Citrus Sinensis ID: 035876

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------
Protein Sequence
MVSPGIASNSTRDGGVSGGGLGHWNSPLPYLFGGLGLMMGLITVALMILACSYRKSSSNSATDHADEDKSAGHDKQVEMQTEMEPKIVVIMAGDDNPSYLAKPVSCTFYHQQTEQVL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEEcccccccEEEccEEcccccccccccc
Coil and Loop (DISEMBL)
mvspgiasnstrdggvsggglghwnsplpylfgglGLMMGLITVALMILACSYrksssnsatdhadedksaghdKQVEMQTEMEPKIVVIMagddnpsylakpvsctfyhqqteqvl
Flexible Loop (DISEMBL)
mvspgiasnstrdggvsggGLGHWNSPLPYLFGGLGLMMGLITVALMILACSYRKSSSNSATDHADEDKSAGHDKQVEMQTEMEPKIVVIMAGDDNPSYLAKPVSCTFYHQQTEQVL
Low Complexity Region (SEG)
MVSPGIASNSTRDGGVSGGGLGHWNSPLPYlfgglglmmglITVALMILACSYRKSSSNSATDHADEDKSAGHDKQVEMQTEMEPKIVVIMAGDDNPSYLAKPVSCTFYHQQTEQVL
Disordered region (IsUnstruct)
******************GGLGHWNSPLPYLFGGLGLMMGLITVALMILACSY*********************************IVVIMAGDDNPSYLAKPVSCTFYH*******
Disordered Region (DISOPRED)
**********************HWNSPLPYLFGGLGLMMGLITVALMILAC*********************************PKIVVIMAGDDNPSYLAKPVS************
Disordered Region (DISEMBL)
**************GVSGGGLGHWNSPLPYLFGGLGLMMGLITVALMILACSY*********************KQVEMQTEMEPKIVVIMAGDDNPSYLAKPVSCTFYHQQTEQVL
Disordered Region (DISPRO)
*********************GHWNSPLPYLFGGLGLMMGLITVALMILACSYRK*************************TEMEPKIVVIMAGDDNPSYLAKPVSCTFY********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVSPGIASNSTRDGGVSGGGLGHWNSPLPYLFGGLGLMMGLITVALMILACSYRKSSSNSATDHADEDKSAGHDKQVEMQTEMEPKIVVIMAGDDNPSYLAKPVSCTFYHQQTEQVL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	117	2.2.26 [Sep-21-2011]
Q9SW07	129	Protein GLUTAMINE DUMPER	yes	no	0.786	0.713	0.469	1e-16
O81775	158	Protein GLUTAMINE DUMPER	no	no	0.700	0.518	0.516	4e-15
Q8S8A0	156	Protein GLUTAMINE DUMPER	no	no	0.743	0.557	0.445	6e-15
Q9FHH5	148	Protein GLUTAMINE DUMPER	no	no	0.769	0.608	0.428	4e-13
Q3E965	131	Protein GLUTAMINE DUMPER	no	no	0.658	0.587	0.475	7e-10
Q3E8L0	97	Protein GLUTAMINE DUMPER	no	no	0.735	0.886	0.404	7e-09
Q3EAV6	111	Protein GLUTAMINE DUMPER	no	no	0.666	0.702	0.487	3e-07

>sp|Q9SW07|GDU2_ARATH Protein GLUTAMINE DUMPER 2 OS=Arabidopsis thaliana GN=GDU2 PE=2 SV=1

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/98 (46%), Positives = 58/98 (59%), Gaps = 6/98 (6%)

Query: 24  WNSPLPYLFGGLGLMMGLITVALMILACSYRKSSSNSATD-HADEDKSAGHDKQVEMQTE 82
           W+SP+PYLFGGL  M+ LI VAL+ILACSY + S ++  D  A +D    +D      TE
Sbjct: 28  WHSPVPYLFGGLAAMLALICVALLILACSYWRLSGSAERDLEAGDDAKPDNDTNKTKHTE 87

Query: 83  MEPKIVVIMAGDDNPSYLAKPV-----SCTFYHQQTEQ 115
           M  K +VIMAGD  P+YLA P      SCT      E+
Sbjct: 88  MPEKFLVIMAGDVRPTYLATPATRSEQSCTCGDHNEEE 125

Probable subunit of an amino acid transporter involved in the regulation of the amino acid metabolism. Stimulates amino acid export by activating nonselective amino acid facilitators.
Arabidopsis thaliana (taxid: 3702)

