Citrus Sinensis ID: 035757

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------
Protein Sequence
MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEGTEGLDKET
Secondary Structure (PSIPRED)
cEEEEEEccEEccccccccccccHHHHHHHHHHHHHHccccccccEEEEEcHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEcccEEcccccccccccHHHHHHHHHHHHHHcccccccccEEEEcHHHHHHcccHHHHHHcc
Coil and Loop (DISEMBL)
MAYMFVhdglvhrrfpvgpiahvpyLRKVAAAHQLhhsekfnglpyglflgpqeleevegtegldket
Flexible Loop (DISEMBL)
MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQEleevegtegldket
Low Complexity Region (SEG)
MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEGTEGLDKET
Disordered region (IsUnstruct)
**YMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLG*****************
Disordered Region (DISOPRED)
MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEE***********
Disordered Region (DISEMBL)
MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELE************
Disordered Region (DISPRO)
MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEGTEG*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEGTEGLDKET
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	68	2.2.26 [Sep-21-2011]
Q9SZZ8	310	Beta-carotene 3-hydroxyla	yes	no	0.985	0.216	0.850	2e-28
B3SGL0	320	Beta-carotene 3-hydroxyla	N/A	no	0.985	0.209	0.791	6e-26
O49815	315	Beta-carotene hydroxylase	N/A	no	1.0	0.215	0.779	9e-26
Q9LTG0	303	Beta-carotene 3-hydroxyla	no	no	0.985	0.221	0.820	3e-23
O49814	316	Beta-carotene hydroxylase	N/A	no	0.779	0.167	0.886	6e-23
Q9SPK6	322	Beta-carotene 3-hydroxyla	N/A	no	0.897	0.189	0.672	2e-20

>sp|Q9SZZ8|BCH1_ARATH Beta-carotene 3-hydroxylase 1, chloroplastic OS=Arabidopsis thaliana GN=BETA-OHASE 1 PE=1 SV=1

 Score =  124 bits (311), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 57/67 (85%), Positives = 63/67 (94%)

Query: 1   MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
           +AYMFVHDGLVH+RFPVGPIA VPYLRKVAAAHQLHH++KFNG+PYGLFLGP+ELEEV G
Sbjct: 224 IAYMFVHDGLVHKRFPVGPIADVPYLRKVAAAHQLHHTDKFNGVPYGLFLGPKELEEVGG 283

Query: 61  TEGLDKE 67
            E LDKE
Sbjct: 284 NEELDKE 290

Nonheme diiron monooxygenase involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylations of beta-carotene. Has also a low activity toward the beta- and epsilon-rings of alpha-carotene. No activity with acyclic carotenoids such as lycopene and neurosporene. Uses ferredoxin as an electron donor.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 3EC: .EC: 1EC: 2EC: 9

>sp|B3SGL0|BCH_GENLU Beta-carotene 3-hydroxylase, chloroplastic OS=Gentiana lutea GN=BHY PE=2 SV=1

 Score =  115 bits (289), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 53/67 (79%), Positives = 60/67 (89%)

Query: 1   MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
           MAYMFVHDGLVH+RFPVGPIA VPY R+VAAAH LHHS+KFNG+PYGLFLGP+ELEEV G
Sbjct: 244 MAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHTLHHSDKFNGVPYGLFLGPKELEEVGG 303

Query: 61  TEGLDKE 67
            + L+ E
Sbjct: 304 LQVLEME 310

Nonheme diiron monooxygenase involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylations of beta-carotene. Uses ferredoxin as an electron donor.

