Citrus Sinensis ID: 035684

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------
Protein Sequence
MVNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK
Secondary Structure (PSIPRED)
ccccEEEEccccEEEEEEEccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEccccEEEEEEEEEccccccccccccccccc
Coil and Loop (DISEMBL)
MVNDTVIRRASRRVSFTfrkvregpcrckfpqycdsqk
Flexible Loop (DISEMBL)
mvndtvirrasrrvsftfrkvregpcrckfpqycdsqk
Low Complexity Region (SEG)
MVNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK
Disordered region (IsUnstruct)
************RVSFTFRKVREGPCRCKFPQY*****
Disordered Region (DISOPRED)
***D****RASRRVSFTFRKVREGPCRCKFPQYCD***
Disordered Region (DISEMBL)
MVNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK
Disordered Region (DISPRO)
**NDTVIRRASRRVSFTFRKVREGPCRCKFPQYC****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	38	2.2.26 [Sep-21-2011]
Q07G10	628	Alkylated DNA repair prot	yes	no	0.921	0.055	0.542	9e-06
A1A4L5	664	Alkylated DNA repair prot	yes	no	0.947	0.054	0.527	1e-05
Q95K79	664	Alkylated DNA repair prot	N/A	no	0.973	0.055	0.513	6e-05
Q96BT7	664	Alkylated DNA repair prot	yes	no	0.973	0.055	0.513	6e-05
Q80Y20	664	Alkylated DNA repair prot	yes	no	0.973	0.055	0.432	0.0005

>sp|Q07G10|ALKB8_XENTR Alkylated DNA repair protein alkB homolog 8 OS=Xenopus tropicalis GN=alkbh8 PE=2 SV=2

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/35 (54%), Positives = 23/35 (65%)

Query: 4   DTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
           +  + + S R SFTFRKVR  PC C FP  CDSQ+
Sbjct: 317 ELTLSKRSTRTSFTFRKVRHSPCDCAFPSECDSQQ 351

Catalyzes the methylation of 5-carboxymethyl uridine to 5-methylcarboxymethyl uridine at the wobble position of the anticodon loop in tRNA. Catalyzes the last step in the formation of 5-methylcarboxymethyl uridine at the wobble position of the anticodon loop in target tRNA. Has a preference for tRNA(Arg) and tRNA(Glu), and does not bind tRNA(Lys). Required for normal survival after DNA damage.
Xenopus tropicalis (taxid: 8364)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 2EC: 9

>sp|A1A4L5|ALKB8_BOVIN Alkylated DNA repair protein alkB homolog 8 OS=Bos taurus GN=ALKBH8 PE=2 SV=1

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/36 (52%), Positives = 23/36 (63%)

Query: 2   VNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQ 37
           V D  + +   R SFTFRKVR+ PC C +P  CDSQ
Sbjct: 317 VEDLTLNKRGIRTSFTFRKVRQTPCNCSYPLVCDSQ 352

Catalyzes the methylation of 5-carboxymethyl uridine to 5-methylcarboxymethyl uridine at the wobble position of the anticodon loop in tRNA. Catalyzes the last step in the formation of 5-methylcarboxymethyl uridine at the wobble position of the anticodon loop in target tRNA. Has a preference for tRNA(Arg) and tRNA(Glu), and does not bind tRNA(Lys). Required for normal survival after DNA damage. May inhibit apoptosis and promote cell survival and angiogenesis.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 9

>sp|Q95K79|ALKB8_MACFA Alkylated DNA repair protein alkB homolog 8 OS=Macaca fascicularis GN=ALKBH8 PE=2 SV=1

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 24/37 (64%)

Query: 2   VNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
           V D  + +   R SFTFRKVR+ PC C +P  CDSQ+
Sbjct: 317 VGDLTLSKRGLRTSFTFRKVRQTPCNCSYPLVCDSQR 353

Catalyzes the methylation of 5-carboxymethyl uridine to 5-methylcarboxymethyl uridine at the wobble position of the anticodon loop in tRNA. Catalyzes the last step in the formation of 5-methylcarboxymethyl uridine at the wobble position of the anticodon loop in target tRNA. Has a preference for tRNA(Arg) and tRNA(Glu), and does not bind tRNA(Lys). Required for normal survival after DNA damage. May inhibit apoptosis and promote cell survival and angiogenesis.

