=15%  Similarity=0.273  Sum_probs=83.1

Q ss_pred             CCceEEEEEeeCCCC----CCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeec--cccCCCCceEEEEe
Q 035610           26 QPGAIGPANKQGDYI----KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA--EDVLNKPFAFEHSR   99 (144)
Q Consensus        26 ~~~~~G~L~k~~~~~----~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~--~~~~~~~~~f~I~~   99 (144)
                      ++.++|||.|+++..    +.|++|||+|.++.|+||+++.    +..+.+.|+|.++..+...  .....++++|.|.+
T Consensus         2 ~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~   77 (108)
T 1u5d_A            2 SVIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEK----SKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTS   77 (108)
T ss_dssp             CEEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTT----CSSCSEEEECTTCEEEECGGGCSSGGGGGEEEEEC
T ss_pred             CccEEEEEEEcCCCCCccccCceeeEEEEeCCEEEEecCCC----CCCCCEEEEecceEEEeCCccccccCCcceEEEEc
Confidence            467999999997432    8999999999999999999987    7789999999998754322  12235679999998


Q ss_pred             CC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610          100 GG-YTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       100 ~~-~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      ++ +.|+|+|+|.+++++|+.+|+.++..
T Consensus        78 ~~~r~~~l~a~s~~e~~~Wi~ai~~~i~~  106 (108)
T 1u5d_A           78 QDRRTYEFTATSPAEARDWVDQISFLLKD  106 (108)
T ss_dssp             SSSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCHHHHHHHHHHHHHHHHh
Confidence            87 89999999999999999999999864

>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.89  E-value=1.6e-22  Score=134.41  Aligned_cols=110  Identities=19%  Similarity=0.221  Sum_probs=88.6

Q ss_pred             CCCCCCceeecCCceEEEEEeeCCCCCCceeEEEEEe--CCeEEEEecC-CCCCCCCCcceEEeCCceEEEeeccc----
Q 035610           15 PVDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILK--QGEHFWFKDS-HNITRGSTPRGFIPVGTCLTVKCAED----   87 (144)
Q Consensus        15 ~~~~~~~~~~~~~~~~G~L~k~~~~~~~w~~R~fvL~--~~~l~y~k~~-~~~~~~~~~~~~i~L~~~~~v~~~~~----   87 (144)
                      +...+.++...++.++|||.|++...+.|++|||||.  +..|+||+++ .    +..+++.|+|.+|..+...+.    
T Consensus         6 s~~~~~~~~~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~d~~~L~yy~~~~~----~~~~~g~i~L~~~~v~~~~~~~~p~   81 (129)
T 1x1g_A            6 SGSLSTVELSGTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKE----ENRPVGGFSLRGSLVSALEDNGVPT   81 (129)
T ss_dssp             CSCSCCCTTCSEEEEEEEEEEECSSSSSEEEEEEEEEESSCEEEEECSSSC----CSSCSCCEESTTCCCEECCSSSSCS
T ss_pred             ccCccccccCCCEEEEEEEEEECCCCCCeeeEEEEEeCCCCeEEEeCCCCc----CCccceEEECcCCEEEEeCCCCCcc
Confidence            3345556667788899999999988899999999999  4699999986 4    678999999998654322221    


Q ss_pred             c---CCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           88 V---LNKPFAFEHSRGG-YTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        88 ~---~~~~~~f~I~~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      .   ..++++|.|.+++ +.|+|+|+|.+|+++||.+|+.++.++
T Consensus        82 ~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~  126 (129)
T 1x1g_A           82 GVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKLTSGP  126 (129)
T ss_dssp             SCSSCCCSSCEEECCTTCCCEEECCSSHHHHHHHHHHHHHHSSSS
T ss_pred             cccCCCCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence            0   1157999999886 579999999999999999999988654

>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}

Probab=99.89  E-value=1.1e-21  Score=129.95  Aligned_cols=99  Identities=25%  Similarity=0.354  Sum_probs=84.4

Q ss_pred             cCCceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeec-cccCCCCceEEEEeCC-
Q 035610           25 SQPGAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA-EDVLNKPFAFEHSRGG-  101 (144)
Q Consensus        25 ~~~~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~-~~~~~~~~~f~I~~~~-  101 (144)
                      ....++|||.|+++ ..+.|++|||||.++.|+||+++.    +..+.+.|+|..+...... .+...++++|.|.+++ 
T Consensus        19 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~   94 (128)
T 2dkp_A           19 APVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEK----EEGILGSILLPSFQIALLTSEDHINRKYAFKAAHPNM   94 (128)
T ss_dssp             SCCCEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTT----CCSEEEEECGGGSEEEECCGGGCCSSCSEEEEECSSS
T ss_pred             CCcEEEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCC----CcccceEEEcCceEEEEcCCcccCCCCeEEEEEcCCC
Confidence            45679999999987 788999999999999999999987    7789999999987554322 2234678999999875 


Q ss_pred             eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610          102 YTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       102 ~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      +.|+|+|+|.+|+++|+.+|+.|+..
T Consensus        95 r~~~l~a~s~~e~~~Wi~al~~a~~~  120 (128)
T 2dkp_A           95 RTYYFCTDTGKEMELWMKAMLDAALV  120 (128)
T ss_dssp             CCEEEECSSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999998753

>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.88  E-value=5.1e-22  Score=132.70  Aligned_cols=101  Identities=15%  Similarity=0.171  Sum_probs=81.3

Q ss_pred             cCCceEEEEEeeCCCCCCceeEEEEE-eCCeEEEEecCCCCCCCCCcceEEeCCc-eEEEee--------ccccCCCCce
Q 035610           25 SQPGAIGPANKQGDYIKTWLRRWFIL-KQGEHFWFKDSHNITRGSTPRGFIPVGT-CLTVKC--------AEDVLNKPFA   94 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~~~~w~~R~fvL-~~~~l~y~k~~~~~~~~~~~~~~i~L~~-~~~v~~--------~~~~~~~~~~   94 (144)
                      ....++|||.|+++..+.|++||||| +++.|.||+++.    +..+.+.|.+.. +..+..        ..+...++++
T Consensus         6 ~~v~~~G~L~K~g~~~k~WkkRwFVL~~~~~L~Yyk~~~----~~~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~~~~~   81 (130)
T 2d9v_A            6 SGLVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDET----AQDEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGL   81 (130)
T ss_dssp             CCEEEEEEEEEECSSSCCEEEEEEEEETTTEEEEESSSS----TTSEEEEEECTTTEEEEEEGGGCSSCCCCSSCCTTTE
T ss_pred             CceeEEEEEEeecCccCCceeeEEEEccCCEEEEEeCCC----CCCcCceEecccceeEEeccccccccCCCCCCCcCcE
Confidence            35569999999998889999999999 899999999986    667888887763 222221        1122456799


Q ss_pred             EEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610           95 FEHSRG-GYTMYSVADTEKEKGERINSIGRAIVQHS  129 (144)
Q Consensus        95 f~I~~~-~~~~~l~a~s~~e~~~Wi~al~~ai~~~~  129 (144)
                      |.|.++ .++|+|+|+|.+|+++||++|+.++..+.
T Consensus        82 F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~~~~  117 (130)
T 2d9v_A           82 LTVNLREGSRLHLCAETRDDAIAWKTALMEANSTPA  117 (130)
T ss_dssp             EEEEETTSCEEEEECSSHHHHHHHHHHHHHHHTCCC
T ss_pred             EEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHcCCC
Confidence            999985 48999999999999999999999986543

>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B

Probab=99.88  E-value=7.2e-22  Score=128.90  Aligned_cols=95  Identities=16%  Similarity=0.210  Sum_probs=78.4

Q ss_pred             eEEEEEeeCC----CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEE-eeccccCCCCceEEEEeC-Ce
Q 035610           29 AIGPANKQGD----YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTV-KCAEDVLNKPFAFEHSRG-GY  102 (144)
Q Consensus        29 ~~G~L~k~~~----~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v-~~~~~~~~~~~~f~I~~~-~~  102 (144)
                      ++|||.++++    ..+.|++|||||+++.|+||+++.    +..+.+.|+|.+..+. ....+...++|+|+|.++ .+
T Consensus         2 keG~L~kK~g~~~~~~k~Wk~rwfvL~~~~L~~yk~~~----~~~p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~~~~   77 (112)
T 3cxb_B            2 KEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRT----DVIPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDRP   77 (112)
T ss_dssp             EEEEEEECCSCCCSSCCCCEEEEEEEETTEEEEESSSS----CCSCSEEEETTC-CEEEEEECCCSSCTTEEEEEETTSC
T ss_pred             ceEEEEEeCCCCCCCCCCceEEEEEEECCEEEEECCCC----CCCccceEEecCCEEEeeeccCCCCCCeEEEEEcCCCC
Confidence            7999997743    578999999999999999999987    7788999999975332 122233578899999965 67


Q ss_pred             EEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610          103 TMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       103 ~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      .|+|+|+|++++++||.+|+.++..
T Consensus        78 ~y~f~A~s~ee~~~Wi~ai~~~~~~  102 (112)
T 3cxb_B           78 CLELSAESEAEMAEWMQHLCQAVSK  102 (112)
T ss_dssp             CEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred             EEEEEcCCHHHHHHHHHHHHHHhhc
Confidence            9999999999999999999998854

>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A

Probab=99.88  E-value=9.6e-22  Score=129.85  Aligned_cols=98  Identities=10%  Similarity=0.129  Sum_probs=80.9

Q ss_pred             CceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccC-------CCCceEEEEe
Q 035610           27 PGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVL-------NKPFAFEHSR   99 (144)
Q Consensus        27 ~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~-------~~~~~f~I~~   99 (144)
                      ++++|||.|++...+.|++|||||+++.|+||++++ ...+..|.++|+|.+|......++..       ...+.|.|..
T Consensus         6 ~~k~G~L~Kk~~~~k~W~~rwfVL~~~~L~yyK~~~-~~~d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~   84 (120)
T 4a6h_A            6 EIKSGFLERRSKFLKSYSKGYYVLTPNFLHEFKTAD-RKKDLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHA   84 (120)
T ss_dssp             CSEEEEEEEEETTTTEEEEEEEEECSSEEEEESSCC-TTTCCSCSEEEEGGGEEEEEECCCCC---------CCEEEEEE
T ss_pred             ccEEEEEEEcCCCCCCCccEEEEEeCCEEEEEcCCC-cCcCCCceEEEECCCCEEEEcccccccccccccCCCcEEEEEe
Confidence            789999999999999999999999999999999875 22356699999999987765443321       2678899986


Q ss_pred             CC-------eEEEEEcCCHHHHHHHHHHHHHHH
Q 035610          100 GG-------YTMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus       100 ~~-------~~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      .+       +.|+|.|+|.+|+++|+++|+.++
T Consensus        85 ~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~  117 (120)
T 4a6h_A           85 KQNGIIRRGHNWVFKADSYESMMSWFDNLKILT  117 (120)
T ss_dssp             SSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred             CCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence            54       589999999999999999999865

>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A

Probab=99.88  E-value=8e-22  Score=134.21  Aligned_cols=103  Identities=13%  Similarity=0.139  Sum_probs=83.8

Q ss_pred             ecCCceEEEEEeeCCC----CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecc--ccCCCCceEEE
Q 035610           24 WSQPGAIGPANKQGDY----IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE--DVLNKPFAFEH   97 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~----~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~--~~~~~~~~f~I   97 (144)
                      ..++.++|||.|+++.    .+.|++|||||.++.|+||+++.    +..+.|.|+|.++..+....  ....++++|.|
T Consensus        14 ~~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~~~~L~yyk~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I   89 (148)
T 1u5f_A           14 LPFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDK----DKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEI   89 (148)
T ss_dssp             CSSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTT----CSSCSEEEECTTCEEEECTTSCSSTTGGGEEEE
T ss_pred             CCCccEEEEEEEeCCCCCCcCCCceeEEEEEECCEEEEEcCCC----CcccceEEEcCCcEEEECCCcccCCCCccEEEE
Confidence            3577899999999854    36999999999999999999987    77899999999976543221  12355699999


Q ss_pred             EeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhcCC
Q 035610           98 SRGG-YTMYSVADTEKEKGERINSIGRAIVQHSR  130 (144)
Q Consensus        98 ~~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~~~~  130 (144)
                      .+++ +.|+|+|+|.+++++||.+|+.++.....
T Consensus        90 ~~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~~  123 (148)
T 1u5f_A           90 CAPDKRIYQFTAASPKDAEEWVQQLKFILQDLGS  123 (148)
T ss_dssp             ECTTSCEEEEECSSHHHHHHHHHHHHHHCC----
T ss_pred             ECCCCcEEEEECCCHHHHHHHHHHHHHHHHHhcC
Confidence            9986 89999999999999999999999866544

>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.88  E-value=1.9e-21  Score=126.91  Aligned_cols=99  Identities=24%  Similarity=0.409  Sum_probs=83.1

Q ss_pred             CCceEEEEEeeC-CCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeec-cccCCCCceEEEEe-CCe
Q 035610           26 QPGAIGPANKQG-DYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA-EDVLNKPFAFEHSR-GGY  102 (144)
Q Consensus        26 ~~~~~G~L~k~~-~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~-~~~~~~~~~f~I~~-~~~  102 (144)
                      ...++|||.|++ ...+.|++|||+|.++.|+||+++.    +..+.+.|+|.++...... .+...++++|.|.+ ..+
T Consensus        10 ~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r   85 (117)
T 2d9y_A           10 PVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEK----EESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVR   85 (117)
T ss_dssp             CCCEEEEEEEECTTSSSCEEEEEEEEETTEEEEESSTT----CCSCCEEEECSSCEEEECCTTTTCCCSSEEEEECSSSC
T ss_pred             CeeEEEEEEEeCCCCCCCceEEEEEECCCEEEEECCCC----CCCcCCEEEeCCeEEEEcCccccCCCccEEEEEcCCCc
Confidence            456999999998 4778999999999999999999987    7789999999997643222 23356789999975 468


Q ss_pred             EEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          103 TMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       103 ~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      .|+|+|+|.+++++||.+|+.++...
T Consensus        86 ~~~l~a~s~~e~~~Wi~al~~~~~~~  111 (117)
T 2d9y_A           86 TYFFSAESPEEQEAWIQAMGEAARVQ  111 (117)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHTTCCT
T ss_pred             EEEEEcCCHHHHHHHHHHHHHHHhhc
Confidence            99999999999999999999987533

>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A

Probab=99.88  E-value=7.7e-22  Score=126.35  Aligned_cols=94  Identities=18%  Similarity=0.323  Sum_probs=78.2

Q ss_pred             eEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC-CeEEEEE
Q 035610           29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG-GYTMYSV  107 (144)
Q Consensus        29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~-~~~~~l~  107 (144)
                      ++|||.|+|+..+.|++|||||.++.|+||+++.+  ....++|.|+|.++... ...   ..+++|.|.++ +++|+|+
T Consensus         1 ~eG~L~K~g~~~k~Wk~R~fvL~~~~L~Yy~~~~~--~~~~~~g~i~L~~~~v~-~~~---~~~~~F~i~~~~~r~~~l~   74 (103)
T 3rcp_A            1 MEGVLYKWTNYLTGWQPRWFVLDNGILSYYDSQDD--VCKGSKGSIKMAVCEIK-VHS---ADNTRMELIIPGEQHFYMK   74 (103)
T ss_dssp             CEEEEEEECCTTTCEEEEEEEEETTEEEEESSCC-----CCCSCEEEGGGCEEE-CCT---TCSSEEEEEETTTEEEEEE
T ss_pred             CceEEEEccCCCCCeeceEEEEECCEEEEEecCCc--ccCCcccEEEeeeeEEE-EcC---CCCceEEEEeCCCCEEEEE
Confidence            48999999998999999999999999999999861  11358999999885543 222   24789999987 7999999


Q ss_pred             cCCHHHHHHHHHHHHHHHHhc
Q 035610          108 ADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       108 a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      |+|.+|+++|+.+|+.|+...
T Consensus        75 a~s~~e~~~Wi~al~~a~~~~   95 (103)
T 3rcp_A           75 AVNAAERQRWLVALGSSKASL   95 (103)
T ss_dssp             CSSHHHHHHHHHHHHTTSCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHhc
Confidence            999999999999999987543

>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}

Probab=99.88  E-value=1.3e-21  Score=135.67  Aligned_cols=107  Identities=13%  Similarity=0.193  Sum_probs=86.6

Q ss_pred             ecCCceEEEEEeeCCC-----CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-----cCCCCc
Q 035610           24 WSQPGAIGPANKQGDY-----IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-----VLNKPF   93 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~-----~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-----~~~~~~   93 (144)
                      ..+.+++|||.|++..     .++|++|||||+++.|.||+++.   ....+.|.|+|..+..|....+     .....+
T Consensus        12 ~~~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~---~~~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~   88 (164)
T 2lul_A           12 NFNTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRA---EKKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKY   88 (164)
T ss_dssp             CSSEEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCS---SSCCCCCEEEGGGCCEEEECCCCSSSCCSSSCS
T ss_pred             CCCeeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccC---cccccccEEEEeeeEEEEeccccccCcccccce
Confidence            3467799999999742     35799999999999999999875   1345789999999877655432     134568


Q ss_pred             eEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcCCCCC
Q 035610           94 AFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVT  133 (144)
Q Consensus        94 ~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~~~~~~  133 (144)
                      +|.|.+++++|+|+|+|++|+++||++|++++........
T Consensus        89 ~f~i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i~~n~~~~~  128 (164)
T 2lul_A           89 PFQVVHDANTLYIFAPSPQSRDLWVKKLKEEIKNNNNIMI  128 (164)
T ss_dssp             EEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTTCSCCCS
T ss_pred             eEEEecCCcEEEEECCCHHHHHHHHHHHHHHHHHChhhhh
Confidence            9999999999999999999999999999999976554433

>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*

Probab=99.88  E-value=1.4e-21  Score=128.63  Aligned_cols=98  Identities=24%  Similarity=0.348  Sum_probs=82.5

Q ss_pred             CceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecc-ccCCCCceEEEEeCC-eE
Q 035610           27 PGAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE-DVLNKPFAFEHSRGG-YT  103 (144)
Q Consensus        27 ~~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~-~~~~~~~~f~I~~~~-~~  103 (144)
                      +.++|||.|+++ ..+.|++|||+|.++.|+||+++.    +..+.+.|+|.++....... ...+++++|.|.+++ +.
T Consensus        11 ~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~----~~~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~~r~   86 (123)
T 1upq_A           11 VHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSR----EESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRT   86 (123)
T ss_dssp             EEEEEEEEEECSSSSCCEEEEEEEEETTEEEEESSTT----CCSCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTSCC
T ss_pred             ceEEEEEEeeCCCCCCCceeEEEEEeCCEEEEECCCC----CcccceEEECCCCEEEECCCCccCCCcEEEEEECCCCeE
Confidence            458999999985 778999999999999999999987    78899999999965433222 224578999999876 89


Q ss_pred             EEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          104 MYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       104 ~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      |+|+|+|.+++++|+.+|+.++...
T Consensus        87 ~~l~a~s~~e~~~Wi~al~~a~~~~  111 (123)
T 1upq_A           87 YVLAADTLEDLRGWLRALGRASRAE  111 (123)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHHC--
T ss_pred             EEEECCCHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999998543

>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.88  E-value=2.7e-21  Score=126.26  Aligned_cols=97  Identities=20%  Similarity=0.145  Sum_probs=80.9

Q ss_pred             cCCceEEEEEeeCCCC-CCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeE
Q 035610           25 SQPGAIGPANKQGDYI-KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYT  103 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~~-~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~  103 (144)
                      ..+.++|||.|++... +.|++|||||+++.|.||+++.     ..+.+.+.+..+. +...+   .++++|.|.++++.
T Consensus         8 ~~~~~~G~L~K~~~~~~k~WkkR~fvL~~~~L~yyk~~~-----~~~~~~i~l~~~~-v~~~~---~~~~~F~I~~~~r~   78 (114)
T 2da0_A            8 YGSEKKGYLLKKSDGIRKVWQRRKCSVKNGILTISHATS-----NRQPAKLNLLTCQ-VKPNA---EDKKSFDLISHNRT   78 (114)
T ss_dssp             CCSCEEEEEEEECSSSCCCEEEEEEEEETTEEEECCSSC-----CSCCEEEETTTSE-EEECS---SSSSCEEEEETTEE
T ss_pred             CCccEEEEEEEeCCCCCCCceeEEEEEeCCEEEEEcCCC-----CCCCCEEEeeeeE-EEECC---CCCCEEEEEcCCcE
Confidence            4677999999998756 8999999999999999999975     3556667776654 33222   45689999999999


Q ss_pred             EEEEcCCHHHHHHHHHHHHHHHHhcCC
Q 035610          104 MYSVADTEKEKGERINSIGRAIVQHSR  130 (144)
Q Consensus       104 ~~l~a~s~~e~~~Wi~al~~ai~~~~~  130 (144)
                      |+|+|+|.+|+++||.+|+.++.....
T Consensus        79 ~~l~a~s~~e~~~Wi~al~~~~~~~~~  105 (114)
T 2da0_A           79 YHFQAEDEQDYVAWISVLTNSKEEALT  105 (114)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999877644

>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.87  E-value=1.7e-21  Score=132.74  Aligned_cols=99  Identities=24%  Similarity=0.293  Sum_probs=83.7

Q ss_pred             ecCCceEEEEEeeC------CCCCCceeEEEEEeCC-----eEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCC
Q 035610           24 WSQPGAIGPANKQG------DYIKTWLRRWFILKQG-----EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKP   92 (144)
Q Consensus        24 ~~~~~~~G~L~k~~------~~~~~w~~R~fvL~~~-----~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~   92 (144)
                      ...+.++|||.|++      ...+.|++|||||.++     .|.||+++.   ....+.+.|+|.+|..+....  ..++
T Consensus        15 ~~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~---~~~~~~g~I~L~~~~~~~~~~--~~~~   89 (150)
T 1wg7_A           15 KGGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEK---ISKEPKGSIFLDSCMGVVQNN--KVRR   89 (150)
T ss_dssp             SCCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSC---CSSCCSEEECTTTCCEECCCC--SSCT
T ss_pred             CCCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCC---CCCCcCcEEecccCEEEecCC--CCCc
Confidence            45778999999998      3457999999999997     999999874   145799999999987764322  3678


Q ss_pred             ceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           93 FAFEHSRGG-YTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        93 ~~f~I~~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      ++|.|.+++ +.|+|+|++.+++++||.+|+.++..
T Consensus        90 ~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~~  125 (150)
T 1wg7_A           90 FAFELKMQDKSSYLLAADSEVEMEEWITILNKILQL  125 (150)
T ss_dssp             TEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Confidence            999999985 89999999999999999999998764

>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}

Probab=99.87  E-value=6.5e-22  Score=132.21  Aligned_cols=102  Identities=19%  Similarity=0.278  Sum_probs=82.3

Q ss_pred             cCCceEEEEEee--CCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEE--Eeeccc-cCCCCceEEEEe
Q 035610           25 SQPGAIGPANKQ--GDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLT--VKCAED-VLNKPFAFEHSR   99 (144)
Q Consensus        25 ~~~~~~G~L~k~--~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~--v~~~~~-~~~~~~~f~I~~   99 (144)
                      ..+.++|||.|+  ++..+.|++|||||+++.|+||+++. ......|.|.|+|.+|..  |...++ ...++++|.|.+
T Consensus         3 ~~v~~~G~L~K~~~~~~~~~WkrRwfvL~~~~L~yyk~~~-d~~~~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~~   81 (134)
T 2y7b_A            3 SSVEERGFLTIFEDVSGFGAWHRRWCVLSGNCISYWTYPD-DEKRKNPIGRINLANCTSRQIEPANREFCARRNTFELIT   81 (134)
T ss_dssp             CCCCEEEEEEEEEEETTEEEEEEEEEEEETTEEEEESSHH-HHTTSCCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEEE
T ss_pred             CCceEEeeEEEEcCCCCCCCcEEEEEEEECCEEEEECCCC-cccccCceEEEEhhhCccccccccchhhccCCCEEEEEe
Confidence            357799999999  77788999999999999999999543 011478999999999764  444432 246789999986


Q ss_pred             --CC------------------eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610          100 --GG------------------YTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       100 --~~------------------~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                        +.                  +.|+|+|+|.+|+++||.+|+.++..
T Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~~  129 (134)
T 2y7b_A           82 VRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLVD  129 (134)
T ss_dssp             EEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             cCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence              32                  47999999999999999999998864

>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.87  E-value=9.1e-21  Score=124.61  Aligned_cols=97  Identities=24%  Similarity=0.399  Sum_probs=81.4

Q ss_pred             CCceEEEEEeeC-CCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEee-ccccCCCCceEEEEeC-Ce
Q 035610           26 QPGAIGPANKQG-DYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKC-AEDVLNKPFAFEHSRG-GY  102 (144)
Q Consensus        26 ~~~~~G~L~k~~-~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~-~~~~~~~~~~f~I~~~-~~  102 (144)
                      ...++|||.|++ ...+.|++|||||.++.|+||+++.    +..+.+.|+|.++..... ..+...++++|.|.++ .+
T Consensus        21 ~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r   96 (122)
T 2yry_A           21 PVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEK----EESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVR   96 (122)
T ss_dssp             CEEEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTT----CCSCCEEEESTTCCCEECCTTCSCSSSSEEEEECSSSC
T ss_pred             CccEEEEEEEECCCCCCCcEEEEEEEeCCEEEEECCCC----CCCcccEEEcCCCEEEEcCccccCCcccEEEEecCCCc
Confidence            346899999997 4778999999999999999999987    778999999999753222 1223467899999754 68


Q ss_pred             EEEEEcCCHHHHHHHHHHHHHHHH
Q 035610          103 TMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus       103 ~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      .|+|+|+|.+++++||.+|+.|+.
T Consensus        97 ~~~l~a~s~~e~~~Wi~al~~a~~  120 (122)
T 2yry_A           97 TYFFSAESPEEQEAWIQAMGEAAR  120 (122)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHHHC
T ss_pred             EEEEEcCCHHHHHHHHHHHHHHHh
Confidence            999999999999999999999873

>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*

Probab=99.87  E-value=2.3e-21  Score=129.47  Aligned_cols=102  Identities=14%  Similarity=0.218  Sum_probs=80.5

Q ss_pred             CCceEEEEEee----CC--CCCCceeEEEEEeCCeEEEEecCCCCC-------CCCCcceEEeCCceEEEeeccccCCCC
Q 035610           26 QPGAIGPANKQ----GD--YIKTWLRRWFILKQGEHFWFKDSHNIT-------RGSTPRGFIPVGTCLTVKCAEDVLNKP   92 (144)
Q Consensus        26 ~~~~~G~L~k~----~~--~~~~w~~R~fvL~~~~l~y~k~~~~~~-------~~~~~~~~i~L~~~~~v~~~~~~~~~~   92 (144)
                      .+.++|||.|+    ++  ..+.|++|||||+++.|+||+++.+..       .+..|.+.|+|.+|.... +.+...++
T Consensus        11 ~~~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~~-~~~~~kr~   89 (129)
T 2p0d_A           11 EVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAH-GRHLSSRR   89 (129)
T ss_dssp             SEEEEEEEEEEEEEETTEECCCCCEEEEEEEESSEEEEESCC--------------CCSEEEECTTCEEEE-CTTSCSSS
T ss_pred             ceeEEEEEEEeeeccCCCcCCCCceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCCcEEEE-CCCCCCCC
Confidence            56699999985    33  238999999999999999999983100       145789999999976543 44435778


Q ss_pred             ceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           93 FAFEHSRGG-YTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        93 ~~f~I~~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      |+|.|.+++ +.|+|+|+|.+|+++||.+|+.+|.+.
T Consensus        90 ~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~~  126 (129)
T 2p0d_A           90 NVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERL  126 (129)
T ss_dssp             SEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence            999999875 689999999999999999999998754

>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.87  E-value=6.3e-22  Score=130.32  Aligned_cols=100  Identities=18%  Similarity=0.332  Sum_probs=82.5

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEe--CCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILK--QGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG  101 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~--~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~  101 (144)
                      ...+.++|||.|+++..+.|++|||||.  ++.|.||+++.+  ....++|.|+|.++. |...+   ..+++|.|.+++
T Consensus         5 ~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~~~L~Yyk~~~~--~~~~~~g~I~L~~~~-v~~~~---~~~~~F~i~~~~   78 (120)
T 2d9x_A            5 SSGENVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQS--RNQKPRGTLQLAGAV-ISPSD---EDSHTFTVNAAS   78 (120)
T ss_dssp             CSCCCCEEEEEEEEETTTEEEEEEEEECTTTCEEEEESSGGG--SSSCCSEEEECTTCC-EECCS---SSSSCEEECCSS
T ss_pred             CCCCcEEEEEEecCCCCCCceEEEEEEECCCCEEEEEecCcc--cCCCccceEEcceEE-EEecC---CCCCEEEEEcCC
Confidence            3467799999999988899999999999  579999998750  023789999999975 32222   456999999886


Q ss_pred             -eEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610          102 -YTMYSVADTEKEKGERINSIGRAIVQHS  129 (144)
Q Consensus       102 -~~~~l~a~s~~e~~~Wi~al~~ai~~~~  129 (144)
                       +.|+|+|+|.+|+++||.+|+.++....
T Consensus        79 ~r~~~l~a~s~~e~~~Wi~al~~~~~~~~  107 (120)
T 2d9x_A           79 GEQYKLRATDAKERQHWVSRLQICTQHHT  107 (120)
T ss_dssp             SCCEEECCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHHHHHhh
Confidence             9999999999999999999999887653

>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A

Probab=99.86  E-value=8.6e-22  Score=130.30  Aligned_cols=100  Identities=22%  Similarity=0.298  Sum_probs=81.1

Q ss_pred             cCCceEEEEEeeCCCCCCceeEEEEEeC-CeEEEEecCCCCCCCCCcceEEeCCceEEEee--ccccCCCCceEEEEe--
Q 035610           25 SQPGAIGPANKQGDYIKTWLRRWFILKQ-GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKC--AEDVLNKPFAFEHSR--   99 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~-~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~--~~~~~~~~~~f~I~~--   99 (144)
                      ..+.++|||.|+|+..+.|++|||||++ +.|.||+++.    +..+.+.|+|..+..+..  ......++++|.|.+  
T Consensus         6 ~~~~~~G~L~K~g~~~k~WkkRwfvL~~~~~L~yy~~~~----~~~~~g~i~L~~~~~~~~~~~~~~~~~~~~F~I~~~~   81 (125)
T 1unq_A            6 VAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERP----QDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQ   81 (125)
T ss_dssp             GCEEEEEEEEEECSSSCCEEEEEEEEETTSEEEEESSCC----CSHHHHTSCSEEEECTTCEEEEECSSSTTEEEEEEEE
T ss_pred             CCeeEEeeEEeccCCccCccCcEEEEecCCEEEEEeCCC----CCCCCceeEccceeEEeeeecccccCCCCEEEEEecC
Confidence            3467999999999888999999999995 6999999987    667788888887653211  111236789999985  


Q ss_pred             --CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          100 --GGYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       100 --~~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                        +.+.|+|+|+|.+|+++||.+|+.++...
T Consensus        82 ~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~  112 (125)
T 1unq_A           82 WTTVIERTFHVETPEEREEWTTAIQTVADGL  112 (125)
T ss_dssp             TTEEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCceeEEEEeCCHHHHHHHHHHHHHHHhhc
Confidence              46789999999999999999999988654

>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A

Probab=99.86  E-value=7e-21  Score=136.93  Aligned_cols=99  Identities=13%  Similarity=0.162  Sum_probs=85.1

Q ss_pred             cCCceEEEEEeeCC----CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecc--ccCCCCceEEEE
Q 035610           25 SQPGAIGPANKQGD----YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE--DVLNKPFAFEHS   98 (144)
Q Consensus        25 ~~~~~~G~L~k~~~----~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~--~~~~~~~~f~I~   98 (144)
                      .++.++|||.|+++    ..+.|++|||||+++.|+||+++.    ...+.|.|+|.++..+....  ....++++|.|.
T Consensus       104 ~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~~~L~Yyk~~~----~~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~  179 (211)
T 1u5e_A          104 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDK----DKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEIC  179 (211)
T ss_dssp             SSEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTT----CSSCSEEEECTTCEEEECGGGCSSTTGGGEEEEE
T ss_pred             CCccEEEEEEEECCCCCcCCCCcEeEEEEEECCEEEEEcCCC----CccceEEEEeCCcEEEEcCCccccCCCCCEEEEE
Confidence            35779999999975    467999999999999999999987    67899999999987765432  223567999999


Q ss_pred             eCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           99 RGG-YTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        99 ~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      +++ +.|+|+|+|.+++++||.+|+.++..
T Consensus       180 t~~~r~~~l~A~s~~e~~~Wi~aL~~ai~~  209 (211)
T 1u5e_A          180 APDKRIYQFTAASPKDAEEWVQQLKFILQD  209 (211)
T ss_dssp             CSSSCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence            885 99999999999999999999999864

>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.85  E-value=6.4e-21  Score=125.91  Aligned_cols=103  Identities=16%  Similarity=0.214  Sum_probs=79.4

Q ss_pred             cCCceEEEEEeeCCC--------CCCceeEEEEEeCCeEEEEecCCCCCCCC--CcceEEeCCceEEEeeccccCCCCce
Q 035610           25 SQPGAIGPANKQGDY--------IKTWLRRWFILKQGEHFWFKDSHNITRGS--TPRGFIPVGTCLTVKCAEDVLNKPFA   94 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~--------~~~w~~R~fvL~~~~l~y~k~~~~~~~~~--~~~~~i~L~~~~~v~~~~~~~~~~~~   94 (144)
                      ....++|||.|++..        .+.|++|||||+++.|+||+++.+.....  .+...|+|.++.. ..+.+...++|+
T Consensus         6 ~~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~-~~~~~~~~r~~~   84 (123)
T 1wjm_A            6 SGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQG-SVAFDYRKRKHV   84 (123)
T ss_dssp             CCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCEE-EECTTCSSCSSE
T ss_pred             CCeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEEcccccccCcccCCCceEEccCcEE-eecccccCCCCE
Confidence            356699999998643        78999999999999999999875111111  1345688887544 333333578899