Gentiana lutea (taxid: 38851)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 2

EC: 9

>sp|O49815|BCH1_CAPAN Beta-carotene hydroxylase 1, chloroplastic OS=Capsicum annuum GN=CA1 PE=1 SV=1

 Score =  115 bits (288), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 53/68 (77%), Positives = 61/68 (89%)

Query: 1   MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
           MAYMFVHDGLVH+RFPVGPIA VPY ++VAAAHQLHHS+KF+G+PYGLFLGP+ELEEV  
Sbjct: 238 MAYMFVHDGLVHKRFPVGPIAKVPYFQRVAAAHQLHHSDKFDGVPYGLFLGPKELEEVGV 297

Query: 61  TEGLDKET 68
            E L+KE 
Sbjct: 298 IEELEKEV 305

Nonheme diiron monooxygenase involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylations of beta-carotene. Produces beta-cryptoxanthin and zeaxanthin. Uses ferredoxin as an electron donor.

Capsicum annuum (taxid: 4072)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 2

EC: 9

>sp|Q9LTG0|BCH2_ARATH Beta-carotene 3-hydroxylase 2, chloroplastic OS=Arabidopsis thaliana GN=BETA-OHASE 2 PE=2 SV=1

 Score =  107 bits (266), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/67 (82%), Positives = 63/67 (94%)

Query: 1   MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
           MAYMFVHDGLVH+RFPVGPIA+VPYLRKVAAAHQLHH++KF G+PYGLFLGP+E+EEV G
Sbjct: 222 MAYMFVHDGLVHKRFPVGPIANVPYLRKVAAAHQLHHTDKFKGVPYGLFLGPKEVEEVGG 281

Query: 61  TEGLDKE 67
            E L+KE
Sbjct: 282 KEELEKE 288

Nonheme diiron monooxygenase involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylations of beta-carotene. Has also a low activity toward the beta- and epsilon-rings of alpha-carotene. No activity with acyclic carotenoids such as lycopene and neurosporene. Uses ferredoxin as an electron donor.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 2

EC: 9

>sp|O49814|BCH2_CAPAN Beta-carotene hydroxylase 2, chloroplastic (Fragment) OS=Capsicum annuum GN=CA2 PE=2 SV=1

 Score =  105 bits (263), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 47/53 (88%), Positives = 52/53 (98%)

Query: 1   MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQ 53
           MAYMFVHDGLVH+RFPVGP+A+VPYLRKVAAAH LHHSEKFNG+PYGLFLGP+
Sbjct: 239 MAYMFVHDGLVHKRFPVGPVANVPYLRKVAAAHSLHHSEKFNGVPYGLFLGPK 291

Nonheme diiron monooxygenase involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylations of beta-carotene. Produces beta-cryptoxanthin and zeaxanthin. Uses ferredoxin as an electron donor.

Capsicum annuum (taxid: 4072)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 2

EC: 9

>sp|Q9SPK6|BCH_HAEPL Beta-carotene 3-hydroxylase, chloroplastic (Fragment) OS=Haematococcus pluvialis GN=CRTZ PE=2 SV=1

 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 41/61 (67%), Positives = 51/61 (83%)

Query: 1   MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
           MAYMFVHDGLVHRRFP GPIA +PY++++  AHQLHHS K+ G P+G+FLGPQEL+ + G
Sbjct: 246 MAYMFVHDGLVHRRFPTGPIAGLPYMKRLTVAHQLHHSGKYGGAPWGMFLGPQELQHIPG 305

Query: 61  T 61
            
Sbjct: 306 A 306

Nonheme diiron monooxygenase involved in the biosynthesis of astaxanthin. Hydroxylates beta-ring of beta-carotene and catalyzes the conversion of canthaxanthin to astaxanthin. Uses ferredoxin as an electron donor.