>sp|O81775|GDU1_ARATH Protein GLUTAMINE DUMPER 1 OS=Arabidopsis thaliana GN=GDU1 PE=1 SV=1

 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 46/89 (51%), Positives = 56/89 (62%), Gaps = 7/89 (7%)

Query: 24  WNSPLPYLFGGLGLMMGLITVALMILACSYRKSSSNSATD--HADEDK-SAGHDKQVEMQ 80
           W+SP+PYLFGGL  M+GLI  AL+ILACSY + SS+   D  + DE+K S   DK     
Sbjct: 30  WHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSSSGEEDGQNVDEEKESRSGDKAA--N 87

Query: 81  TEMEPKIVVIMAGDDNPSYLAKPV--SCT 107
              E K +VIMAG+D P YLA P    CT
Sbjct: 88  GAYEEKFLVIMAGEDLPRYLATPAMKKCT 116

Probable subunit of an amino acid transporter involved in the regulation of the amino acid metabolism. Stimulates amino acid export by activating nonselective amino acid facilitators. Required the interaction with the RING-type E3 ubiquitin-protein ligase LOG2 to fulfill its function. Plays a role in the Gln export at hydathodes, at xylem parenchyma into xylem sap and from mesophyll into leaf apoplasm. Acts upstream genes involved in the salicylic acid (SA) pathway and in the geminivirus-host interaction.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8S8A0|GDU4_ARATH Protein GLUTAMINE DUMPER 4 OS=Arabidopsis thaliana GN=GDU4 PE=2 SV=1

 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 58/92 (63%), Gaps = 5/92 (5%)

Query: 24  WNSPLPYLFGGLGLMMGLITVALMILACSYRK--SSSNSATDHADEDKSAGHDKQVEMQT 81
           W+SP+PYLFGGL  M+GLI  AL+ILACSY +  +S + + +  DE+K +    +     
Sbjct: 33  WHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSTSGDDSGERVDEEKESRSGVKA-ASA 91

Query: 82  EMEPKIVVIMAGDDNPSYLAKPVS--CTFYHQ 111
             E K++VIMAGDD P +LA P +  C   H+
Sbjct: 92  ACEEKVLVIMAGDDLPRFLATPAANKCMCGHE 123

Probable subunit of an amino acid transporter involved in the regulation of the amino acid metabolism. Stimulates amino acid export by activating nonselective amino acid facilitators.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FHH5|GDU3_ARATH Protein GLUTAMINE DUMPER 3 OS=Arabidopsis thaliana GN=GDU3 PE=2 SV=1

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 18  GGGLGHWNSPLPYLFGGLGLMMGLITVALMILACSYRKSS------SNSATDHADEDKSA 71
           GG    W+SP+PYLFGGL  M+GLI  AL+ILACSY + S       N + +   E    
Sbjct: 22  GGPHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSGYLDGEENQSRERDLEVGDV 81

Query: 72  GHDKQVEMQTEMEPKIVVIMAGDDNPSYLAKPV--SCT 107
             DK       +  K +VIMAG+  P+YLA P   +CT
Sbjct: 82  KPDKTAVKPVALPEKFLVIMAGNVKPTYLATPSVKTCT 119

Probable subunit of an amino acid transporter involved in the regulation of the amino acid metabolism. Stimulates amino acid export by activating nonselective amino acid facilitators. Acts upstream genes involved in the salicylic acid (SA) pathway and in the geminivirus-host interaction.

Arabidopsis thaliana (taxid: 3702)

>sp|Q3E965|GDU5_ARATH Protein GLUTAMINE DUMPER 5 OS=Arabidopsis thaliana GN=GDU5 PE=2 SV=2

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 55/82 (67%), Gaps = 5/82 (6%)

Query: 24  WNSPLPYLFGGLGLMMGLITVALMILACSYRKSSSNSATDHADEDKSAGHDKQVEMQTEM 83
           W +P+PYLFGGL  M+GLI  AL++LACSY + S  +     DE+K     ++V +    
Sbjct: 28  WRTPVPYLFGGLAAMLGLIAFALLLLACSYWRLSRQT----EDEEKQTESGEKV-VAKAF 82

Query: 84  EPKIVVIMAGDDNPSYLAKPVS 105
           E KI+VIMAG +NP++LA PV+
Sbjct: 83  EEKILVIMAGQNNPTFLATPVA 104

Probable subunit of an amino acid transporter involved in the regulation of the amino acid metabolism. Stimulates amino acid export by activating nonselective amino acid facilitators.