Q ss_pred             EEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           95 FEHSRGG-YTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        95 f~I~~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      |.|.+++ +.|+|+|+|.+|+++||.+|+.++...
T Consensus        85 F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~~~  119 (123)
T 1wjm_A           85 FKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIASG  119 (123)
T ss_dssp             EEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHhcc
Confidence            9999776 899999999999999999999998654

>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.85  E-value=3.5e-21  Score=124.31  Aligned_cols=96  Identities=14%  Similarity=0.167  Sum_probs=77.9

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC-Ce
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG-GY  102 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~-~~  102 (144)
                      ..++.++|||.|+  ..+.|++|||||+++.|+||+++.   ....+.+.|.|.+|. |....+ ..++++|.|.++ .+
T Consensus         5 ~~~~~~~G~L~K~--~~k~Wk~RwfvL~~~~L~yyk~~~---~~~~~~~~i~l~~~~-v~~~~~-~~~~~~F~i~~~~~r   77 (107)
T 2cof_A            5 SSGLETSSYLNVL--VNSQWKSRWCSVRDNHLHFYQDRN---RSKVAQQPLSLVGCE-VVPDPS-PDHLYSFRILHKGEE   77 (107)
T ss_dssp             CCCCTTCCEEEEE--ETTEEEEEEEEECSSCEEEECSST---TCSEEEEEECTTTCE-EECCCB-TTBSCEEEEEETTEE
T ss_pred             CCCCcEeEEEEEe--cCCCcceEEEEEECCEEEEEeCCc---ccCCCeeEEeccceE-EEECCC-CCCCeEEEEEeCCCe
Confidence            3567899999999  678999999999999999999885   123456677777753 333333 467899999998 78


Q ss_pred             EEEEEcCCHHHHHHHHHHHHHHHH
Q 035610          103 TMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus       103 ~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      .|+|+|+|.+|+++||.+|+.++.
T Consensus        78 ~~~l~A~s~~e~~~Wi~al~~~~~  101 (107)
T 2cof_A           78 LAKLEAKSSEEMGHWLGLLLSESG  101 (107)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHHSS
T ss_pred             EEEEEcCCHHHHHHHHHHHHHHHc
Confidence            899999999999999999999763

>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A

Probab=99.84  E-value=7.1e-21  Score=122.15  Aligned_cols=95  Identities=16%  Similarity=0.196  Sum_probs=74.8

Q ss_pred             eEEEEEeeC--------CCCCCceeEEEEEeCCeEEEEecCCCC--CCCCCcceEEeCCceEEEeeccccCCCCceEEEE
Q 035610           29 AIGPANKQG--------DYIKTWLRRWFILKQGEHFWFKDSHNI--TRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHS   98 (144)
Q Consensus        29 ~~G~L~k~~--------~~~~~w~~R~fvL~~~~l~y~k~~~~~--~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~   98 (144)
                      ++|||.|++        ...+.|++|||||+++.|+||+++.+.  .....+...|+|.++... ...+...++++|.|.
T Consensus         1 ~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~-~~~~~~~~~~~F~i~   79 (106)
T 1btn_A            1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICE-VALDYKKKKHVFKLR   79 (106)
T ss_dssp             CEEEEEEEEEECSTTCBCSCCCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTCEEE-ECSSCCSSSSEEEEE
T ss_pred             CccEEEEEEEEeCCCccCCCCChhEEEEEEECCEEEEEeCCcccccCCCCCCcceEECCCCEEE-EcccccCCccEEEEE
Confidence            489999998        677899999999999999999986410  001235677888886543 233334678999999


Q ss_pred             eCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 035610           99 RGG-YTMYSVADTEKEKGERINSIGRA  124 (144)
Q Consensus        99 ~~~-~~~~l~a~s~~e~~~Wi~al~~a  124 (144)
                      +++ ++|+|+|+|.+|+++||.+|+.|
T Consensus        80 ~~~~~~~~~~A~s~~e~~~Wi~ai~~A  106 (106)
T 1btn_A           80 LSDGNEYLFQAKDDEEMNTWIQAISSA  106 (106)
T ss_dssp             CTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred             ecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence            765 89999999999999999999874

>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A

Probab=99.84  E-value=2e-20  Score=129.70  Aligned_cols=99  Identities=12%  Similarity=0.222  Sum_probs=67.7

Q ss_pred             CCceEEEEE----------eeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEE-EeeccccCCCCce
Q 035610           26 QPGAIGPAN----------KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLT-VKCAEDVLNKPFA   94 (144)
Q Consensus        26 ~~~~~G~L~----------k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~-v~~~~~~~~~~~~   94 (144)
                      ++.++|||.          |+|+..+.|++|||||+++.|+||+++.+  ....+.+.|+|..... +....+...++++
T Consensus         2 dv~~eG~L~~k~~~~~~gkK~g~~~k~WkkRwfvL~~~~L~yyk~~~~--~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~   79 (168)
T 2j59_M            2 DAAKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKRE--QTTPSEEEQPISVNACLIDISYSETKRKNV   79 (168)
T ss_dssp             -CCEEEEEEEEECC------------CCEEEEEEEETTEEEEESCTTC--C--------CEECSSCEEEECSSSCSCSSE
T ss_pred             CCcEEEEEeeeeecccCCcccCCCCCCceEEEEEEeCCEEEEEECCcc--cccccCCceEecccceEEEeccccCCCCCE
Confidence            467999999          56667889999999999999999999850  0245778877766222 2122223467899


Q ss_pred             EEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610           95 FEHSRGGYTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus        95 f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      |.|.++++.|+|+|++.+|+++||.+|+.++.
T Consensus        80 F~I~t~~r~~~l~A~s~~e~~~Wi~ai~~~~~  111 (168)
T 2j59_M           80 FRLTTSDCECLFQAEDRDDMLAWIKTIQESSN  111 (168)
T ss_dssp             EEEECSSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred             EEEEeCCceEEEEcCCHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999998763

>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}

Probab=99.84  E-value=2.6e-20  Score=135.41  Aligned_cols=97  Identities=15%  Similarity=0.316  Sum_probs=85.9

Q ss_pred             ecCCceEEEEEeeCCCC-----CCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEE
Q 035610           24 WSQPGAIGPANKQGDYI-----KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHS   98 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~-----~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~   98 (144)
                      ..++.++|||.|+++..     +.|++|||||.++.|.||+++.    +..+.|.|+|.++..+....   .++++|.|.
T Consensus        55 ~~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~----~~~~~g~I~L~~~~~v~~~~---~k~~~F~I~  127 (228)
T 3tfm_A           55 KQEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDS----EEKLKGTVEVRSAKEIIDNT---NKENGIDII  127 (228)
T ss_dssp             CCCSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTT----CCSEEEEEEGGGCSEEEEET---TTTSEEEEE
T ss_pred             CCCcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCC----CcceeEEEEcCCCEEeccCC---CCCcEEEEE
Confidence            34778999999998654     8999999999999999999987    67899999999987765432   567999999


Q ss_pred             eCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           99 RGGYTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        99 ~~~~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      ++++.|+|+|+|.+|+++|+.+|+.++..
T Consensus       128 t~~r~~~l~A~s~~e~~~Wv~aL~~~i~~  156 (228)
T 3tfm_A          128 MADRTFHLIAESPEDASQWFSVLSQVHSS  156 (228)
T ss_dssp             CSSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred             cCCcEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999863

>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*

Probab=99.83  E-value=1.1e-19  Score=139.36  Aligned_cols=99  Identities=32%  Similarity=0.493  Sum_probs=86.1

Q ss_pred             eecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC--
Q 035610           23 FWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG--  100 (144)
Q Consensus        23 ~~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~--  100 (144)
                      .+.++.++|||.|+|+..+.|++|||||+++.|+||+++.    +..+.|.|+|.++.. ...++ ..++++|.|.++  
T Consensus       209 ~f~~~~k~G~L~K~g~~~k~WkkRwFVL~~~~L~Yyk~~~----~~~p~G~I~L~~~~v-~~~~~-~~~~~~F~I~~~~~  282 (347)
T 2r09_A          209 TFFNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTT----DKEPRGIIPLENLSI-REVED-PRKPNCFELYNPSH  282 (347)
T ss_dssp             CCCCCCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTT----CSSCSEEEECTTCEE-EEECC-SSCSSEEEEECSSS
T ss_pred             cccccccCCeeEecCCCcccceeEEEEEcCCEEEEEcCCC----ccCCcEEEEcCCeEE-EEccC-CCCCCEEEEEeCCc
Confidence            4567899999999998889999999999999999999987    678999999999764 33333 478899999865  


Q ss_pred             --------------------CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610          101 --------------------GYTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       101 --------------------~~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                                          .+.|+|+|+|.+|+++||.+|+.++..
T Consensus       283 ~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~~  329 (347)
T 2r09_A          283 KGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISR  329 (347)
T ss_dssp             TTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHHC
T ss_pred             cccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhc
Confidence                                378999999999999999999998854

>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*

Probab=99.83  E-value=8e-20  Score=141.90  Aligned_cols=101  Identities=17%  Similarity=0.228  Sum_probs=84.7

Q ss_pred             ecCCceEEEEEeeCCCC-CCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEE---ee-ccccC-C--CCceE
Q 035610           24 WSQPGAIGPANKQGDYI-KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTV---KC-AEDVL-N--KPFAF   95 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~-~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v---~~-~~~~~-~--~~~~f   95 (144)
                      ..+++++|||.|+|+.. +.|++|||||+++.|+||+++.    +..+.|.|+|..+..+   .. ..... .  .+++|
T Consensus       266 ~~~~~k~G~L~K~g~~~~k~WKkRwFVL~~~~L~YYk~~~----d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~F  341 (386)
T 3lju_X          266 SRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPL----DAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGI  341 (386)
T ss_dssp             SCCCSEEEEEEECCTTSCSCCEEEEEEEETTEEEEESSTT----CSBCSEEEECCCGGGTCEEEESCCTTCCSCCSCEEE
T ss_pred             ccccceeeeEEEECCCCCCCCcccEEEEECCEEEEEecCC----CcccceEEEeecceeeeeecccCCccccccCCCcEE
Confidence            34678999999999877 8999999999999999999987    7789999999775432   22 12111 1  26999


Q ss_pred             EEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           96 EHSRGGYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        96 ~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      .|.+++++|+|+|+|++|+++||.+|+.++.++
T Consensus       342 ~I~t~~rty~l~A~s~~e~~~Wi~aL~~~i~~p  374 (386)
T 3lju_X          342 TIVTPDRKFLFACETESDQREWVAAFQKAVDRP  374 (386)
T ss_dssp             EEECSSCEEEEEESSHHHHHHHHHHHHHHHHSC
T ss_pred             EEEeCCeEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999764

>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}

Probab=99.82  E-value=2e-19  Score=119.62  Aligned_cols=101  Identities=15%  Similarity=0.109  Sum_probs=70.1

Q ss_pred             CCceEEEEEeeCC--CCCCceeEEEEEeC-CeEEEEecCCCCCCCCCcceEEeCCceEEEeec-----------------
Q 035610           26 QPGAIGPANKQGD--YIKTWLRRWFILKQ-GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA-----------------   85 (144)
Q Consensus        26 ~~~~~G~L~k~~~--~~~~w~~R~fvL~~-~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~-----------------   85 (144)
                      .|.++|||.|+++  ..+.|++|||||.+ +.|+||++..+. ......+.|+|..+....+.                 
T Consensus         3 ~~~k~G~L~K~~g~~~~k~WkkRwFvL~~~~~l~Y~~~~~d~-~~~~~~~~i~l~~~~~~~~~~~i~l~~~~~~~~~~~~   81 (128)
T 2rlo_A            3 IPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDY-IHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASGS   81 (128)
T ss_dssp             CEEEEEEEEEECSCSTTCCEEEEEEEEETTTEEEEESSHHHH-HHTCSCEEEESSSCEEECSSCCCCCSSCCCSCCSCCC
T ss_pred             cceeEEEEEEecCCCccCCccEEEEEEeCCCEEEEecchhhh-ccccCCCeeeeeeeEEecCCCcccccccccccccccc
Confidence            3579999999943  67899999999996 678888652100 00111234555443221110                 


Q ss_pred             -cccCCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           86 -EDVLNKPFAFEHSRGG-YTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        86 -~~~~~~~~~f~I~~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                       .....++++|.|.+++ ++|+|+|+|.+|+++||++|+.++..
T Consensus        82 ~~~~~~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~~  125 (128)
T 2rlo_A           82 AGQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILA  125 (128)
T ss_dssp             CSSCCCCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred             ccccccCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence             0011467999999887 89999999999999999999998854

>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*

Probab=99.82  E-value=7.9e-20  Score=135.44  Aligned_cols=96  Identities=18%  Similarity=0.317  Sum_probs=81.2

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCC-------eEEEEecCCCCCCC-----CCcceEEeCCceEEEeeccccCCC
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQG-------EHFWFKDSHNITRG-----STPRGFIPVGTCLTVKCAEDVLNK   91 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~-------~l~y~k~~~~~~~~-----~~~~~~i~L~~~~~v~~~~~~~~~   91 (144)
                      ..++.++|||.|+    +.|++|||||+++       .|.||+++.    +     ..+++.|+|..|..|....+ ..+
T Consensus         7 ~~~v~k~G~L~K~----K~WkkRwFVL~~~~~~G~~~~L~YYk~~~----~~~~~~~~p~g~I~L~~~~~V~~~~~-~~~   77 (264)
T 1qqg_A            7 FSDVRKVGYLRKP----KSMHKRFFVLRAASEAGGPARLEYYENEK----KWRHKSSAPKRSIPLESCFNINKRAD-SKN   77 (264)
T ss_dssp             --CEEEEEEEECT----TTCCEEEEEEECCBTTTBSSEEEEESSHH----HHHTTCSCCSEEEEGGGEEEEEEECC-SSC
T ss_pred             CCCccEEEEEEEC----CCCEeEEEEEECCCCCCCCCEEEEECCCc----cccccccCcceEEEeeceEEEEeccC-CCC
Confidence            3456799999999    7999999999998       999999876    4     47999999999887765544 467


Q ss_pred             CceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           92 PFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        92 ~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      +++|.|.+++++|+|+|+|.+|+++||.+|+.++...
T Consensus        78 ~~~F~I~t~~rty~l~A~se~e~~~Wi~aL~~~~~~~  114 (264)
T 1qqg_A           78 KHLVALYTRDEHFAIAADSEAEQDSWYQALLQLHNRA  114 (264)
T ss_dssp             SSEEEEEESSCEEEEECSSHHHHHHHHHHHHHHC---
T ss_pred             CcEEEEEECCEEEEEEeCCHHHHHHHHHHHHHHHHhc
Confidence            8999999999999999999999999999999987654

>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A

Probab=99.81  E-value=2e-19  Score=133.20  Aligned_cols=103  Identities=16%  Similarity=0.192  Sum_probs=81.4

Q ss_pred             cCCceEEEEE--------eeCCC----CCCceeEEEEEeCCeEEEEecCCCC--CCCCCcceEEeCCceEEEeeccccCC
Q 035610           25 SQPGAIGPAN--------KQGDY----IKTWLRRWFILKQGEHFWFKDSHNI--TRGSTPRGFIPVGTCLTVKCAEDVLN   90 (144)
Q Consensus        25 ~~~~~~G~L~--------k~~~~----~~~w~~R~fvL~~~~l~y~k~~~~~--~~~~~~~~~i~L~~~~~v~~~~~~~~   90 (144)
                      ..+.++|||.        |+|+.    .+.|++|||||+++.|+||+++...  ..+..+.+.|+|.++.... ..+...
T Consensus         9 ~~v~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~~~~v~~-~~~~~k   87 (263)
T 3a8p_A            9 GVVRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAEDSIVQS-VPEHPK   87 (263)
T ss_dssp             -CEEEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEETTEEEEESSCCC------CCCSEEEECTTCEEEE-CTTCSS
T ss_pred             CCeEEEEEeeecccccccCCCCccCccCCCceEEEEEEcCCEEEEEecCcccccccccCccceEEcCCcEEEE-CCcCCC
Confidence            3457999999        55655    7899999999999999999985210  0156789999999865543 333346


Q ss_pred             CCceEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           91 KPFAFEHSR-GGYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        91 ~~~~f~I~~-~~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      ++|+|.|.+ +++.|+|+|+|.+++++||.+|+.++...
T Consensus        88 k~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~  126 (263)
T 3a8p_A           88 KEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACASL  126 (263)
T ss_dssp             CSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence            789999998 67899999999999999999999988654

>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1

Probab=99.81  E-value=4.9e-20  Score=121.64  Aligned_cols=102  Identities=14%  Similarity=0.185  Sum_probs=78.3

Q ss_pred             cCCceEEEEEeeCC--------CCCCceeEEEEEeCCeEEEEecCCCCCC----CCCcceEEeCCceEEEeeccccCCCC
Q 035610           25 SQPGAIGPANKQGD--------YIKTWLRRWFILKQGEHFWFKDSHNITR----GSTPRGFIPVGTCLTVKCAEDVLNKP   92 (144)
Q Consensus        25 ~~~~~~G~L~k~~~--------~~~~w~~R~fvL~~~~l~y~k~~~~~~~----~~~~~~~i~L~~~~~v~~~~~~~~~~   92 (144)
                      ..+.++|||.++..        ..+.|++|||||+++.|+||+++.+...    ...+.+.|+|.++.. ..+.+...++
T Consensus         6 ~~v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~~v-~~~~d~~kr~   84 (122)
T 1dro_A            6 AGEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAI-EIASDYTKKK   84 (122)
T ss_dssp             SSSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCC-EECCSSSSST
T ss_pred             CceEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECCCCEE-EeCCCCCCCC
Confidence            45679999988742        4579999999999999999999861100    001236788888533 3344435788


Q ss_pred             ceEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           93 FAFEHSR-GGYTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        93 ~~f~I~~-~~~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      |+|.|.+ +.+.|+|+|+|.+++++||.+|+.++..
T Consensus        85 ~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i~~  120 (122)
T 1dro_A           85 HVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSDS  120 (122)
T ss_dssp             TEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHHTC
T ss_pred             eEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence            9999996 5689999999999999999999999854

>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}

Probab=99.80  E-value=1.2e-18  Score=115.42  Aligned_cols=102  Identities=22%  Similarity=0.289  Sum_probs=77.1

Q ss_pred             cCCceEEEEEee-----CC--CCCCceeEEEEEeCCeEEEEecCCCCCCC--------CCcceEEeCCceEEEeeccccC
Q 035610           25 SQPGAIGPANKQ-----GD--YIKTWLRRWFILKQGEHFWFKDSHNITRG--------STPRGFIPVGTCLTVKCAEDVL   89 (144)
Q Consensus        25 ~~~~~~G~L~k~-----~~--~~~~w~~R~fvL~~~~l~y~k~~~~~~~~--------~~~~~~i~L~~~~~v~~~~~~~   89 (144)
                      .+..++|||.++     |.  ..+.|++|||||+++.|+||+++.+....        ..+.+.|+|.+|.......+..
T Consensus         6 ~~v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~~a~v~~~~~d~~   85 (124)
T 3pp2_A            6 KTLDKAGVLHRTKTADKGKRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAPKDKS   85 (124)
T ss_dssp             ---CEEEEEEEEEEEETTEECSSCCCEEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEECTTCEEEECCGGGC
T ss_pred             CcEEEEEEEEEEEeccCCccCCCCCceEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEcCCCEEEecccccC
Confidence            356799999887     22  33599999999999999999987521110        1467999999965433222435


Q ss_pred             CCCceEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610           90 NKPFAFEHSRG-GYTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus        90 ~~~~~f~I~~~-~~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      .++|+|.|.++ ++.|+|+|++.+++++||.+|+.||.
T Consensus        86 krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI~  123 (124)
T 3pp2_A           86 SRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGIQ  123 (124)
T ss_dssp             SSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred             CCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence            78899999975 46999999999999999999999984

>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}

Probab=99.80  E-value=3.3e-18  Score=113.35  Aligned_cols=102  Identities=15%  Similarity=0.228  Sum_probs=78.8

Q ss_pred             ceEEEEEe-----eCCC--CCCceeEEEEEeCCeEEEEecCCCCC-----CCCCcceEEeCCceEEEeeccccCCCCceE
Q 035610           28 GAIGPANK-----QGDY--IKTWLRRWFILKQGEHFWFKDSHNIT-----RGSTPRGFIPVGTCLTVKCAEDVLNKPFAF   95 (144)
Q Consensus        28 ~~~G~L~k-----~~~~--~~~w~~R~fvL~~~~l~y~k~~~~~~-----~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f   95 (144)
                      .++|+|.+     .|+.  .++|++|||+|.++.|+||+......     -+..|.+.|+|.++... ..++ ..++|+|
T Consensus         2 ~~~G~L~rk~llK~G~k~~~ksWkr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g~~V~-~~e~-~~~~~~F   79 (126)
T 2dtc_A            2 TMEGPLRRKTLLKEGRKPALSSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWMVQ-LPDD-PEHPDIF   79 (126)
T ss_dssp             CEEEEEEEEEEEBTTBCCSSCCCEEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTCEEE-CCCC-TTSTTEE
T ss_pred             ceeeeeeeeehhhcCCcccccCcccEEEEEeCCEEEEEcccccccccccccccCCCceEEeCCCEEE-ecCC-CCCCCEE
Confidence            46777764     3653  58999999999999999999762000     02478999999996554 4443 4689999


Q ss_pred             EEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhcCCC
Q 035610           96 EHSRG--GYTMYSVADTEKEKGERINSIGRAIVQHSRS  131 (144)
Q Consensus        96 ~I~~~--~~~~~l~a~s~~e~~~Wi~al~~ai~~~~~~  131 (144)
                      +|.++  +..|.|+|+|+.++++|+.+|..|+......
T Consensus        80 ~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~~~~~~  117 (126)
T 2dtc_A           80 QLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSSRPQ  117 (126)
T ss_dssp             EEECTTSCSEEEEECSSHHHHHHHHHHHHHHHTSCCC-
T ss_pred             EEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHhcCCCC
Confidence            99965  6789999999999999999999999755433

>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A

Probab=99.78  E-value=1.3e-18  Score=134.97  Aligned_cols=97  Identities=14%  Similarity=0.228  Sum_probs=78.9

Q ss_pred             cCCceEEEEEeeCCC--C-CCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC
Q 035610           25 SQPGAIGPANKQGDY--I-KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG  101 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~--~-~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~  101 (144)
                      ..+.++|||.|+++.  . +.|++|||+|+++.|+||++.     +..+.+.|+|.+|... ..++ ..+++||.|.+++
T Consensus       276 ~~~~k~G~L~K~~~~~~~~~~WkkRwfvL~~~~L~y~k~~-----~~~~~~~i~l~~~~v~-~~~~-~~r~~~F~i~t~~  348 (385)
T 2q13_A          276 NLTRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQARG-----DVAGGLAMDIDNCSVM-AVDC-EDRRYCFQITSFD  348 (385)
T ss_dssp             CCSCCEEEEEEC--------CCEEEEEEEETTEEEEECSS-----CSSCEEEEECTTCEEE-EECC-TTCSSEEEEECTT
T ss_pred             CCccEEEEEEEecCCCCCcCCceeEEEEEECCEEEEecCC-----CcCCCceEEccceEEE-eccc-cCCCceEEEEeCC
Confidence            366899999999754  3 379999999999999999984     3567899999997654 3333 3788999999998


Q ss_pred             --eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          102 --YTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       102 --~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                        ++|+|+|+|.+++++||.+|+.++...
T Consensus       349 ~~~~~~l~A~s~~e~~~Wi~ai~~~~~~~  377 (385)
T 2q13_A          349 GKKSSILQAESKKDHEEWICTINNISKQI  377 (385)
T ss_dssp             SCBCCCEECSSHHHHHHHHHHHHHHHTTC
T ss_pred             CCeEEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence              899999999999999999999988544

>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*

Probab=99.78  E-value=1e-18  Score=135.71  Aligned_cols=96  Identities=16%  Similarity=0.233  Sum_probs=79.4

Q ss_pred             CCceEEEEEeeCCCCCCceeEEEEE--eCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEE----e
Q 035610           26 QPGAIGPANKQGDYIKTWLRRWFIL--KQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHS----R   99 (144)
Q Consensus        26 ~~~~~G~L~k~~~~~~~w~~R~fvL--~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~----~   99 (144)
                      ...++|||.|+|+..+.|++|||||  .++.|.||+++.    +..|.|.|.|..+..+.. .+..+++++|.|.    +
T Consensus       145 ~~~keG~L~KrG~~~k~WkrRwFVL~~~~~~L~Yy~~~~----~~~p~g~I~L~~~~~~~~-~~~~~~~~~f~I~~~~~~  219 (386)
T 3lju_X          145 AGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRND----AKEPKAVMKIEHLNATFQ-PAKIGHPHGLQVTYLKDN  219 (386)
T ss_dssp             SSEEEEEEEEECSSSCCEEEEEEEEETTTTEEEEEC---------CCSEEEEGGGEEEEEC-HHHHTSTTCEEEEEEETT
T ss_pred             ccccccceeeeccccCCceEEEEEEEcCCCEEEEECCCC----ccCcccEEEeeccEEEEc-ccccCCCceEEEEEecCC
Confidence            4678999999999999999999999  899999999987    789999999999766543 2234688999998    5


Q ss_pred             CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610          100 GGYTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus       100 ~~~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      +.+.|+++|+|.+++.+|+++|+.+..
T Consensus       220 ~~R~y~l~A~s~~e~~~Wi~aIr~a~~  246 (386)
T 3lju_X          220 STRNIFIYHEDGKEIVDWFNALRAARF  246 (386)
T ss_dssp             EEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEEcCCHHHHHHHHHhhhhccc
Confidence            678999999999999999999998743

>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}

Probab=99.76  E-value=4.5e-18  Score=111.71  Aligned_cols=97  Identities=12%  Similarity=0.256  Sum_probs=77.2

Q ss_pred             eEEEEEe--eCCCCC-CceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-------cCCCCceEEEE
Q 035610           29 AIGPANK--QGDYIK-TWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-------VLNKPFAFEHS   98 (144)
Q Consensus        29 ~~G~L~k--~~~~~~-~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-------~~~~~~~f~I~   98 (144)
                      .+|||.+  +++..+ .|++|||||.++.|+||+.+. ......+.+.|+|+.+..|+.+..       ....++.|+|.
T Consensus         3 ~eGwl~~pk~~~~~k~~Wkkr~~vL~~~kL~~y~~~~-~~~~~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~   81 (117)
T 2rov_A            3 LEGWLSLPVRNNTKKFGWVKKYVIVSSKKILFYDSEQ-DKEQSNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQIL   81 (117)
T ss_dssp             SEEEEECCCCSSSSCCCCCEEEEEEETTEEEEESCHH-HHHTTCCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEEE
T ss_pred             eEEEEEeecCCCccCCCcEEEEEEEECCEEEEEECCC-CcccCCceEEEECcccEEEEEcccccccccccccCCcEEEEE
Confidence            6899996  666677 899999999999999999864 100236789999998877655432       12346899998


Q ss_pred             eC------CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610           99 RG------GYTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus        99 ~~------~~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      +.      .++++|.|+|.+|+++||.+|+++|.
T Consensus        82 ~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~  115 (117)
T 2rov_A           82 YANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP  115 (117)
T ss_dssp             ECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred             eCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence            63      58999999999999999999999774

>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}

Probab=99.76  E-value=3.6e-18  Score=127.36  Aligned_cols=98  Identities=17%  Similarity=0.210  Sum_probs=77.0

Q ss_pred             cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCC---ceEEEeeccc----cCCCCceEEE
Q 035610           25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVG---TCLTVKCAED----VLNKPFAFEH   97 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~---~~~~v~~~~~----~~~~~~~f~I   97 (144)
                      ..|.++|||+|+++..+.|++|||||+++.|+||+++.    +..+++.|.|.   .+........    ...++++|.|
T Consensus       166 ~~p~~~G~L~k~~~~~k~WkkR~fvL~~~~L~yyk~~~----~~~~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i  241 (291)
T 3tca_A          166 IVPELEGALYLKEDGKKSWKRRYFLLRASGIYYVPKGK----TKTSRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFVL  241 (291)
T ss_dssp             CCCCCEEEEEEECTTSSCEEEEEEEECSSEEEECCTTC----CSSTTTCEEEEEGGGCEEEEECSHHHHHCCSSSCEEEE
T ss_pred             CCCceEEEEEEeCCCCCCceEEEEEEeCCEEEEEecCc----cccccCceeeccceeEEEEecCccccccCCCCCeEEEE
Confidence            36789999999999899999999999999999999887    56666666554   4323222211    2356799999


Q ss_pred             EeCC------eEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610           98 SRGG------YTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus        98 ~~~~------~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      .+++      +.|+|+|+|.+++..||.||+.|..
T Consensus       242 ~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak~  276 (291)
T 3tca_A          242 KHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAKY  276 (291)
T ss_dssp             ECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             EcCCCCCCCceEEEEECCCHHHHHHHHHHHHHHhc
Confidence            9754      4699999999999999999998753

>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}

Probab=99.75  E-value=4.9e-18  Score=132.58  Aligned_cols=97  Identities=18%  Similarity=0.211  Sum_probs=79.6

Q ss_pred             cCCceEEEEEee---CCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC
Q 035610           25 SQPGAIGPANKQ---GDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG  101 (144)
Q Consensus        25 ~~~~~~G~L~k~---~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~  101 (144)
                      ....++|||.|+   |+..+.|++|||||+++.|+||+...     ..+.+.++|..|.. ...+. .++++||.|.+++
T Consensus       299 ~~~~k~G~L~k~~~~g~~~~~W~rrwfvl~~~~l~y~~~~~-----~~~~~~~~l~~~~v-~~~~~-~~r~~cF~i~~~~  371 (407)
T 4h8s_A          299 NLIQKAGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGA-----VAGGLIQDLDNCSV-MAVDC-EDRRYCFQITTPN  371 (407)
T ss_dssp             SCSCCEEEEEEEEECSSSCEEEEEEEEEECSSCEECCCTTC-----SSCCCCBCSSCCEE-EEECC-TTCSSEEEEECTT
T ss_pred             CcceeeceeeeeccCCCCCCCceEEEEEEECCEEEEEeCCC-----CCCCeEEECCceEE-EECCC-CCCCceEEEEecC
Confidence            356799999998   44567899999999999999998764     55778889999654 44443 3688999999875


Q ss_pred             --eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          102 --YTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       102 --~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                        ++|+|+|+|.+|+.+||.+|+.++.+.
T Consensus       372 ~~~~~~l~A~s~~e~~~Wi~ai~~a~~~~  400 (407)
T 4h8s_A          372 GKSGIILQAESRKENEEWICAINNISRQI  400 (407)
T ss_dssp             SSCCEEEECSSSHHHHHHHHHHHHHHSCC
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHHHHHHh
Confidence              689999999999999999999988543

>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1

Probab=99.74  E-value=5.2e-17  Score=109.85  Aligned_cols=99  Identities=17%  Similarity=0.265  Sum_probs=79.6

Q ss_pred             ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCC---------CCC----C-----------------CC---------
Q 035610           28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSH---------NIT----R-----------------GS---------   68 (144)
Q Consensus        28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~---------~~~----~-----------------~~---------   68 (144)
                      .|+|||.+++...+.|.+|||||.++.|+|++...         +..    +                 ..         
T Consensus         2 ~k~G~L~~~~~~~~~w~~~~fvL~~~~L~y~~e~s~~~~~~~~e~~~~~~~~~~~~~~~n~~fh~~~~~~~e~~~~~l~E   81 (150)
T 2fjl_A            2 IKNGILYLEDPVNHEWYPHYFVLTSSKIYYSEETSSDQGNEDEEEPKEASGSTELHSSLEVLFQGPNPAILEPEREHLDE   81 (150)
T ss_dssp             CEEEEEEEEETTTTEEEEEEEEEETTEEEECCCCSCSSCCSCCCCSCCCCCSCCCCCCSSSGGGSSCSTTSCTTCSSSCT
T ss_pred             CcceEEEeecCCCCCceEeEEEEECCEEEEEeeccccccccCcccccccCCchhhcccchhccccCCccccchhHhcccc
Confidence            58999999999999999999999999999988111         000    0                 00         


Q ss_pred             ------CcceEEeCCceEEEeeccccCCCCceEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610           69 ------TPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG---GYTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus        69 ------~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~---~~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                            -.+|+|+|.+|..........+++++|.|.++   .+.|.++|+|.+++.+||.+|++|+-
T Consensus        82 ~~~lG~l~kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~  148 (150)
T 2fjl_A           82 NSPLGDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQ  148 (150)
T ss_dssp             TTTTTTCCCEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred             cccccccccceEecCccEEEeccCCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence                  11799999998887655544578899999976   45899999999999999999999873

>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.73  E-value=1.5e-16  Score=103.98  Aligned_cols=104  Identities=18%  Similarity=0.099  Sum_probs=84.5

Q ss_pred             ecCCceEEEEEeeC--CCCCCceeEEEEEeC------CeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc---CCCC
Q 035610           24 WSQPGAIGPANKQG--DYIKTWLRRWFILKQ------GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV---LNKP   92 (144)
Q Consensus        24 ~~~~~~~G~L~k~~--~~~~~w~~R~fvL~~------~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~---~~~~   92 (144)
                      ..++++.|||.++.  .+.+.|++|||+|..      ..|-||..+....+...++.+|.|+.|..|.++...   ....
T Consensus         9 ~e~~vk~G~L~~q~q~~fgkKWrk~w~vLy~~S~~GvaRLE~yd~~ek~~r~~~~rrVIrLsdCisV~~~~~e~~~pk~~   88 (127)
T 2d9w_A            9 GDGAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVIRLSDCLRVAEAGGEASSPRDT   88 (127)
T ss_dssp             CCCSSEEEEEEECBCSSSSCBCCEEEEEEECCSSSSCCEEEEECCCSCSSSCSCCEEEECGGGEEEEEECCSCSSSCSSC
T ss_pred             cCccccceEEEecccchhhhhhheeEEEEecCCCCCceeeeeeeccCccccCCCCceEEEhhhCCeEecccCccCCCCcc
Confidence            34688999999985  567789999999985      348899987633334578999999999999877543   2455