Haematococcus pluvialis (taxid: 44745)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 2

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	68
9971820	309	beta hydroxylase [Tagetes erecta]	0.985	0.216	0.880	3e-27
21734857	299	beta-carotene hydroxylase [Vitis vinifer	0.985	0.224	0.865	3e-27
399158077	299	beta-carotene hydroxylase 1 [Vitis vinif	0.985	0.224	0.865	4e-27
225426172	299	PREDICTED: beta-carotene 3-hydroxylase 1	0.985	0.224	0.865	4e-27
1575296	294	beta-carotene hydroxylase, partial [Arab	0.985	0.227	0.850	7e-27
15235959	310	beta-carotene hydroxylase [Arabidopsis t	0.985	0.216	0.850	7e-27
297799426	305	beta-carotene hydroxylase [Arabidopsis l	0.985	0.219	0.850	7e-27
79155071	303	putative beta-ring carotene hydroxylase	0.985	0.221	0.850	7e-27
392612223	309	beta-carotene hydroxylase [Nicotiana tab	1.0	0.220	0.838	1e-26
350538547	309	beta-carotene hydroxylase [Solanum lycop	1.0	0.220	0.838	1e-26

>gi|9971820|gb|AAG10430.1| beta hydroxylase [Tagetes erecta]

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/67 (88%), Positives = 64/67 (95%)

Query: 1   MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
           MAYMFVHDGLVHRRF VGPIA+VPYLR+VAAAHQLHH+EKFNG+PYGLFLGP+ELEEV G
Sbjct: 231 MAYMFVHDGLVHRRFQVGPIANVPYLRRVAAAHQLHHTEKFNGVPYGLFLGPKELEEVGG 290

Query: 61  TEGLDKE 67
           TE LDKE
Sbjct: 291 TEELDKE 297

Source: Tagetes erecta

Species: Tagetes erecta

Genus: Tagetes

Family: Asteraceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21734857|gb|AAM77007.1|AF499108_1 beta-carotene hydroxylase [Vitis vinifera]

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 58/67 (86%), Positives = 63/67 (94%)

Query: 1   MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
           MAYMFVHDGLVHRRFPVGPIA+VPYLRKVA+AHQLHHS+KFNG+PYGLFLGP ELEEV G
Sbjct: 222 MAYMFVHDGLVHRRFPVGPIANVPYLRKVASAHQLHHSDKFNGVPYGLFLGPMELEEVGG 281

Query: 61  TEGLDKE 67
            E L+KE
Sbjct: 282 MEELEKE 288

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|399158077|gb|AFP28800.1| beta-carotene hydroxylase 1 [Vitis vinifera]

 Score =  125 bits (314), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 58/67 (86%), Positives = 63/67 (94%)

Query: 1   MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
           MAYMFVHDGLVHRRFPVGPIA+VPYLRKVA+AHQLHHS+KFNG+PYGLFLGP ELEEV G
Sbjct: 222 MAYMFVHDGLVHRRFPVGPIANVPYLRKVASAHQLHHSDKFNGVPYGLFLGPMELEEVGG 281

Query: 61  TEGLDKE 67
            E L+KE
Sbjct: 282 MEELEKE 288

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426172|ref|XP_002279004.1| PREDICTED: beta-carotene 3-hydroxylase 1, chloroplastic [Vitis vinifera] gi|297742228|emb|CBI34377.3| unnamed protein product [Vitis vinifera]

 Score =  125 bits (314), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 58/67 (86%), Positives = 63/67 (94%)

Query: 1   MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
           MAYMFVHDGLVHRRFPVGPIA+VPYLRKVA+AHQLHHS+KFNG+PYGLFLGP ELEEV G
Sbjct: 222 MAYMFVHDGLVHRRFPVGPIANVPYLRKVASAHQLHHSDKFNGVPYGLFLGPMELEEVGG 281

Query: 61  TEGLDKE 67
            E L+KE
Sbjct: 282 MEELEKE 288

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1575296|gb|AAC49443.1| beta-carotene hydroxylase, partial [Arabidopsis thaliana]

 Score =  124 bits (311), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 57/67 (85%), Positives = 63/67 (94%)