Macaca fascicularis (taxid: 9541)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 9

>sp|Q96BT7|ALKB8_HUMAN Alkylated DNA repair protein alkB homolog 8 OS=Homo sapiens GN=ALKBH8 PE=1 SV=2

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 24/37 (64%)

Query: 2   VNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
           V D  + +   R SFTFRKVR+ PC C +P  CDSQ+
Sbjct: 317 VGDLTLSKRGLRTSFTFRKVRQTPCNCSYPLVCDSQR 353

Catalyzes the methylation of 5-carboxymethyl uridine to 5-methylcarboxymethyl uridine at the wobble position of the anticodon loop in tRNA. Catalyzes the last step in the formation of 5-methylcarboxymethyl uridine at the wobble position of the anticodon loop in target tRNA. Has a preference for tRNA(Arg) and tRNA(Glu), and does not bind tRNA(Lys). Required for normal survival after DNA damage. May inhibit apoptosis and promote cell survival and angiogenesis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 9

>sp|Q80Y20|ALKB8_MOUSE Alkylated DNA repair protein alkB homolog 8 OS=Mus musculus GN=Alkbh8 PE=2 SV=1

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/37 (43%), Positives = 21/37 (56%)

Query: 2   VNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
           + D  + +   R SFTFRKVR  PC C +   CD Q+
Sbjct: 317 IGDLTLSKRGMRTSFTFRKVRRMPCNCSYSSVCDRQR 353


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.331    0.138    0.448 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,754,619
Number of Sequences: 539616
Number of extensions: 196163
Number of successful extensions: 346
Number of sequences better than 100.0: 5
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 341
Number of HSP's gapped (non-prelim): 5
length of query: 38
length of database: 191,569,459
effective HSP length: 12
effective length of query: 26
effective length of database: 185,094,067
effective search space: 4812445742
effective search space used: 4812445742
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 55 (25.8 bits)

Catalyzes the methylation of 5-carboxymethyl uridine to 5-methylcarboxymethyl uridine at the wobble position of the anticodon loop in tRNA. Catalyzes the last step in the formation of 5-methylcarboxymethyl uridine at the wobble position of the anticodon loop in target tRNA. Has a preference for tRNA(Arg) and tRNA(Glu), and does not bind tRNA(Lys). Required for normal survival after DNA damage. May inhibit apoptosis and promote cell survival and angiogenesis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	38
296085482	912	unnamed protein product [Vitis vinifera]	1.0	0.041	0.763	9e-11
225427651	349	PREDICTED: alkylated DNA repair protein	1.0	0.108	0.763	1e-10
224074611	344	predicted protein [Populus trichocarpa]	1.0	0.110	0.736	2e-10
356531539	342	PREDICTED: alkylated DNA repair protein	0.973	0.108	0.810	6e-10
30692572	431	RNA recognition motif-containing protein	0.973	0.085	0.756	1e-09
62319760	431	hypothetical protein [Arabidopsis thalia	0.973	0.085	0.756	1e-09
449455667	344	PREDICTED: alkylated DNA repair protein	1.0	0.110	0.736	1e-09
42571709	344	RNA recognition motif-containing protein	0.973	0.107	0.756	3e-09
357484481	344	Alkylated DNA repair protein alkB-like p	0.973	0.107	0.756	6e-08
297846510	344	oxidoreductase [Arabidopsis lyrata subsp	0.973	0.107	0.729	1e-07

>gi|296085482|emb|CBI29214.3| unnamed protein product [Vitis vinifera]

 Score = 70.9 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 29/38 (76%), Positives = 33/38 (86%)

Query: 1   MVNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
           MV D+VIRR  RRVSFTFRKVR GPC+C+FPQYCDS +
Sbjct: 875 MVKDSVIRRGPRRVSFTFRKVRTGPCQCEFPQYCDSPR 912

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427651|ref|XP_002270503.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like [Vitis vinifera]

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/38 (76%), Positives = 33/38 (86%)

Query: 1   MVNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
           MV D+VIRR  RRVSFTFRKVR GPC+C+FPQYCDS +
Sbjct: 312 MVKDSVIRRGPRRVSFTFRKVRTGPCQCEFPQYCDSPR 349

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224074611|ref|XP_002304398.1| predicted protein [Populus trichocarpa] gi|222841830|gb|EEE79377.1| predicted protein [Populus trichocarpa]