Q ss_pred             ceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           93 FAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        93 ~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      +.|.|.|+++.|+|+|++. ++.+||.+|.+.....
T Consensus        89 ~aF~l~T~er~~~laAe~~-E~~~Wi~~ic~~aF~~  123 (127)
T 2d9w_A           89 SAFFLETKERLYLLAAPAA-ERGDWVQAICLLAFSG  123 (127)
T ss_dssp             EEEEEEESSCEEEEEECHH-HHHHHHHHHHHHHTSS
T ss_pred             eEEEEEeCCcEEEEEeCcH-HHHHHHHHHHHHhcCC
Confidence            8999999999999999965 8999999999977544

>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.72  E-value=5.2e-17  Score=108.04  Aligned_cols=97  Identities=13%  Similarity=0.186  Sum_probs=78.4

Q ss_pred             cCCceEEEEEeeC---CCCCCceeEEEEEeCCeEEEEecCCCCCCCC--CcceEEeCCceEEEeeccccCCCCceEEEEe
Q 035610           25 SQPGAIGPANKQG---DYIKTWLRRWFILKQGEHFWFKDSHNITRGS--TPRGFIPVGTCLTVKCAEDVLNKPFAFEHSR   99 (144)
Q Consensus        25 ~~~~~~G~L~k~~---~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~--~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~   99 (144)
                      .-|...+||...+   ...+.|++|||+|+++.|+||+++.    +.  .|.+.|+|.+|... +.......+++|.+..
T Consensus         7 ~~pel~~~l~~~~pkk~tlK~~KrrWFvlk~~~L~YyK~ke----e~~~ePig~I~L~gceV~-pd~~~~~~kf~ikl~i   81 (137)
T 2ys3_A            7 GIPELKDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKSQD----EAPGDPIQQLNLKGCEVV-PDVNVSGQKFCIKLLV   81 (137)
T ss_dssp             SCCCEECCCEECCTTSCCSSSSCCCEEEECSSCEEEESSTT----TTTSCCSCCBCTTTCEEE-ECCBGGGTBEEEEEEE
T ss_pred             CCcchhHHHHhhCccccccccceeEEEEEeCCEEEEECCch----hccCCCceEEECCCCEEe-ccccccCCceEEEEEc
Confidence            3577889998875   3567899999999999999999886    43  89999999998744 3332235668877775


Q ss_pred             CC----eEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610          100 GG----YTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus       100 ~~----~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      +.    ++|+|.|+|++++.+||+|++.|-.
T Consensus        82 Ps~~g~r~y~l~cdsEeqy~~WMaA~rlAsk  112 (137)
T 2ys3_A           82 PSPEGMSEIYLRCQDEQQYARWMAGCRLASK  112 (137)
T ss_dssp             ECSSSEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred             cCCCCceEEEEECCCHHHHHHHHHHHHHhcc
Confidence            43    8999999999999999999998763

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.57  E-value=3.4e-15  Score=117.08  Aligned_cols=97  Identities=23%  Similarity=0.289  Sum_probs=71.3

Q ss_pred             CCceEEEEEeeCCCCCCceeEEEEEe-CCeEEEEecCCCCCCCCCcceEEeCCceEEEe--eccccCCCCceEEEEeCC-
Q 035610           26 QPGAIGPANKQGDYIKTWLRRWFILK-QGEHFWFKDSHNITRGSTPRGFIPVGTCLTVK--CAEDVLNKPFAFEHSRGG-  101 (144)
Q Consensus        26 ~~~~~G~L~k~~~~~~~w~~R~fvL~-~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~--~~~~~~~~~~~f~I~~~~-  101 (144)
                      ..+++|||.|+|+..+.|++|||+|+ ++.|.||+++.    ...+.+.|+|..+..+.  .......++++|.|...+ 
T Consensus         5 ~v~keG~L~K~g~~~k~Wk~r~fvL~~~~~l~yyk~~~----~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~I~~~~~   80 (446)
T 4ejn_A            5 AIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERP----QDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQW   80 (446)
T ss_dssp             CEEEEEEEEEEETTTTEEEEEEEEEETTSBEEEESSCC-----------CCCGGGBCTTCEEEEECSSSTTEEEEEEEET
T ss_pred             eEEEEeeEEeeccccccccceEEEEeeCCEEEEEecCC----CCCccCcccccCccccceeecCCCCCCCceeEEEcCCC
Confidence            46799999999999999999999997 89999999987    67778888888843321  111123567999998543 


Q ss_pred             eEE---EEEcCCHHHHHHHHHHHHHHHH
Q 035610          102 YTM---YSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus       102 ~~~---~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      ..+   .+.+++.+++++|+.+|+.++.
T Consensus        81 ~~~~~r~~~~~~~ee~e~W~~ai~~~i~  108 (446)
T 4ejn_A           81 TTVIERTFHVETPEEREEWTTAIQTVAD  108 (446)
T ss_dssp             TEEEEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred             ceeeeeEEecCCHHHHHHHHHHHHhhhh
Confidence            222   6889999999999999999864

>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}

Probab=99.57  E-value=5.9e-14  Score=103.19  Aligned_cols=99  Identities=10%  Similarity=0.093  Sum_probs=77.0

Q ss_pred             cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceE---EeCCceEEEeeccc----cCCCCceEEE
Q 035610           25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGF---IPVGTCLTVKCAED----VLNKPFAFEH   97 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~---i~L~~~~~v~~~~~----~~~~~~~f~I   97 (144)
                      .-|..+|||++++...++|++|||+|+++.|+|++...    ...++..   +.|++.........    ....++||.|
T Consensus       130 ~~P~~~G~L~~ke~~~K~WkkRyfvLr~sgLy~~~k~~----sk~~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~i  205 (256)
T 3hk0_A          130 SSPEIQGFLHVKELGKKSWKKLYVCLRRSGLYCSTKGT----SAAPRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCI  205 (256)
T ss_dssp             SCEEEEEEEEEECTTSSCEEEEEEEEETTEEEEESSTT----CCCGGGEEEEECCTTEEEEEESSTHHHHCCSSSEEEEE
T ss_pred             CCCcceeEEEEecCCCCcceEEEEEEeCCEEEEEecCC----CCccccceEEEEcCCCEEEEecccccccCCCCCCEEEE
Confidence            45678999999988889999999999999999888664    4445544   68998555443321    1244699999


Q ss_pred             EeCCe------EEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           98 SRGGY------TMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        98 ~~~~~------~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      .....      .++|+|++++++..|+.+|+.|...
T Consensus       206 k~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak~g  241 (256)
T 3hk0_A          206 KPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLKYG  241 (256)
T ss_dssp             EETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHHHT
T ss_pred             EcccccCCCceEEEEEeCCHHHHHHHHHHHHHHHhh
Confidence            95532      5999999999999999999998643

>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}

Probab=99.54  E-value=1.9e-14  Score=106.92  Aligned_cols=102  Identities=18%  Similarity=0.259  Sum_probs=76.7

Q ss_pred             cCCceEEEEEee-----C-------CCCCCceeEEEEEeCCeEEEEecCCCCC--CCCCcceEEeCCceEEEeeccccCC
Q 035610           25 SQPGAIGPANKQ-----G-------DYIKTWLRRWFILKQGEHFWFKDSHNIT--RGSTPRGFIPVGTCLTVKCAEDVLN   90 (144)
Q Consensus        25 ~~~~~~G~L~k~-----~-------~~~~~w~~R~fvL~~~~l~y~k~~~~~~--~~~~~~~~i~L~~~~~v~~~~~~~~   90 (144)
                      ..+.++|||.++     +       ...+.|+++||||+++.|+||+++....  ....+.+.|.|.++...... +...
T Consensus         9 ~~v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLkg~~L~fYKde~~~~~~~~~~p~~~I~L~ga~v~~a~-d~~k   87 (279)
T 3a8n_A            9 GTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQAVP-EHPK   87 (279)
T ss_dssp             -CCSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEETTEECCBCCC--------CCCSSCCBCCSCEECCCT-TSSS
T ss_pred             CceeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEeCCEEEEEecccccccccccCCCceEeccCcEEEecc-ccCC
Confidence            346699999753     1       1357999999999999999999875211  12356788999997665333 3346


Q ss_pred             CCceEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           91 KPFAFEHSRG-GYTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        91 ~~~~f~I~~~-~~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      ++|+|.|.++ ++.|+|+|++.+|+++||.+|+.++..
T Consensus        88 Kk~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~~~  125 (279)
T 3a8n_A           88 KDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACAA  125 (279)
T ss_dssp             SCSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence            7899999865 578999999999999999999998753

>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*

Probab=99.54  E-value=2.6e-13  Score=92.52  Aligned_cols=104  Identities=13%  Similarity=0.162  Sum_probs=79.1

Q ss_pred             CCceEEEEEeeC---CCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEe---
Q 035610           26 QPGAIGPANKQG---DYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSR---   99 (144)
Q Consensus        26 ~~~~~G~L~k~~---~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~---   99 (144)
                      -|...+||....   -..+.|++|||+++++.|+|||++.+.  ...|.+.|.|.||..+..+.- ...++++.+.-   
T Consensus        46 iPeL~dyLk~~~pk~~tLKgyKryWFv~kd~~LsyYKskEe~--~geP~~~I~LrGCEVtpDVnv-a~~Kf~IkL~vP~~  122 (173)
T 4f7h_A           46 IPELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSKEES--SGTPAHQMNLRGCEVTPDVNI-SGQKFNIKLLIPVA  122 (173)
T ss_dssp             TTCEEEEEEEECCBTTBCCCCEEEEEEEETTEEEEESCGGGC--SSCCSEEEECTTCEEEEEEET-TTTEEEEEEEEEET
T ss_pred             ChhhHhHHHhhcchhcccccceeEEEEEeCCEEEEEcCHhHh--cCCCceEEecCceEEeccccc-cccceeEEEeccCC
Confidence            567889997754   356899999999999999999998721  267999999999876533322 24556666553   


Q ss_pred             -CCeEEEEEcCCHHHHHHHHHHHHHHHHhcCCCCCc
Q 035610          100 -GGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTE  134 (144)
Q Consensus       100 -~~~~~~l~a~s~~e~~~Wi~al~~ai~~~~~~~~~  134 (144)
                       +...+++.|+++.++.+||.|++-|..  ++++.|
T Consensus       123 ~gm~e~~Lrcd~E~qya~WMAAcrLAsk--GktmAd  156 (173)
T 4f7h_A          123 EGMNEIWLRCDNEKQYAHWMAACRLASK--GKTMAD  156 (173)
T ss_dssp             TEEEEEEEEESSHHHHHHHHHHHHHHHT--TCCTTS
T ss_pred             CCcceeeeecCCHHHHHHHHHHhhhhcc--CCcccc
Confidence             346899999999999999999999774  445544

>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}

Probab=99.51  E-value=5.5e-13  Score=90.04  Aligned_cols=105  Identities=15%  Similarity=0.191  Sum_probs=76.8

Q ss_pred             cCCceEEEEEeeC---CCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEe--
Q 035610           25 SQPGAIGPANKQG---DYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSR--   99 (144)
Q Consensus        25 ~~~~~~G~L~k~~---~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~--   99 (144)
                      .-|...+||....   -..+.|++|||++++..|.|||++.+.  ...|.+.|+|.+|..+..+. ....+++|.+.-  
T Consensus        24 ~iPeL~dyLk~~~pkrltLKgfKryWfv~kDt~LsyYKSkEe~--~geP~~~inLrGCEVtPDVn-va~~Kf~ikL~ip~  100 (165)
T 4bbk_A           24 DIPKLADYLKLFRPKKLMLKACKQYWFVFKDTSIAYFKNKELE--QGEPIEKLNLRGCEIVPDVN-VSGRKFGIKLLIPV  100 (165)
T ss_dssp             --CCEEEEEEEEC-------CCEEEEEEEETTEEEEESSGGGT--TSCCSEEEECTTCEEEEEEE-TTTTEEEEEEEEEE
T ss_pred             cChhhHhHHHhhcccccccccceeEEEEEeCCEEEEEcCHHHh--cCCCceEEecCccEEecccc-cccceeeEEEecCC
Confidence            3567889997754   356899999999999999999998722  36899999999987653222 125567777753  


Q ss_pred             C--CeEEEEEcCCHHHHHHHHHHHHHHHHhcCCCCCc
Q 035610          100 G--GYTMYSVADTEKEKGERINSIGRAIVQHSRSVTE  134 (144)
Q Consensus       100 ~--~~~~~l~a~s~~e~~~Wi~al~~ai~~~~~~~~~  134 (144)
                      +  ...++|.|+++.+..+||.|++-|..  ++++.|
T Consensus       101 ~~gm~e~~LrcdsE~QYa~WMAAcrLAsk--GkTmAD  135 (165)
T 4bbk_A          101 ADGMNEVYLRCDHEDQYARWMAACILASK--GKTMAD  135 (165)
T ss_dssp             TTEEEEEEEEESSHHHHHHHHHHHHHHHT--TCCTTS
T ss_pred             CCcceeeeeecCCHHHHHHHHHHhhhccc--ccchhh
Confidence            2  35889999999999999999999774  445554

>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A

Probab=99.50  E-value=1.9e-13  Score=101.61  Aligned_cols=98  Identities=15%  Similarity=0.246  Sum_probs=72.6

Q ss_pred             cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCc---ceEEeCCceEEEeeccc----cCCCCceEEE
Q 035610           25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTP---RGFIPVGTCLTVKCAED----VLNKPFAFEH   97 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~---~~~i~L~~~~~v~~~~~----~~~~~~~f~I   97 (144)
                      ..|..+|||++++...++|++|||+|+++.|+|+....    ...+   .+.+.|+++........    ....++||.|
T Consensus       156 ~~pe~~G~L~~k~~~~k~WkkRyfvLr~sgLyy~~K~~----sk~~r~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~i  231 (281)
T 4gmv_A          156 TVPEIEGVLWLKDDGKKSWKKRYFLLRASGIYYVPKGK----AKVSRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVL  231 (281)
T ss_dssp             CCCCCEEEEEEECTTSSCEEEEEEEECSSCEEEC-------------CCEEEECGGGCEEEEESSHHHHTCCSCSCEEEE
T ss_pred             CCCccEEEEEEECCCCCCCeEEEEEEeCCEEEEEeCCC----CCccccceEEEEcCCcEEEEecccccccCCCCCcEEEE
Confidence            46779999999988889999999999999999888654    2334   45668888655433211    1345799999


Q ss_pred             EeC------CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610           98 SRG------GYTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus        98 ~~~------~~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      ..+      ...++|+|++++++..|+.+|+.|..
T Consensus       232 k~~~~~~~~~~~~~~caede~~~~~Wv~Air~ak~  266 (281)
T 4gmv_A          232 KHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKY  266 (281)
T ss_dssp             ECTTCCSCCTTCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             ecCccCCCCCceEEEEeCCHHHHHHHHHHHHHHhh
Confidence            953      34799999999999999999999764

>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.49  E-value=6.4e-13  Score=86.73  Aligned_cols=100  Identities=18%  Similarity=0.123  Sum_probs=84.9

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc-----CCCCceEEEE
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV-----LNKPFAFEHS   98 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~-----~~~~~~f~I~   98 (144)
                      ...++++||+-+.+..-+.|+|+|++|...+|.+|+++.    .......|+|..+..|......     ...+|||+|.
T Consensus         5 ~s~vlkeGW~VH~t~~d~~rKRHYWrLD~K~Itlf~~e~----~~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~   80 (125)
T 2coa_A            5 SSGTLREGWVVHYSNKDTLRKRHYWRLDCKCITLFQNNT----TNRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIV   80 (125)
T ss_dssp             CCSCSEEEEEEECCSSSCCCEEEEEEECSSEEEEESSSS----CSSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEE
T ss_pred             CCceeecceEEEEccCCccccceeeEecCCeEEEEecCC----CCceeeeeehhHeecccccccccccCCCCCCceEEEE
Confidence            456789999999998888999999999999999999988    7889999999999888876432     2356999999


Q ss_pred             eCCeEEEEEcC---C--------HHHHHHHHHHHHHHHHh
Q 035610           99 RGGYTMYSVAD---T--------EKEKGERINSIGRAIVQ  127 (144)
Q Consensus        99 ~~~~~~~l~a~---s--------~~e~~~Wi~al~~ai~~  127 (144)
                      +.+..||+.++   .        .+.+..|..||++|+-.
T Consensus        81 T~~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqALmP  120 (125)
T 2coa_A           81 TANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQALMS  120 (125)
T ss_dssp             CSSCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHGGG
T ss_pred             eCCeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhccC
Confidence            99999998763   1        25699999999998843

>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A

Probab=99.47  E-value=4.7e-13  Score=90.44  Aligned_cols=91  Identities=20%  Similarity=0.240  Sum_probs=75.5

Q ss_pred             CCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEE
Q 035610           26 QPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMY  105 (144)
Q Consensus        26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~  105 (144)
                      ..++.|+|.|+.+..  |++|||+|+++...||-++.    ....+|.|+++.+..|....     ...|.|.+++++|+
T Consensus        51 ~Ilk~G~v~KrkGl~--~kkR~liLT~~PrL~Yvdp~----~~~~KGeIpls~~l~ve~k~-----~~~F~I~Tp~RtY~  119 (151)
T 1w1g_A           51 LILKMGPVDKRKGLF--ARRRQLLLTEGPHLYYVDPV----NKVLKGEIPWSQELRPEAKN-----FKTFFVHTPNRTYY  119 (151)
T ss_dssp             CEEEEEEEEEEETTE--EEEEEEEEETTTEEEEEETT----TTEEEEEECCCTTCEEEESS-----SSEEEEEETTEEEE
T ss_pred             cEEEEEEEEecccCc--ceeEEEEEcCCceEEEEcCc----cccccceEecCCCeeEEEcC-----CCEEEEECCCceEE
Confidence            446899999965543  99999999998888888876    67889999999876664433     24799999999999


Q ss_pred             EEcCCHHHHHHHHHHHHHHHHhc
Q 035610          106 SVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       106 l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      |.+. ...+++|+++|+.++...
T Consensus       120 ~~d~-~~~AqeWv~aI~~~~~~~  141 (151)
T 1w1g_A          120 LMDP-SGNAHKWCRKIQEVWRQR  141 (151)
T ss_dssp             EECT-TSCHHHHHHHHHHHHHHH
T ss_pred             EEcC-ccCHHHHHHHHHHHHHHH
Confidence            9886 888999999999988653

>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=5.1e-12  Score=82.72  Aligned_cols=101  Identities=16%  Similarity=0.113  Sum_probs=85.2

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc-----CCCCceEEEE
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV-----LNKPFAFEHS   98 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~-----~~~~~~f~I~   98 (144)
                      ....+++||+-..+..-..|+|+|++|...+|.+|.++.    .......|+|..+..|......     ...+|||+|.
T Consensus         5 ~s~vlkeGWmVH~t~~d~~rKRHYWrLD~K~Itlf~~e~----~~k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~   80 (129)
T 2d9z_A            5 SSGMVKEGWMVHYTSRDNLRKRHYWRLDSKCLTLFQNES----GSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEII   80 (129)
T ss_dssp             CTTSEEEEEEEEEESSCCCCEEEEEEEESSCEEEESCSS----CCSCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEE
T ss_pred             CCceeecceEEEEccCCccccceeeEecCCeEEEEecCC----CCceeceeeHHHhcccccccCccccCCCCCCceEEEE
Confidence            346779999999987778999999999999999999987    7888899999999888776432     2345999999


Q ss_pred             eCCeEEEEEcCC---------------HHHHHHHHHHHHHHHHhc
Q 035610           99 RGGYTMYSVADT---------------EKEKGERINSIGRAIVQH  128 (144)
Q Consensus        99 ~~~~~~~l~a~s---------------~~e~~~Wi~al~~ai~~~  128 (144)
                      +.+..||+.++.               .+.+..|..||++|+-..
T Consensus        81 T~~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALmP~  125 (129)
T 2d9z_A           81 TDTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALMSG  125 (129)
T ss_dssp             CSSCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHHHS
T ss_pred             ECCEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhccCC
Confidence            999999987632               689999999999998544

>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=99.11  E-value=1.6e-09  Score=72.07  Aligned_cols=104  Identities=13%  Similarity=0.142  Sum_probs=79.4

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC-e
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG-Y  102 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~-~  102 (144)
                      ..+....|-+..+.+..+.-+.|||+|-++.|.|.+... .......+|.++|.+ ..|...++..+.+|+|.|..+. +
T Consensus        25 lG~ii~~s~v~~~~~~~~~~~eR~l~LF~~~Ll~~s~~~-~~~~f~~kgklPL~g-~~V~~~ed~~~~~~aFeI~g~~~~  102 (132)
T 1v61_A           25 LGNVIFMSQVVMQHGACEEKEERYFLLFSSVLIMLSASP-RMSGFMYQGKIPIAG-MVVNRLDEIEGSDCMFEITGSTVE  102 (132)
T ss_dssp             TCCCSCEEEEEBCCSSSSCCCEEEEEECSSCEEEEECSS-SSSCCEEEEEECTTT-CBCSTTCSSSSSCCCEEEECSSSC
T ss_pred             cCCeEEEeeEEEEEcccCcceEEEEEEcCCeEEEEEecC-CCceEEEEEEEecce-eEEEeccccccCccEEEEecCCCc
Confidence            335556666666654445568899999999999988654 112445679999999 4555555545788999999775 8


Q ss_pred             EEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610          103 TMYSVADTEKEKGERINSIGRAIVQHS  129 (144)
Q Consensus       103 ~~~l~a~s~~e~~~Wi~al~~ai~~~~  129 (144)
                      .+.++|.|.+|+++|+.+|+.++..+.
T Consensus       103 ~i~v~~~s~eE~~~Wl~~L~~~i~~~~  129 (132)
T 1v61_A          103 RIVVHCNNNQDFQEWMEQLNRLTKSGP  129 (132)
T ss_dssp             EEEECCCCSHHHHHHHHHHHHHHTTSC
T ss_pred             eEEEEeCCHHHHHHHHHHHHHHHhhcc
Confidence            899999999999999999999986554

>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*

Probab=98.91  E-value=7.5e-08  Score=62.35  Aligned_cols=100  Identities=11%  Similarity=-0.133  Sum_probs=72.1

Q ss_pred             CceEEEEEeeCCCC-CCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEE
Q 035610           27 PGAIGPANKQGDYI-KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMY  105 (144)
Q Consensus        27 ~~~~G~L~k~~~~~-~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~  105 (144)
                      .+++|-|.+..... +.=++++|+|-++.|.|-+..............++|.+...+ ...+....+|+|.|.+..+++.
T Consensus         8 lv~eG~l~el~~~~~k~~~~v~~FLfND~Ll~a~~~~~~~~~~~~~~~~~L~~~~v~-d~~d~~~~~n~f~i~~~~~s~~   86 (113)
T 1zc3_B            8 LVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRRGMYRYNALYPLDRLAVV-NVKDNPPMKDMFKLLMFPESRI   86 (113)
T ss_dssp             EEEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTTSCEEEEEEEETTTCEEE-EECCBTTBSSEEEEEETTEEEE
T ss_pred             EEEeCcEEEEccccCCCCccEEEEecCCEEEEEEEeccCcccEEEEEEEEcccCEEE-ECCCCcccceEEEEEeCCceEE
Confidence            34789888765322 233567999999999987764300001234456788884443 3444346789999999999999


Q ss_pred             EEcCCHHHHHHHHHHHHHHHHh
Q 035610          106 SVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       106 l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      ++|+|..++.+|+.+|++|+..
T Consensus        87 ~~aes~~eK~~Wl~~~~~a~~~  108 (113)
T 1zc3_B           87 FQAENAKIKREWLEVLEETKRA  108 (113)
T ss_dssp             EECSSHHHHHHHHHHHHHHHHH
T ss_pred             EEcCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999854

>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=98.88  E-value=8.1e-08  Score=63.06  Aligned_cols=100  Identities=13%  Similarity=0.102  Sum_probs=78.6

Q ss_pred             cCCceEEEEEeeC--------CCCCCceeEEEEEeC----C-e-EEEEecCCCCCCCCCcceEEeCCceEEEeeccc--c
Q 035610           25 SQPGAIGPANKQG--------DYIKTWLRRWFILKQ----G-E-HFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED--V   88 (144)
Q Consensus        25 ~~~~~~G~L~k~~--------~~~~~w~~R~fvL~~----~-~-l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~--~   88 (144)
                      .+..+||.|.-..        +....|++++++|..    + . |-||.++.    ..+|+..|++..|..|+....  .
T Consensus        16 ~e~~kEG~l~~~~~~~~~~~~~~~~~W~k~RLvL~k~g~G~~y~LEfy~PPk----ssKpK~~i~cs~I~EVR~tt~LEm   91 (136)
T 1v5m_A           16 VDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPK----ASRPKVSIPLSAIIEVRTTMPLEM   91 (136)
T ss_dssp             CSCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESSTT----SSSCSSCEETTTCCBCCCCCCSSS
T ss_pred             ceeeeeeeeeeecccccccccCcccchhheeeEEEEccCCCceEEEEecCCc----ccCCccccchhhhhhhhhcccccc
Confidence            3667899986642        244689999999873    2 3 55888877    788999999999877765533  2


Q ss_pred             CCCCceEEEEeCCe-EEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           89 LNKPFAFEHSRGGY-TMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        89 ~~~~~~f~I~~~~~-~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      .++.|.|.|...++ .|+|.|.+..++++|+..|+.++...
T Consensus        92 PD~~nTFVlK~~n~~eyi~ea~d~~q~~sWla~Ir~C~~~g  132 (136)
T 1v5m_A           92 PEKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCVDSG  132 (136)
T ss_dssp             CCCTTEECCBCTTSCBEEEECSSHHHHHHHHHHHHHHHHHS
T ss_pred             CCccceEEEEecCCcEEEEEcCCHHHHHHHHHHHHhhcCCC
Confidence            46779999998766 89999999999999999999998653

>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}

Probab=98.74  E-value=9.1e-08  Score=68.19  Aligned_cols=99  Identities=14%  Similarity=0.163  Sum_probs=77.7

Q ss_pred             cCCceEEEEEeeCCCCCCceeEEEEEeC-----C--eEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEE
Q 035610           25 SQPGAIGPANKQGDYIKTWLRRWFILKQ-----G--EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEH   97 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~-----~--~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I   97 (144)
                      .....||++..+.+  ++|+.||+||+.     +  .|..|+++.+..+...++.++.|..+..++..-.-.++.|++.|
T Consensus         7 ~~~v~eg~vk~r~~--KkWk~rw~vlrk~s~~adcl~L~vYkd~~dr~k~~~~KaslsL~~~~GlE~g~~ldk~s~TlAI   84 (224)
T 3ml4_A            7 EAALVEGQVKLRDG--KKWKSRWLVLRKPSPVADCLLMLVYKDKCERSKGLRERSSLTLEDICGLEPALPYEGLAHTLAI   84 (224)
T ss_dssp             CCCSEEEEEEEC-----CCEEEEEEEECSSTTSSCEEEEEESSSHHHHSCCCCSEEEEECCEEEEEEEEEETTEEEEEEE
T ss_pred             cceeEEEeeeeecC--CceeeEEEEEEcCCCchheEEEEEEcChhhhhcCCcccceeehHHhcCccccccccCcccEEEE
Confidence            35678999988763  599999999984     3  36689876522234677899999998888766553467799999


Q ss_pred             EeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 035610           98 SRGGYTMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus        98 ~~~~~~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      +..+....|++++.+.+..|-..|+..+
T Consensus        85 Ic~d~~~vLAFds~e~l~~W~~~l~~sl  112 (224)
T 3ml4_A           85 ICLSQAVMLGFDSHEAMCAWDTRIRYAL  112 (224)
T ss_dssp             EESSCEEEEECSSHHHHHHHHHHHHHHT
T ss_pred             EecCcEEEEEeCCHHHHHHHHHHHhhcc
Confidence            9999999999999999999999998744

>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}

Probab=98.64  E-value=1.1e-06  Score=58.66  Aligned_cols=84  Identities=11%  Similarity=-0.014  Sum_probs=64.7

Q ss_pred             CceeEEEEEeCCeEEEEecCCC--CCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC------eEEEEEcCCHHH
Q 035610           42 TWLRRWFILKQGEHFWFKDSHN--ITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG------YTMYSVADTEKE  113 (144)
Q Consensus        42 ~w~~R~fvL~~~~l~y~k~~~~--~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~------~~~~l~a~s~~e  113 (144)
                      .-+.|+|.|-++.|.|-+.-..  .......+..++|.+ ..|...++. ..+|+|.|....      ..+.|.|.|..|
T Consensus        32 g~qqR~~FLFND~LL~TK~~~kkk~~~~Y~vr~~~~L~g-m~V~~~e~e-~~p~~~~l~s~~~G~~~k~~i~~~A~s~~E  109 (140)
T 3qwm_A           32 GLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYG-MQVLLFENQ-YYPNGIRLTSSVPGADIKVLINFNAPNPQD  109 (140)
T ss_dssp             TTTEEEEEEESSCEEEEECCC---CCCCCCCEEEECCTT-EEEEEECCS-SCTTEEEEEECCTTSCCEEEEEEECSSHHH
T ss_pred             cccceEEEEecchhhheeecccCCCCCceEEEEEeeecc-eEEEcccCC-CCceEEEEEecCCCCcceEEEEEECCCHHH
Confidence            4689999999999999862210  122456788999999 555444443 589999999653      568899999999


Q ss_pred             HHHHHHHHHHHHHh
Q 035610          114 KGERINSIGRAIVQ  127 (144)
Q Consensus       114 ~~~Wi~al~~ai~~  127 (144)
                      +.+|+++|+.+|..
T Consensus       110 R~rwi~dL~esI~e  123 (140)
T 3qwm_A          110 RKKFTDDLRESIAE  123 (140)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999999864

>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}

Probab=98.54  E-value=2.2e-07  Score=67.02  Aligned_cols=39  Identities=26%  Similarity=0.618  Sum_probs=34.3

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCC
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSH   62 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~   62 (144)
                      ...|-.+|||.|+|+..+.|++|||||+++.+.||+...
T Consensus        18 ~~~~~~~g~l~~~~~~~~~w~~rw~vl~~~~~~~~~~~~   56 (228)
T 3tfm_A           18 PGSPYFHSFLYMNGGLMNSWKRRWCVLKDETFLWFRSKQ   56 (228)
T ss_dssp             ---CCEEEEEEECCTTTCCCEEEEEEEETTEEEEESSCC
T ss_pred             CCCCceEEEEeecCcccccceEEEEEEeCCEEEEeccCC
Confidence            447789999999999999999999999999999999876

>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}

Probab=98.33  E-value=3e-06  Score=66.18  Aligned_cols=95  Identities=15%  Similarity=0.119  Sum_probs=67.8

Q ss_pred             ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEE
Q 035610           28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSV  107 (144)
Q Consensus        28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~  107 (144)
                      +++|.|.+..+  +..+.||++|-++.|.+.+...  ......+..|+|.++ .+....+ ...+++|.|.++.+.|.|.
T Consensus       245 i~~g~l~~~~~--~~~~~r~~fLF~d~Ll~~k~~~--~~~y~~k~~i~L~~l-~v~~~~~-~~~~~~f~i~~~~~~~~l~  318 (434)
T 3mpx_A          245 LKEGTLMKVTG--KNRRPRHLFLMNDVLLYTYPQK--DGKYRLKNTLAVANM-KVSRPVM-EKVPYALKIETSESCLMLS  318 (434)
T ss_dssp             EECCEEEEEET--TEEEEEEEEEESSEEEEEEECT--TSCEEEEEEEEC------CCCCC-TTSCSEEEEECSSCEEEEE
T ss_pred             EecceEEEEeC--CCceEEEEEEECCEEEEEEecC--CCeEEEEEEEEcCCc-EEEecCC-CCCCeeEEEecCCeEEEEe
Confidence            47888877653  3578899999999999988653  112345678888884 3333322 2568999999999999999


Q ss_pred             cCCHHHHHHHHHHHHHHHHhc
Q 035610          108 ADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       108 a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      |.|.++++.|+++|++++...
T Consensus       319 a~s~~ek~~W~~~i~~ai~e~  339 (434)
T 3mpx_A          319 ASSCAERDEWYGCLSRALPED  339 (434)
T ss_dssp             CSSHHHHHHHHHHHHHC----
T ss_pred             cCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998653

>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1

Probab=98.32  E-value=1.4e-05  Score=52.80  Aligned_cols=83  Identities=11%  Similarity=0.190  Sum_probs=59.9

Q ss_pred             eeEEEEEeCCe-EEEEecCCCCCCCCCcceEEeCCceEEEeeccc---------cCCCCceEEEEeCC--eEEEEEcCCH
Q 035610           44 LRRWFILKQGE-HFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED---------VLNKPFAFEHSRGG--YTMYSVADTE  111 (144)
Q Consensus        44 ~~R~fvL~~~~-l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~---------~~~~~~~f~I~~~~--~~~~l~a~s~  111 (144)
                      +.|||.|..+. +.|+.+..  .......+.|+|+.+..|.....         ......+|+|...+  +++.|.|+|.
T Consensus        29 k~r~f~l~~~~~~~w~~s~~--~~~~~~~~~i~i~~I~eIr~G~~s~~~~~~~~~~~~~~~FsIiy~~~~k~LdlvA~s~  106 (131)
T 1mai_A           29 RERFYKLQEDCKTIWQESRK--VMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSIVFKDQRNTLDLIAPSP  106 (131)
T ss_dssp             EEEEEEECTTSSEEEECCCC--TTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGGEEEEEESSSCCCEEEECSSH
T ss_pred             eeEEEEECCCCCEEEeCCcC--CCCCCcCcEEEHhhhHHHHCCCCCHHHHhhhhcCCccceEEEEECCCCceEEEEeCCH
Confidence            67899998754 44553221  11234678999999888877641         12345899999776  6899999999


Q ss_pred             HHHHHHHHHHHHHHHhc
Q 035610          112 KEKGERINSIGRAIVQH  128 (144)
Q Consensus       112 ~e~~~Wi~al~~ai~~~  128 (144)
                      ++++.|+.+|+..+...
T Consensus       107 ~e~~~Wv~gL~~L~~~~  123 (131)
T 1mai_A          107 ADAQHWVQGLRKIIHHS  123 (131)
T ss_dssp             HHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            99999999999876443