Arabidopsis thaliana (taxid: 3702)

>sp|Q3E8L0|GDU7_ARATH Protein GLUTAMINE DUMPER 7 OS=Arabidopsis thaliana GN=GDU7 PE=2 SV=1

 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 8/94 (8%)

Query: 12  RDGGVS-GGGLGHWNSPLPYLFGGLGLMMGLITVALMILA-CSYRKSSSNSATDHADEDK 69
           RD  V     L + +SP+       G+M+GL  ++L  +A   Y K +SNS      E+K
Sbjct: 5   RDSMVPVNSRLENMDSPILSKICAWGVMLGLFALSLFAMAYACYHKQTSNSCI----EEK 60

Query: 70  SAGHDKQVEMQTEMEPKIVVIMAGDDNPSYLAKP 103
                KQV    +MEPKIVVIMAG++NP++ AKP
Sbjct: 61  QG--KKQVLKPLDMEPKIVVIMAGNENPTFFAKP 92

Probable subunit of an amino acid transporter involved in the regulation of the amino acid metabolism. Stimulates amino acid export by activating nonselective amino acid facilitators.

Arabidopsis thaliana (taxid: 3702)

>sp|Q3EAV6|GDU6_ARATH Protein GLUTAMINE DUMPER 6 OS=Arabidopsis thaliana GN=GDU6 PE=2 SV=1

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/78 (48%), Positives = 53/78 (67%)

Query: 24  WNSPLPYLFGGLGLMMGLITVALMILACSYRKSSSNSATDHADEDKSAGHDKQVEMQTEM 83
           W SP+PYLFGGL L++ LI +AL+ L C+++K SS+S  +H DE+   G      +  E 
Sbjct: 10  WKSPVPYLFGGLFLLVLLIALALLSLVCTHQKPSSSSNNNHMDEEDDVGDKDAKPITREY 69

Query: 84  EPKIVVIMAGDDNPSYLA 101
            PKIVVI+AGD+ P+ LA
Sbjct: 70  LPKIVVILAGDNKPTCLA 87

Probable subunit of an amino acid transporter involved in the regulation of the amino acid metabolism. Stimulates amino acid export by activating nonselective amino acid facilitators.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	117
224127552	106	predicted protein [Populus trichocarpa]	0.794	0.877	0.663	1e-27
224127548	109	predicted protein [Populus trichocarpa]	0.837	0.899	0.63	8e-27
224077576	106	predicted protein [Populus trichocarpa]	0.880	0.971	0.616	1e-25
255618736	118	conserved hypothetical protein [Ricinus	0.837	0.830	0.588	5e-24
255579958	115	conserved hypothetical protein [Ricinus	0.769	0.782	0.552	6e-22
224127544	106	predicted protein [Populus trichocarpa]	0.880	0.971	0.570	3e-21
255579956	124	conserved hypothetical protein [Ricinus	0.683	0.645	0.602	3e-21
255616790	125	conserved hypothetical protein [Ricinus	0.837	0.784	0.504	5e-21
356567164	106	PREDICTED: uncharacterized protein LOC10	0.811	0.896	0.5	2e-19
356567160	123	PREDICTED: uncharacterized protein LOC10	0.769	0.731	0.467	3e-19

>gi|224127552|ref|XP_002329306.1| predicted protein [Populus trichocarpa] gi|222870760|gb|EEF07891.1| predicted protein [Populus trichocarpa]

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/98 (66%), Positives = 72/98 (73%), Gaps = 5/98 (5%)

Query: 19  GGLGHWNSPLPYLFGGLGLMMGLITVALMILACSYRKSSSNSATDHADEDKSAGHDKQVE 78
            G    NSP+PYLF  +GLM GL+ VALMILACSYRKSSS SATD   ++KSA    QVE
Sbjct: 14  AGYQDRNSPIPYLFSSIGLMFGLVAVALMILACSYRKSSSTSATDPEVQEKSAN---QVE 70

Query: 79  MQTEMEPKIVVIMAGDDNPSYLAKPVSCTFYHQQTEQV 116
           M+ EMEPKIVVIMAGDD P+YLA PVSC    Q  EQV
Sbjct: 71  MKAEMEPKIVVIMAGDDRPTYLANPVSCNC--QSDEQV 106