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/38 (73%), Positives = 34/38 (89%)

Query: 1   MVNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
           MVN +VIRR +RRVSFTFRKV  GPC+C+FPQYCDS++
Sbjct: 307 MVNQSVIRRGARRVSFTFRKVLRGPCQCEFPQYCDSER 344

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531539|ref|XP_003534335.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like [Glycine max]

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/37 (81%), Positives = 34/37 (91%)

Query: 2   VNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
           VN  VIRRASRRVSFTFRKVREG C+C+FPQYCDS++
Sbjct: 306 VNGKVIRRASRRVSFTFRKVREGLCKCEFPQYCDSRR 342

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30692572|ref|NP_174442.2| RNA recognition motif-containing protein [Arabidopsis thaliana] gi|42571711|ref|NP_973946.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gi|20259468|gb|AAM13854.1| unknown protein [Arabidopsis thaliana] gi|22136680|gb|AAM91659.1| unknown protein [Arabidopsis thaliana] gi|332193253|gb|AEE31374.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gi|332193255|gb|AEE31376.1| RNA recognition motif-containing protein [Arabidopsis thaliana]

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/37 (75%), Positives = 31/37 (83%)

Query: 2   VNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
           V D VIRR+SRRVSFT RKVR  PC CK+PQYCDSQ+
Sbjct: 393 VKDKVIRRSSRRVSFTLRKVRNHPCSCKYPQYCDSQQ 429

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|62319760|dbj|BAD93744.1| hypothetical protein [Arabidopsis thaliana]

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/37 (75%), Positives = 31/37 (83%)

Query: 2   VNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
           V D VIRR+SRRVSFT RKVR  PC CK+PQYCDSQ+
Sbjct: 393 VKDKVIRRSSRRVSFTLRKVRNHPCSCKYPQYCDSQQ 429

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455667|ref|XP_004145573.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like [Cucumis sativus] gi|449523025|ref|XP_004168525.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like [Cucumis sativus]

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/38 (73%), Positives = 31/38 (81%)

Query: 1   MVNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
           MV D+ IRR  RRVSFTFRKVR  PC+CKFP YCDSQ+
Sbjct: 307 MVKDSSIRRGRRRVSFTFRKVRTDPCQCKFPHYCDSQR 344

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42571709|ref|NP_973945.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gi|332193254|gb|AEE31375.1| RNA recognition motif-containing protein [Arabidopsis thaliana]

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/37 (75%), Positives = 31/37 (83%)

Query: 2   VNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
           V D VIRR+SRRVSFT RKVR  PC CK+PQYCDSQ+
Sbjct: 306 VKDKVIRRSSRRVSFTLRKVRNHPCSCKYPQYCDSQQ 342

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357484481|ref|XP_003612528.1| Alkylated DNA repair protein alkB-like protein [Medicago truncatula] gi|355513863|gb|AES95486.1| Alkylated DNA repair protein alkB-like protein [Medicago truncatula]

 Score = 61.6 bits (148), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 28/37 (75%), Positives = 32/37 (86%)

Query: 2   VNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
           V+  VIRRASRRVSFT RKVR G C+C+FPQYCDSQ+
Sbjct: 308 VDGKVIRRASRRVSFTLRKVRAGLCKCEFPQYCDSQR 344

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297846510|ref|XP_002891136.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] gi|297336978|gb|EFH67395.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/37 (72%), Positives = 31/37 (83%)

Query: 2   VNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
           V +  IRR+SRRVSFT RKVR  PCRCK+PQYCDSQ+
Sbjct: 306 VKEKAIRRSSRRVSFTLRKVRNLPCRCKYPQYCDSQQ 342