>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A

Probab=98.32  E-value=6.9e-06  Score=62.48  Aligned_cols=97  Identities=14%  Similarity=0.101  Sum_probs=71.6

Q ss_pred             CCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCC---C----CCCCCcceEEeCCceEEEeeccccCCCCceEEEE
Q 035610           26 QPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHN---I----TRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHS   98 (144)
Q Consensus        26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~---~----~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~   98 (144)
                      .-.++|.|.+.|    ..+.|+++|-++.|.+.+....   .    ......++.|+|..+. |....+....+++|.|.
T Consensus       246 ~li~eG~l~~~g----~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~-v~~~~d~~~~~~~F~i~  320 (354)
T 1dbh_A          246 EFIMEGTLTRVG----AKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQ-INDKDDTNEYKHAFEII  320 (354)
T ss_dssp             CEEEEEEEEETT----CSSCEEEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCE-EEECCCSSSCCSEEEEC
T ss_pred             eEEEEeeEEEEe----cCceEEEEEeCCEEEEEecCCCCCCCCCCCCcceeEEEEEeccceE-EEeCCcccccCccEEEe
Confidence            345788888874    5788999999999998887520   0    0012235788999854 44443323567999999


Q ss_pred             eCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           99 RGG-YTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        99 ~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      ..+ ..|.|.|.|.++++.|+++|+.+..+
T Consensus       321 ~~~~~~~~l~a~s~~ek~~W~~~i~~~~~~  350 (354)
T 1dbh_A          321 LKDENSVIFSAKSAEEKNNWMAALISLQYR  350 (354)
T ss_dssp             CTTSCCEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred             cCCCCEEEEEeCCHHHHHHHHHHHHHHHhh
Confidence            774 78999999999999999999998743

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D

Probab=98.28  E-value=2.2e-05  Score=61.86  Aligned_cols=104  Identities=17%  Similarity=0.088  Sum_probs=74.7

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc------CCCCceEEE
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV------LNKPFAFEH   97 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~------~~~~~~f~I   97 (144)
                      ....+++|.|.+.....+..+.|+|+|-++.|.+.+...........++.|+|..+... ...+.      ...+++|.|
T Consensus       331 ~r~li~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~-~~~d~~~~~~~~~~~~~F~i  409 (466)
T 2pz1_A          331 SSELIYSGELTRVTQPQAKSQQRMFFLFDHQLIYCKKDLLRRDVLYYKGRLDMDGLEVV-DLEDGKDRDLHVSIKNAFRL  409 (466)
T ss_dssp             CSCEEEEEEEEEECTTTCCEEEEEEEEETTEEEEEEECSSCTTCEEEEEEEETTTCEEE-ECCSBSCCSSCCCBCEEEEE
T ss_pred             cceeEEeeeEEEEecCCCCeeEEEEEEECCEEEEEEeccccCCceEEeeeeeccceEEE-eCCCCcccccccccceeEEE
Confidence            34556899998876434567899999999999998865300112234678899885443 33221      134589999


Q ss_pred             EeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           98 SRG--GYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        98 ~~~--~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      ...  ...|.|+|.|.+++..|+++|+.++.+.
T Consensus       410 ~~~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~~  442 (466)
T 2pz1_A          410 HRGATGDSHLLCTRKPEQKQRWLKAFAREREQV  442 (466)
T ss_dssp             ECSSSCCEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence            965  5689999999999999999999988753

>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1

Probab=98.27  E-value=2.8e-05  Score=60.28  Aligned_cols=102  Identities=16%  Similarity=-0.042  Sum_probs=72.9

Q ss_pred             cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc------CCCCceEEEE
Q 035610           25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV------LNKPFAFEHS   98 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~------~~~~~~f~I~   98 (144)
                      ...+++|.|.+.....+..+.|+|+|-++.|.+.+...........++.|+|..+. |....+.      ...+++|.|.
T Consensus       255 r~Li~~G~l~~~~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~-v~~~~d~~~~~~~~~~~~~F~i~  333 (402)
T 2dfk_A          255 SELIYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYE-VIDIEDGRDDDFNVSMKNAFKLH  333 (402)
T ss_dssp             CCEEEEEEEEEESSTTCCCEEEEEEEETTEEEEEEECSSCTTCEEEEEEEEGGGEE-EEECCSEECSSSCCEESSEEEEE
T ss_pred             cceEEeceEEEEeccCCceEEEEEEeeCCEEEEEEeccccCCceEEeeeeeccceE-EEecCCCCccccccccceeEEEE
Confidence            34557899987764345678999999999999988653001122346788998844 3333221      1235899999


Q ss_pred             eC--CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           99 RG--GYTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        99 ~~--~~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      ..  ...|.|+|.|.+++..|+++|+.++..
T Consensus       334 ~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~  364 (402)
T 2dfk_A          334 NKETEEVHLFFAKKLEEKIRWLRAFREERKM  364 (402)
T ss_dssp             ESSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             ECCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence            65  468999999999999999999997765

>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A

Probab=98.19  E-value=3.3e-05  Score=59.83  Aligned_cols=102  Identities=11%  Similarity=0.003  Sum_probs=73.6

Q ss_pred             cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc---CCCCceEEEEe--
Q 035610           25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV---LNKPFAFEHSR--   99 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~---~~~~~~f~I~~--   99 (144)
                      .+..++|.|.......+..+.|+++|-++.|.+.+...   .....+..|+|..+......+..   ...+++|.|..  
T Consensus       232 grli~~G~l~~~~~~~~~~~~~~~fLF~d~Ll~~k~k~---~~y~~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~~  308 (406)
T 2vrw_B          232 GRPKIDGELKITSVERRSKTDRYAFLLDKALLICKRRG---DSYDLKASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQ  308 (406)
T ss_dssp             CSEEEEEEEEEECSSCCSCEEEEEEEESSEEEEEEEET---TEEEEEEEEETTTEEEEC--------CTTCEEEEEEETT
T ss_pred             CcccccccEEEEecCCCccceEEEEecCCEEEEEEecC---CceEEEEEecccceeeeecCCCCccCCccceeeEEEecC
Confidence            34568899988754445678999999999999887653   12345678888884433222211   13468999986  


Q ss_pred             CCeEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610          100 GGYTMYSVADTEKEKGERINSIGRAIVQHS  129 (144)
Q Consensus       100 ~~~~~~l~a~s~~e~~~Wi~al~~ai~~~~  129 (144)
                      +.+.|.|.|.|.++++.|+++|+.++....
T Consensus       309 ~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~  338 (406)
T 2vrw_B          309 GAQGYELFFKTRELKKKWMEQFEMAISNIY  338 (406)
T ss_dssp             CSCEEEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred             CCceEEEeCCCHHHHHHHHHHHHHHHhhhh
Confidence            467899999999999999999999987654

>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A

Probab=98.14  E-value=2.5e-05  Score=63.35  Aligned_cols=102  Identities=11%  Similarity=0.020  Sum_probs=75.7

Q ss_pred             cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc---cCCCCceEEEEeCC
Q 035610           25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED---VLNKPFAFEHSRGG  101 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~---~~~~~~~f~I~~~~  101 (144)
                      .+..++|.|.+.....+..+.|+++|-++.|.+.+...   .....+..|+|..+......+.   ....+++|.|....
T Consensus       404 grll~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~---~~y~~k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~  480 (587)
T 3ky9_A          404 GRPKIDGELKITSVERRSKMDRYAFLLDKALLICKRRG---DSYDLKDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQ  480 (587)
T ss_dssp             CCEEEEEEEEEECSSCCSCEEEEEEEETTEEEEEEEET---TEEEEEEEEEGGGEEEEEC-----CCCTTCEEEEEEETT
T ss_pred             CceEEEeeEEEEeccCCCcceEEEEEECCEEEEEEecC---CEEEeeeeechhhceeeecCCCCcccccccceeEEEEcC
Confidence            44568999988765556789999999999999887653   1345678899998544322221   12356899999765


Q ss_pred             --eEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610          102 --YTMYSVADTEKEKGERINSIGRAIVQHS  129 (144)
Q Consensus       102 --~~~~l~a~s~~e~~~Wi~al~~ai~~~~  129 (144)
                        +.|.|.|.|.++++.|+++|+.++....
T Consensus       481 ~~~~~~L~A~S~eeK~~Wi~~I~~ai~~~~  510 (587)
T 3ky9_A          481 GAQGYELFFKTRELKKKWMEQFEMAISNIY  510 (587)
T ss_dssp             C---CEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHHHhhhhc
Confidence              7899999999999999999999997654

>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}

Probab=98.10  E-value=3.9e-05  Score=53.61  Aligned_cols=99  Identities=10%  Similarity=0.015  Sum_probs=65.0

Q ss_pred             cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCC---CCCCCCcceEEeCCceEEEeeccccCCCCceEEEEe-C
Q 035610           25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHN---ITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSR-G  100 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~---~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~-~  100 (144)
                      ....++|-|..+... +.++.+|++|-++.|.+...+..   ..........|.|.++ .|.....  . ..+|-++. .
T Consensus        69 R~Ll~eG~L~~k~~~-~~~~d~~~fLf~D~Ll~~~~~~~ky~~~~~~~~~pvi~L~~~-~vre~a~--d-~~~~fli~~~  143 (185)
T 2lg1_A           69 KKLVRDGSVFLKNAA-GRLKEVQAVLLTDILVFLQEKDQKYIFASLDQKSTVISLKKL-IVREVAH--E-EKGLFLISMG  143 (185)
T ss_dssp             SCEEEEEEEEEECTT-CCEEEEEEEEESSEEECCEEETTEEECCCCSSSCSEEESSSC-EEECCSS--C-SSEEEEECCS
T ss_pred             CceeeeceEEEeccC-CCeeeEEEEeecCEEEEEEecCCEEEEEcccCCCCeEeecce-EEeccCC--C-CCeEEEEEec
Confidence            355689999755432 37899999999998877654321   0000112356778874 4443322  2 23454543 2


Q ss_pred             ---CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          101 ---GYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       101 ---~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                         .+.|-|.|.|..+++.|+.+|+.|+...
T Consensus       144 ~~g~~~yel~a~s~~er~~W~~~I~~Ai~~~  174 (185)
T 2lg1_A          144 MTDPEMVEVHASSKEERNSWIQIIQDTINTL  174 (185)
T ss_dssp             SSCCCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEEcCCHHHHHHHHHHHHHHHHhC
Confidence               4689999999999999999999998654

>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A

Probab=98.05  E-value=5.8e-05  Score=63.09  Aligned_cols=97  Identities=18%  Similarity=0.179  Sum_probs=71.2

Q ss_pred             CceEEEEEeeC--CCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-cCCCCceEEEEeCC--
Q 035610           27 PGAIGPANKQG--DYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-VLNKPFAFEHSRGG--  101 (144)
Q Consensus        27 ~~~~G~L~k~~--~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-~~~~~~~f~I~~~~--  101 (144)
                      ....|||....  ...+.-+..||||....|.||+++.    ....+.+++|++ ..++..+. .+.+++.|.|..++  
T Consensus       540 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  614 (772)
T 3zvr_A          540 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDE----EKEKKYMLSVDN-LKLRDVEKGFMSSKHIFALFNTEQR  614 (772)
T ss_dssp             EEEEEEEEESSSCCC---CCEEEEEEESSEEEEESSTT----CCCEEEEEECTT-EEEEEC-------CEEEEEEETTSS
T ss_pred             ceeeeeeeecccccccCCCccceeeccccccccccchh----hhcccccccccc-cccchhhhccccccccccccCCccc
Confidence            56789999864  3335678899999999999999976    556788999988 55655554 35677999999654  


Q ss_pred             ------eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          102 ------YTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       102 ------~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                            +++-++|++.++.+.|...+.+|-+.+
T Consensus       615 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  647 (772)
T 3zvr_A          615 NVYKDYRQLELACETQEEVDSWKASFLRAGVYP  647 (772)
T ss_dssp             CSBTTBSEEEEEESSHHHHHHHHHHHHHTTCCB
T ss_pred             cccchhhhhhhhccccccchhhHHhhhhcccCC
Confidence                  467799999999999999997765444

>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}

Probab=97.97  E-value=0.00019  Score=55.69  Aligned_cols=101  Identities=12%  Similarity=0.028  Sum_probs=69.7

Q ss_pred             cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCC--------------CCCCCcceEEeCCceEEEeeccccCC
Q 035610           25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNI--------------TRGSTPRGFIPVGTCLTVKCAEDVLN   90 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~--------------~~~~~~~~~i~L~~~~~v~~~~~~~~   90 (144)
                      ...+++|.|.+... .+.++.|+++|-++.|.+.+.....              .........|.|.++ .|....   +
T Consensus       293 r~li~eG~l~~~~~-~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~~-~v~~~~---~  367 (418)
T 3t06_A          293 RKMIHEGPLTWRIS-KDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAV-LIRSVA---T  367 (418)
T ss_dssp             SCEEEEEEEEECCB-TTBCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGE-EEEECS---S
T ss_pred             ceeEEeceEEEEeC-CCCeEEEEEEecCCEEEEEEEcCCceEEeecccccccCCCcccccCCceechhc-eecccc---c
Confidence            34558999987653 2468899999999999988754310              001122467888884 444332   3


Q ss_pred             CCceEEEEeC-----CeEEEEEcCCHHHHHHHHHHHHHHHHhcCC
Q 035610           91 KPFAFEHSRG-----GYTMYSVADTEKEKGERINSIGRAIVQHSR  130 (144)
Q Consensus        91 ~~~~f~I~~~-----~~~~~l~a~s~~e~~~Wi~al~~ai~~~~~  130 (144)
                      ..+.|.|...     .+.|.|.|.|.++++.|+++|++++..+..
T Consensus       368 ~~~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~~~~  412 (418)
T 3t06_A          368 DKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRNAHH  412 (418)
T ss_dssp             CSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHTC--
T ss_pred             cCceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhcCcc
Confidence            4467887753     378999999999999999999999977654

>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*

Probab=97.96  E-value=0.00028  Score=53.75  Aligned_cols=98  Identities=12%  Similarity=0.030  Sum_probs=68.4

Q ss_pred             cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCC--------------CCCCCcceEEeCCceEEEeeccccCC
Q 035610           25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNI--------------TRGSTPRGFIPVGTCLTVKCAEDVLN   90 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~--------------~~~~~~~~~i~L~~~~~v~~~~~~~~   90 (144)
                      ...+++|.|..... .+..+.|+++|-++.|.+.+...+.              ......++.|+|.++ .|....   +
T Consensus       251 R~li~~G~l~~~~~-~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~~-~v~~~~---~  325 (368)
T 1xcg_A          251 RKMIHEGPLTWRIS-KDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAV-LIRSVA---T  325 (368)
T ss_dssp             SCEEEEEEEEECCS-SSCCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGE-EEEECS---S
T ss_pred             ceEEeecceEeeec-CCCeeEEEEEcccccHHHhhcccccceeeeccccccCCCCcccCcCCceEccce-eeeccc---C
Confidence            34557899886542 3467899999999999988764310              001122567888884 444322   3


Q ss_pred             CCceEEEEeC-----CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           91 KPFAFEHSRG-----GYTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        91 ~~~~f~I~~~-----~~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      .+++|.+...     ...|.|+|.|.++++.|+++|+.|+..
T Consensus       326 ~~~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~~  367 (368)
T 1xcg_A          326 DKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN  367 (368)
T ss_dssp             CSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence            4578887743     478999999999999999999999864

>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A

Probab=97.92  E-value=9.8e-05  Score=55.91  Aligned_cols=89  Identities=18%  Similarity=0.050  Sum_probs=63.8

Q ss_pred             ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCC-----cceEEeCCceEEEeecccc--------------
Q 035610           28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGST-----PRGFIPVGTCLTVKCAEDV--------------   88 (144)
Q Consensus        28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~-----~~~~i~L~~~~~v~~~~~~--------------   88 (144)
                      .++|.|.+..+     +.|+++|-++.|.+.+... .  ...     .+..|+|..+. +....+.              
T Consensus       233 i~~G~l~~~~~-----~~~~~fLF~d~Ll~~k~~~-~--~~~~~~~v~k~~i~l~~l~-v~~~~d~~~~~~~s~~g~~~~  303 (346)
T 2z0q_A          233 CCHGELKNNRG-----VKLHVFLFQEVLVITRAVT-H--NEQLCYQLYRQPIPVKDLT-LEDLQDGEVRLGGSLRGAFSN  303 (346)
T ss_dssp             EEEEEEEETTS-----CEEEEEEESSEEEEEEEEE-E--TTEEEEEESSCCEEGGGCE-EEECCTTTSCCCSCC--CCSH
T ss_pred             EEeceeEECCC-----cEEEEEECCCcEEEEEEec-c--CCceeeeeecCCcchhhce-eeecCCCccccCccccccccC
Confidence            56898876432     7899999999999887642 0  111     24568888844 4333221              


Q ss_pred             -CCCCceEEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHH
Q 035610           89 -LNKPFAFEHSR----GGYTMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus        89 -~~~~~~f~I~~----~~~~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                       ...+++|.|..    +...|.|+|.|.++++.|+++|+.|+
T Consensus       304 ~~~~~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai  345 (346)
T 2z0q_A          304 NERVKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAK  345 (346)
T ss_dssp             HHHTSSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CcccccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhh
Confidence             02368999985    36789999999999999999999987

>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A

Probab=97.91  E-value=0.00021  Score=54.39  Aligned_cols=101  Identities=12%  Similarity=0.035  Sum_probs=68.5

Q ss_pred             cCCceEEEEEeeCC---C--------CCCceeEEEEEeCCeEEEEecCCCCC------CCCCcceEEeCCceEEEeeccc
Q 035610           25 SQPGAIGPANKQGD---Y--------IKTWLRRWFILKQGEHFWFKDSHNIT------RGSTPRGFIPVGTCLTVKCAED   87 (144)
Q Consensus        25 ~~~~~~G~L~k~~~---~--------~~~w~~R~fvL~~~~l~y~k~~~~~~------~~~~~~~~i~L~~~~~v~~~~~   87 (144)
                      .+.+++|.+....+   +        ....+.|++.|-++.|.+.+......      .....+..|+|..+ .+.... 
T Consensus       208 g~ll~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~~y~~k~~i~l~~~-~v~e~~-  285 (353)
T 1kz7_A          208 GKLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAV-GITENV-  285 (353)
T ss_dssp             CCEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGE-EEECCB-
T ss_pred             hhhheecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEeccccccCCCCCCeEEEEEEeEcccc-eeeEcC-
Confidence            35567888875311   1        12468899999999999888653000      01123466777774 333222 


Q ss_pred             cCCCCceEEEEe--CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           88 VLNKPFAFEHSR--GGYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        88 ~~~~~~~f~I~~--~~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                       .+.++.|.|..  +...|.+.|.|.++++.|+++|+.++...
T Consensus       286 -~~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~  327 (353)
T 1kz7_A          286 -KGDTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTSQ  327 (353)
T ss_dssp             -TTBTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCceEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence             23568999986  35789999999999999999999987654

>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A

Probab=97.91  E-value=0.00024  Score=53.04  Aligned_cols=100  Identities=12%  Similarity=0.041  Sum_probs=68.2

Q ss_pred             CCceEEEEEeeCC--CCCCceeEEEEEeCCeEEEEecCCCCC--CCCCcceEEeCCceEEEeeccccCCCCceEEEEe--
Q 035610           26 QPGAIGPANKQGD--YIKTWLRRWFILKQGEHFWFKDSHNIT--RGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSR--   99 (144)
Q Consensus        26 ~~~~~G~L~k~~~--~~~~w~~R~fvL~~~~l~y~k~~~~~~--~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~--   99 (144)
                      +....|.+....+  ..+..+.|++.|-++.|.+.+......  .....++.|+|..+ .|....+  +.++.|.|..  
T Consensus       202 ~li~~~~~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~y~~k~~i~l~~~-~v~e~~~--~~~~~F~i~~~~  278 (311)
T 1nty_A          202 ELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSEL-GVTEHVE--GDPCKFALWVGR  278 (311)
T ss_dssp             CEEEEEEEEEECSSSSSCCEEEEEEEEESSEEEEEEEEECTTCCEEEEEEEEEEGGGE-EEECCCT--TCTTEEEEEESS
T ss_pred             CceeeeeEEEEcCcccccccceeEEEeccCeEEEEEeeccCCCCceeEEeeeeeccce-eeEEccC--CCCceEEEEeCC
Confidence            4445676655432  235678999999999999887642000  01123567788874 3433222  3568899986  


Q ss_pred             ---CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          100 ---GGYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       100 ---~~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                         +...+.+.|.|.++++.|+++|+.++.+.
T Consensus       279 ~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e~  310 (311)
T 1nty_A          279 TPTSDNKIVLKASSIENKQDWIKHIREVIQER  310 (311)
T ss_dssp             SCCTTTCEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCceEEEECCCHHHHHHHHHHHHHHHhhh
Confidence               34678899999999999999999998653

>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A

Probab=97.90  E-value=0.00022  Score=54.47  Aligned_cols=99  Identities=9%  Similarity=0.026  Sum_probs=66.1

Q ss_pred             CCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCC--CCCC------------CCcceEEeCCceEEEeeccccCCC
Q 035610           26 QPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHN--ITRG------------STPRGFIPVGTCLTVKCAEDVLNK   91 (144)
Q Consensus        26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~--~~~~------------~~~~~~i~L~~~~~v~~~~~~~~~   91 (144)
                      .-+++|.|..+... +.++.|+++|-++.|.+.+.+..  ..+.            ......|.|..+ .+.....  ..
T Consensus       258 ~li~eG~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~k~~k~~~k~~~~~~~~~~~~k~~~~~~i~l~~~-~v~e~~~--~~  333 (377)
T 3p6a_A          258 KLVHEGPLTWRVTK-DKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSA-MTREVAT--DH  333 (377)
T ss_dssp             CEEEEEEEEEESSS-SCEEEEEEEEESSEEEEEEEETTEEECCCCCCC---------CSCSEEEGGGE-EEEECTT--CT
T ss_pred             eEEEECCcEEEecC-CCeEEEEEEeeCCEEEEEEEcCceeEEeecccccccCccccCCCCCeEechhh-hcccccc--cc
Confidence            44579999766432 37899999999999998875431  0000            011346788884 4444322  23


Q ss_pred             CceEEEEe---CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           92 PFAFEHSR---GGYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        92 ~~~f~I~~---~~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      ...|.+..   +...|.+.|.|.++++.|++.|++|+...
T Consensus       334 ~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~~~  373 (377)
T 3p6a_A          334 KAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSL  373 (377)
T ss_dssp             TEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred             ceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhc
Confidence            34455553   34678899999999999999999999654

>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A

Probab=97.85  E-value=0.00036  Score=53.58  Aligned_cols=99  Identities=16%  Similarity=0.054  Sum_probs=66.7

Q ss_pred             CCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCC--------------CCCCCcceEEeCCceEEEeeccccCCC
Q 035610           26 QPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNI--------------TRGSTPRGFIPVGTCLTVKCAEDVLNK   91 (144)
Q Consensus        26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~--------------~~~~~~~~~i~L~~~~~v~~~~~~~~~   91 (144)
                      .-+++|.|...... +..+.|+++|-++.|.+.+.....              ......++.|.|.++ .|.....  ..
T Consensus       256 ~li~eG~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~-~v~~~~~--d~  331 (385)
T 1txd_A          256 KMIHEGPLVWKVNR-DKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLSTV-LVRQVAT--DN  331 (385)
T ss_dssp             CEEEEEEEEEESSS-SCBCCEEEEEESSEEEEEEEETTEEECCC-------------CCCSEEEGGGE-EEEECCC---C
T ss_pred             eEEEECcEEEEcCC-CCeEEEEEEecCCeeEEEEecCCeeEEeeccccccccCCCCcCCCCceecccc-ccccccc--CC
Confidence            44578998765432 467899999999999887754200              001123567888884 4443322  23


Q ss_pred             CceEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           92 PFAFEHSRG---GYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        92 ~~~f~I~~~---~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      ++.|.|...   .+.|.|+|.|.++++.|+++|++++...
T Consensus       332 ~~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~  371 (385)
T 1txd_A          332 KALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASV  371 (385)
T ss_dssp             CEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence            456666642   4688899999999999999999988764

>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B

Probab=97.84  E-value=2.2e-06  Score=68.02  Aligned_cols=97  Identities=16%  Similarity=-0.026  Sum_probs=0.0

Q ss_pred             CceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCC--CC------------C-CcceEEeCCceEEEeeccccCCC
Q 035610           27 PGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNIT--RG------------S-TPRGFIPVGTCLTVKCAEDVLNK   91 (144)
Q Consensus        27 ~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~--~~------------~-~~~~~i~L~~~~~v~~~~~~~~~   91 (144)
                      ..++|.|.+.    +..+.|+|+|-++.|.+.+......  ..            . .-+..|+|+++ .|...++..+.
T Consensus       253 li~eG~l~~~----~~~~~~~~fLF~d~Ll~~k~~~~~~~~~g~~~~f~~~~~~~~~v~k~~i~l~~~-~v~~~~d~~~~  327 (510)
T 3jzy_A          253 LLHSGKLYKT----KSNKELHGFLFNDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFKMYKTPIFLNEV-LVKLPTDPSSD  327 (510)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             eEEeceEEEc----CCCcEEEEEcccceeEEeeecccccccCCcccccCcccccceeEEcCceehhhe-EEeccCCCCcc
Confidence            3456666554    3468999999999998877543000  00            0 01455677773 44444333467


Q ss_pred             CceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           92 PFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        92 ~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      +++|.|....+.|.++|.|.+++..|+++|++++...
T Consensus       328 ~~~F~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~  364 (510)
T 3jzy_A          328 EPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQY  364 (510)
T ss_dssp             -------------------------------------
T ss_pred             ccceeeeccceeEEeccCCHHHHHHHHHHHHHHHHHH
Confidence            7999999999999999999999999999999988654

>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A

Probab=97.84  E-value=0.00028  Score=56.73  Aligned_cols=100  Identities=11%  Similarity=0.020  Sum_probs=65.8

Q ss_pred             CCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCC--CCCC------------CCcceEEeCCceEEEeeccccCCC
Q 035610           26 QPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHN--ITRG------------STPRGFIPVGTCLTVKCAEDVLNK   91 (144)
Q Consensus        26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~--~~~~------------~~~~~~i~L~~~~~v~~~~~~~~~   91 (144)
                      .-+++|.|...... +.++.|+|+|-++.|.+.+.+..  ..+.            ......|.|..+ .|....   ..
T Consensus       411 ~LI~eG~l~~~~~~-~k~~~r~~fLF~D~LL~~k~k~~ky~~k~~~~~~~~~~d~k~~~~~~i~L~~l-~v~e~~---~d  485 (536)
T 3odw_A          411 KLVHEGPLTWRVTK-DKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSA-MTREVA---TD  485 (536)
T ss_dssp             CEEEEEEEEEESCC----CEEEEEEESSEEEEEEEETTEEECCCC------------CCCSEEEGGGE-EEEECT---TC
T ss_pred             eeeeecceEEEecC-CCeeEEEEEEcCCEEEEEEEcCCeEEEeecccccccccccccccCceeecccc-eeeccc---cc
Confidence            45578999777532 36789999999999998875431  0000            012346888884 444432   22


Q ss_pred             CceEEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHHhcCC
Q 035610           92 PFAFEHSR----GGYTMYSVADTEKEKGERINSIGRAIVQHSR  130 (144)
Q Consensus        92 ~~~f~I~~----~~~~~~l~a~s~~e~~~Wi~al~~ai~~~~~  130 (144)
                      ..+|.+..    ....|.|.|.|.++++.|++.|++||.....
T Consensus       486 ~~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~~~  528 (536)
T 3odw_A          486 HKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSLKV  528 (536)
T ss_dssp             TTEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHTSCC
T ss_pred             CCceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhCCC
Confidence            34455543    3568899999999999999999999977654

>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}

Probab=97.70  E-value=0.0008  Score=51.16  Aligned_cols=100  Identities=9%  Similarity=-0.048  Sum_probs=66.5

Q ss_pred             CCceEEEEEeeCC-----CCCCceeEEEEEeCCeEEEEecCCCCC-----CCCCcceEEeCCceEEEeeccccCCCCceE
Q 035610           26 QPGAIGPANKQGD-----YIKTWLRRWFILKQGEHFWFKDSHNIT-----RGSTPRGFIPVGTCLTVKCAEDVLNKPFAF   95 (144)
Q Consensus        26 ~~~~~G~L~k~~~-----~~~~w~~R~fvL~~~~l~y~k~~~~~~-----~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f   95 (144)
                      +....|-+....+     ..+..+.|+++|-++.|.+.+......     .....+..|+|..+ .+....+  +.++.|
T Consensus       206 ~Ll~~g~~~v~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~y~~k~~i~l~~~-~v~~~~~--~~~~~F  282 (354)
T 2rgn_B          206 KLLGQDTFWVTEPEAGGLLSSRGRERRVFLFEQIIIFSEALGGGVRGGTQPGYVYKNSIKVSCL-GLEGNLQ--GDPCRF  282 (354)
T ss_dssp             CEEEEEEEEEECC-------CCCCEEEEEEESSEEEEEEECC--------CCEEEEEEEEGGGE-EEEESGG--GCTTEE
T ss_pred             cccccceEEEEcCCcCccccCCCceEEEEEeCCcEEEEEeccCCCCCCCCCceEEcceeeccce-eeeeccC--CCCceE
Confidence            3445676654421     124678999999999999888653000     01223467788774 3332222  346889


Q ss_pred             EEEeC-----CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           96 EHSRG-----GYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        96 ~I~~~-----~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      .|...     ...|.|.|.|.++++.|+++|++++..+
T Consensus       283 ~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~  320 (354)
T 2rgn_B          283 ALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILESQ  320 (354)
T ss_dssp             EEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence            99852     3688999999999999999999988654

>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A

Probab=97.68  E-value=0.00033  Score=60.49  Aligned_cols=96  Identities=15%  Similarity=0.089  Sum_probs=71.1

Q ss_pred             cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCC-------CCCCCcceEEeCCceEEEeeccccCCCCceEEE
Q 035610           25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNI-------TRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEH   97 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~-------~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I   97 (144)
                      ..-.++|.|.+.+..    +.|++.|-++.|.+.+.....       ......++.|+|..+. |...++....+++|.|
T Consensus       442 r~Li~eG~l~~~~~k----~~r~~FLF~D~Ll~~K~~~~~~~~~g~~~~~y~~k~~i~L~~l~-V~~~~d~~~~~~~F~I  516 (1049)
T 3ksy_A          442 NEFIMEGTLTRVGAK----HERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQ-INDKDDTNEYKHAFEI  516 (1049)
T ss_dssp             SCCCCEEEEEETTCS----SCEEEEEETTEEEEEECCTTCCCCTTSCCCSCCCCCEECCSSCC-CCCCCCSSSCCSEEEE
T ss_pred             ceEEEeceEEEEccC----ceEEEEeeCCeEEEEEecCccCCCCCCCCCceEEEEEEEcCceE-EEECCCCccccceEEE
Confidence            345689999887633    889999999999998876310       0123457788888844 4444433356799999


Q ss_pred             EeCC-eEEEEEcCCHHHHHHHHHHHHHHH
Q 035610           98 SRGG-YTMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus        98 ~~~~-~~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      ...+ ..|.|.|.|.++++.|+++|+.+.
T Consensus       517 ~~~~~~~~~L~A~S~eeK~~Wi~~I~~~q  545 (1049)
T 3ksy_A          517 ILKDENSVIFSAKSAEEKNNWMAALISLQ  545 (1049)
T ss_dssp             CCTTSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred             EcCCCCEEEEeCCCHHHHHHHHHHHHHHH
Confidence            8765 489999999999999999998754

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=97.47  E-value=0.0039  Score=51.60  Aligned_cols=94  Identities=16%  Similarity=0.267  Sum_probs=67.6

Q ss_pred             ecCCceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC-C
Q 035610           24 WSQPGAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG-G  101 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~-~  101 (144)
                      ...+.+.|++.|+++ ....|++|++.|..+.+.+....      ..+...+.++.+..|....  ....++|.+... .
T Consensus       556 ~~~~i~~G~~~k~~g~f~~~~~rR~~~l~p~r~e~~~e~------~~~~~l~~~~~v~~v~k~~--i~~~~~l~~~~k~~  627 (689)
T 3v5w_A          556 GKDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEG------EAPQSLLTMEEIQSVEETQ--IKERKCLLLKIRGG  627 (689)
T ss_dssp             SSCCCEEEEEEEC-------CEEEEEEEETTEEEEECTT------SCCCEEEEGGGEEEEEEEE--SSSCEEEEEEETTT
T ss_pred             CCcceeecccccCCCcccchhhhhccccCCCcccccccC------CCCcceeeeccccccccCc--CCCCcceeeeecCC
Confidence            356778999999975 45699999999999988765432      3456677888866654332  345578888865 5


Q ss_pred             eEEEEEcCCHHHHHHHHHHHHHHH
Q 035610          102 YTMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus       102 ~~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      +.+++.+++..++.+|+..|+.+-
T Consensus       628 k~f~~~t~~~~~~~~W~~~i~~~~  651 (689)
T 3v5w_A          628 KQFILQCDSDPELVQWKKELRDAY  651 (689)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             cEEEEECCChHHHHHHHHHHHHHH
Confidence            778899999999999999998754

>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1

Probab=97.35  E-value=0.0079  Score=45.90  Aligned_cols=102  Identities=10%  Similarity=-0.036  Sum_probs=63.0