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127548|ref|XP_002329305.1| predicted protein [Populus trichocarpa] gi|222870759|gb|EEF07890.1| predicted protein [Populus trichocarpa]

 Score =  124 bits (311), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 63/100 (63%), Positives = 78/100 (78%), Gaps = 2/100 (2%)

Query: 7   ASNSTRDGGVSGGGLGHWNSPLPYLFGGLGLMMGLITVALMILACSYRKSSSNSATDHAD 66
           A+N +  GG + GG  HWNSP+ Y+F GL LM+GLITVAL+ILACSYRKS SNS+   A+
Sbjct: 4   ATNPSVGGGGAHGGFWHWNSPVAYVFVGLALMLGLITVALIILACSYRKSLSNSSRREAE 63

Query: 67  EDKSAGHDKQVEMQTEMEPKIVVIMAGDDNPSYLAKPVSC 106
            D+     KQVE+Q + EPK+VVIMAGD+NP+YLAKPVSC
Sbjct: 64  LDEKPA--KQVEIQVDFEPKVVVIMAGDENPTYLAKPVSC 101

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224077576|ref|XP_002305310.1| predicted protein [Populus trichocarpa] gi|222848274|gb|EEE85821.1| predicted protein [Populus trichocarpa]

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/107 (61%), Positives = 81/107 (75%), Gaps = 4/107 (3%)

Query: 7   ASNSTRDGGVSGGGLGHWNSPLPYLFGGLGLMMGLITVALMILACSYRKSSSNSATDHAD 66
           ++NST  GG + GG  HWNSP+ Y+F GL  M+GLITV+L+ILACS  KS SNS+T  A+
Sbjct: 4   STNSTA-GGSAHGGFWHWNSPVAYVFVGLAFMLGLITVSLIILACSSGKSLSNSSTSEAE 62

Query: 67  EDKSAGHDKQVEMQTEMEPKIVVIMAGDDNPSYLAKPVSCTFYHQQT 113
           ++KSA   KQVE+Q E EP IVVIMAGDDNP+YLAKPVSC    +Q 
Sbjct: 63  DEKSA---KQVEIQVEFEPNIVVIMAGDDNPTYLAKPVSCNCPSEQV 106

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255618736|ref|XP_002539968.1| conserved hypothetical protein [Ricinus communis] gi|223500659|gb|EEF22415.1| conserved hypothetical protein [Ricinus communis]

 Score =  114 bits (286), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 60/102 (58%), Positives = 73/102 (71%), Gaps = 4/102 (3%)

Query: 19  GGLGHWNSPLPYLFGGLGLMMGLITVALMILACSYR---KSSSNSATDH-ADEDKSAGHD 74
           GG  HWNSP+PYLFGGL LM+GLI +ALMILACSY+    S+++S  DH A E+KS    
Sbjct: 17  GGFQHWNSPVPYLFGGLALMLGLIAMALMILACSYKNSSPSNNSSPRDHQAAEEKSRHDH 76

Query: 75  KQVEMQTEMEPKIVVIMAGDDNPSYLAKPVSCTFYHQQTEQV 116
           K+ E+Q EMEPKIVVIMAGD NP+Y AKP       +  +QV
Sbjct: 77  KRAELQMEMEPKIVVIMAGDHNPTYFAKPAVPLHLPKYEQQV 118

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579958|ref|XP_002530814.1| conserved hypothetical protein [Ricinus communis] gi|223529635|gb|EEF31582.1| conserved hypothetical protein [Ricinus communis]

 Score =  107 bits (268), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 53/96 (55%), Positives = 69/96 (71%), Gaps = 6/96 (6%)

Query: 8   SNSTRDGGVSGGGLGHWNSPLPYLFGGLGLMMGLITVALMILACSYRKSSSNSATDHADE 67
           SNST     +  G  HW+SP+PYLFGGL LM+G+I VAL+ILACSYRKS S+ +     E
Sbjct: 5   SNST-----TTAGFWHWSSPMPYLFGGLALMLGVIAVALIILACSYRKSLSDESRGDGHE 59

Query: 68  DKSAGHDKQVEMQTEMEPKIVVIMAGDDNPSYLAKP 103
           +K      ++ + ++ EPKIVVIMAGDDNP++LAKP
Sbjct: 60  EKPGAKQAELTVDSD-EPKIVVIMAGDDNPTFLAKP 94