Query: 1   MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
           +AYMFVHDGLVH+RFPVGPIA VPYLRKVAAAHQLHH++KFNG+PYGLFLGP+ELEEV G
Sbjct: 208 IAYMFVHDGLVHKRFPVGPIADVPYLRKVAAAHQLHHTDKFNGVPYGLFLGPKELEEVGG 267

Query: 61  TEGLDKE 67
            E LDKE
Sbjct: 268 NEELDKE 274

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235959|ref|NP_194300.1| beta-carotene hydroxylase [Arabidopsis thaliana] gi|75266785|sp|Q9SZZ8.1|BCH1_ARATH RecName: Full=Beta-carotene 3-hydroxylase 1, chloroplastic; Short=AtB1; Flags: Precursor gi|9230270|gb|AAF85797.1|AF125576_1 beta-carotene hydroxylase [Arabidopsis thaliana] gi|9230272|gb|AAF85798.1|AF125577_1 beta-carotene hydroxylase [Arabidopsis thaliana] gi|13877915|gb|AAK44035.1|AF370220_1 putative beta-carotene hydroxylase [Arabidopsis thaliana] gi|4914462|emb|CAB43701.1| beta-carotene hydroxylase [Arabidopsis thaliana] gi|7269420|emb|CAB81380.1| beta-carotene hydroxylase [Arabidopsis thaliana] gi|21280903|gb|AAM44971.1| putative beta-carotene hydroxylase [Arabidopsis thaliana] gi|332659698|gb|AEE85098.1| beta-carotene hydroxylase [Arabidopsis thaliana]

 Score =  124 bits (311), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 57/67 (85%), Positives = 63/67 (94%)

Query: 1   MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
           +AYMFVHDGLVH+RFPVGPIA VPYLRKVAAAHQLHH++KFNG+PYGLFLGP+ELEEV G
Sbjct: 224 IAYMFVHDGLVHKRFPVGPIADVPYLRKVAAAHQLHHTDKFNGVPYGLFLGPKELEEVGG 283

Query: 61  TEGLDKE 67
            E LDKE
Sbjct: 284 NEELDKE 290

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297799426|ref|XP_002867597.1| beta-carotene hydroxylase [Arabidopsis lyrata subsp. lyrata] gi|297313433|gb|EFH43856.1| beta-carotene hydroxylase [Arabidopsis lyrata subsp. lyrata]

 Score =  124 bits (311), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 57/67 (85%), Positives = 63/67 (94%)

Query: 1   MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
           +AYMFVHDGLVH+RFPVGPIA VPYLRKVAAAHQLHH++KFNG+PYGLFLGP+ELEEV G
Sbjct: 221 IAYMFVHDGLVHKRFPVGPIADVPYLRKVAAAHQLHHTDKFNGVPYGLFLGPKELEEVGG 280

Query: 61  TEGLDKE 67
            E LDKE
Sbjct: 281 NEELDKE 287

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79155071|gb|ABB52075.1| putative beta-ring carotene hydroxylase [Daucus carota subsp. sativus]

 Score =  124 bits (311), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 57/67 (85%), Positives = 63/67 (94%)

Query: 1   MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
           MAYMFVHDGLVH+RFPVGP+A+VPYLRKVAAAHQLHH EKFNG+PYGLFLGPQELE+V G
Sbjct: 228 MAYMFVHDGLVHKRFPVGPVANVPYLRKVAAAHQLHHMEKFNGVPYGLFLGPQELEQVGG 287

Query: 61  TEGLDKE 67
            E L+KE
Sbjct: 288 NEELEKE 294

Source: Daucus carota subsp. sativus

Species: Daucus carota

Genus: Daucus

Family: Apiaceae

Order: Apiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|392612223|gb|AFM82421.1| beta-carotene hydroxylase [Nicotiana tabacum]

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/68 (83%), Positives = 63/68 (92%)