Q ss_pred             CCceEEEEEeeCC-----CCCCceeEEEEEeCCeEEE-EecCCC-C--------------CCCCCcceEEeCCceEEEee
Q 035610           26 QPGAIGPANKQGD-----YIKTWLRRWFILKQGEHFW-FKDSHN-I--------------TRGSTPRGFIPVGTCLTVKC   84 (144)
Q Consensus        26 ~~~~~G~L~k~~~-----~~~~w~~R~fvL~~~~l~y-~k~~~~-~--------------~~~~~~~~~i~L~~~~~v~~   84 (144)
                      +....|.+.....     ..+.-+.|++.|-++.|.+ .+.... .              ......++.|+|..+ .|..
T Consensus       237 ~ll~~~~~~~~~~~~~~~~~~k~~~~~~fLF~d~lll~~k~~~~~k~~~~~~~~~s~~~~~~~y~~k~~i~l~~~-~v~~  315 (377)
T 1foe_A          237 DLLLHTSVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLVGSHRLSIYEEWDPFRFRHMIPTEAL-QVRA  315 (377)
T ss_dssp             GEEEEEEEEESSCCHHHHTTCSSCEEEEEEETTEEEEEECCCCCSCCSSCCCTTTTCSSCSCSCCCEEEEEGGGE-EEEC
T ss_pred             ceeeecceeeccCchhhccccccceEEEEEcCCeEEEEeccccccccccccccccccccCCCceeEeeeccccce-EEEe
Confidence            3445666554321     2234578999999998665 342110 0              002234578889884 4444


Q ss_pred             ccc-cCCCCceEEEE--------eCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           85 AED-VLNKPFAFEHS--------RGGYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        85 ~~~-~~~~~~~f~I~--------~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      ..+ .......|.|.        .+.+.|.++|.|.++++.|+++|.+++...
T Consensus       316 ~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~~~  368 (377)
T 1foe_A          316 LPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDK  368 (377)
T ss_dssp             CCCTTTTSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCccchhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHhhHH
Confidence            333 21222347776        235789999999999999999999998653

>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1

Probab=96.53  E-value=0.019  Score=39.56  Aligned_cols=55  Identities=11%  Similarity=0.073  Sum_probs=42.6

Q ss_pred             eEEeCCceEEEeeccccCCCCceEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610           72 GFIPVGTCLTVKCAEDVLNKPFAFEHSRGG--YTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus        72 ~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~--~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      ..|+|..|...+.....-..++.|+|..++  .+.+|.|.+..++.+|+.+|...|.
T Consensus       121 ~~IPLkMayvtR~~~~tD~e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~sni~  177 (178)
T 2adz_A          121 KHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG  177 (178)
T ss_dssp             EEEETTTCEEEEECCSSCCSSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHHHHT
T ss_pred             eeecHHHHHHHHhccCCCCCccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHHHhcc
Confidence            678898876655443211367899999875  4668899999999999999998773

>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}

Probab=96.52  E-value=0.027  Score=41.23  Aligned_cols=54  Identities=11%  Similarity=0.094  Sum_probs=41.7

Q ss_pred             eEEeCCceEEEeeccccCCCCceEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHH
Q 035610           72 GFIPVGTCLTVKCAEDVLNKPFAFEHSRGG--YTMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus        72 ~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~--~~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      +.++|..|...+.....-.++++|+|..++  .+.+|.|.+..++.+|+.+|..+|
T Consensus       206 ~~ipL~m~~~tR~~~~~d~~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~~i  261 (263)
T 1z87_A          206 KHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQI  261 (263)
T ss_dssp             EEEESSSEEEEEECCSSCSSSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             cccCcceeeeeeeccccCCCCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHHHh
Confidence            677888866544332212378999999764  567899999999999999999987

>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1

Probab=95.96  E-value=0.092  Score=33.78  Aligned_cols=99  Identities=8%  Similarity=-0.004  Sum_probs=66.6

Q ss_pred             eecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCC-CCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC
Q 035610           23 FWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHN-ITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG  101 (144)
Q Consensus        23 ~~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~-~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~  101 (144)
                      ...+..+.|.+....+. +.-+.|++.|-...|.+.+.... ..+...-+..|.++.+......++  +.+..|.|-.++
T Consensus         6 ~~G~Ll~q~~f~V~~~~-~k~~eR~vFLFe~~ilf~K~~~~~~~~~Y~~K~~ikl~~~~lte~~~~--~d~~kFeiw~~~   82 (119)
T 1fho_A            6 KLGRIIRHDAFQVWEGD-EPPKLRYVFLFRNKIMFTEQDASTSPPSYTHYSSIRLDKYNIRQHTTD--EDTIVLQPQEPG   82 (119)
T ss_dssp             CCCCSSEEEEEEECSTT-CSCEEEEEEEETTEEEEEEECCSSSSCCCSSCCEEESSSCEEEEECTT--CCEEEEECCSTT
T ss_pred             HcCCccccCceEEEeCC-CCcceEEEEEecCcEEEEEEecCCCCCcEEEeeEEeeceeEEEecCCC--CCCcEEEEccCC
Confidence            34566777888777543 56788999999999999887521 112344567888887433222221  334568886443


Q ss_pred             --eEEEE--EcCCHH-HHHHHHHHHHHH
Q 035610          102 --YTMYS--VADTEK-EKGERINSIGRA  124 (144)
Q Consensus       102 --~~~~l--~a~s~~-e~~~Wi~al~~a  124 (144)
                        ..|.+  .|.|.+ .++.|+..|+..
T Consensus        83 ~~~~~il~~qA~s~e~~K~~Wv~~I~~~  110 (119)
T 1fho_A           83 LPSFRIKPKDFETSEYVRKAWLRDIAEE  110 (119)
T ss_dssp             CCCBCCCCCSSSSCSHHHHHHHHHHHTC
T ss_pred             CCceEEEeeecCCcHHHHHHHHHHHHHH
Confidence              45566  899999 999999999873

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=92.54  E-value=1.3  Score=37.31  Aligned_cols=78  Identities=6%  Similarity=-0.038  Sum_probs=53.9

Q ss_pred             eeEEEEEeCC--eEEEEecCCCCCCCCCcceEEeCCceEEEeeccccC-------------------CCCceEEEEeCC-
Q 035610           44 LRRWFILKQG--EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVL-------------------NKPFAFEHSRGG-  101 (144)
Q Consensus        44 ~~R~fvL~~~--~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~-------------------~~~~~f~I~~~~-  101 (144)
                      +.|+|.|...  .|+|. ...      .....+.|+.+..|+......                   ....+|.|+... 
T Consensus        34 k~~~frLd~d~~~l~W~-~~~------k~~~~l~I~~IkeIR~G~~s~~pk~~~~~e~~~~~~~~~~~e~~~fTIvyg~~  106 (799)
T 2zkm_X           34 SPVILRVDPKGYYLYWT-YQS------KEMEFLDITSIRDTRFGKFAKMPKSQKLRDVFNMDFPDNSFLLKTLTVVSGPD  106 (799)
T ss_dssp             EEEEEEECTTSCEEEEE-ETT------SCEEEEEGGGEEEEEEGGGSCCCCSHHHHHHTTCSSTTCCGGGTEEEEEECSS
T ss_pred             eEEEEEEcCCCCEEEEc-cCC------CcCceEeeeeeHHhhcCCCCCCCchHHHHHHhcccCcccccccceEEEEECCC
Confidence            6788889754  34444 332      124689999988887653210                   123689998653 


Q ss_pred             ----eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          102 ----YTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       102 ----~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                          +.+.|.|.+.++++.|+..|+..+...
T Consensus       107 ~~~l~~L~lvA~s~~ea~~Wv~GL~~L~~~~  137 (799)
T 2zkm_X          107 MVDLTFHNFVSYKENVGKAWAEDVLALVKHP  137 (799)
T ss_dssp             SSSCEEEEEEESSSSHHHHHHHHHHHHHHCT
T ss_pred             ccceeEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence                357899999999999999999876543

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=92.14  E-value=2.6  Score=35.61  Aligned_cols=90  Identities=8%  Similarity=0.023  Sum_probs=59.7

Q ss_pred             EEEeeCCCCCCceeEEEEEeCC-eEEEEecCCCCCCCCCcceEEeCCceEEEeecccc--------------CC------
Q 035610           32 PANKQGDYIKTWLRRWFILKQG-EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV--------------LN------   90 (144)
Q Consensus        32 ~L~k~~~~~~~w~~R~fvL~~~-~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~--------------~~------   90 (144)
                      .+.|-+...+..+.|.|.|... ...|++++.    .. ....+.|+.+..|+.....              .+      
T Consensus        27 ~~~K~~~~s~~~~~~~f~lD~d~~~L~W~~~~----k~-~~~~l~I~~I~eVR~G~~t~~pk~~klr~~~~~~g~~~~~~  101 (816)
T 3qr0_A           27 KFLKWEEGSSGFIEILLRVDPKGYFLYWKIEG----KE-DTQLLDLAYVRDIRCAKYAKPPKDKKIKEAGTNFGSSNIPL  101 (816)
T ss_dssp             EEEEECTTCCCCEEEEEEECTTSCEEEECCTT----CS-SCEEEEGGGEEEEEEGGGSCCCCSHHHHHHHHHSSCTTSCH
T ss_pred             eEEEECCCCCcceeEEEEEcCCCCEEEEeCCC----CC-cCcEEEeeeeeeeecCCcCCCCccHHHHHHHHhcCCCcccc
Confidence            4555555444457799999863 333444432    11 1378999988888766441              11      


Q ss_pred             CCceEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610           91 KPFAFEHSRGG-----YTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus        91 ~~~~f~I~~~~-----~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      ...+|.|+...     +.+.|.|.+.++++.|+..|+..+.
T Consensus       102 e~r~fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L~~  142 (816)
T 3qr0_A          102 QDKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYAY  142 (816)
T ss_dssp             HHHEEEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred             cccEEEEEECCCcccceEEEEeeCCHHHHHHHHHHHHHHHH
Confidence            23689999654     3348999999999999999988653

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=90.53  E-value=3  Score=35.58  Aligned_cols=93  Identities=4%  Similarity=-0.049  Sum_probs=59.7

Q ss_pred             eEEE-EEeeCCCCCCceeEEEEEeCC-eEEEEecCCCCCCCCCcceEEeCCceEEEeecccc------------------
Q 035610           29 AIGP-ANKQGDYIKTWLRRWFILKQG-EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV------------------   88 (144)
Q Consensus        29 ~~G~-L~k~~~~~~~w~~R~fvL~~~-~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~------------------   88 (144)
                      +.|- +.|-+...+.-+.++|.|..+ ...|+.++.      .....+.|+.+..|+...+.                  
T Consensus        22 ~~Gt~f~K~~~~~~~~k~~~frLD~d~~~L~W~~~~------ke~~~l~Is~IkeIR~G~~a~~pKd~klr~~~~~~~~~   95 (885)
T 3ohm_B           22 RRGSKFIKWDEETSSRNLVTLRVDPNGFFLYWTGPN------MEVDTLDISSIRDTRTGRYARLPKDPKIREVLGFGGPD   95 (885)
T ss_dssp             HHCEEEEEECTTCCSCCEEEEEECTTSCEEEEECGG------GCEEEEEGGGEEEEEETTTSCCCCSHHHHHCC------
T ss_pred             hCCCeEEEECCCCCCcEEEEEEECCCCCEEEEeCCC------CCCceEeeehhhhhhcCcCCCCCccHHHHHHhccCccc
Confidence            3444 455454433346678888763 334444432      22457889988777765421                  


Q ss_pred             -CCCCceEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           89 -LNKPFAFEHSRGG-----YTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        89 -~~~~~~f~I~~~~-----~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                       .....+|.|+...     ..+.|.|.+.++++.|+..|+..+..
T Consensus        96 ~~~e~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~~  140 (885)
T 3ohm_B           96 ARLEEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAMN  140 (885)
T ss_dssp             ---CTTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHHC
T ss_pred             CcccccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHhh
Confidence             1224689998754     35889999999999999999886543

>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}

Probab=89.36  E-value=2.9  Score=31.05  Aligned_cols=96  Identities=18%  Similarity=0.104  Sum_probs=61.8

Q ss_pred             CCceeEEEEEe-----CCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEEcCCHHHHH
Q 035610           41 KTWLRRWFILK-----QGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKG  115 (144)
Q Consensus        41 ~~w~~R~fvL~-----~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~a~s~~e~~  115 (144)
                      +.=|.||.+|.     .+.+.+++.+.+...-.+....-+|+....|...   .....+|.|.. ++.|+-.|.+..|++
T Consensus       132 kkKK~R~LcLaV~~d~sGRV~LhKaKeN~ngsFsIGKTW~L~ELk~Id~~---~~~~~gF~LTl-~K~YyW~A~s~kER~  207 (320)
T 3a58_A          132 ENKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKD---LEISEGFILTM-SKKYYWETNSAKERT  207 (320)
T ss_dssp             GGEEEEEEEEEECSSCTTCEEEEEEEECGGGCEEEEEEEEGGGCCEEEEC---SSCTTEEEEES-SSEEEEEESSHHHHH
T ss_pred             cccCceEEEEEEecCCCceEEEEEEEecCCCceEecceechhhhhhhhcc---cCCCCceEEEe-CCceEEecCCHHHHH
Confidence            45678998875     3458888875411111123344566665555321   23447788887 789999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCcceeEecc
Q 035610          116 ERINSIGRAIVQHSRSVTESEVVEYD  141 (144)
Q Consensus       116 ~Wi~al~~ai~~~~~~~~~~~~~~~~  141 (144)
                      .+|..|-+...+...+- ..+++.|+
T Consensus       208 ~FI~sLvKiy~KYtgGk-~P~LvNf~  232 (320)
T 3a58_A          208 VFIKSLITLYIQTFEGH-VPELVNWD  232 (320)
T ss_dssp             HHHHHHHHHHHHHTTTC-BCEEESCC
T ss_pred             HHHHHHHHHHHHHcCCC-CCeeeccC
Confidence            99999999776665332 23455544

>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A

Probab=86.19  E-value=6.7  Score=27.34  Aligned_cols=82  Identities=12%  Similarity=0.118  Sum_probs=51.0

Q ss_pred             eEEEEEeCCe-EEEEecCCCCCC----CCCcceEEeCCceEEEeecccc-----C---C-----CCceEEEEeC-CeEEE
Q 035610           45 RRWFILKQGE-HFWFKDSHNITR----GSTPRGFIPVGTCLTVKCAEDV-----L---N-----KPFAFEHSRG-GYTMY  105 (144)
Q Consensus        45 ~R~fvL~~~~-l~y~k~~~~~~~----~~~~~~~i~L~~~~~v~~~~~~-----~---~-----~~~~f~I~~~-~~~~~  105 (144)
                      .+||.|..+. ...|.+-.+...    -......|+|..+..|....+.     .   .     ....|.|... +..+-
T Consensus        50 ~~f~rLs~n~k~L~y~d~~~~~~~~p~ld~l~~kI~ls~Is~V~sg~~~p~~~~~~~~k~~~~~~~laFSii~~~~~~L~  129 (203)
T 3a98_B           50 FWYCRLSPNHKVLHYGDLEESPQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLN  129 (203)
T ss_dssp             EEEEEECTTSSEEEEEECCBCSSCBCCBCCSCCEEEGGGEEEEEEGGGSTTC--------CCTTGGGEEEEEETTTEEEE
T ss_pred             eEEEEECCCCceEEEccccccccCCCChhhcccceeHhhhhHhhcCCCCccccccccccccCcccceEEEEecCCCceEE
Confidence            3577787643 334444321000    0223568889888776543221     0   0     1158888865 46788


Q ss_pred             EEcCCHHHHHHHHHHHHHHHH
Q 035610          106 SVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus       106 l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      |.|.|..+...|++.|+--+.
T Consensus       130 fvA~s~~~~~~W~DGL~~Llg  150 (203)
T 3a98_B          130 FIAPDKHEYCIWTDGLNALLG  150 (203)
T ss_dssp             EECSSHHHHHHHHHHHHHHTT
T ss_pred             EecCCHHHHHHHHHHHHHHhc
Confidence            999999999999999988664

>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}

Probab=86.18  E-value=6.1  Score=26.85  Aligned_cols=86  Identities=15%  Similarity=0.030  Sum_probs=57.9

Q ss_pred             CCceeEEEEEe-----CCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEEcCCHHHHH
Q 035610           41 KTWLRRWFILK-----QGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKG  115 (144)
Q Consensus        41 ~~w~~R~fvL~-----~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~a~s~~e~~  115 (144)
                      ..=|.||.+|.     .+.+..++.+.+.....+...+=+|.....|....   ....+|.|.. ++.|+-.|.+..|+.
T Consensus        62 ~~KK~R~L~lav~~~~sgrV~lhK~K~N~ngsfsiGkTW~L~ELk~Ie~~~---~~~~gF~ltl-~K~Y~W~a~s~~Er~  137 (171)
T 3hie_A           62 ENKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKDL---EISEGFILTM-SKKYYWETNSAKERT  137 (171)
T ss_dssp             GGEEEEEEEEEECTTCTTCEEEEEEEECTTSCEEEEEEEEGGGCCEEEECS---SCTTEEEEES-SSEEEEECSSHHHHH
T ss_pred             CCccceEEEEEEecCCCceEEEEEEEECCCCcEEeeeeeecccceeeeccC---CCCCcEEEEe-CCeEEEecCCHHHHH
Confidence            34688998884     34578888764111111223445666655553321   2457898887 599999999999999


Q ss_pred             HHHHHHHHHHHhcCC
Q 035610          116 ERINSIGRAIVQHSR  130 (144)
Q Consensus       116 ~Wi~al~~ai~~~~~  130 (144)
                      ..|.+|-+...+...
T Consensus       138 ~FI~sL~K~y~ky~~  152 (171)
T 3hie_A          138 VFIKSLITLYIQTFE  152 (171)
T ss_dssp             HHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHcC
Confidence            999999997776653

>2rrf_A Zinc finger FYVE domain-containing protein 21; zfyve21, PH, unknown function; NMR {Homo sapiens}

Probab=84.77  E-value=6.3  Score=25.74  Aligned_cols=77  Identities=10%  Similarity=-0.003  Sum_probs=48.4

Q ss_pred             ceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc------CCCCceEEEEeCC------eEEEE-EcC
Q 035610           43 WLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV------LNKPFAFEHSRGG------YTMYS-VAD  109 (144)
Q Consensus        43 w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~------~~~~~~f~I~~~~------~~~~l-~a~  109 (144)
                      ....-|.|.+++-+.+-+-.       .+..|.|..+..|....+.      ..+..+|.|....      ..+.+ .++
T Consensus        34 ~e~~vCrLS~nhR~L~ldgd-------sh~eIels~I~~vqiL~eg~~~ggg~~rasGm~l~Yk~~g~~~~~ql~lt~~~  106 (141)
T 2rrf_A           34 PETMTCRLSNNQRYLFLDGD-------SHYEIEIVHISTVQILTEGFPPGGGNARATGMFLQYTVPGTEGVTQLKLTVVE  106 (141)
T ss_dssp             CEEEEEEECTTSSEEEEESS-------SEEEEETTTCCCEECCCCSSCSSSSSCCCSCCEEEECCTTSSSCEEEEEECCC
T ss_pred             CceEEEEecCCeeEEEEcCC-------CCCcEEeeeeeEEEEeccCCCCCCCcceeeEEEEEeeCCCccceeEEEEeecc
Confidence            44455678776544333321       2688889888776544321      1366788888542      22333 455


Q ss_pred             C----HHHHHHHHHHHHHHHH
Q 035610          110 T----EKEKGERINSIGRAIV  126 (144)
Q Consensus       110 s----~~e~~~Wi~al~~ai~  126 (144)
                      +    ......||.|+++|+.
T Consensus       107 d~~~~kk~s~aWlaAm~KA~K  127 (141)
T 2rrf_A          107 DVTVGRRQAVAWLVAMHKAAK  127 (141)
T ss_dssp             SSSCCHHHHHHHHHHHHHHHH
T ss_pred             ccCcchhhhHHHHHHHHHHHH
Confidence            5    7788899999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	144
d1faoa_	100	b.55.1.1 (A:) Dual adaptor of phosphotyrosine and	2e-11
d1eaza_	103	b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId:	4e-11
d1plsa_	113	b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [Ta	4e-11
d1fgya_	127	b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 1	4e-09
d2i5fa1	104	b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapie	3e-08
d2j59m1	133	b.55.1.1 (M:931-1063) Rho GTPase-activating protei	5e-08
d2coca1	99	b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain cont	1e-07
d1u5ea1	209	b.55.1.1 (A:14-222) Src-associated adaptor protein	3e-07
d1wi1a_	126	b.55.1.1 (A:) Calcium-dependent activator protein	3e-07
d1v89a_	118	b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KI	4e-07
d1btka_	169	b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Hom	4e-07
d1x1ga1	116	b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapie	4e-07
d1upqa_	107	b.55.1.1 (A:) Phosphoinositol 3-phosphate binding	4e-07
d1unqa_	118	b.55.1.1 (A:) Rac-alpha serine/threonine kinase {H	1e-06
d1w1ha_	147	b.55.1.1 (A:) 3-phosphoinositide dependent protein	2e-06
d1v5ua_	117	b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (M	3e-06
d1v88a_	130	b.55.1.1 (A:) Oxysterol binding protein-related pr	7e-06
d1droa_	122	b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila	7e-06
d1u5da1	106	b.55.1.1 (A:108-213) Src kinase-associated phospho	4e-05
d2coda1	102	b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo	8e-05
d1btna_	106	b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus),	1e-04
d1u5fa1	111	b.55.1.1 (A:109-219) Src-associated adaptor protei	2e-04
d1qqga1	103	b.55.1.2 (A:12-114) Insulin receptor substrate 1,	2e-04
d1wgqa_	109	b.55.1.1 (A:) FYVE, RhoGEF and PH domain containin	2e-04
d1v5pa_	126	b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId:	4e-04
d2elba2	101	b.55.1.1 (A:274-374) DCC-interacting protein 13-al	4e-04
d2coaa1	112	b.55.1.1 (A:8-119) Protein kinase c, d2 type {Huma	4e-04
d1wg7a_	150	b.55.1.1 (A:) Dedicator of cytokinesis protein 9,	8e-04
d2cofa1	95	b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens)	9e-04
d1omwa2	119	b.55.1.1 (A:550-668) G-protein coupled receptor ki	0.003

>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.1 bits (132), Expect = 2e-11
 Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 5/97 (5%)

Query: 31  GPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLN 90
           G   KQG  +KTW  RWF L + E  +FKD  +      P   + +  C  V+       
Sbjct: 8   GYLTKQGGLVKTWKTRWFTLHRNELKYFKDQMSP----EPIRILDLTECSAVQFDYSQ-E 62

Query: 91  KPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQ 127
           +   F       T Y  A T  E  E I  +   + Q
Sbjct: 63  RVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKLSQ 99

>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Tapp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (129), Expect = 4e-11
 Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 6/100 (6%)

Query: 31  GPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE--DV 88
           G   KQG  +K W RR+F L +    +FK          P   IP+     V+  +  D+
Sbjct: 7   GYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEK----EPLRVIPLKEVHKVQECKQSDI 62

Query: 89  LNKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQH 128
           + +   FE      T Y  AD+ +E    I ++  AIV  
Sbjct: 63  MMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQ 102

>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Length = 113

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 4e-11
 Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 5/96 (5%)

Query: 31  GPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLN 90
           G   K+G    TW   W +L +    ++K   +     +P+G IP+         +D   
Sbjct: 9   GYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSDN----SPKGMIPLKGSTLTSPCQDFGK 64

Query: 91  KPFAFEHSRGGYTMYSV-ADTEKEKGERINSIGRAI 125
           + F F+ +      +   A   +E+   +  I +AI
Sbjct: 65  RMFVFKITTTKQQDHFFQAAFLEERDAWVRDINKAI 100

>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 127

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Grp1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.5 bits (117), Expect = 4e-09
 Identities = 29/121 (23%), Positives = 43/121 (35%), Gaps = 28/121 (23%)

Query: 31  GPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLN 90
           G   K G  +KTW RRWFIL     ++F+ + +      PRG IP+      +  +    
Sbjct: 9   GWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTD----KEPRGIIPLENLSIREVLDP--R 62

Query: 91  KPFAFE----------------------HSRGGYTMYSVADTEKEKGERINSIGRAIVQH 128
           KP  FE                                 A + +EK E + SI  +I + 
Sbjct: 63  KPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRD 122

Query: 129 S 129
            
Sbjct: 123 P 123

>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 3e-08
 Identities = 23/100 (23%), Positives = 35/100 (35%), Gaps = 7/100 (7%)

Query: 31  GPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLN 90
           G   KQG   K W  R FIL++   +             P G I +  C+      +   
Sbjct: 6   GCLLKQGHRRKNWKVRKFILREDPAYLHYYDPA--GAEDPLGAIHLRGCVVTSVESNSNG 63

Query: 91  KPFAFEH-----SRGGYTMYSVADTEKEKGERINSIGRAI 125
           +    E+     +      +  A T KE+ E I +I  A 
Sbjct: 64  RKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMAS 103

>d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]} Length = 133

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho GTPase-activating protein 21
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (109), Expect = 5e-08
 Identities = 15/101 (14%), Positives = 33/101 (32%), Gaps = 1/101 (0%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
           + G  I+ W + + +L+    + +KD    T  S     I V  C  +  +     +   
Sbjct: 19  RVGGSIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNAC-LIDISYSETKRKNV 77

Query: 95  FEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTES 135
           F  +         A+   +    I +I  +   +      +
Sbjct: 78  FRLTTSDCECLFQAEDRDDMLAWIKTIQESSNLNEEDTGVT 118

>d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]} Length = 99

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: FYVE, RhoGEF and PH domain containing protein 3, FGD3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (104), Expect = 1e-07
 Identities = 13/84 (15%), Positives = 29/84 (34%)

Query: 41  KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG 100
           +TW   W  +   +            G  PR        L+V   E+ L+    ++    
Sbjct: 14  ETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWA 73

Query: 101 GYTMYSVADTEKEKGERINSIGRA 124
             + Y  A + + + + + ++  A
Sbjct: 74  KQSWYLSASSAELQQQWLETLSTA 97

>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 209

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src-associated adaptor protein Skap2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.3 bits (106), Expect = 3e-07
 Identities = 11/94 (11%), Positives = 25/94 (26%), Gaps = 7/94 (7%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVL--NKP 92
                   W +RW  L +   +++    +       +G   +                K 
Sbjct: 116 DHSFLGFEWQKRWCALSKTVFYYYGSDKD----KQQKGEFAIDGYDVRMNNTLRKDGKKD 171

Query: 93  FAFE-HSRGGYTMYSVADTEKEKGERINSIGRAI 125
             FE  +         A + K+  E +  +   +
Sbjct: 172 CCFEICAPDKRIYQFTAASPKDAEEWVQQLKFIL 205

>d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]} Length = 126

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Calcium-dependent activator protein for secretion, CAPS
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (103), Expect = 3e-07
 Identities = 18/101 (17%), Positives = 39/101 (38%), Gaps = 3/101 (2%)

Query: 35  KQGDYI-KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE--DVLNK 91
             G  + K W +R+F+L Q   + F       + + P+  + +             +   
Sbjct: 16  AIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGG 75

Query: 92  PFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSV 132
              F   + G T+   +D E+++   + ++ RA  Q  + V
Sbjct: 76  RAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPV 116

>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho-GTPase-activating protein 25 (KIAA0053)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 4e-07
 Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 13/104 (12%)

Query: 31  GPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE-DVL 89
           G   KQ   +K W +R+F+L+  + +++KD  +      P+G + +  C   + A     
Sbjct: 12  GWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEEDT----KPQGCMYLPGCTIKEIATNPEE 67

Query: 90  NKPFAFE--------HSRGGYTMYSVADTEKEKGERINSIGRAI 125
              F FE        +  G  +   +A ++ E  E +  + R  
Sbjct: 68  AGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVA 111

>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 169

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (105), Expect = 4e-07
 Identities = 16/121 (13%), Positives = 37/121 (30%), Gaps = 25/121 (20%)

Query: 34  NKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKC--------- 84
            K+      + +  F+L   +  +++      R  + +G I V     V+          
Sbjct: 15  QKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPP 74

Query: 85  ----------------AEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQH 128
                              +   P+ F+       +Y  + TE+ +   I+ +   I  +
Sbjct: 75  ERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIRYN 134

Query: 129 S 129
           S
Sbjct: 135 S 135

>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 116

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 4e-07
 Identities = 19/102 (18%), Positives = 35/102 (34%), Gaps = 9/102 (8%)

Query: 31  GPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLN 90
           G   KQG   K W  R F+L++   F      +    + P G   +   L     ++ + 
Sbjct: 15  GYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEE-NRPVGGFSLRGSLVSALEDNGVP 73

Query: 91  --------KPFAFEHSRGGYTMYSVADTEKEKGERINSIGRA 124
                          ++     Y  A ++ E+ E I +I + 
Sbjct: 74  TGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKL 115

>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phosphoinositol 3-phosphate binding protein-1, PEPP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (101), Expect = 4e-07
 Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 6/93 (6%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKC-AEDVLNKPF 93
           +    ++ W RRWF+L     F++KDS       +  G + + +             + F
Sbjct: 18  QDSSGLRLWKRRWFVLSGHCLFYYKDSRE----ESVLGSVLLPSYNIRPDGPGAPRGRRF 73

Query: 94  AFE-HSRGGYTMYSVADTEKEKGERINSIGRAI 125
            F     G  T    ADT ++    + ++GRA 
Sbjct: 74  TFTAEHPGMRTYVLAADTLEDLRGWLRALGRAS 106

>d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rac-alpha serine/threonine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (100), Expect = 1e-06
 Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 3/104 (2%)

Query: 31  GPANKQGDYIKTWLRRWFILKQGEHFWFK--DSHNITRGSTPRGFIPVGTCLTVKCAEDV 88
           G  +K+G+YIKTW  R+F+LK    F        ++ +   P     V  C  +K     
Sbjct: 11  GWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPR 70

Query: 89  LNKPFAFEHSRGGYTMYS-VADTEKEKGERINSIGRAIVQHSRS 131
            N               +   +T +E+ E   +I        + 
Sbjct: 71  PNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKKQ 114

>d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 147

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: 3-phosphoinositide dependent protein kinase-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 2e-06
 Identities = 22/108 (20%), Positives = 36/108 (33%), Gaps = 12/108 (11%)

Query: 30  IGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVL 89
           +GP +K+        RR  +L +G H ++ D  N       +G IP    L  +      
Sbjct: 51  MGPVDKRKG--LFARRRQLLLTEGPHLYYVDPVN----KVLKGEIPWSQELRPEA----- 99

Query: 90  NKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESEV 137
            K F           Y + D      +    I     Q  +S  ++ V
Sbjct: 100 -KNFKTFFVHTPNRTYYLMDPSGNAHKWCRKIQEVWRQRYQSHPDAAV 146

>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 117

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: SET binding factor 1, Sbf1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.5 bits (96), Expect = 3e-06
 Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 8/101 (7%)

Query: 31  GPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLN 90
           G   K+G ++K W  RWF+L + +H      H     +  +G I +     V      + 
Sbjct: 12  GILYKKGAFMKPWKARWFVLDKTKHQLRYYDHR--MDTECKGVIDLAEVEAVAPGTPTIG 69

Query: 91  KP------FAFEHSRGGYTMYSVADTEKEKGERINSIGRAI 125
            P        F+           A       + ++ I   +
Sbjct: 70  APKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSCL 110

>d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (94), Expect = 7e-06
 Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 7/103 (6%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
           K    +K+W + W +LK G    +K   N        G + +  C  ++         F 
Sbjct: 15  KIRGTLKSWTKLWCVLKPGVLLIYKTQKN----GQWVGTVLLNACEIIERPSK--KDGFC 68

Query: 95  FE-HSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESE 136
           F+       ++++V   + E    I     +     R+ +ES+
Sbjct: 69  FKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESD 111

>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 122

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 40.6 bits (94), Expect = 7e-06
 Identities = 10/89 (11%), Positives = 23/89 (25%), Gaps = 4/89 (4%)

Query: 41  KTWLRRWFILKQGEHFWFKDSHNITRGST----PRGFIPVGTCLTVKCAEDVLNKPFAFE 96
           ++W + +   K G   ++KD                   +        ++    K     
Sbjct: 30  RSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDYTKKKHVLRV 89

Query: 97  HSRGGYTMYSVADTEKEKGERINSIGRAI 125
               G      A  + E  + + S+    
Sbjct: 90  KLANGALFLLQAHDDTEMSQWVTSLKAQS 118

>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src kinase-associated phosphoprotein SKAP55 (SCAP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 4e-05
 Identities = 11/94 (11%), Positives = 30/94 (31%), Gaps = 7/94 (7%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
               +   W +RW ++ +G  +++ +  +      P+G   +             +    
Sbjct: 13  DHSFFGSEWQKRWCVVSRGLFYYYANEKS----KQPKGTFLIKGYSVRMAPHLRRDSKKE 68

Query: 95  FEH---SRGGYTMYSVADTEKEKGERINSIGRAI 125
                 S+   T    A +  E  + ++ I   +
Sbjct: 69  SCFELTSQDRRTYEFTATSPAEARDWVDQISFLL 102

>d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Centaurin-delta 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (85), Expect = 8e-05
 Identities = 15/97 (15%), Positives = 33/97 (34%), Gaps = 9/97 (9%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
                 + + +RW         ++ +   +      +G IP+    TV+           
Sbjct: 10  LSPQGKRMFQKRWVKFDGLSISYYNNEKEM----YSKGIIPLSAISTVRV-----QGDNK 60

Query: 95  FEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRS 131
           FE      T     + E+E+ + I+ +  A+   S +
Sbjct: 61  FEVVTTQRTFVFRVEKEEERNDWISILLNALKSQSLT 97

>d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]} Length = 106

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Mouse (Mus musculus), brain [TaxId: 10090]

 Score = 36.6 bits (83), Expect = 1e-04
 Identities = 12/86 (13%), Positives = 28/86 (32%), Gaps = 2/86 (2%)

Query: 41  KTWLRRWFILKQGEHFWFKDSHNITRGST--PRGFIPVGTCLTVKCAEDVLNKPFAFEHS 98
           ++W   + ++   E  ++KD+ +   G        + +   +     +    K       
Sbjct: 21  RSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRL 80

Query: 99  RGGYTMYSVADTEKEKGERINSIGRA 124
             G      A  ++E    I +I  A
Sbjct: 81  SDGNEYLFQAKDDEEMNTWIQAISSA 106

>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 111

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src-associated adaptor protein Skap2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.5 bits (83), Expect = 2e-04
 Identities = 8/94 (8%), Positives = 23/94 (24%), Gaps = 7/94 (7%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
                   W +RW  L +   +++    +       +G   +             +    
Sbjct: 21  DHSFLGFEWQKRWCALSKTVFYYYGSDKD----KQQKGEFAIDGYDVRMNNTLRKDGKKD 76