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	38
TAIR|locus:2028631	431	TRM9 "tRNA methyltransferase 9	0.973	0.085	0.756	2.4e-10
UNIPROTKB|F1P0F6	673	ALKBH8 "Uncharacterized protei	0.973	0.054	0.540	1.2e-05
UNIPROTKB|Q96BT7	664	ALKBH8 "Alkylated DNA repair p	0.973	0.055	0.513	1.5e-05
UNIPROTKB|Q95K79	664	ALKBH8 "Alkylated DNA repair p	0.973	0.055	0.513	1.5e-05
UNIPROTKB|E2REE7	674	ALKBH8 "Uncharacterized protei	0.947	0.053	0.527	2e-05
UNIPROTKB|A1A4L5	664	ALKBH8 "Alkylated DNA repair p	0.947	0.054	0.527	2.5e-05
UNIPROTKB|I3LA93	665	ALKBH8 "Uncharacterized protei	0.947	0.054	0.527	2.5e-05
ZFIN|ZDB-GENE-100922-251	666	alkbh8 "alkB, alkylation repai	0.921	0.052	0.527	0.00023
MGI|MGI:1914917	664	Alkbh8 "alkB, alkylation repai	0.973	0.055	0.432	0.00048
RGD|1304687	629	Alkbh8 "alkB, alkylation repai	0.973	0.058	0.432	0.00058

TAIR|locus:2028631 TRM9 "tRNA methyltransferase 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 2.4e-10, P = 2.4e-10
 Identities = 28/37 (75%), Positives = 31/37 (83%)

Query:     2 VNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
             V D VIRR+SRRVSFT RKVR  PC CK+PQYCDSQ+
Sbjct:   393 VKDKVIRRSSRRVSFTLRKVRNHPCSCKYPQYCDSQQ 429

GO:0003676 "nucleic acid binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0002098 "tRNA wobble uridine modification" evidence=IMP

UNIPROTKB|F1P0F6 ALKBH8 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 113 (44.8 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 20/37 (54%), Positives = 23/37 (62%)

Query:     2 VNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
             V D  ++R   R SFTFRKVR   C C +P  CDSQK
Sbjct:   320 VRDLTLKRRETRTSFTFRKVRRSSCNCIYPSVCDSQK 356

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0016300 "tRNA (uracil) methyltransferase activity" evidence=IEA

UNIPROTKB|Q96BT7 ALKBH8 "Alkylated DNA repair protein alkB homolog 8" [Homo sapiens (taxid:9606)]

 Score = 112 (44.5 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 19/37 (51%), Positives = 24/37 (64%)

Query:     2 VNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
             V D  + +   R SFTFRKVR+ PC C +P  CDSQ+
Sbjct:   317 VGDLTLSKRGLRTSFTFRKVRQTPCNCSYPLVCDSQR 353

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0016300 "tRNA (uracil) methyltransferase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005829 "cytosol" evidence=IDA

GO:0006974 "response to DNA damage stimulus" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0030488 "tRNA methylation" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0015630 "microtubule cytoskeleton" evidence=IDA

UNIPROTKB|Q95K79 ALKBH8 "Alkylated DNA repair protein alkB homolog 8" [Macaca fascicularis (taxid:9541)]

 Score = 112 (44.5 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 19/37 (51%), Positives = 24/37 (64%)

Query:     2 VNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
             V D  + +   R SFTFRKVR+ PC C +P  CDSQ+
Sbjct:   317 VGDLTLSKRGLRTSFTFRKVRQTPCNCSYPLVCDSQR 353

GO:0005634 "nucleus" evidence=ISS

GO:0005829 "cytosol" evidence=ISS

GO:0006974 "response to DNA damage stimulus" evidence=ISS

GO:0016300 "tRNA (uracil) methyltransferase activity" evidence=ISS

GO:0030488 "tRNA methylation" evidence=ISS

UNIPROTKB|E2REE7 ALKBH8 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 111 (44.1 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 19/36 (52%), Positives = 23/36 (63%)

Query:     2 VNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQ 37
             V D  + +   R SFTFRKVR+ PC C +P  CDSQ
Sbjct:   330 VGDLTLSKRGMRTSFTFRKVRQTPCNCSYPLVCDSQ 365

GO:0016300 "tRNA (uracil) methyltransferase activity" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|A1A4L5 ALKBH8 "Alkylated DNA repair protein alkB homolog 8" [Bos taurus (taxid:9913)]

 Score = 110 (43.8 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 19/36 (52%), Positives = 23/36 (63%)

Query:     2 VNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQ 37
             V D  + +   R SFTFRKVR+ PC C +P  CDSQ
Sbjct:   317 VEDLTLNKRGIRTSFTFRKVRQTPCNCSYPLVCDSQ 352

GO:0016300 "tRNA (uracil) methyltransferase activity" evidence=ISS

GO:0030488 "tRNA methylation" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0006974 "response to DNA damage stimulus" evidence=ISS