Query: 1   MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
           MAYMFVHDGLVH+RFPVGP+A+VPYLRKVAAAH LHHSEKFNG+PYGLFLGP+ELEEV G
Sbjct: 232 MAYMFVHDGLVHKRFPVGPVANVPYLRKVAAAHSLHHSEKFNGVPYGLFLGPKELEEVGG 291

Query: 61  TEGLDKET 68
            E L+KE 
Sbjct: 292 IEELEKEV 299

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350538547|ref|NP_001234348.1| beta-carotene hydroxylase [Solanum lycopersicum] gi|5870598|emb|CAB55625.1| beta-carotene hydroxylase [Solanum lycopersicum]

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/68 (83%), Positives = 63/68 (92%)

Query: 1   MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
           MAYMFVHDGLVH+RFPVGP+A+VPYLRKVAAAH LHHSEKFNG+PYGLF GP+ELEEV G
Sbjct: 232 MAYMFVHDGLVHKRFPVGPVANVPYLRKVAAAHSLHHSEKFNGVPYGLFFGPKELEEVGG 291

Query: 61  TEGLDKET 68
           TE L+KE 
Sbjct: 292 TEELEKEV 299

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	68
TAIR|locus:2131381	310	BETA-OHASE 1 "beta-hydroxylase	0.985	0.216	0.850	5e-28
TAIR|locus:2149599	303	BETA-OHASE 2 "beta-carotene hy	0.985	0.221	0.820	3.5e-27

TAIR|locus:2131381 BETA-OHASE 1 "beta-hydroxylase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 57/67 (85%), Positives = 63/67 (94%)

Query:     1 MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
             +AYMFVHDGLVH+RFPVGPIA VPYLRKVAAAHQLHH++KFNG+PYGLFLGP+ELEEV G
Sbjct:   224 IAYMFVHDGLVHKRFPVGPIADVPYLRKVAAAHQLHHTDKFNGVPYGLFLGPKELEEVGG 283

Query:    61 TEGLDKE 67
              E LDKE
Sbjct:   284 NEELDKE 290

GO:0005506 "iron ion binding" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0010291 "carotene beta-ring hydroxylase activity" evidence=IGI;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016123 "xanthophyll biosynthetic process" evidence=IGI

GO:0016119 "carotene metabolic process" evidence=IGI

TAIR|locus:2149599 BETA-OHASE 2 "beta-carotene hydroxylase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 55/67 (82%), Positives = 63/67 (94%)

Query:     1 MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
             MAYMFVHDGLVH+RFPVGPIA+VPYLRKVAAAHQLHH++KF G+PYGLFLGP+E+EEV G
Sbjct:   222 MAYMFVHDGLVHKRFPVGPIANVPYLRKVAAAHQLHHTDKFKGVPYGLFLGPKEVEEVGG 281

Query:    61 TEGLDKE 67
              E L+KE
Sbjct:   282 KEELEKE 288


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.142   0.439    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       68        68   0.00091  102 3  11 22  0.46    28
                                                     29  0.38    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  453 (48 KB)
  Total size of DFA:  85 KB (2067 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.09u 0.16s 8.25t   Elapsed:  00:00:00
  Total cpu time:  8.09u 0.16s 8.25t   Elapsed:  00:00:00
  Start:  Fri May 10 07:36:41 2013   End:  Fri May 10 07:36:41 2013

GO:0005506 "iron ion binding" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0010291 "carotene beta-ring hydroxylase activity" evidence=IGI;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016119 "carotene metabolic process" evidence=IGI