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127544|ref|XP_002329304.1| predicted protein [Populus trichocarpa] gi|222870758|gb|EEF07889.1| predicted protein [Populus trichocarpa]

 Score =  105 bits (263), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/107 (57%), Positives = 77/107 (71%), Gaps = 4/107 (3%)

Query: 7   ASNSTRDGGVSGGGLGHWNSPLPYLFGGLGLMMGLITVALMILACSYRKSSSNSATDHAD 66
           A+NST   G + GG  HWNSP+ Y F GL  M+GLITVAL+ILACSYRKS S+S+   A 
Sbjct: 4   ATNSTAVDG-THGGFWHWNSPVVYFFVGLAFMLGLITVALIILACSYRKSLSSSSRSDAG 62

Query: 67  EDKSAGHDKQVEMQTEMEPKIVVIMAGDDNPSYLAKPVSCTFYHQQT 113
           ++K A H+   E+Q ++EPKI VIMAGD+NP+YL KPVSC    +Q 
Sbjct: 63  DEKPAKHE---EIQVDLEPKIAVIMAGDENPTYLLKPVSCNCPSEQV 106

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579956|ref|XP_002530813.1| conserved hypothetical protein [Ricinus communis] gi|223529634|gb|EEF31581.1| conserved hypothetical protein [Ricinus communis]

 Score =  105 bits (262), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 50/83 (60%), Positives = 64/83 (77%), Gaps = 3/83 (3%)

Query: 20  GLGHWNSPLPYLFGGLGLMMGLITVALMILACSYRKSSSNSATDHADEDKSAGHDKQVEM 79
           G  HW+SP+PYLFGGL L++G+I VAL+ILACSYRKS SN +T+   E+K     +QVE+
Sbjct: 15  GFWHWSSPIPYLFGGLALILGIIAVALIILACSYRKSLSNESTEDGHEEKPGA--RQVEI 72

Query: 80  QTEM-EPKIVVIMAGDDNPSYLA 101
             +  EPKI VIMAGDDNP++LA
Sbjct: 73  MVDSDEPKIAVIMAGDDNPTFLA 95

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255616790|ref|XP_002539784.1| conserved hypothetical protein [Ricinus communis] gi|223502421|gb|EEF22599.1| conserved hypothetical protein [Ricinus communis]

 Score =  104 bits (260), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 51/101 (50%), Positives = 65/101 (64%), Gaps = 3/101 (2%)

Query: 1   MVSPGIASNSTRDGGVSGGGLGHWNSPLPYLFGGLGLMMGLITVALMILACSYRKSSSNS 60
           M+ P   SNST     +  G  HW+SP+PYLFGGL +M+  +TV+L+ILACSYRKS  N 
Sbjct: 1   MMRPTATSNSTT---AAAAGFWHWSSPIPYLFGGLAVMLAFVTVSLIILACSYRKSLFNH 57

Query: 61  ATDHADEDKSAGHDKQVEMQTEMEPKIVVIMAGDDNPSYLA 101
            +   D +   G  K   M    EPKIVVIMAGD+NP++LA
Sbjct: 58  ESRDDDHEDKTGAKKVEVMVDSDEPKIVVIMAGDNNPTFLA 98

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567164|ref|XP_003551791.1| PREDICTED: uncharacterized protein LOC100782742 [Glycine max]

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 67/96 (69%), Gaps = 1/96 (1%)

Query: 18  GGGLGHWNSPLPYLFGGLGLMMGLITVALMILACSYRKSSSNSATDHADEDKSAGHDKQV 77
            GG    +SP+PYLFGGL +M+ LI VAL+ILA SYRK    ++++ A +++     K V
Sbjct: 6   AGGFKTLSSPIPYLFGGLAIMLALIAVALLILAWSYRKQYYTTSSNSASDEEKPPQIKMV 65

Query: 78  EMQTEM-EPKIVVIMAGDDNPSYLAKPVSCTFYHQQ 112
           E +  + EPKIVVIMAG+ NP+YLAKPV  T +++Q
Sbjct: 66  EKEENVSEPKIVVIMAGEGNPTYLAKPVPSTSHNEQ 101

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567160|ref|XP_003551789.1| PREDICTED: uncharacterized protein LOC100781671 [Glycine max]

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 65/92 (70%), Gaps = 2/92 (2%)