GO:0005829 "cytosol" evidence=ISS

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|I3LA93 ALKBH8 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 110 (43.8 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 19/36 (52%), Positives = 23/36 (63%)

Query:     2 VNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQ 37
             V D  + +   R SFTFRKVR+ PC C +P  CDSQ
Sbjct:   317 VEDLTLNKRGIRTSFTFRKVRQTPCNCSYPLVCDSQ 352

GO:0016300 "tRNA (uracil) methyltransferase activity" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

ZFIN|ZDB-GENE-100922-251 alkbh8 "alkB, alkylation repair homolog 8 (E. coli)" [Danio rerio (taxid:7955)]

 Score = 101 (40.6 bits), Expect = 0.00023, P = 0.00023
 Identities = 19/36 (52%), Positives = 24/36 (66%)

Query:     3 NDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
             N T+ RR +R  S TFRK+R  PC C +P  CDSQ+
Sbjct:   316 NLTLSRRDTR-TSLTFRKIRHTPCNCAYPSVCDSQR 350

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

MGI|MGI:1914917 Alkbh8 "alkB, alkylation repair homolog 8 (E. coli)" [Mus musculus (taxid:10090)]

 Score = 98 (39.6 bits), Expect = 0.00048, P = 0.00048
 Identities = 16/37 (43%), Positives = 21/37 (56%)

Query:     2 VNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
             + D  + +   R SFTFRKVR  PC C +   CD Q+
Sbjct:   317 IGDLTLSKRGMRTSFTFRKVRRMPCNCSYSSVCDRQR 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005829 "cytosol" evidence=ISO

GO:0006974 "response to DNA damage stimulus" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0016300 "tRNA (uracil) methyltransferase activity" evidence=ISO

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0030488 "tRNA methylation" evidence=ISO

GO:0032259 "methylation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

RGD|1304687 Alkbh8 "alkB, alkylation repair homolog 8 (E. coli)" [Rattus norvegicus (taxid:10116)]

 Score = 97 (39.2 bits), Expect = 0.00058, P = 0.00058
 Identities = 16/37 (43%), Positives = 21/37 (56%)

Query:     2 VNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
             + D  + +   R SFTFRKVR  PC C +   CD Q+
Sbjct:   282 IGDLTLSKRGMRTSFTFRKVRRIPCNCSYSSVCDRQR 318

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=ISO

GO:0006974 "response to DNA damage stimulus" evidence=ISO

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=ISO

GO:0016300 "tRNA (uracil) methyltransferase activity" evidence=ISO

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0030488 "tRNA methylation" evidence=ISO

GO:0005730 "nucleolus" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00001208001	SubName- Full=Chromosome chr2 scaffold_113, whole genome shotgun sequence; (347 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00015288001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (347 aa)		•					•		0.631
	GSVIVG00010954001	SubName- Full=Chromosome undetermined scaffold_296, whole genome shotgun sequence; (233 aa)							•		0.430

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	38
KOG4176	323	consensus Uncharacterized conserved protein [Funct	97.64
PF13532	194	2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily;	95.04
PRK15401	213	alpha-ketoglutarate-dependent dioxygenase AlkB; Pr	92.56
KOG3200	224	consensus Uncharacterized conserved protein [Funct	86.54

>KOG4176 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.64  E-value=4.1e-05  Score=51.54  Aligned_cols=24  Identities=46%  Similarity=0.982  Sum_probs=22.7

Q ss_pred             cCCCeEEEEEEeeecCceecCCcc
Q 035684            9 RASRRVSFTFRKVREGPCRCKFPQ   32 (38)
Q Consensus         9 ~R~~R~S~TfRkvR~~~C~C~~~~   32 (38)
                      .|..|+|+||||+|..+|.|+++.
T Consensus       292 ~~~kRisitfrki~~~~~~~~~~~  315 (323)
T KOG4176|consen  292 SRNKRISITFRKIRPDPCFCEPPP  315 (323)
T ss_pred             CCCceEEEEEEEeccCCCCCCCCC
Confidence            689999999999999999999985

>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A

Probab=95.04  E-value=0.018  Score=33.60  Aligned_cols=12  Identities=50%  Similarity=0.747  Sum_probs=8.8

Q ss_pred             EcCCCeEEEEEE
Q 035684            8 RRASRRVSFTFR   19 (38)
Q Consensus         8 ~~R~~R~S~TfR   19 (38)
                      ..++.|+|||||
T Consensus       183 ~~~~~RislTfR  194 (194)
T PF13532_consen  183 YVRGRRISLTFR  194 (194)
T ss_dssp             EE-S-EEEEEEE
T ss_pred             cCCCCEEEEEeC
Confidence            468899999998

...