Query: 95  FEH---SRGGYTMYSVADTEKEKGERINSIGRAI 125
                 +         A + K+  E +  +   +
Sbjct: 77  CCFEICAPDKRIYQFTAASPKDAEEWVQQLKFIL 110

>d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Phosphotyrosine-binding domain (PTB)
domain: Insulin receptor substrate 1, IRS-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (83), Expect = 2e-04
 Identities = 14/89 (15%), Positives = 28/89 (31%), Gaps = 9/89 (10%)

Query: 41  KTWLRRWFILKQGEHFWFKD--------SHNITRGSTPRGFIPVGTCLTVKCAEDVLNKP 92
           K+  +R+F+L+                      + S P+  IP+ +C  +    D     
Sbjct: 12  KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRADS-KNK 70

Query: 93  FAFEHSRGGYTMYSVADTEKEKGERINSI 121
                          AD+E E+     ++
Sbjct: 71  HLVALYTRDEHFAIAADSEAEQDSWYQAL 99

>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]} Length = 109

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.2 bits (82), Expect = 2e-04
 Identities = 14/101 (13%), Positives = 26/101 (25%), Gaps = 4/101 (3%)

Query: 31  GPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLN 90
           G   +     K W   WF++K    + +  S +           P+         ++   
Sbjct: 12  GYLYRSKGSKKPWKHLWFVIKNKVLYTYAASED----VAALESQPLLGFTVTLVKDENSE 67

Query: 91  KPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRS 131
                   +G       AD        I++     V    S
Sbjct: 68  SKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEGTVSGPSS 108

>d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 126

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Tapp2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.8 bits (81), Expect = 4e-04
 Identities = 18/102 (17%), Positives = 39/102 (38%), Gaps = 5/102 (4%)

Query: 35  KQGDYIKTWLRRWFILKQGE---HFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE--DVL 89
           +  +    +LRR+FIL        ++  +  N+  G+   G + +     V  A      
Sbjct: 24  EDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKP 83

Query: 90  NKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRS 131
             PF F  +      +  A+ +K+  + + ++ +A      S
Sbjct: 84  KTPFCFVINALSQRYFLQANDQKDLKDWVEALNQASKSGPSS 125

>d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: DCC-interacting protein 13-alpha, APPL1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (80), Expect = 4e-04
 Identities = 15/91 (16%), Positives = 29/91 (31%), Gaps = 5/91 (5%)

Query: 34  NKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPF 93
           NK G    TW R+++  + G                    + +  C  +    +     F
Sbjct: 15  NKTGLVSSTWDRQFYFTQGGNLMSQARGD-----VAGGLAMDIDNCSVMAVDCEDRRYCF 69

Query: 94  AFEHSRGGYTMYSVADTEKEKGERINSIGRA 124
                 G  +    A+++K+  E I +I   
Sbjct: 70  QITSFDGKKSSILQAESKKDHEEWICTINNI 100

>d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]} Length = 112

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Protein kinase c, d2 type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (81), Expect = 4e-04
 Identities = 12/97 (12%), Positives = 24/97 (24%), Gaps = 8/97 (8%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE----DVLN 90
              +      R ++ L       F++       +     IP+   LTV+ A+        
Sbjct: 9   HYSNKDTLRKRHYWRLDCKCITLFQN----NTTNRYYKEIPLSEILTVESAQNFSLVPPG 64

Query: 91  KPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQ 127
                         Y V +         +  G    +
Sbjct: 65  TNPHCFEIVTANATYFVGEMPGGTPGGPSGQGAEAAR 101

>d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dedicator of cytokinesis protein 9, DOCK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (80), Expect = 8e-04
 Identities = 18/108 (16%), Positives = 41/108 (37%), Gaps = 3/108 (2%)

Query: 31  GPANKQGDYIKTWLRRWFILKQGEHFWFKDS--HNITRGSTPRGFIPVGTCLTVKCAEDV 88
              +     ++++ RR+F L Q     +  +   +      P+G I + +C+ V     V
Sbjct: 28  NMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSCMGVVQNNKV 87

Query: 89  LNKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESE 136
               F     +   +    AD+E E  E I  + + +  +  +  + +
Sbjct: 88  RRFAF-ELKMQDKSSYLLAADSEVEMEEWITILNKILQLNFEAAMQEK 134

>d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: KIAA1914
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (78), Expect = 9e-04
 Identities = 10/85 (11%), Positives = 22/85 (25%), Gaps = 4/85 (4%)

Query: 41  KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG 100
             W  RW  ++     +++D +     S             V       +        +G
Sbjct: 13  SQWKSRWCSVRDNHLHFYQDRNR----SKVAQQPLSLVGCEVVPDPSPDHLYSFRILHKG 68

Query: 101 GYTMYSVADTEKEKGERINSIGRAI 125
                  A + +E G  +  +    
Sbjct: 69  EELAKLEAKSSEEMGHWLGLLLSES 93

>d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]} Length = 119

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 33.5 bits (75), Expect = 0.003
 Identities = 14/100 (14%), Positives = 26/100 (26%), Gaps = 7/100 (7%)

Query: 35  KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFA 94
               ++  W RR+F L      W  +        T                  +  +   
Sbjct: 19  MGNPFLTQWQRRYFYLFPNRLEWRGEGEAPQSLLTMEEI-------QSVEETQIKERKCL 71

Query: 95  FEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTE 134
               RGG       D++ E  +    +  A  +  + V  
Sbjct: 72  LLKIRGGKQFVLQCDSDPELVQWKKELRDAYREAQQLVQR 111

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	144
d1faoa_	100	Dual adaptor of phosphotyrosine and 3-phosphoinosi	99.93
d2coaa1	112	Protein kinase c, d2 type {Human (Homo sapiens) [T	99.91
d2fjla1	101	Phosphoinositide phospholipase C, PLC-gamma-1 {Rat	99.89
d1fgya_	127	Grp1 {Mouse (Mus musculus) [TaxId: 10090]}	99.89
d1eaza_	103	Tapp1 {Human (Homo sapiens) [TaxId: 9606]}	99.89
d1wgqa_	109	FYVE, RhoGEF and PH domain containing protein 6, F	99.89
d1v89a_	118	Rho-GTPase-activating protein 25 (KIAA0053) {Human	99.88
d2coda1	102	Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 96	99.88
d1x1fa1	136	Signal-transducing adaptor protein 1, STAP-1 {Huma	99.88
d1plsa_	113	Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}	99.88
d1v88a_	130	Oxysterol binding protein-related protein 8 (ORP-8	99.87
d2dyna_	111	Dynamin {Human (Homo sapiens) [TaxId: 9606]}	99.87
d1v5ua_	117	SET binding factor 1, Sbf1 {Mouse (Mus musculus) [	99.87
d2coca1	99	FYVE, RhoGEF and PH domain containing protein 3, F	99.86
d2j59m1	133	Rho GTPase-activating protein 21 {Human (Homo sapi	99.85
d1btka_	169	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	99.85
d1u5da1	106	Src kinase-associated phosphoprotein SKAP55 (SCAP1	99.84
d1upqa_	107	Phosphoinositol 3-phosphate binding protein-1, PEP	99.84
d1u5fa1	111	Src-associated adaptor protein Skap2 {Mouse (Mus m	99.84
d1v5ma_	136	SH2 and PH domain-containing adapter protein APS {	99.83
d1wi1a_	126	Calcium-dependent activator protein for secretion,	99.83
d1qqga1	103	Insulin receptor substrate 1, IRS-1 {Human (Homo s	99.83
d1wg7a_	150	Dedicator of cytokinesis protein 9, DOCK9 {Human (	99.83
d1w1ha_	147	3-phosphoinositide dependent protein kinase-1 {Hum	99.82
d1omwa2	119	G-protein coupled receptor kinase 2 (beta-adrenerg	99.82
d1v5pa_	126	Tapp2 {Mouse (Mus musculus) [TaxId: 10090]}	99.82
d2i5fa1	104	Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}	99.82
d1u5ea1	209	Src-associated adaptor protein Skap2 {Mouse (Mus m	99.81
d2elba2	101	DCC-interacting protein 13-alpha, APPL1 {Human (Ho	99.81
d1unqa_	118	Rac-alpha serine/threonine kinase {Human (Homo sap	99.81
d2cofa1	95	KIAA1914 {Human (Homo sapiens) [TaxId: 9606]}	99.79
d1x1ga1	116	Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]}	99.78
d1wjma_	123	beta-spectrin {Human (Homo sapiens), brain 2 isofo	99.74
d1btna_	106	beta-spectrin {Mouse (Mus musculus), brain [TaxId:	99.74
d1droa_	122	beta-spectrin {Fruit fly (Drosophila melanogaster)	99.7
d1v61a_	132	Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [	99.52
d1zc3b1	109	Exocyst complex protein EXO84 {Rat (Rattus norvegi	99.23
d2dfka2	162	Rho guanine nucleotide exchange factor 9, Collybis	99.21
d1maia_	119	Phospholipase C delta-1 {Rat (Rattus norvegicus) [	98.95
d1dbha2	133	Son of sevenless-1 (sos-1) {Human (Homo sapiens) [	98.93
d1ki1b2	142	GEF of intersectin {Human (Homo sapiens) [TaxId: 9	98.74
d1xcga2	140	Rho guanine nucleotide exchange factor 11, PDZ-Rho	98.6
d1ntya2	121	Triple functional domain protein TRIO {Human (Homo	98.6
d1txda2	114	Rho guanine nucleotide exchange factor 12 {Human (	98.52
d1kz7a2	147	Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId	98.33
d1fhoa_	119	UNC-89 {Nematode (Caenorhabditis elegans) [TaxId:	98.0
d2adza1	105	Alpha-1-syntrophin {Mouse (Mus musculus) [TaxId: 1	97.86
d2zkmx3	131	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	96.89
d1foea2	162	GEF of TIAM1 (T-Lymphoma invasion and metastasis i	88.64

>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.3e-25  Score=141.01  Aligned_cols=96  Identities=28%  Similarity=0.386  Sum_probs=86.6

Q ss_pred             CceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEE
Q 035610           27 PGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYS  106 (144)
Q Consensus        27 ~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l  106 (144)
                      +.|+|||.|+|+..+.|++|||||.++.|.||+++.    +..+.+.|+|.+|..+..... .+++++|.|.+++++|+|
T Consensus         4 ~~KeG~L~K~~~~~k~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~~v~~~~~-~~~~~~F~i~~~~r~~~l   78 (100)
T d1faoa_           4 GTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQM----SPEPIRILDLTECSAVQFDYS-QERVNCFCLVFPFRTFYL   78 (100)
T ss_dssp             TCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTT----CSSCSEEEEGGGCCEEEEECS-SSSSSEEEEEETTEEEEE
T ss_pred             ccEEEEEEEeCCCCCCceEEEEEEECCEEEEEeccC----CccCceEEechheEEEEeccc-cccccccccccCCeEEEE
Confidence            568999999998889999999999999999999987    778999999999877655444 367899999999999999


Q ss_pred             EcCCHHHHHHHHHHHHHHHHh
Q 035610          107 VADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       107 ~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      +|+|.+++++||.+|+.+|.+
T Consensus        79 ~a~s~~~~~~Wi~ai~~~i~~   99 (100)
T d1faoa_          79 CAKTGVEADEWIKILRWKLSQ   99 (100)
T ss_dssp             ECSSHHHHHHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHHHHhh
Confidence            999999999999999999864

>d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Protein kinase c, d2 type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.9e-24  Score=138.03  Aligned_cols=94  Identities=17%  Similarity=0.126  Sum_probs=83.1

Q ss_pred             ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-----cCCCCceEEEEeCCe
Q 035610           28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-----VLNKPFAFEHSRGGY  102 (144)
Q Consensus        28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-----~~~~~~~f~I~~~~~  102 (144)
                      +++|||.|+++..+.|++|||||+++.|.||+++.    +..+.|.|+|..+..+....+     ....+++|+|.++++
T Consensus         2 lk~GwL~k~~~~~~~wkkRwFvL~~~~L~YYk~~~----~~~p~g~I~L~~~~~v~~~~~~~~~~~~~~~~~F~I~T~~r   77 (112)
T d2coaa1           2 LREGWVVHYSNKDTLRKRHYWRLDCKCITLFQNNT----TNRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVTANA   77 (112)
T ss_dssp             SEEEEEEECCSSSCCCEEEEEEECSSEEEEESSSS----CSSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEECSSC
T ss_pred             ceEEEEEEECCCCCCeeEEEEEEEcceEEEEeccC----CCccceEEeeeccccccccccccccccCCCccEEEEEeCCe
Confidence            68999999999889999999999999999999998    788999999999888766543     135679999999999


Q ss_pred             EEEEEc-----------CCHHHHHHHHHHHHHHH
Q 035610          103 TMYSVA-----------DTEKEKGERINSIGRAI  125 (144)
Q Consensus       103 ~~~l~a-----------~s~~e~~~Wi~al~~ai  125 (144)
                      +||+.+           ++.+++++|+++|++|+
T Consensus        78 tyy~~~~~~~~~~~~s~~~~~~~~~W~~aI~~A~  111 (112)
T d2coaa1          78 TYFVGEMPGGTPGGPSGQGAEAARGWETAIRQAL  111 (112)
T ss_dssp             CCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHG
T ss_pred             EEEEecCCccccccccccChHHHHHHHHHHHHhh
Confidence            999865           77889999999999975

>d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phosphoinositide phospholipase C, PLC-gamma-1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=1.3e-22  Score=128.18  Aligned_cols=95  Identities=18%  Similarity=0.309  Sum_probs=83.9

Q ss_pred             ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC---CeEE
Q 035610           28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG---GYTM  104 (144)
Q Consensus        28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~---~~~~  104 (144)
                      +++|||++++...+.|++|||+|.++.|.||+++.    +..+.+.++|.++..+...++..+++++|.|.++   .++|
T Consensus         2 iK~G~L~k~~~~~k~W~kR~fvL~~~~L~yy~~~~----~~~~~~~i~l~~~~v~~~~~~~~~~~~~f~i~~~~~~~~~~   77 (101)
T d2fjla1           2 IKNGILYLEDPVNHEWYPHYFVLTSSKIYYSEETS----SDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSL   77 (101)
T ss_dssp             CEEEEEEEEETTTTEEEEEEEEEETTEEEECCCCS----CTCCCEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCE
T ss_pred             ceEEEEEEEcCCCCCCeEEEEEEECCEEEEEeccc----cceecceEEcCCceeEeeeeecccccceeEEeccccccEEE
Confidence            58999999998889999999999999999999887    7889999999997766555555578899999965   3679


Q ss_pred             EEEcCCHHHHHHHHHHHHHHHH
Q 035610          105 YSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus       105 ~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      +|+|+|.+|+.+||.+|++|+.
T Consensus        78 ~~~a~s~~e~~~Wi~ai~~~~~   99 (101)
T d2fjla1          78 DVAADSQEELQDWVKKIREVAQ   99 (101)
T ss_dssp             EEEESSHHHHHHHHHHHHHHHT
T ss_pred             EEEeCCHHHHHHHHHHHHHHHh
Confidence            9999999999999999999873

>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Grp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=4.1e-22  Score=130.05  Aligned_cols=100  Identities=30%  Similarity=0.481  Sum_probs=82.8

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEE-----
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHS-----   98 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~-----   98 (144)
                      +.+|.++|||.|+++..+.|++|||||.++.|.||+++.    +..+.+.|+|.++..+...+.  .++++|.+.     
T Consensus         2 ~~np~keG~L~K~~~~~k~WkrR~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~--~~~~~~~~~~~~~~   75 (127)
T d1fgya_           2 FFNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTT----DKEPRGIIPLENLSIREVLDP--RKPNCFELYNPSHK   75 (127)
T ss_dssp             CSSCSEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTT----CSSCSEEEECTTCEEEEECCS--SCSSEEEEECSSST
T ss_pred             CCCCceEEEEEEECCCCCCcEEEEEEEECCEEEEEccCC----CccccceEeCCCeEEEEccCC--CCCceEEEeccccc
Confidence            356899999999998889999999999999999999887    788999999999765543332  345556543     


Q ss_pred             -----------------eCCeEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610           99 -----------------RGGYTMYSVADTEKEKGERINSIGRAIVQHS  129 (144)
Q Consensus        99 -----------------~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~~  129 (144)
                                       +..+.++|+|+|.+|+.+||.+|+.+|.+.+
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~f~a~s~~e~~~Wi~aL~~~i~~~~  123 (127)
T d1fgya_          76 GQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDP  123 (127)
T ss_dssp             TCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHHCT
T ss_pred             cccccccccccceeEeeCCCeEEEEECCCHHHHHHHHHHHHHHHccCC
Confidence                             3457889999999999999999999997653

>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Tapp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.7e-22  Score=126.59  Aligned_cols=99  Identities=27%  Similarity=0.393  Sum_probs=87.0

Q ss_pred             CCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc--cCCCCceEEEEeCCeE
Q 035610           26 QPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED--VLNKPFAFEHSRGGYT  103 (144)
Q Consensus        26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~--~~~~~~~f~I~~~~~~  103 (144)
                      ..+++|||.|++...+.|++|||+|.++.|.||+++.    ...+.+.|+|..+..+.....  .....++|.|.++++.
T Consensus         2 ~vik~G~L~K~~~~~~~Wkkr~fvL~~~~l~yy~~~~----~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~i~~~~~~   77 (103)
T d1eaza_           2 AVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSEL----EKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSRT   77 (103)
T ss_dssp             CCSEEEEEEEECTTTCCEEEEEEEECSSEEEEESSTT----CSSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSSCE
T ss_pred             ceEEEEEEEEECCCCCCeeEEEEEEECCEEEEEeccc----CcccceEEEccceEEeeccccccccccceEEEEEeCCEE
Confidence            4579999999998889999999999999999999887    778999999999876654432  2467799999999999


Q ss_pred             EEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          104 MYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       104 ~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      |+|+|+|.+|+++|+.+|+.|+..+
T Consensus        78 ~~~~a~s~~e~~~W~~aI~~ai~~~  102 (103)
T d1eaza_          78 FYVQADSPEEMHSWIKAVSGAIVAQ  102 (103)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeCCHHHHHHHHHHHHHHHHHc
Confidence            9999999999999999999998653

>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=9.6e-22  Score=125.55  Aligned_cols=101  Identities=16%  Similarity=0.155  Sum_probs=86.4

Q ss_pred             eecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC-
Q 035610           23 FWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG-  101 (144)
Q Consensus        23 ~~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~-  101 (144)
                      ....+.++|||.|+++..+.|++|||+|.++.|+||+++.    ...+...|.|.++..+. ..+...++++|.|..++ 
T Consensus         4 ~~~~~~~~G~L~k~~~~~~~W~kr~~vL~~~~L~~~k~~~----~~~~~~~i~l~~~~~~~-~~~~~~~~~~F~i~~~~~   78 (109)
T d1wgqa_           4 GSSGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASE----DVAALESQPLLGFTVTL-VKDENSESKVFQLLHKGM   78 (109)
T ss_dssp             CCCSCSCEEEEEEESSTTSCCEEEEEEEETTEEEEESCTT----CSSCSEEEECSSEEEEE-CCCSSCSSSEEEEEETTE
T ss_pred             CCCCCcEEEEEEEECCCCCCceEEEEEEeCCEEEEecccc----ccccccccccceeeeee-cccccccceeeeeecccc
Confidence            3567889999999998889999999999999999999987    77889999999965543 34445788999999875 


Q ss_pred             eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          102 YTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       102 ~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      +.|+|+|++.+++++||.+|+.|+.+.
T Consensus        79 ~~~~f~a~s~~~~~~Wi~ai~~a~~~~  105 (109)
T d1wgqa_          79 VFYVFKADDAHSTQRWIDAFQEGTVSG  105 (109)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHHSCC
T ss_pred             eEEEEECCCHHHHHHHHHHHHHHhccC
Confidence            567899999999999999999998644

>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho-GTPase-activating protein 25 (KIAA0053)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=6.2e-22  Score=127.85  Aligned_cols=102  Identities=23%  Similarity=0.385  Sum_probs=86.6

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecc-ccCCCCceEEEEeCC-
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE-DVLNKPFAFEHSRGG-  101 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~-~~~~~~~~f~I~~~~-  101 (144)
                      ...++++|||.|++...+.|++|||+|.++.|+||+++.    +..+.+.++|..+..+.... .....+++|.|.+.. 
T Consensus         5 ~s~~~k~G~L~K~~~~~k~WkkR~fvL~~~~l~y~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~f~l~~~~~   80 (118)
T d1v89a_           5 SSGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEE----DTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASW   80 (118)
T ss_dssp             SSCEEEEEEEEEECSSSSCEEEEEEEEETTEEEEESSSS----CCSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCC
T ss_pred             CCCCeEEEEEEEECCCCCCcEEEEEEEECCEEEEecccC----cccccceeccCceEEEEeccccccCCCcEEEEecCCC
Confidence            346789999999998889999999999999999999887    78899999999976654433 345677999998643 


Q ss_pred             -------eEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610          102 -------YTMYSVADTEKEKGERINSIGRAIVQHS  129 (144)
Q Consensus       102 -------~~~~l~a~s~~e~~~Wi~al~~ai~~~~  129 (144)
                             +.|+|+|++.+|+.+||.+|++|+.+..
T Consensus        81 ~~~~~~~~~~~~~a~s~ee~~~Wi~aI~~a~~~~p  115 (118)
T d1v89a_          81 DQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGSGP  115 (118)
T ss_dssp             SSCCSSCCCEEEECSSHHHHHHHHHHHHHHHHCCS
T ss_pred             cceecCCcEEEEEcCCHHHHHHHHHHHHHHHccCC
Confidence                   6799999999999999999999986543

>d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Centaurin-delta 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=6.4e-22  Score=125.25  Aligned_cols=94  Identities=18%  Similarity=0.239  Sum_probs=82.8

Q ss_pred             ceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEE
Q 035610           28 GAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYS  106 (144)
Q Consensus        28 ~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l  106 (144)
                      +++|||.|+++ +.+.|++|||+|.++.|.||+++.    +..+.+.|+|.++..+..     .++++|.|.++++.|+|
T Consensus         2 ik~G~L~K~~~~~~~~W~kr~fvL~~~~L~~~~~~~----~~~~~~~i~L~~~~~~~~-----~~~~~f~i~~~~~~~~l   72 (102)
T d2coda1           2 VKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEK----EMYSKGIIPLSAISTVRV-----QGDNKFEVVTTQRTFVF   72 (102)
T ss_dssp             CEEEEEEECCSSSSSCCEEEEEEECSSEEEEEESSC----CSSCCCEEETTTEEEEEE-----ETTTEEEEEESSCCEEE
T ss_pred             cEEEEEEEECCCCCCCceEEEEEEECCEEEEEeccC----cceeEEEEEchhceeecc-----ccceeEEEEcCCcEEEE
Confidence            58999999975 457899999999999999999987    788999999999766543     34589999999999999


Q ss_pred             EcCCHHHHHHHHHHHHHHHHhcCC
Q 035610          107 VADTEKEKGERINSIGRAIVQHSR  130 (144)
Q Consensus       107 ~a~s~~e~~~Wi~al~~ai~~~~~  130 (144)
                      +|+|.+++.+|+.+|+.++.....
T Consensus        73 ~a~s~~e~~~Wi~ai~~~i~~~~~   96 (102)
T d2coda1          73 RVEKEEERNDWISILLNALKSQSL   96 (102)
T ss_dssp             ECSSHHHHHHHHHHHHHHHHHHST
T ss_pred             EeCCHHHHHHHHHHHHHHHHhCcC
Confidence            999999999999999999876543

>d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1, STAP-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Signal-transducing adaptor protein 1, STAP-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.3e-22  Score=133.02  Aligned_cols=97  Identities=8%  Similarity=-0.035  Sum_probs=86.4

Q ss_pred             ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEE
Q 035610           28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSV  107 (144)
Q Consensus        28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~  107 (144)
                      .++|||.|++...+.|++|||||+++.|+||+++.    +..+.+.|+|.++..+....+..+.+++|.|.++.+.|+|+
T Consensus        12 ~~eG~L~k~~~~~k~WkkrwfvL~~~~L~yY~~~~----d~~~~~~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~~~~f~   87 (136)
T d1x1fa1          12 YFEGFLLIKRSGYREYEHYWTELRGTTLFFYTDKK----SIIYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPKEEVQLK   87 (136)
T ss_dssp             EEEEEEEEECTTCCSCEEEEEEEETTEEEEESCSS----CSSCSEECCCSSCCEEEECCCTTSCCCEEEEECSSCCEEEE
T ss_pred             cEEEEEEEECCCCCCeEEEEEEEcCCEeEEEeecc----cccccccccccceeeeeeecccccccceeeecCCCceEEEE
Confidence            37899999999999999999999999999999987    77899999999987766554444667999999999999999


Q ss_pred             cCCHHHHHHHHHHHHHHHHhc
Q 035610          108 ADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       108 a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      |+|.+++++|+.+|+.++...
T Consensus        88 Aes~~e~~~Wi~~I~~v~~~~  108 (136)
T d1x1fa1          88 TENTESGEEWRGFILTVTELS  108 (136)
T ss_dssp             CSSHHHHHHHHHHHHHHHHSS
T ss_pred             eCCHHHHHHHHHHHHHHHhcc
Confidence            999999999999999988654

>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.2e-21  Score=125.79  Aligned_cols=100  Identities=20%  Similarity=0.331  Sum_probs=88.0

Q ss_pred             CCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC-CeEE
Q 035610           26 QPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG-GYTM  104 (144)
Q Consensus        26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~-~~~~  104 (144)
                      ..+++|||.|++...+.|++|||+|.++.|+||+++.    +..+.+.|+|.++..+....+...+.++|.|.++ ++.|
T Consensus         4 ~~ikeG~L~k~~~~~k~WkkryfvL~~~~L~~y~~~~----~~~p~~~i~l~~~~~~~~~~~~~~~~~~f~l~~~~~~~~   79 (113)
T d1plsa_           4 KRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKS----DNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDH   79 (113)
T ss_dssp             CCSEEEEEEEESSSSSCCEEEEEEEETTEEEEESSTT----CSSCSEEEESSSCCEESSCCSSCCSSSEEEEEETTTEEE
T ss_pred             CceEEEEEEEeCCCCCCceEEEEEEECCEEEEEecCC----ccccceEEECccCeEEeeecccCCcceEEEEecCCCeEE
Confidence            4679999999998889999999999999999999887    7889999999998777665555577789998875 6789


Q ss_pred             EEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610          105 YSVADTEKEKGERINSIGRAIVQHS  129 (144)
Q Consensus       105 ~l~a~s~~e~~~Wi~al~~ai~~~~  129 (144)
                      +|+|+|.+|+++|+.+|+.|+....
T Consensus        80 ~~~a~s~~e~~~Wi~ai~~ai~~~~  104 (113)
T d1plsa_          80 FFQAAFLEERDAWVRDINKAIKCIE  104 (113)
T ss_dssp             EEECSSHHHHHHHHHHHHHHHHHHT
T ss_pred             EEECCCHHHHHHHHHHHHHHHHhCc
Confidence            9999999999999999999987653

>d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=9.6e-22  Score=129.05  Aligned_cols=97  Identities=16%  Similarity=0.239  Sum_probs=78.7

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC--
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG--  101 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~--  101 (144)
                      ...+.++|||.|++ ..+.|++|||||+++.|+||+++.    +..+.+.|+|.++..+....  ...+++|+|..+.  
T Consensus         5 ~~~~~~~GwLkk~~-~~k~WkkRwfvL~~~~L~yyk~~~----~~~~~g~i~L~~~~v~~~~~--~~~~~~f~i~~~~~~   77 (130)
T d1v88a_           5 SSGIVMADWLKIRG-TLKSWTKLWCVLKPGVLLIYKTQK----NGQWVGTVLLNACEIIERPS--KKDGFCFKLFHPLEQ   77 (130)
T ss_dssp             SSSCCEEEEEEECC-SSSSCEEEEEEEETTEEEEESCSS----SCCCCEEEECSSCEECCCCT--TTSSCEEEEECTTCC
T ss_pred             CCCCeEeCeEEeCC-CCCCceEEEEEEeCCEEEEEcCCC----CCcceeEEECCCeEEEEccc--cCCCceEEEEcCCCc
Confidence            45788999996655 578999999999999999999987    78899999999966543322  3567889886432  


Q ss_pred             ----------------------eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610          102 ----------------------YTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       102 ----------------------~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                                            +.++|+|+|++|+++||++|+.++..
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~A~s~~e~~~Wi~al~~~i~~  125 (130)
T d1v88a_          78 SIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKS  125 (130)
T ss_dssp             CCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHTT
T ss_pred             ceecccCcccccceeEEecCCcEEEEEECCCHHHHHHHHHHHHHHhhc
Confidence                                  23678999999999999999999854

>d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dynamin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=5.9e-22  Score=127.32  Aligned_cols=96  Identities=16%  Similarity=0.126  Sum_probs=79.9

Q ss_pred             CceEEEEEeeCCC--CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC---
Q 035610           27 PGAIGPANKQGDY--IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG---  101 (144)
Q Consensus        27 ~~~~G~L~k~~~~--~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~---  101 (144)
                      ..++|||.|++..  .+.|++|||+|.++.|+||+++.    +..+.+.|+|.++.......+..+++++|.|.++.   
T Consensus         3 vik~GwL~k~~~~~~~~~WkkRwFvL~~~~L~yyk~~~----~~~~~~~i~l~~~~v~~~~~~~~~~~~~F~l~~~~~~~   78 (111)
T d2dyna_           3 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDE----EKEKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRN   78 (111)
T ss_dssp             EEEEEEEEETTCCTTTTSSEEEEEEEESSEEEEESSTT----CCCEEEEEECTTEEEEEECCCSTTCSEEEEEEESSCSC
T ss_pred             EEEEeeEEEECCCCCcCCceEEEEEEECCEEEEEcchh----hcccccccccccceeEeeccccccccccEEeeeccccc
Confidence            3589999999643  46799999999999999999987    78899999999964443334445788999998643   


Q ss_pred             -----eEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610          102 -----YTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus       102 -----~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                           ++|+|+|+|.+|+.+|+++|.+|..
T Consensus        79 ~~~~~r~~~l~a~s~ed~~~W~~al~~A~~  108 (111)
T d2dyna_          79 VYKDYRQLELACETQEEVDSWKASFLRAGV  108 (111)
T ss_dssp             SBTTBSSEEEEESSHHHHHHHHHHHHHTTC
T ss_pred             cccCceeEEEECCCHHHHHHHHHHHHHhcc
Confidence                 6899999999999999999999763

>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: SET binding factor 1, Sbf1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=1.6e-21  Score=125.64  Aligned_cols=101  Identities=16%  Similarity=0.269  Sum_probs=84.8

Q ss_pred             eecCCceEEEEEeeCCCCCCceeEEEEEeC--CeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc------CCCCce
Q 035610           23 FWSQPGAIGPANKQGDYIKTWLRRWFILKQ--GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV------LNKPFA   94 (144)
Q Consensus        23 ~~~~~~~~G~L~k~~~~~~~w~~R~fvL~~--~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~------~~~~~~   94 (144)
                      ....+.++|||.|++...+.|++|||+|+.  ..|+||+++.    +..+++.|+|.++..+......      ....++
T Consensus         4 ~~s~~~~eG~L~k~~~~~k~WkkR~fvL~~~~~~L~~~~~~~----~~~p~g~i~l~~~~~v~~~~~~~~~~~~~~~~~~   79 (117)
T d1v5ua_           4 GSSGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRM----DTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAF   79 (117)
T ss_dssp             SCCSSSEEEEEEECCCSSSCCEEEEEEEETTTTEEEEESSSS----CSSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTC
T ss_pred             CCCCCeEEEEEEEECCCCCCceEEEEEEeCCCCEEEeccccc----ccCcceEEEecceEEEeecccccccccccccceE
Confidence            345678999999999888999999999974  5799999987    7889999999998776544321      234478


Q ss_pred             EEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           95 FEHSRGGYTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        95 f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      |.+.++++.|+|+|+|.+++++||.+|+.|+..
T Consensus        80 ~~~~~~~~~~~~~a~s~~e~~~Wv~~l~~ai~~  112 (117)
T d1v5ua_          80 FDVKTTRRVYNFCAQDVPSAQQWVDRIQSCLSS  112 (117)
T ss_dssp             EEEEESSCEEEEECSSHHHHHHHHHHHHTTCCC
T ss_pred             EEeeCCCcEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999998743

>d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: FYVE, RhoGEF and PH domain containing protein 3, FGD3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=5.1e-21  Score=119.86  Aligned_cols=93  Identities=14%  Similarity=0.194  Sum_probs=79.3

Q ss_pred             ceEEEEEeeCCCCCCceeEEEEEeCC---eEEEEecCCCCCCCCCcceEEeCCceEEEeecc-ccCCCCceEEEEeCCeE
Q 035610           28 GAIGPANKQGDYIKTWLRRWFILKQG---EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE-DVLNKPFAFEHSRGGYT  103 (144)
Q Consensus        28 ~~~G~L~k~~~~~~~w~~R~fvL~~~---~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~-~~~~~~~~f~I~~~~~~  103 (144)
                      +++|||.++.. .+.|++|||||+++   .|+||+++.    +..+.+.|+|.++..+.... ....++++|.|.+++++
T Consensus         2 ~~~G~L~~~~~-~k~W~krwfvL~~~~~~~ly~~~~~~----~~~~~~~i~l~~~~~~~~~~~~~~~~~~~F~i~~~~r~   76 (99)
T d2coca1           2 LLCGPLRLSES-GETWSEVWAAIPMSDPQVLHLQGGSQ----DGRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWAKQS   76 (99)
T ss_dssp             SSEEEEEEESS-SSCEEEEEEECCTTCTTCEEEECCTT----CSSSCSEECGGGCEEECCCSSSCCSSSEEEEEEETTEE
T ss_pred             ceEEEEEccCC-CCCccEEEEEEecCCccEEEEECcCc----cccccccccccceeeeecccccccCCceEEEEEcCCcE
Confidence            57899999974 47899999999976   488888887    78899999999976654332 23567899999999999