GO:0016123 "xanthophyll biosynthetic process" evidence=IGI

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SZZ8	BCH1_ARATH	1, ., 1, 4, ., 1, 3, ., 1, 2, 9	0.8507	0.9852	0.2161	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	bch1	SubName- Full=Chromosome chr2 scaffold_132, whole genome shotgun sequence; (299 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	ZEP	SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (658 aa)						•	•		0.925
	GSVIVG00025310001	SubName- Full=Chromosome chr8 scaffold_34, whole genome shotgun sequence; (504 aa)						•	•		0.914
	GSVIVG00007662001	SubName- Full=Chromosome undetermined scaffold_197, whole genome shotgun sequence; (479 aa)						•	•		0.911
	GSVIVG00000577001	SubName- Full=Chromosome chr8 scaffold_106, whole genome shotgun sequence; (553 aa)						•	•		0.903
	GSVIVG00025926001	SubName- Full=Chromosome chr12 scaffold_36, whole genome shotgun sequence; (583 aa)						•			0.899

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	68
PLN02601	303	PLN02601, PLN02601, beta-carotene hydroxylase	9e-39

>gnl|CDD|178211 PLN02601, PLN02601, beta-carotene hydroxylase

 Score =  129 bits (324), Expect = 9e-39
 Identities = 55/67 (82%), Positives = 63/67 (94%)

Query: 1   MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
           MAYMFVHDGLVH+RFPVGPIA+VPYLRKVAAAHQLHH++KF G+PYGLFLGP+E+EEV G
Sbjct: 222 MAYMFVHDGLVHKRFPVGPIANVPYLRKVAAAHQLHHTDKFKGVPYGLFLGPKEVEEVGG 281

Query: 61  TEGLDKE 67
            E L+KE
Sbjct: 282 KEELEKE 288

Length = 303

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	68
PLN02601	303	beta-carotene hydroxylase	100.0
PF04116	114	FA_hydroxylase: Fatty acid hydroxylase superfamily	91.11

>PLN02601 beta-carotene hydroxylase

Probab=100.00  E-value=1.2e-36  Score=228.66  Aligned_cols=68  Identities=81%  Similarity=1.405  Sum_probs=66.4

Q ss_pred             CeEEEEeceeeeccccCCccCCCHHHHHHHHHHHhhcCCCCCCeeeeEeeccchhhhhcccccccccC
Q 035757            1 MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEGTEGLDKET   68 (68)
Q Consensus         1 iaYf~vHD~liH~R~~~~~~~~~~Y~rrl~~AH~~HH~~K~~g~~fGfl~~p~~l~~v~~~~~~~~~~   68 (68)
                      |+||||||||||||||+++++||||+|+|++|||+||++|++|||||||++|+|||+|||+||||||+
T Consensus       222 iaYffVHDgLVHqRfp~~~~a~~~Y~rrl~~AHklHHa~Ke~Gv~FGfll~P~e~e~vgg~~el~~~~  289 (303)
T PLN02601        222 MAYMFVHDGLVHKRFPVGPIANVPYLRKVAAAHQLHHTDKFKGVPYGLFLGPKEVEEVGGKEELEKEI  289 (303)
T ss_pred             HHHHHHhhhhhccccccCCCCCCHHHHHHHHHHHhhccCCcCCccceEEeccHHHHhcCCHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999999999999999875

>PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases

Probab=91.11  E-value=0.065  Score=32.33  Aligned_cols=31  Identities=35%  Similarity=0.599  Sum_probs=22.4

Q ss_pred             EEEEeceeeeccccCCccCCCHHHHHHHHHHHhhcC
Q 035757            3 YMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHS   38 (68)
Q Consensus         3 Yf~vHD~liH~R~~~~~~~~~~Y~rrl~~AH~~HH~   38 (68)
                      |.+.|+++     .....+..+|++...+.|++||+
T Consensus        84 ~~~~H~~~-----~~~~~~~~~~~~~~~~~H~~HH~  114 (114)
T PF04116_consen   84 YIFIHSGY-----HHRFPPRLRYLFVTPRHHDLHHS  114 (114)
T ss_pred             HHHhhcCc-----cCCCCCcchhHhcCHHHHHhhCc
Confidence            34556666     23334667899999999999995

Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways []. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins.; GO: 0005506 iron ion binding, 0016491 oxidoreductase activity, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00