>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional

Probab=92.56  E-value=0.084  Score=33.77  Aligned_cols=11  Identities=45%  Similarity=0.794  Sum_probs=9.5

Q ss_pred             CCeEEEEEEee
Q 035684           11 SRRVSFTFRKV   21 (38)
Q Consensus        11 ~~R~S~TfRkv   21 (38)
                      +.|+|||||++
T Consensus       203 ~~RINLTFR~~  213 (213)
T PRK15401        203 ECRINLTFRKA  213 (213)
T ss_pred             CCeEEEEeEcC
Confidence            47999999985

>KOG3200 consensus Uncharacterized conserved protein [Function unknown]

Probab=86.54  E-value=0.66  Score=30.62  Aligned_cols=14  Identities=43%  Similarity=0.437  Sum_probs=11.7

Q ss_pred             cCCCeEEEEEEeee
Q 035684            9 RASRRVSFTFRKVR   22 (38)
Q Consensus         9 ~R~~R~S~TfRkvR   22 (38)
                      -|+.|||||+|.|-
T Consensus       202 vr~tRvSLTiR~VP  215 (224)
T KOG3200|consen  202 VRQTRVSLTIRLVP  215 (224)
T ss_pred             eecceeEEEEecch
Confidence            34999999999873

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	38
3tht_A	345	Crystal Structure And Rna Binding Properties Of The		5e-07
3thp_A	345	Crystal Structure And Rna Binding Properties Of The		6e-07

>pdb|3THT|A Chain A, Crystal Structure And Rna Binding Properties Of The RrmALKB DOMAINS In Human Abh8, An Enzyme Catalyzing Trna Hypermodification, Northeast Structural Genomics Consortium Target Hr5601b Length = 345

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 2   VNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
           V D  + +   R SFTFRKVR+ PC C +P  CDSQ+
Sbjct: 293 VGDLTLSKRGLRTSFTFRKVRQTPCNCSYPLVCDSQR 329

>pdb|3THP|A Chain A, Crystal Structure And Rna Binding Properties Of The RrmALKB DOMAINS In Human Abh8, An Enzyme Catalyzing Trna Hypermodification, Northeast Structural Genomics Consortium Target Hr5601b Length = 345

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 2   VNDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
           V D  + +   R SFTFRKVR+ PC C +P  CDSQ+
Sbjct: 293 VGDLTLSKRGLRTSFTFRKVRQTPCNCSYPLVCDSQR 329
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	38
3tht_A	345	Alkylated DNA repair protein ALKB homolog 8; struc	7e-12

>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A* Length = 345

 Score = 55.9 bits (134), Expect = 7e-12
 Identities = 18/35 (51%), Positives = 23/35 (65%)

Query: 4   DTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK 38
           D  + +   R SFTFRKVR+ PC C +P  CDSQ+
Sbjct: 295 DLTLSKRGLRTSFTFRKVRQTPCNCSYPLVCDSQR 329

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	38
3tht_A	345	Alkylated DNA repair protein ALKB homolog 8; struc	99.64
3i3q_A	211	Alpha-ketoglutarate-dependent dioxygenase ALKB; be	96.15
2iuw_A	238	Alkylated repair protein ALKB homolog 3; oxidoredu	96.09
3s57_A	204	Alpha-ketoglutarate-dependent dioxygenase ALKB HO;	95.45

>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*

Probab=99.64  E-value=1.7e-16  Score=103.68  Aligned_cols=36  Identities=50%  Similarity=1.031  Sum_probs=33.4

Q ss_pred             CCeeEEcCCCeEEEEEEeeecCceecCCccccccCC
Q 035684            3 NDTVIRRASRRVSFTFRKVREGPCRCKFPQYCDSQK   38 (38)
Q Consensus         3 ~~~t~~~R~~R~S~TfRkvR~~~C~C~~~~~CDs~~   38 (38)
                      ++.++++|+.|||||||+||++||+|+||++||||+
T Consensus       294 ~~~~~~~r~~RiSlT~R~v~~~~c~C~~~~~cd~~~  329 (345)
T 3tht_A          294 GDLTLSKRGLRTSFTFRKVRQTPCNCSYPLVCDSQR  329 (345)
T ss_dssp             SCEEEEECCCEEEEEEECBCSSCCCCSCTTTCTTTT
T ss_pred             CCceeccCCCEEEEEEEecCCCCcCCCCCCcccCCC
Confidence            346899999999999999999999999999999985

>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...