Q ss_pred             EEEEcCCHHHHHHHHHHHHHHH
Q 035610          104 MYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus       104 ~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      |+|+|+|++|+++||++|++|+
T Consensus        77 ~~l~A~s~~e~~~Wi~aL~~Aa   98 (99)
T d2coca1          77 WYLSASSAELQQQWLETLSTAA   98 (99)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEEECCCHHHHHHHHHHHHHhc
Confidence            9999999999999999999986

>d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho GTPase-activating protein 21
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=6.7e-21  Score=125.80  Aligned_cols=98  Identities=17%  Similarity=0.231  Sum_probs=71.7

Q ss_pred             ceEEEEEe----------eCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEE
Q 035610           28 GAIGPANK----------QGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEH   97 (144)
Q Consensus        28 ~~~G~L~k----------~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I   97 (144)
                      .|+|||.+          .+...+.|++|||||+++.|+||+++........+.+.|+|.+|... ...+...++|+|.|
T Consensus         2 ~KeG~L~~k~~~~~~~kk~~~~~k~Wkkr~fvL~~~~L~~y~~~~~~~~~~~~~~~i~L~~~~v~-~~~~~~~r~~~F~i   80 (133)
T d2j59m1           2 AKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNACLID-ISYSETKRKNVFRL   80 (133)
T ss_dssp             CEEEEEEEEECC------------CCEEEEEEEETTEEEEESCTTCC--------CEECSSCEEE-ECSSSCSCSSEEEE
T ss_pred             CceEEEEeeccccccccccCCCCCCceEEEEEEeCCEEEEEeccccccccccccccceecceEEE-EcccccccCceeEE
Confidence            48999974          34456789999999999999999987522223457789999997553 33333578899999


Q ss_pred             EeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610           98 SRGGYTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus        98 ~~~~~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      .++++.|+|+|+|++++++||.+|+.++.
T Consensus        81 ~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~  109 (133)
T d2j59m1          81 TTSDCECLFQAEDRDDMLAWIKTIQESSN  109 (133)
T ss_dssp             ECSSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred             ecCCCEEEEEeCCHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999998763

>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1e-20  Score=129.97  Aligned_cols=104  Identities=15%  Similarity=0.141  Sum_probs=83.2

Q ss_pred             CceEEEEEeeCCC-----CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc-------------
Q 035610           27 PGAIGPANKQGDY-----IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV-------------   88 (144)
Q Consensus        27 ~~~~G~L~k~~~~-----~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~-------------   88 (144)
                      .+++|||.|++..     ..+|++|||||.++.|.||+++.+..+...+.|.|+|.++..|....+.             
T Consensus         3 vi~eG~L~Kr~~~k~k~~~~~WkrRwFVL~~~~L~Yyk~~~~~~~~~~~kG~I~L~~~~~v~~~~~~~~~~~~~~~~~~~   82 (169)
T d1btka_           3 VILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRRG   82 (169)
T ss_dssp             CCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC----
T ss_pred             EEEEEEEEEecCCCCCcCcCCceEEEEEEECCEEeeeccccccccccCccceEeccceEEEEeecccCCCCccccccccc
Confidence            5799999999753     2379999999999999999987522223457899999998776543211             


Q ss_pred             ------------CCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcCC
Q 035610           89 ------------LNKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSR  130 (144)
Q Consensus        89 ------------~~~~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~~~  130 (144)
                                  ....++|.|.+++++|+|+|+|.+|+++||++|+.+|.....
T Consensus        83 ~~~~~~~~~~~~~~~~~~F~I~t~~rt~~l~A~s~eE~~~WI~aL~~~i~~~~~  136 (169)
T d1btka_          83 EESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIRYNSD  136 (169)
T ss_dssp             -----CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHHHHHHHHHTTCSC
T ss_pred             cccccccccccccccCcceEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHhCcc
Confidence                        134589999999999999999999999999999999965443

>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src kinase-associated phosphoprotein SKAP55 (SCAP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=8.4e-21  Score=120.35  Aligned_cols=96  Identities=16%  Similarity=0.303  Sum_probs=80.1

Q ss_pred             ceEEEEEeeCC----CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecc--ccCCCCceEEEEeCC
Q 035610           28 GAIGPANKQGD----YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE--DVLNKPFAFEHSRGG  101 (144)
Q Consensus        28 ~~~G~L~k~~~----~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~--~~~~~~~~f~I~~~~  101 (144)
                      +++|||.|++.    ..+.|++|||+|.++.|.||+++.    +..+.+.|+|.++.......  ....++++|.|.+.+
T Consensus         2 ik~G~L~k~~~~~~~~~~~Wkkr~~vL~~~~L~y~~~~~----~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~i~~~~   77 (106)
T d1u5da1           2 IKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEK----SKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQD   77 (106)
T ss_dssp             EEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTT----CSSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSS
T ss_pred             eEEEEEEEECCCCCCCcCCcEEEEEEEECCEEEEEeccc----ccccccccccCCceEeeccccccccCCceeEEEEcCC
Confidence            58999999753    346899999999999999999887    78899999999976543332  224567999999864


Q ss_pred             -eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610          102 -YTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       102 -~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                       +.|+|+|+|.+++++|+++|+.++.+
T Consensus        78 ~~~~~f~a~s~~e~~~W~~ai~~~i~~  104 (106)
T d1u5da1          78 RRTYEFTATSPAEARDWVDQISFLLKD  104 (106)
T ss_dssp             SCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence             78999999999999999999999854

>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phosphoinositol 3-phosphate binding protein-1, PEPP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=5e-20  Score=116.60  Aligned_cols=95  Identities=24%  Similarity=0.328  Sum_probs=80.1

Q ss_pred             CceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeec-cccCCCCceEEEEeC-CeE
Q 035610           27 PGAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA-EDVLNKPFAFEHSRG-GYT  103 (144)
Q Consensus        27 ~~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~-~~~~~~~~~f~I~~~-~~~  103 (144)
                      +.++|||.|++. ..+.|++|||+|.++.|+||+++.    ...+.+.++|.++..+... ....+.+++|.|.++ .+.
T Consensus         9 ~~~~G~L~k~~~~~~k~W~kr~~vL~~~~L~~y~~~~----~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~~i~~~~~~~   84 (107)
T d1upqa_           9 VHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSR----EESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRT   84 (107)
T ss_dssp             EEEEEEEEEECSSSSCCEEEEEEEEETTEEEEESSTT----CCSCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTSCC
T ss_pred             eeEEEEEEEeCCCCCCCeeEEEEEEECCEEEEecCcc----cccccceecccceEEEEeccCcccCcceEEEEEcCCCeE
Confidence            469999999864 567899999999999999999887    7789999999997665433 233566789999876 578


Q ss_pred             EEEEcCCHHHHHHHHHHHHHHH
Q 035610          104 MYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus       104 ~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      |+|+|+|.+++++|+.+|+.|.
T Consensus        85 ~~~~a~s~~e~~~Wi~al~~A~  106 (107)
T d1upqa_          85 YVLAADTLEDLRGWLRALGRAS  106 (107)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCHHHHHHHHHHHHHHh
Confidence            9999999999999999999975

>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src-associated adaptor protein Skap2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=3.7e-20  Score=118.33  Aligned_cols=96  Identities=14%  Similarity=0.148  Sum_probs=80.6

Q ss_pred             CCceEEEEEeeCC----CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc--cCCCCceEEEEe
Q 035610           26 QPGAIGPANKQGD----YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED--VLNKPFAFEHSR   99 (144)
Q Consensus        26 ~~~~~G~L~k~~~----~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~--~~~~~~~f~I~~   99 (144)
                      ...++|||.|++.    ..+.|++|||+|.++.|+||+++.    +..+.+.|+|.++..+.....  ...++++|.|.+
T Consensus         8 ~v~k~G~L~k~~~~~~~~~~~W~~r~~vL~~~~L~~y~~~~----~~~p~g~i~L~~~~~~~~~~~~~~~~~~~~f~i~~   83 (111)
T d1u5fa1           8 FVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDK----DKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICA   83 (111)
T ss_dssp             SEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTT----CSSCSEEEECTTCEEEECTTSCSSTTGGGEEEEEC
T ss_pred             CeeEEEEEEEECCCCCCCcCCceEEEEEEECCEEEeecccc----ccCcceEEEecccEEEeeccccccccccceEEEEc
Confidence            4578999999864    346899999999999999999887    778999999999776544332  345679999998


Q ss_pred             C-CeEEEEEcCCHHHHHHHHHHHHHHH
Q 035610          100 G-GYTMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus       100 ~-~~~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      + ++.|+|+|+|.+|+++|+++|+.++
T Consensus        84 ~~~~~~~~~a~s~~e~~~W~~ai~~~i  110 (111)
T d1u5fa1          84 PDKRIYQFTAASPKDAEEWVQQLKFIL  110 (111)
T ss_dssp             TTSCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred             cCCcEEEEEcCCHHHHHHHHHHHHHHh
Confidence            6 5699999999999999999999875

>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: SH2 and PH domain-containing adapter protein APS
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=1.9e-20  Score=124.25  Aligned_cols=116  Identities=12%  Similarity=0.110  Sum_probs=89.6

Q ss_pred             CCCCCCCCCCCceeecCCceEEEEEee--------CCCCCCceeEEEEEeCC------eEEEEecCCCCCCCCCcceEEe
Q 035610           10 GQDPNPVDYKGIEFWSQPGAIGPANKQ--------GDYIKTWLRRWFILKQG------EHFWFKDSHNITRGSTPRGFIP   75 (144)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~G~L~k~--------~~~~~~w~~R~fvL~~~------~l~y~k~~~~~~~~~~~~~~i~   75 (144)
                      |.++++.+...-....++.|+|||.++        +++.+.|++|||||+++      .|.||+++.    ...+.+.|.
T Consensus         1 g~~~~~~~~~~~~~~~~v~keG~L~~~~~~~~~~~~~~~~~WkkrwfvL~~~~~~~~~~L~yy~~~~----~~k~~g~i~   76 (136)
T d1v5ma_           1 GSSGSSGNLAAKVELVDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPK----ASRPKVSIP   76 (136)
T ss_dssp             CCCCCCCCCCCCCCSCSCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESSTT----SSSCSSCEE
T ss_pred             CCCCCCCccccccccceeeEEEEEEeeccccccCCCCCCCCceEEEEEEeCCcccchhhhhhhCccc----ccCcCccee
Confidence            345555554444456788899999753        24568999999999975      488999987    788999999


Q ss_pred             CCceEEEeec--cccCCCCceEEEEeCCe-EEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610           76 VGTCLTVKCA--EDVLNKPFAFEHSRGGY-TMYSVADTEKEKGERINSIGRAIVQHS  129 (144)
Q Consensus        76 L~~~~~v~~~--~~~~~~~~~f~I~~~~~-~~~l~a~s~~e~~~Wi~al~~ai~~~~  129 (144)
                      |..+..+...  .+...++|+|.|.++++ .|+|+|+|++|+++||++|+.++....
T Consensus        77 l~~~~~~~~~~~~~~~~~~~~F~l~t~~~~~y~f~A~s~~e~~~Wv~ai~~ai~~~~  133 (136)
T d1v5ma_          77 LSAIIEVRTTMPLEMPEKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCVDSGP  133 (136)
T ss_dssp             TTTCCBCCCCCCSSSCCCTTEECCBCTTSCBEEEECSSHHHHHHHHHHHHHHHHHSC
T ss_pred             cccceeeeeeccccCCCCCcEEEEEcCCCcEEEEECCCHHHHHHHHHHHHHHHhcCC
Confidence            9886554322  23356789999998875 588999999999999999999987543

>d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Calcium-dependent activator protein for secretion, CAPS
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=3.3e-20  Score=121.03  Aligned_cols=106  Identities=18%  Similarity=0.205  Sum_probs=79.9

Q ss_pred             ecCCceEEEEEeeCC-CCCCceeEEEEEeCCe--EEEEecCCCCCCCCCcceEEeCCceEEEeecc--ccCCCCceEEEE
Q 035610           24 WSQPGAIGPANKQGD-YIKTWLRRWFILKQGE--HFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE--DVLNKPFAFEHS   98 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~-~~~~w~~R~fvL~~~~--l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~--~~~~~~~~f~I~   98 (144)
                      .....++|||+|++. ..+.|++|||||.++.  ++|+.+..  .....+++.|.+..+..+....  ......+.|.|.
T Consensus         5 ~~~~~~~G~L~K~g~~~~k~WkkRwfvL~~~~~~~yy~~~~~--~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~i~   82 (126)
T d1wi1a_           5 SSGMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYR--EKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAV   82 (126)
T ss_dssp             CCCEEEEEEEEEECSSSCCSCEEEEEEEEEEETTEEEEEECC--SSSSCCSEEEECSSCEEEECCCCSSCCSCSSEEEEE
T ss_pred             CCCCcEEEEEEEECCCCCCCceEEEEEEeCCceEEEEEcccc--cccccceeeeeeceeeeeeccccccccccceeEEec
Confidence            344568999999985 4689999999998754  44555443  1245678999999876644332  223455778888


Q ss_pred             eCCeEEEEEcCCHHHHHHHHHHHHHHHHhcCCC
Q 035610           99 RGGYTMYSVADTEKEKGERINSIGRAIVQHSRS  131 (144)
Q Consensus        99 ~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~~~~  131 (144)
                      ++++.|+|+|+|++|+.+||++|++|+.+....
T Consensus        83 ~~~r~~~f~A~s~~e~~~Wv~al~~a~~~~~~~  115 (126)
T d1wi1a_          83 KEGDTVIFASDDEQDRILWVQAMYRATGQSHKP  115 (126)
T ss_dssp             CSSCEEEEECSSHHHHHHHHHHHHHHHTCSSCC
T ss_pred             cCCeEEEEEECCHHHHHHHHHHHHHHHHhhcCC
Confidence            999999999999999999999999998654433

>d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Phosphotyrosine-binding domain (PTB)
domain: Insulin receptor substrate 1, IRS-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.3e-20  Score=117.85  Aligned_cols=92  Identities=17%  Similarity=0.332  Sum_probs=76.2

Q ss_pred             CceEEEEEeeCCCCCCceeEEEEEeCC-------eEEEEecCCC-CCCCCCcceEEeCCceEEEeeccccCCCCceEEEE
Q 035610           27 PGAIGPANKQGDYIKTWLRRWFILKQG-------EHFWFKDSHN-ITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHS   98 (144)
Q Consensus        27 ~~~~G~L~k~~~~~~~w~~R~fvL~~~-------~l~y~k~~~~-~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~   98 (144)
                      +.++|||.|+    +.|++|||+|.+.       .|.||+++.+ ......+.+.|+|..|..+..... ...+++|.|.
T Consensus         2 v~k~GyL~K~----k~WkkR~fvL~~~~~~~~~~~L~yy~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~-~~~~~~f~i~   76 (103)
T d1qqga1           2 VRKVGYLRKP----KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRAD-SKNKHLVALY   76 (103)
T ss_dssp             EEEEEEEECT----TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEECC-SSCSSEEEEE
T ss_pred             cceeEEEEEc----CCCCEEEEEEecccccCCccEEEEEcchhhhhcccccccceEecceeeEEeeccc-CCCceEEEEE
Confidence            5689999987    4799999999875       4899987531 123567889999999877755544 4678999999


Q ss_pred             eCCeEEEEEcCCHHHHHHHHHHHHH
Q 035610           99 RGGYTMYSVADTEKEKGERINSIGR  123 (144)
Q Consensus        99 ~~~~~~~l~a~s~~e~~~Wi~al~~  123 (144)
                      ++++.|+|+|+|++|+++||++|++
T Consensus        77 t~~r~~~l~A~s~~e~~~Wi~al~~  101 (103)
T d1qqga1          77 TRDEHFAIAADSEAEQDSWYQALLQ  101 (103)
T ss_dssp             ESSCEEEEECSSHHHHHHHHHHHHH
T ss_pred             eCCeEEEEEcCCHHHHHHHHHHHHh
Confidence            9999999999999999999999987

>d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dedicator of cytokinesis protein 9, DOCK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.2e-19  Score=122.04  Aligned_cols=98  Identities=24%  Similarity=0.318  Sum_probs=79.2

Q ss_pred             cCCceEEEEEeeCCC------CCCceeEEEEEeCC-----eEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCc
Q 035610           25 SQPGAIGPANKQGDY------IKTWLRRWFILKQG-----EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPF   93 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~------~~~w~~R~fvL~~~-----~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~   93 (144)
                      ....++|||+|++..      .+.|++|||||+++     .|.||+++.   ....+.+.|+|..|..+...+.  .+++
T Consensus        16 ~~v~k~G~L~K~~~~~~~~~~~k~WkkR~fvL~~~~~~~~~L~yy~~~~---~~~~~~g~i~l~~~~~~~~~~~--~~~~   90 (150)
T d1wg7a_          16 GGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEK---ISKEPKGSIFLDSCMGVVQNNK--VRRF   90 (150)
T ss_dssp             CCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSC---CSSCCSEEECTTTCCEECCCCS--SCTT
T ss_pred             CCEeEEEEEEEecCCCCcccccccceEEEEEEEcCcCCceeEEEEeccc---cccccccccccccccccccCcc--ccce
Confidence            356799999998743      35899999999854     478888764   2467899999999877654443  6789


Q ss_pred             eEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           94 AFEHSRGG-YTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        94 ~f~I~~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      +|.|.+++ +.|+|+|++.+|+++||.+|+.++..
T Consensus        91 ~F~i~~~~~~~~~l~A~s~~e~~~Wi~aL~~~i~~  125 (150)
T d1wg7a_          91 AFELKMQDKSSYLLAADSEVEMEEWITILNKILQL  125 (150)
T ss_dssp             EEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCCeEEEEEeCCHHHHHHHHHHHHHHHHh
Confidence            99999764 78999999999999999999998754

>d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: 3-phosphoinositide dependent protein kinase-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.1e-20  Score=125.75  Aligned_cols=96  Identities=20%  Similarity=0.239  Sum_probs=80.5

Q ss_pred             CceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEE
Q 035610           27 PGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYS  106 (144)
Q Consensus        27 ~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l  106 (144)
                      .+++|||.|+++.  .|++|||||+++.|.||+++.    ...+.|.|+|+.+..+..     ..+++|.|.+++++|+|
T Consensus        48 ilK~G~L~Kr~~~--~wkkR~FvL~~~~L~YYkd~~----~~~~kG~I~L~~~~~v~~-----~~~~~F~I~t~~Rty~l  116 (147)
T d1w1ha_          48 ILKMGPVDKRKGL--FARRRQLLLTEGPHLYYVDPV----NKVLKGEIPWSQELRPEA-----KNFKTFFVHTPNRTYYL  116 (147)
T ss_dssp             EEEEEEEEECCTT--SCEEEEEEEETTTEEEEEETT----TTEEEEEECCCTTCEEEE-----EETTEEEEECSSCEEEE
T ss_pred             EEEEEEEEeecCC--cceEEEEEEcCCeeEEEeCCC----cccccceEEecccccccc-----ccCceEEEecCceEEEE
Confidence            4589999999753  699999999999999999987    778999999999776643     34589999999999999


Q ss_pred             EcCCHHHHHHHHHHHHHHHHhcCCCCCc
Q 035610          107 VADTEKEKGERINSIGRAIVQHSRSVTE  134 (144)
Q Consensus       107 ~a~s~~e~~~Wi~al~~ai~~~~~~~~~  134 (144)
                      .|.+ .++.+|+.+|+.++...-....+
T Consensus       117 ~a~~-~d~~~Wv~aI~~v~~~~~~~~~~  143 (147)
T d1w1ha_         117 MDPS-GNAHKWCRKIQEVWRQRYQSHPD  143 (147)
T ss_dssp             ECTT-SCHHHHHHHHHHHHHHHHCSSTT
T ss_pred             EcCh-HHHHHHHHHHHHHHHHHhhhCcc
Confidence            8865 68999999999988766544443

>d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.82  E-value=1.6e-19  Score=116.99  Aligned_cols=98  Identities=15%  Similarity=0.230  Sum_probs=76.6

Q ss_pred             ecCCceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC-C
Q 035610           24 WSQPGAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG-G  101 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~-~  101 (144)
                      ..+++++|||.|+|+ ..+.|++|||||.++.|+||+++.      .+.+.|.|..+..|.....  ..+++|.|.++ +
T Consensus         7 ~~~~i~eG~L~K~g~~~~~~WkkR~fvL~~~~L~yy~~~~------~~~~~i~l~~~~~v~~~~~--~~~~~f~i~~~~~   78 (119)
T d1omwa2           7 GKDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEGE------APQSLLTMEEIQSVEETQI--KERKCLLLKIRGG   78 (119)
T ss_dssp             TSCCCEEEEEEECC------CEEEEEEEETTEEEEECTTS------CCCEEEEGGGEEEEEEEES--SSCEEEEEEETTS
T ss_pred             CCCeEEEEEEEEECCCCCCCeEEEEEEEEcCeEEEEeccc------ccCccceeccccccccccc--cccceEEEEcCCC
Confidence            346779999999986 456799999999999999998764      3567899988777654433  56678888865 5


Q ss_pred             eEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610          102 YTMYSVADTEKEKGERINSIGRAIVQHS  129 (144)
Q Consensus       102 ~~~~l~a~s~~e~~~Wi~al~~ai~~~~  129 (144)
                      +.|+|+|+|.+++.+|+.+|+.|+....
T Consensus        79 ~~~~f~a~s~~e~~~W~~al~~a~~~~~  106 (119)
T d1omwa2          79 KQFVLQCDSDPELVQWKKELRDAYREAQ  106 (119)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence            7999999999999999999999876543

>d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Tapp2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=2.3e-19  Score=117.06  Aligned_cols=102  Identities=20%  Similarity=0.332  Sum_probs=76.6

Q ss_pred             cCCceEEEEEeeC-CCCCCceeEEEEEe--CCeEEEEecCCC-CCCCCCcceEEeCCceEEEeecc--ccCCCCceEEEE
Q 035610           25 SQPGAIGPANKQG-DYIKTWLRRWFILK--QGEHFWFKDSHN-ITRGSTPRGFIPVGTCLTVKCAE--DVLNKPFAFEHS   98 (144)
Q Consensus        25 ~~~~~~G~L~k~~-~~~~~w~~R~fvL~--~~~l~y~k~~~~-~~~~~~~~~~i~L~~~~~v~~~~--~~~~~~~~f~I~   98 (144)
                      .+..++|||.|++ ...+.|++|||||.  ++.|+||+++.. ......+.+.|.+..+..+....  ......++|.+.
T Consensus        13 ~~~~~~GyL~k~~~~~~k~WkrRwFvL~~~~~~L~yy~~~~~~~~~g~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (126)
T d1v5pa_          13 RQNRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKPKTPFCFVIN   92 (126)
T ss_dssp             CCCCEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECCTTTSCSCSSEEEEE
T ss_pred             CCCceeeeEEEECCCCCCCeeEEEEEEEcCCCeEEEeeccccccccceeecccceeeeeeccccccccccccccceEEEc
Confidence            3446899999986 56789999999995  678999998761 11122345566666655444332  223556899999


Q ss_pred             eCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610           99 RGGYTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus        99 ~~~~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      ++.+.|+|+|+|++|+.+||++|+.|+.
T Consensus        93 ~~~r~~~l~Aes~~e~~~Wi~aL~~A~~  120 (126)
T d1v5pa_          93 ALSQRYFLQANDQKDLKDWVEALNQASK  120 (126)
T ss_dssp             CSSCEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred             CCCeeEEEECCCHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999763

>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=3.9e-19  Score=111.77  Aligned_cols=94  Identities=26%  Similarity=0.333  Sum_probs=74.7

Q ss_pred             ceEEEEEeeCCCCCCceeEEEEEeCCe--EEEEecCCCCCCCCCcceEEeCCceEEEeeccc----cCCCCceEEEEeCC
Q 035610           28 GAIGPANKQGDYIKTWLRRWFILKQGE--HFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED----VLNKPFAFEHSRGG  101 (144)
Q Consensus        28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~--l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~----~~~~~~~f~I~~~~  101 (144)
                      +++|||.|+++..+.|++|||+|.++.  ++|++.+.    +..+.+.|++.++..+.....    .....++|.+.+++
T Consensus         3 ~k~G~L~k~~~~~k~WkkR~fvL~~~~~~l~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (104)
T d2i5fa1           3 IKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAG----AEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITAD   78 (104)
T ss_dssp             EEEEEEEEECTTTCCEEEEEEEEETTTTEEEEECTTS----CSSCSEEEECTTCEEEEECC--------CCSEEEEECTT
T ss_pred             EEEEEEEEECCCCCCcEEEEEEEECCeeEEEEEcCcc----ccCccceEeecceEEEEeccCcccccccCccEEEEECCC
Confidence            589999999988899999999999864  44555554    678899999999777543321    23556899998654


Q ss_pred             -eEEEEEcCCHHHHHHHHHHHHHHH
Q 035610          102 -YTMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus       102 -~~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                       +.|+|+|+|++|+.+|+++|+.|+
T Consensus        79 ~~~~~~~a~s~~e~~~W~~ai~~a~  103 (104)
T d2i5fa1          79 EVHYFLQAATPKERTEWIKAIQMAS  103 (104)
T ss_dssp             CCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEcCCHHHHHHHHHHHHHHh
Confidence             678999999999999999999987

>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src-associated adaptor protein Skap2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=2.2e-19  Score=126.61  Aligned_cols=98  Identities=13%  Similarity=0.143  Sum_probs=82.6

Q ss_pred             CCceEEEEEeeCC----CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc--cCCCCceEEEEe
Q 035610           26 QPGAIGPANKQGD----YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED--VLNKPFAFEHSR   99 (144)
Q Consensus        26 ~~~~~G~L~k~~~----~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~--~~~~~~~f~I~~   99 (144)
                      .+.++|||.|++.    ..+.|++|||+|.++.|+||+++.    +..+.+.|+|.++..+.....  ...++++|.|.+
T Consensus       103 ~~~k~G~L~K~~~~~~~~~~~Wkkr~fvL~~~~L~yy~~~~----~~~~~~~i~L~~~~~~~~~~~~~~~~~~~~F~i~~  178 (209)
T d1u5ea1         103 FVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDK----DKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICA  178 (209)
T ss_dssp             SEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTT----CSSCSEEEECTTCEEEECGGGCSSTTGGGEEEEEC
T ss_pred             CeeEEEEEEEecCCCCCccccceEEEEEEECCEEEEEecCC----CCccceEEEecceeeeeccccccccCCCcEEEEEc
Confidence            4568999999863    457999999999999999999987    778999999999766543322  245679999998


Q ss_pred             C-CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610          100 G-GYTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       100 ~-~~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      + .+.|+|+|+|.+++..|+.+|+.++..
T Consensus       179 ~~~r~~~f~a~s~~e~~~Wi~al~~~i~~  207 (209)
T d1u5ea1         179 PDKRIYQFTAASPKDAEEWVQQLKFILQD  207 (209)
T ss_dssp             SSSCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence            6 479999999999999999999998854

>d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: DCC-interacting protein 13-alpha, APPL1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.2e-20  Score=117.97  Aligned_cols=91  Identities=15%  Similarity=0.227  Sum_probs=68.3

Q ss_pred             CceEEEEEeeC---CCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC--
Q 035610           27 PGAIGPANKQG---DYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG--  101 (144)
Q Consensus        27 ~~~~G~L~k~~---~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~--  101 (144)
                      +.++|||.++.   ...+.|++|||||+++.|+||+...     ..+.+.++|.+|. |...++ ..++++|.|.+++  
T Consensus         5 ~~k~G~L~k~~~~g~~~k~W~kRwfvL~~~~L~y~~~~~-----~~~~~~i~l~~~~-v~~~~~-~~~~~~f~i~~~~~~   77 (101)
T d2elba2           5 TRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQARGD-----VAGGLAMDIDNCS-VMAVDC-EDRRYCFQITSFDGK   77 (101)
T ss_dssp             SCCEEEEEECSCCC----CCCEEEEEEETTEEEEECTTC-----CCE----EEEECC-CCCCCC-CCSSSSSEECCCSSS
T ss_pred             ccEeEEEEEeccCCCCccccEEEEEEEeCCEEEEEccCC-----cccceEEEecccc-cccccc-cCCcceEEEEeeccc
Confidence            45899999984   3457899999999999999988764     5688889998754 444443 3677999998654  


Q ss_pred             eEEEEEcCCHHHHHHHHHHHHHH
Q 035610          102 YTMYSVADTEKEKGERINSIGRA  124 (144)
Q Consensus       102 ~~~~l~a~s~~e~~~Wi~al~~a  124 (144)
                      +.|+|+|+|.+|+.+||.||+.+
T Consensus        78 ~~~~l~A~s~~e~~~Wi~al~~v  100 (101)
T d2elba2          78 KSSILQAESKKDHEEWICTINNI  100 (101)
T ss_dssp             CCCCEECSSHHHHHHHHHHHHHT
T ss_pred             ceEEEECCCHHHHHHHHHHHHhc
Confidence            78999999999999999999873

>d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rac-alpha serine/threonine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=5.7e-20  Score=118.23  Aligned_cols=100  Identities=21%  Similarity=0.244  Sum_probs=77.0

Q ss_pred             cCCceEEEEEeeCCCCCCceeEEEEEeC-CeEEEEecCCCCCCCCCcceEEeCCceEEEe--eccccCCCCceEEEEeC-
Q 035610           25 SQPGAIGPANKQGDYIKTWLRRWFILKQ-GEHFWFKDSHNITRGSTPRGFIPVGTCLTVK--CAEDVLNKPFAFEHSRG-  100 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~-~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~--~~~~~~~~~~~f~I~~~-  100 (144)
                      ...+++|||.|+|+..+.|++|||||.+ +.|+||+++.    ...+.+.++|..+..+.  .......++++|.|... 
T Consensus         5 ~~v~k~G~L~K~~~~~k~Wk~RwfvL~~~~~l~~~~~~~----~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~i~~~~   80 (118)
T d1unqa_           5 VAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERP----QDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQ   80 (118)
T ss_dssp             GCEEEEEEEEEECSSSCCEEEEEEEEETTSEEEEESSCC----CSHHHHTSCSEEEECTTCEEEEECSSSTTEEEEEEEE
T ss_pred             CCEEEEEEEEEECCCCCCcEEEEEEEeccceeEEEeecc----CccccccccccceEEeecccccccccCCceEEEEecc
Confidence            3567999999999999999999999986 5788888776    56677777777654321  11222467799999842 


Q ss_pred             ---CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          101 ---GYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       101 ---~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                         .+.++|+|+|.+|+++|+.+|+.++...
T Consensus        81 ~~~~~~~~f~a~s~~e~~~Wi~ai~~~~~~~  111 (118)
T d1unqa_          81 WTTVIERTFHVETPEEREEWTTAIQTVADGL  111 (118)
T ss_dssp             TTEEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             ccceeEEEEEeCCHHHHHHHHHHHHHHHHHh
Confidence               2568899999999999999999998653

>d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: KIAA1914
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2.4e-19  Score=111.73  Aligned_cols=91  Identities=13%  Similarity=0.221  Sum_probs=74.5

Q ss_pred             ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC-CeEEEE
Q 035610           28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG-GYTMYS  106 (144)
Q Consensus        28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~-~~~~~l  106 (144)
                      .++|||.+.+.  +.|++|||+|+++.|+||+++.   ....+.+.++|.++..+ ..++ ..++++|.+.++ ++.|+|
T Consensus         2 ~~s~yl~~~~~--~~WkkR~fvL~~~~L~yyk~~~---~~~~~~~~i~l~~~~v~-~~~~-~~~~~~f~~~~~~~~~~~l   74 (95)
T d2cofa1           2 ETSSYLNVLVN--SQWKSRWCSVRDNHLHFYQDRN---RSKVAQQPLSLVGCEVV-PDPS-PDHLYSFRILHKGEELAKL   74 (95)
T ss_dssp             TTCCEEEEEET--TEEEEEEEEECSSCEEEECSST---TCSEEEEEECTTTCEEE-CCCB-TTBSCEEEEEETTEEEEEE
T ss_pred             CcccchhhhcC--CCceEEEEEEECCEEEEEeccc---ccccccccccccceEEE-eccc-ccceecceeccccceeEEe
Confidence            36899999874  6799999999999999999865   13457899999997554 3333 367799998865 578999


Q ss_pred             EcCCHHHHHHHHHHHHHHH
Q 035610          107 VADTEKEKGERINSIGRAI  125 (144)
Q Consensus       107 ~a~s~~e~~~Wi~al~~ai  125 (144)
                      +|+|.+|+++||.+|+.+.
T Consensus        75 ~A~s~~e~~~Wi~~L~~~t   93 (95)
T d2cofa1          75 EAKSSEEMGHWLGLLLSES   93 (95)
T ss_dssp             ECSSHHHHHHHHHHHHHHS
T ss_pred             eCCCHHHHHHHHHHHHHHh
Confidence            9999999999999999864

>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=4e-19  Score=113.77  Aligned_cols=100  Identities=21%  Similarity=0.277  Sum_probs=74.8

Q ss_pred             eeecCCceEEEEEeeCCCCCCceeEEEEEeCCeE--EEEecCCCCCCCCCcceEEeCCceEEEeeccc-------cCCCC
Q 035610           22 EFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEH--FWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-------VLNKP   92 (144)
Q Consensus        22 ~~~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l--~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-------~~~~~   92 (144)
                      +...+..++|||.|++...+.|++|||+|.++.+  +||....   ....|.+.|+|.++..+.....       .....
T Consensus         6 ~~~~~v~k~G~L~K~~~~~k~WkkR~fvL~~~~~~~~~~~~~~---~~~~p~~~i~L~~~~i~~~~~~~~~~~~~~~~~~   82 (116)
T d1x1ga1           6 ELSGTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSK---EENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQG   82 (116)
T ss_dssp             TTCSEEEEEEEEEEECSSSSSEEEEEEEEEESSCEEEEECSSS---CCSSCSCCEESTTCCCEECCSSSSCSSCSSCCCS
T ss_pred             cCCCCEEEEEEEEEEcCCCCCCceEEEEEECCCcEEEEecccc---ccccceeEEEcCCCEEEEecccCccccccccccc
Confidence            3445667999999999988999999999987553  3443222   2457899999999765332211       13445