Probab=96.15  E-value=0.0024  Score=39.11  Aligned_cols=16  Identities=25%  Similarity=0.385  Sum_probs=12.9

Q ss_pred             CCCeEEEEEEeeecCc
Q 035684           10 ASRRVSFTFRKVREGP   25 (38)
Q Consensus        10 R~~R~S~TfRkvR~~~   25 (38)
                      ++.|+|||||+++.++
T Consensus       191 ~~~RIsLTFR~~~~~~  206 (211)
T 3i3q_A          191 IDCRYNLTFRQAGKKE  206 (211)
T ss_dssp             BTCEEEEEEECCSCC-
T ss_pred             CCCEEEEEeeeccCCc
Confidence            5679999999998654

>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10

Probab=96.09  E-value=0.0027  Score=38.93  Aligned_cols=16  Identities=38%  Similarity=0.522  Sum_probs=13.2

Q ss_pred             cCCCeEEEEEEeeecC
Q 035684            9 RASRRVSFTFRKVREG   24 (38)
Q Consensus         9 ~R~~R~S~TfRkvR~~   24 (38)
                      .++.|+|||||+|..+
T Consensus       217 ~~~~RIsLTfR~v~~~  232 (238)
T 2iuw_A          217 SREPRVNLTFRTVYPD  232 (238)
T ss_dssp             CCCCEEEEEEECCCC-
T ss_pred             CCCCEEEEEeeecccc
Confidence            3789999999999764

>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*

Probab=95.45  E-value=0.0072  Score=36.36  Aligned_cols=12  Identities=50%  Similarity=0.847  Sum_probs=10.7

Q ss_pred             CCCeEEEEEEee
Q 035684           10 ASRRVSFTFRKV   21 (38)
Q Consensus        10 R~~R~S~TfRkv   21 (38)
                      ++.|+|||||+|
T Consensus       191 ~~~RislTFR~i  202 (204)
T 3s57_A          191 LAPRVNLTFRKI  202 (204)
T ss_dssp             CSCEEEEEEECB
T ss_pred             CCCEEEEEeeee
Confidence            478999999997

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	38
d2iuwa1	210	AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]	96.8
d2fdia1	200	Alkylated DNA repair protein AlkB {Escherichia col	95.42

>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: AlkB-like
domain: AlkB homolog 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.80  E-value=0.00026  Score=39.89  Aligned_cols=13  Identities=46%  Similarity=0.657  Sum_probs=11.3

Q ss_pred             CCCeEEEEEEeee
Q 035684           10 ASRRVSFTFRKVR   22 (38)
Q Consensus        10 R~~R~S~TfRkvR   22 (38)
                      ++.|||||||+|+
T Consensus       197 ~~~RiSlTfR~v~  209 (210)
T d2iuwa1         197 REPRVNLTFRTVY  209 (210)
T ss_dssp             CCCEEEEEEECCC
T ss_pred             CCCeEEEEEEeec
Confidence            4679999999985

>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: AlkB-like
domain: Alkylated DNA repair protein AlkB
species: Escherichia coli [TaxId: 562]

Probab=95.42  E-value=0.0033  Score=36.49  Aligned_cols=14  Identities=29%  Similarity=0.444  Sum_probs=11.5

Q ss_pred             cCCCeEEEEEEeee
Q 035684            9 RASRRVSFTFRKVR   22 (38)
Q Consensus         9 ~R~~R~S~TfRkvR   22 (38)
                      .++.|||||||++.
T Consensus       186 ~~~~RislTfR~~g  199 (200)
T d2fdia1         186 TIDCRYNLTFRQAG  199 (200)
T ss_dssp             TBTCEEEEEEECCC
T ss_pred             CCCCeEEEEEEecC
Confidence            45779999999974