Q ss_pred             ceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 035610           93 FAFEHSRGG-YTMYSVADTEKEKGERINSIGRA  124 (144)
Q Consensus        93 ~~f~I~~~~-~~~~l~a~s~~e~~~Wi~al~~a  124 (144)
                      ++|.|.+++ +.|+|+|++++|+++|++||+++
T Consensus        83 ~~f~i~~~~~~~~~f~a~s~ee~~~Wi~ai~~~  115 (116)
T d1x1ga1          83 NLFKVITKDDTHYYIQASSKAERAEWIEAIKKL  115 (116)
T ss_dssp             SCEEECCTTCCCEEECCSSHHHHHHHHHHHHHH
T ss_pred             ceeEEEeCCCeEEEEECCCHHHHHHHHHHHHhh
Confidence            789998764 57899999999999999999985

>d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Human (Homo sapiens), brain 2 isoform [TaxId: 9606]

Probab=99.74  E-value=1.6e-17  Score=107.53  Aligned_cols=103  Identities=16%  Similarity=0.196  Sum_probs=75.2

Q ss_pred             cCCceEEEEEeeCC--------CCCCceeEEEEEeCCeEEEEecCCCCCC--CCCcceEEeCCceEEEeeccccCCCCce
Q 035610           25 SQPGAIGPANKQGD--------YIKTWLRRWFILKQGEHFWFKDSHNITR--GSTPRGFIPVGTCLTVKCAEDVLNKPFA   94 (144)
Q Consensus        25 ~~~~~~G~L~k~~~--------~~~~w~~R~fvL~~~~l~y~k~~~~~~~--~~~~~~~i~L~~~~~v~~~~~~~~~~~~   94 (144)
                      ..+.++|||.++..        ..+.|++|||+|+++.|+||+++.....  ...+...+.+..|... ...+...++++
T Consensus         6 ~g~~~eG~L~rk~~~~~~~kr~~~k~Wkkrw~vL~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   84 (123)
T d1wjma_           6 SGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGS-VAFDYRKRKHV   84 (123)
T ss_dssp             CCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCEEE-ECTTCSSCSSE
T ss_pred             CCCeeEEEEEEEeeccccCcccCCCCCcEEEEEEECCEEEEEecchhccccccccccccccccceeEE-ecccccccCcE
Confidence            34678999988632        3468999999999999999987531001  1123345566664443 33333578899


Q ss_pred             EEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           95 FEHSRG-GYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        95 f~I~~~-~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      |.|.+. .+.|+|+|+|.+++.+||++|+.|+...
T Consensus        85 f~i~~~~~~~~~l~a~s~~e~~~Wi~aI~~a~~~~  119 (123)
T d1wjma_          85 FKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIASG  119 (123)
T ss_dssp             EEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEcCCCcEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence            999875 5789999999999999999999998764

>d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Mouse (Mus musculus), brain [TaxId: 10090]

Probab=99.74  E-value=1.2e-17  Score=105.54  Aligned_cols=95  Identities=17%  Similarity=0.209  Sum_probs=73.0

Q ss_pred             eEEEEEeeC--------CCCCCceeEEEEEeCCeEEEEecCCC--CCCCCCcceEEeCCceEEEeeccccCCCCceEEEE
Q 035610           29 AIGPANKQG--------DYIKTWLRRWFILKQGEHFWFKDSHN--ITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHS   98 (144)
Q Consensus        29 ~~G~L~k~~--------~~~~~w~~R~fvL~~~~l~y~k~~~~--~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~   98 (144)
                      +||||.+++        ...+.|++|||+|.++.|+||+++..  ......+.+.++|.+|..+. ..+...++++|.|.
T Consensus         1 ~eG~L~rk~~~~~~~kk~~~~~Wk~r~~vL~~~~L~~yk~~~~~~~~~~~~~~~~i~l~~~~~~~-~~~~~~~~~~f~i~   79 (106)
T d1btna_           1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEV-ALDYKKKKHVFKLR   79 (106)
T ss_dssp             CEEEEEEEEEECSTTCBCSCCCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTCEEEE-CSSCCSSSSEEEEE
T ss_pred             CeeeEEEeeEccCCCcccCCCCCcEEEEEEECCEEEEEeChhhcccccccCcceeEEeccceeee-ccccccCcceEeec
Confidence            589999873        13357999999999999999998641  01123456788998865543 33334678999999


Q ss_pred             eC-CeEEEEEcCCHHHHHHHHHHHHHH
Q 035610           99 RG-GYTMYSVADTEKEKGERINSIGRA  124 (144)
Q Consensus        99 ~~-~~~~~l~a~s~~e~~~Wi~al~~a  124 (144)
                      +. ++.|+|+|+|.+++.+|+++|+.|
T Consensus        80 ~~~~~~~~~~a~s~~e~~~W~~ai~~A  106 (106)
T d1btna_          80 LSDGNEYLFQAKDDEEMNTWIQAISSA  106 (106)
T ss_dssp             CTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEECCCHHHHHHHHHHHHhC
Confidence            86 478999999999999999999874

>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.70  E-value=6.7e-17  Score=104.52  Aligned_cols=102  Identities=13%  Similarity=0.148  Sum_probs=73.1

Q ss_pred             cCCceEEEEEeeCC--------CCCCceeEEEEEeCCeEEEEecCCCCC----CCCCcceEEeCCceEEEeeccccCCCC
Q 035610           25 SQPGAIGPANKQGD--------YIKTWLRRWFILKQGEHFWFKDSHNIT----RGSTPRGFIPVGTCLTVKCAEDVLNKP   92 (144)
Q Consensus        25 ~~~~~~G~L~k~~~--------~~~~w~~R~fvL~~~~l~y~k~~~~~~----~~~~~~~~i~L~~~~~v~~~~~~~~~~   92 (144)
                      ....+||||.++..        ..+.|++|||||+++.|+||+++.+..    ....+...+.+..+... ...+....+
T Consensus         6 ~~~~~eG~L~rk~~~~~~~kk~~~~~W~kr~~vL~~~~L~yy~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~   84 (122)
T d1droa_           6 AGEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIE-IASDYTKKK   84 (122)
T ss_dssp             SSSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCE-ECCSSSSST
T ss_pred             CCcceEEEEEEeecccccCcccCCCCceEEEEEEeCCEEEEEcCcccccccCcccccccceEeccceEEE-ecccccccc
Confidence            35668999998742        234799999999999999999875100    01122344555554332 222334677


Q ss_pred             ceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           93 FAFEHSRGG-YTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        93 ~~f~I~~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      ++|.|.+++ +.|+|+|+|++|+++|+.+|+.++..
T Consensus        85 ~~~~l~~~~~~~~~f~a~s~~d~~~Wv~al~~~~~~  120 (122)
T d1droa_          85 HVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSDS  120 (122)
T ss_dssp             TEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHHTC
T ss_pred             ceEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHhc
Confidence            999999875 68999999999999999999998753

>d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rac/CDC42 GEF 6, alpha-pix
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.52  E-value=1.4e-13  Score=90.24  Aligned_cols=104  Identities=13%  Similarity=0.118  Sum_probs=82.7

Q ss_pred             eeecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC-
Q 035610           22 EFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG-  100 (144)
Q Consensus        22 ~~~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~-  100 (144)
                      ....+..+.|++.++....+.++.|||+|.++.|.|++... .......++.|+|.++.. ...++....+++|.|..+ 
T Consensus        23 ~~~G~li~~g~~~~~~~~~~~~k~R~~fLF~~~Ll~~k~~~-~~~~~~~k~~i~l~~~~v-~~~~~~~~~~~~f~i~~~~  100 (132)
T d1v61a_          23 KTLGNVIFMSQVVMQHGACEEKEERYFLLFSSVLIMLSASP-RMSGFMYQGKIPIAGMVV-NRLDEIEGSDCMFEITGST  100 (132)
T ss_dssp             TTTCCCSCEEEEEBCCSSSSCCCEEEEEECSSCEEEEECSS-SSSCCEEEEEECTTTCBC-STTCSSSSSCCCEEEECSS
T ss_pred             hhccCEEEEEEEEEEEecCCCcceEEEEEeCCEEEEEEEcC-CCceeEEeeecchhhccc-cccccccCccceEEEeCCC
Confidence            33567889999999988888999999999999999999654 111344578899999544 333333467799999976 


Q ss_pred             CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610          101 GYTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       101 ~~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      .+.|.+.|.|++|+++||++|++++..
T Consensus       101 ~~~~~l~a~s~eek~~Wv~~L~~~i~~  127 (132)
T d1v61a_         101 VERIVVHCNNNQDFQEWMEQLNRLTKS  127 (132)
T ss_dssp             SCEEEECCCCSHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence            578999999999999999999998844

>d1zc3b1 b.55.1.1 (B:171-279) Exocyst complex protein EXO84 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Exocyst complex protein EXO84
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.23  E-value=2.2e-10  Score=72.05  Aligned_cols=99  Identities=11%  Similarity=-0.100  Sum_probs=75.1

Q ss_pred             ceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEE
Q 035610           28 GAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYS  106 (144)
Q Consensus        28 ~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l  106 (144)
                      +++|.|.+... ..+.-++|+++|-++.|.+.+..............++|..+..+. .++....+|+|.|.++.+.|.|
T Consensus         5 i~eG~l~~~~~~~~k~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~l~~~~v~~-~~d~~~~~n~f~i~~~~~~~~~   83 (109)
T d1zc3b1           5 VYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRRGMYRYNALYPLDRLAVVN-VKDNPPMKDMFKLLMFPESRIF   83 (109)
T ss_dssp             EEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTTSCEEEEEEEETTTCEEEE-ECCBTTBSSEEEEEETTEEEEE
T ss_pred             EEeeeEEEEccCCCCcceeEEEEEecCEEEEEEEcCCcceEEEeeeEEeccceEEEE-eecccccceEEEEccCCCEEEE
Confidence            57899988743 334467899999999999877533111123456788999955543 3333467799999999999999


Q ss_pred             EcCCHHHHHHHHHHHHHHHHh
Q 035610          107 VADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       107 ~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      +|+|.+|+.+|+++|+.|+.+
T Consensus        84 ~a~s~~eK~~W~~~l~~a~~~  104 (109)
T d1zc3b1          84 QAENAKIKREWLEVLEETKRA  104 (109)
T ss_dssp             ECSSHHHHHHHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999864

>d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho guanine nucleotide exchange factor 9, Collybistin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.21  E-value=3e-10  Score=76.37  Aligned_cols=103  Identities=13%  Similarity=-0.045  Sum_probs=76.6

Q ss_pred             ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc-----CCCCceEEEE
Q 035610           24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV-----LNKPFAFEHS   98 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~-----~~~~~~f~I~   98 (144)
                      ....+++|+|.+.+...+.++.|||+|-++.|.|++............+.++|..+......+..     ...+|+|.|.
T Consensus        24 ~r~Li~eG~L~~~~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~y~~k~~i~L~~~~v~~~~~~~~~~~~~~~~~~f~i~  103 (162)
T d2dfka2          24 SSELIYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLH  103 (162)
T ss_dssp             CCCEEEEEEEEEESSTTCCCEEEEEEEETTEEEEEEECSSCTTCEEEEEEEEGGGEEEEECCSEECSSSCCEESSEEEEE
T ss_pred             CceEEEEEEEEEEEcCCCCceeEEEEEeCCeEEEEEecCCCCCceEEccccchhhceeeecccccccccCccccceEEEE
Confidence            44667899999998767789999999999999999865411123345788889886554322211     1235889998


Q ss_pred             eC--CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610           99 RG--GYTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus        99 ~~--~~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      .+  ++.|.|.|.|.+++.+||++|+.++.
T Consensus       104 ~~~~~~~~~~~A~s~~eK~~W~~~l~~~~~  133 (162)
T d2dfka2         104 NKETEEVHLFFAKKLEEKIRWLRAFREERK  133 (162)
T ss_dssp             ESSSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             ECCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence            54  56799999999999999999998653

>d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phospholipase C delta-1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.95  E-value=5.2e-09  Score=66.57  Aligned_cols=94  Identities=12%  Similarity=0.179  Sum_probs=64.8

Q ss_pred             eEE-EEEeeCCCCCCceeEEEEEeCC-eEEEEecCCCCCCCCCcceEEeCCceEEEeecccc---------CCCCceEEE
Q 035610           29 AIG-PANKQGDYIKTWLRRWFILKQG-EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV---------LNKPFAFEH   97 (144)
Q Consensus        29 ~~G-~L~k~~~~~~~w~~R~fvL~~~-~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~---------~~~~~~f~I   97 (144)
                      ++| .|.|-+. .+..++|||.|..+ .+.+|.+..  .....+.+.|+|+.+..|....+.         .....+|.|
T Consensus        12 ~~G~~l~K~~~-~~~~k~R~f~L~~d~~~i~~~~~~--~~~~~~~~~i~i~~I~~V~~G~~s~~~~~~~~~~~~~~~FsI   88 (119)
T d1maia_          12 LKGSQLLKVKS-SSWRRERFYKLQEDCKTIWQESRK--VMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSI   88 (119)
T ss_dssp             HHCEEEEEESS-SSCEEEEEEEECTTSSEEEECCCC--TTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGGEEEE
T ss_pred             HcCCeEEEeCC-CCCCEEEEEEEcCCCCEEEEeCCC--CCCCccceEEEHHHceEEEcCCCCchhhhcccCCCcCceEEE
Confidence            456 4666543 22346799999764 455665442  113345789999998888765321         122478999


Q ss_pred             E--eCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 035610           98 S--RGGYTMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus        98 ~--~~~~~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      .  +..+++.|.|+|.+++..|+.+|+..+
T Consensus        89 v~~~~~r~l~l~a~s~~~~~~Wv~~L~~L~  118 (119)
T d1maia_          89 VFKDQRNTLDLIAPSPADAQHWVQGLRKII  118 (119)
T ss_dssp             EESSSCCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred             EEcCCCcEEEEEECCHHHHHHHHHHHHHHh
Confidence            8  445789999999999999999999865

>d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Son of sevenless-1 (sos-1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=1.5e-08  Score=65.60  Aligned_cols=95  Identities=15%  Similarity=0.085  Sum_probs=70.2

Q ss_pred             CCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCC-------CCCCcceEEeCCceEEEeeccccCCCCceEEEE
Q 035610           26 QPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNIT-------RGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHS   98 (144)
Q Consensus        26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~-------~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~   98 (144)
                      .-.++|.|.+.+..    +.||++|-++.|.|.+......       .....++.++|+.+. |....+....+++|.|.
T Consensus        26 ~li~eG~l~~~~~~----k~r~~fLF~d~Li~~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~-v~~~~~~~~~~~~f~i~  100 (133)
T d1dbha2          26 EFIMEGTLTRVGAK----HERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQ-INDKDDTNEYKHAFEII  100 (133)
T ss_dssp             CEEEEEEEEETTCS----SCEEEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCE-EEECCCSSSCCSEEEEC
T ss_pred             EEEEEeEEEEecCC----CeEEEEEecCeEEEEEecccccccccCCCccEEEEeeeeccccc-ccccCCCcccccceeEE
Confidence            45579999987643    6899999999999998654100       011235788999954 44444434677999998


Q ss_pred             eCC-eEEEEEcCCHHHHHHHHHHHHHHH
Q 035610           99 RGG-YTMYSVADTEKEKGERINSIGRAI  125 (144)
Q Consensus        99 ~~~-~~~~l~a~s~~e~~~Wi~al~~ai  125 (144)
                      .+. +.|.|.|.|++++.+|+++|..+.
T Consensus       101 ~~~~~~~~l~a~s~~eK~~W~~~l~~~~  128 (133)
T d1dbha2         101 LKDENSVIFSAKSAEEKNNWMAALISLQ  128 (133)
T ss_dssp             CTTSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEEECCHHHHHHHHHHHHHHH
Confidence            754 578999999999999999998765

>d1ki1b2 b.55.1.1 (B:1439-1580) GEF of intersectin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: GEF of intersectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=1.7e-08  Score=66.09  Aligned_cols=99  Identities=13%  Similarity=-0.049  Sum_probs=67.9

Q ss_pred             cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCC-------------CCCcceEEeCCceEEEeeccccCCC
Q 035610           25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITR-------------GSTPRGFIPVGTCLTVKCAEDVLNK   91 (144)
Q Consensus        25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~-------------~~~~~~~i~L~~~~~v~~~~~~~~~   91 (144)
                      ..-+++|.|.|...    =+.||+.|-++.|.|-+.......             ....+..+.|..+ .+....+....
T Consensus        23 R~li~eG~L~k~~~----~k~r~~FLFnD~Ll~tK~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~l-~v~~~~d~~~~   97 (142)
T d1ki1b2          23 RKFLHSGKLYKAKN----NKELYGFLFNDFLLLTQITKPLGSSGTDKVFSPKSNLQYMYKTPIFLNEV-LVKLPTDPSGD   97 (142)
T ss_dssp             CCEEEECCCBCSSS----CCCCEEEEESSEEEEEEEECC-------CCSCSSCCEEEECSSCEEGGGE-EEECCSSSCCC
T ss_pred             eEEEEeeEEEEecC----CCEEEEEEecCEEEEEEeccccceeccccccccCCceeEEEEcccchhhh-eeeccCCcccc
Confidence            44568999877532    258999999999999875431000             0012345677774 44444443455


Q ss_pred             CceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           92 PFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        92 ~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      .+.|.+..+++.|.|.|+|.+|+..|+++|++|+.+.
T Consensus        98 ~~~~~~~~~~~~~~l~a~s~~ek~~W~~~I~~Ai~~~  134 (142)
T d1ki1b2          98 EPIFHISHIDRVYTLRAESINERTAWVQKIKAASELY  134 (142)
T ss_dssp             ---CEEEETTEEEECBCSSHHHHHHHHHHHHHHHHHH
T ss_pred             eeEEEecCCCEEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence            6788888999999999999999999999999998754

>d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=1.6e-06  Score=56.10  Aligned_cols=97  Identities=12%  Similarity=0.019  Sum_probs=63.6

Q ss_pred             CCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCC---CC-----------CCcceEEeCCceEEEeeccccCCC
Q 035610           26 QPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNIT---RG-----------STPRGFIPVGTCLTVKCAEDVLNK   91 (144)
Q Consensus        26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~---~~-----------~~~~~~i~L~~~~~v~~~~~~~~~   91 (144)
                      .-+++|-|..+.. .+..+.||++|-++.|.+-+......   ..           ......+.+.. ..+...   ...
T Consensus        24 ~Li~eG~L~~k~~-~~k~k~r~~FLF~D~Ll~tk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~---~~~   98 (140)
T d1xcga2          24 KMIHEGPLTWRIS-KDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNA-VLIRSV---ATD   98 (140)
T ss_dssp             CEEEEEEEEECCS-SSCCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGG-EEEEEC---SSC
T ss_pred             eEEEEeeEEEEec-CCCceEEEEEEecCeEEEEEecccceeeccccccccccccceeeecceEecce-EEEecC---CCC
Confidence            3457999964432 25778999999999999988654100   00           00112233333 222222   245


Q ss_pred             CceEEEEe-----CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610           92 PFAFEHSR-----GGYTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus        92 ~~~f~I~~-----~~~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      +++|.+..     ....|.|+|.|++|+.+|+++|++||..
T Consensus        99 ~~~f~li~~~~~~~~~~~~l~A~s~~eK~~Wi~~i~~aI~n  139 (140)
T d1xcga2          99 KRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN  139 (140)
T ss_dssp             SSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEcCCCCCceEEEEEcCCHHHHHHHHHHHHHHHHc
Confidence            68888874     3467899999999999999999999865

>d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Triple functional domain protein TRIO
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=6.1e-07  Score=56.76  Aligned_cols=102  Identities=12%  Similarity=0.009  Sum_probs=68.6

Q ss_pred             ecCCceEEEEEeeCC--CCCCceeEEEEEeCCeEEEEecCCCC--CCCCCcceEEeCCceEEEeeccccCCCCceEEEEe
Q 035610           24 WSQPGAIGPANKQGD--YIKTWLRRWFILKQGEHFWFKDSHNI--TRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSR   99 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~--~~~~w~~R~fvL~~~~l~y~k~~~~~--~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~   99 (144)
                      ....++.|.|....+  ..+..+.||+.|-++.|.+-+.....  .........+.+..+ .+....  .+.++.|.|..
T Consensus        10 ~G~Ll~~g~l~v~~~~~~~~k~~~R~~FLF~d~Ll~~K~k~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~f~i~~   86 (121)
T d1ntya2          10 QGELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSEL-GVTEHV--EGDPCKFALWV   86 (121)
T ss_dssp             GCCEEEEEEEEEECSSSSSCCEEEEEEEEESSEEEEEEEEECTTCCEEEEEEEEEEGGGE-EEECCC--TTCTTEEEEEE
T ss_pred             CCcEEEEeEEEEEcccccCCCCcEEEEEeeCCeEEEEEEecCCCCCceeEEEeeEEecce-EEEEcC--CCCCceEEEEE
Confidence            345668898875432  23567899999999999998754200  001122345666663 232222  24568899863


Q ss_pred             -----CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610          100 -----GGYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus       100 -----~~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                           ....|.|+|.|+++++.|+++|++++.+.
T Consensus        87 ~~~~~~~~~~~l~a~s~~eK~~W~~~I~~~i~eq  120 (121)
T d1ntya2          87 GRTPTSDNKIVLKASSIENKQDWIKHIREVIQER  120 (121)
T ss_dssp             SSSCCTTTCEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred             ecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhh
Confidence                 34578999999999999999999998654

>d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho guanine nucleotide exchange factor 12
species: Human (Homo sapiens), gamma isoform [TaxId: 9606]

Probab=98.52  E-value=2.5e-06  Score=53.42  Aligned_cols=95  Identities=17%  Similarity=0.059  Sum_probs=63.4

Q ss_pred             ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCC--C------------CCCCcceEEeCCceEEEeeccccCCCCc
Q 035610           28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNI--T------------RGSTPRGFIPVGTCLTVKCAEDVLNKPF   93 (144)
Q Consensus        28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~--~------------~~~~~~~~i~L~~~~~v~~~~~~~~~~~   93 (144)
                      +.+|-|..+.+ .+.-+.|+++|-++.|.+.+.....  .            .....+..|.|+. ..+....  .+.+.
T Consensus         2 i~eG~L~~~~~-~~k~~er~vFLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~-l~v~e~~--~d~~~   77 (114)
T d1txda2           2 IHEGPLVWKVN-RDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLST-VLVRQVA--TDNKA   77 (114)
T ss_dssp             EEEEEEEEESS-SSCBCCEEEEEESSEEEEEEEETTEEECCC-------------CCCSEEEGGG-EEEEECC--C-CCE
T ss_pred             ceeeeEEEEec-CCCceEEEEEEecCeEEEEEecccccccccccccccccccceeeecCcEEccc-EEEEEcC--CCCCC
Confidence            46899975543 2345789999999999988754310  0            0011234566777 4444332  24567


Q ss_pred             eEEEEeCC---eEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610           94 AFEHSRGG---YTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus        94 ~f~I~~~~---~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      .|.|...+   ..|.|+|.|.++++.|+++|++++.
T Consensus        78 ~fli~~~~~~~~~y~l~A~s~~eK~~W~~~I~~~~~  113 (114)
T d1txda2          78 LFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAA  113 (114)
T ss_dssp             EEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             EEEEEecCCCceEEEEEcCCHHHHHHHHHHHHHHhc
Confidence            78887643   4678999999999999999999874

>d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dbl's big sister, Dbs
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.33  E-value=6.8e-06  Score=53.68  Aligned_cols=102  Identities=12%  Similarity=0.055  Sum_probs=66.9

Q ss_pred             ecCCceEEEEEeeCC-----------CCCCceeEEEEEeCCeEEEEecCCCCCC------CCCcceEEeCCceEEEeecc
Q 035610           24 WSQPGAIGPANKQGD-----------YIKTWLRRWFILKQGEHFWFKDSHNITR------GSTPRGFIPVGTCLTVKCAE   86 (144)
Q Consensus        24 ~~~~~~~G~L~k~~~-----------~~~~w~~R~fvL~~~~l~y~k~~~~~~~------~~~~~~~i~L~~~~~v~~~~   86 (144)
                      ....++.|.+....+           ..+.-+.|||.|-+..|.+.+.......      ....+..+.++.. .+....
T Consensus        10 ~G~Ll~qg~~~v~~~~~~~~~~~~~~~~~K~~~R~~FLF~~~Li~cK~~~~~~~~~~~~~~y~~k~~~~~~~~-~v~~~~   88 (147)
T d1kz7a2          10 LGKLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAV-GITENV   88 (147)
T ss_dssp             GCCEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGE-EEECCB
T ss_pred             cCCEEEeeeEEEEecCccchhhhhhhhccCCceEEEEEecCcEEEEEecccCCcccccCceEEEeeEEecCCc-eeEecC
Confidence            455677888865311           1234588999999999999886430000      1122456666663 333322


Q ss_pred             ccCCCCceEEEE--eCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610           87 DVLNKPFAFEHS--RGGYTMYSVADTEKEKGERINSIGRAIVQH  128 (144)
Q Consensus        87 ~~~~~~~~f~I~--~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~  128 (144)
                      +  +..+.|.+.  .+...|.++|.|+++++.|+++|++++...
T Consensus        89 ~--~~~~~f~~~~~~~~~~~~l~a~s~eeK~~W~~~I~~~l~~q  130 (147)
T d1kz7a2          89 K--GDTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTSQ  130 (147)
T ss_dssp             T--TBTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             C--CCcceEEEEeCCCCcEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence            2  344566665  466789999999999999999999987543

>d1fhoa_ b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: UNC-89
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.00  E-value=4.4e-05  Score=48.08  Aligned_cols=101  Identities=6%  Similarity=-0.064  Sum_probs=69.3

Q ss_pred             eeecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCC-CCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC
Q 035610           22 EFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHN-ITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG  100 (144)
Q Consensus        22 ~~~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~-~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~  100 (144)
                      ....+.+..|++....+. +.-+.|+++|-+..|.|.+.... ..+...-++.|.|+.+ .+.+..   +....|.|...
T Consensus         5 ~~~G~ll~~~~f~v~~~~-~k~k~R~vFLF~~~ll~~K~~~~~~~~~y~~K~~i~l~~~-~v~e~~---gd~~~F~i~~~   79 (119)
T d1fhoa_           5 GKLGRIIRHDAFQVWEGD-EPPKLRYVFLFRNKIMFTEQDASTSPPSYTHYSSIRLDKY-NIRQHT---TDEDTIVLQPQ   79 (119)
T ss_dssp             CCCCCSSEEEEEEECSTT-CSCEEEEEEEETTEEEEEEECCSSSSCCCSSCCEEESSSC-EEEEEC---TTCCEEEEECC
T ss_pred             hhCCceEEEeEEEEEeCC-CCceEEEEEEEcCeEEEEEeccCCCCceEEEecEEECCce-EEEEcC---CCCcEEEEEeC
Confidence            345677788888887543 34567999999999999886541 1123446789999985 333221   34467888743


Q ss_pred             Ce-------EEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610          101 GY-------TMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       101 ~~-------~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      +.       .+-++|.|+++++.|+.+|.+++.+
T Consensus        80 ~~~~~~~~~~~~~~a~s~~~K~~Wv~~I~e~~~~  113 (119)
T d1fhoa_          80 EPGLPSFRIKPKDFETSEYVRKAWLRDIAEEQEK  113 (119)
T ss_dssp             STTCCCBCCCCCSSSSCSHHHHHHHHHHHTCCHH
T ss_pred             CCCCCcceEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence            21       3445689999999999999886544

>d2adza1 b.55.1.1 (A:1-43,A:117-178) Alpha-1-syntrophin {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Alpha-1-syntrophin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.86  E-value=0.00064  Score=40.85  Aligned_cols=93  Identities=11%  Similarity=0.045  Sum_probs=69.2

Q ss_pred             CCceEEEEEeeCC-----CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC
Q 035610           26 QPGAIGPANKQGD-----YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG  100 (144)
Q Consensus        26 ~~~~~G~L~k~~~-----~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~  100 (144)
                      ...+.|.|..+.+     +...|.+-..-|.+..|..--        ......|+|..|-..+.....-.....|+|.++
T Consensus         5 ra~rsGlLE~~~~~~~~~~~~rW~rVl~~L~ed~Lt~s~--------~~d~k~IPLKmcyvtR~~~~~D~EnR~lElhSp   76 (105)
T d2adza1           5 RAPRTGLLELRCGAGSGAGGERWQRVLLSLAEDALTVSP--------LSEAKHVSLKMAYVSRRCTPTDPEPRYLEICAA   76 (105)
T ss_dssp             CCCEEEEEEECCCCSSSSSCCCCEEEEEEEETTEEEEES--------SCSCEEEETTTCEEEEECCSSCCSSCEEEEEET
T ss_pred             cCCccceEEEeeccCCCccccceeeeeeecccceEEeec--------ccccceeeeeeEEeeecccCCCCcccEEEEECC
Confidence            4568999999832     345799988889999986532        224688999998765543322234477999987


Q ss_pred             Ce--EEEEEcCCHHHHHHHHHHHHHHHH
Q 035610          101 GY--TMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus       101 ~~--~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      ++  ..+|.|.+..+++.|.++|+..+.
T Consensus        77 DG~~t~iLR~kD~a~A~~WF~Aihs~i~  104 (105)
T d2adza1          77 DGQDAVFLRAKDEASARSWAGAIQAQIG  104 (105)
T ss_dssp             TTTEEEEECCSSHHHHHHHHHHHHHHHT
T ss_pred             CCCceEEEEcCCHHHHHHHHHHHHHhhc
Confidence            64  567889999999999999998773

>d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.019  Score=36.01  Aligned_cols=87  Identities=8%  Similarity=-0.051  Sum_probs=60.3

Q ss_pred             EeeCCCCCCceeEEEEEeC-CeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc--C-----------------CCCc
Q 035610           34 NKQGDYIKTWLRRWFILKQ-GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV--L-----------------NKPF   93 (144)
Q Consensus        34 ~k~~~~~~~w~~R~fvL~~-~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~--~-----------------~~~~   93 (144)
                      .|-......-+.++|.|.. +...|++++.      .....++|..+..|+.....  .                 ....
T Consensus        14 ~K~~~~~~~~~~~~frlD~~g~~L~W~~~~------k~~~~l~i~~I~evR~G~~~~~~k~~kl~~~~~~~~~~~~~e~~   87 (131)
T d2zkmx3          14 IKWDDETTVASPVILRVDPKGYYLYWTYQS------KEMEFLDITSIRDTRFGKFAKMPKSQKLRDVFNMDFPDNSFLLK   87 (131)
T ss_dssp             EEECTTTCCEEEEEEEECTTSCEEEEEETT------SCEEEEEGGGEEEEEEGGGSCCCCSHHHHHHTTCSSTTCCGGGT
T ss_pred             EEEcCCCCccceEEEEECCCCCEEEEECCC------CceeEEEecceeeEEeccccCCccHHHHhhhhhccCcCCCcccc
Confidence            3334344566778888875 4455566543      34568899998888765321  0                 1125


Q ss_pred             eEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610           94 AFEHSRGG-----YTMYSVADTEKEKGERINSIGRAIV  126 (144)
Q Consensus        94 ~f~I~~~~-----~~~~l~a~s~~e~~~Wi~al~~ai~  126 (144)
                      +|.|....     +.+.|.|.+.++++.|+..|+..+.
T Consensus        88 ~ftIvyg~~~v~l~~l~lVA~s~~~a~~W~~gL~~L~~  125 (131)
T d2zkmx3          88 TLTVVSGPDMVDLTFHNFVSYKENVGKAWAEDVLALVK  125 (131)
T ss_dssp             EEEEEECSSSSSCEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred             EEEEEECCCcccceEEEEEeCCHHHHHHHHHHHHHHHh
Confidence            99999642     6778999999999999999999764

>d1foea2 b.55.1.1 (A:1240-1401) GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.64  E-value=1.9  Score=27.31  Aligned_cols=83  Identities=13%  Similarity=0.125  Sum_probs=55.1

Q ss_pred             eeEEEEEeCCeEEEEecCCC-CCCC--------------CCcceEEeCCceEEEeeccc-cCCCCceEEEEe--------
Q 035610           44 LRRWFILKQGEHFWFKDSHN-ITRG--------------STPRGFIPVGTCLTVKCAED-VLNKPFAFEHSR--------   99 (144)
Q Consensus        44 ~~R~fvL~~~~l~y~k~~~~-~~~~--------------~~~~~~i~L~~~~~v~~~~~-~~~~~~~f~I~~--------   99 (144)
                      .---||.+.-.+..|+.... ..+.              ..-+.+|+++. ..|+.... .......++|+.        
T Consensus        51 el~~FVFK~AVV~vcke~sk~KkKl~~~~~~~~~~e~d~~rFr~mIP~~a-lQVR~~~~~~~es~~vwEiiH~kSe~egR  129 (162)
T d1foea2          51 ELAAFVFKTAVVLVYKDGSKQKKKLVGSHRLSIYEEWDPFRFRHMIPTEA-LQVRALPSADAEANAVCEIVHVKSESEGR  129 (162)
T ss_dssp             EEEEEEETTEEEEEECCCCCSCCSSCCCTTTTCSSCSCSCCCEEEEEGGG-EEEECCCCTTTTSCCEEEEEECCBTGGGB
T ss_pred             cEEEEEecceEEEEEcccchhhhhccCccccccccccCceeEEEEeeeee-eEeecccccCCCcceEEEEEeecccccCC
Confidence            33457888777777776431 0000              11234777777 55554432 245667888884        


Q ss_pred             CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610          100 GGYTMYSVADTEKEKGERINSIGRAIVQ  127 (144)
Q Consensus       100 ~~~~~~l~a~s~~e~~~Wi~al~~ai~~  127 (144)
                      +++.|.|++.+.+.+..-+.+|++.+..
T Consensus       130 pE~vfqlc~St~E~K~~flK~Ir~ilre  157 (162)
T d1foea2         130 PERVFHLCCSSPESRKDFLKSVHSILRD  157 (162)
T ss_dssp             CCEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred             cceEEEEecCCHHHHHHHHHHHHHHHHH
Confidence            3578999999999999999999998754