Query: 18  GGGLGHWNSPLPYLFGGLGLMMGLITVALMILACSYRKSSSNSATDHADEDKSAGHDKQV 77
             G+  W SP+PYLFGGL +M+ +I++AL+IL CSYRK  S S+++  ++ KS      +
Sbjct: 15  ASGVNIWKSPIPYLFGGLAVMLAIISMALVILVCSYRKRDSQSSSEVNEDVKSQAMANNL 74

Query: 78  EMQTEMEPKIVVIMAGDDNPSYLAKPVSCTFY 109
           E  T  EP+++VIMAGD NP+YLAKP++ + +
Sbjct: 75  E--TNSEPEVLVIMAGDHNPTYLAKPITSSIF 104

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	117
TAIR|locus:1005716497	111	GDU6 "AT3G30725" [Arabidopsis	0.683	0.720	0.439	5e-12
TAIR|locus:2117517	129	GDU2 "AT4G25760" [Arabidopsis	0.700	0.635	0.421	5e-12
TAIR|locus:2124894	158	GDU1 "glutamine dumper 1" [Ara	0.700	0.518	0.426	2e-10
TAIR|locus:505006270	156	GDU4 "AT2G24762" [Arabidopsis	0.743	0.557	0.380	5.2e-10
TAIR|locus:2149448	131	GDU5 "AT5G24920" [Arabidopsis	0.658	0.587	0.378	2.9e-09
TAIR|locus:504954872	148	GDU3 "AT5G57685" [Arabidopsis	0.786	0.621	0.34	3.3e-08
TAIR|locus:2166635	97	GDU7 "AT5G38770" [Arabidopsis	0.470	0.567	0.467	2.3e-07

TAIR|locus:1005716497 GDU6 "AT3G30725" [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 36/82 (43%), Positives = 49/82 (59%)

Query:    24 WNSPLPYXXXXXXXXXXXITVALMILACSYRKSSSNSATDHADEDKSAGHDKQVEMQT-E 82
             W SP+PY           I +AL+ L C+++K SS+S  +H DE+   G DK  +  T E
Sbjct:    10 WKSPVPYLFGGLFLLVLLIALALLSLVCTHQKPSSSSNNNHMDEEDDVG-DKDAKPITRE 68

Query:    83 MEPKIVVIMAGDDNPSYLAKPV 104
               PKIVVI+AGD+ P+ LA PV
Sbjct:    69 YLPKIVVILAGDNKPTCLAVPV 90

GO:0003674 "molecular_function" evidence=ND

GO:0080143 "regulation of amino acid export" evidence=IMP

TAIR|locus:2117517 GDU2 "AT4G25760" [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 35/83 (42%), Positives = 46/83 (55%)

Query:    24 WNSPLPYXXXXXXXXXXXITVALMILACSYRKSSSNSATD-HADEDKSAGHDKQVEMQTE 82
             W+SP+PY           I VAL+ILACSY + S ++  D  A +D    +D      TE
Sbjct:    28 WHSPVPYLFGGLAAMLALICVALLILACSYWRLSGSAERDLEAGDDAKPDNDTNKTKHTE 87

Query:    83 MEPKIVVIMAGDDNPSYLAKPVS 105
             M  K +VIMAGD  P+YLA P +
Sbjct:    88 MPEKFLVIMAGDVRPTYLATPAT 110

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0080143 "regulation of amino acid export" evidence=IMP

TAIR|locus:2124894 GDU1 "glutamine dumper 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 38/89 (42%), Positives = 47/89 (52%)

Query:    24 WNSPLPYXXXXXXXXXXXITVALMILACSYRKSSSNSATD--HADEDK-SAGHDKQVEMQ 80
             W+SP+PY           I  AL+ILACSY + SS+   D  + DE+K S   DK     
Sbjct:    30 WHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSSSGEEDGQNVDEEKESRSGDKAAN-- 87

Query:    81 TEMEPKIVVIMAGDDNPSYLAKPV--SCT 107
                E K +VIMAG+D P YLA P    CT
Sbjct:    88 GAYEEKFLVIMAGEDLPRYLATPAMKKCT 116

GO:0005634 "nucleus" evidence=IDA

GO:0010585 "glutamine secretion" evidence=IMP

GO:0016020 "membrane" evidence=IDA

GO:0016021 "integral to membrane" evidence=ISS;IDA

GO:0080143 "regulation of amino acid export" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:505006270 GDU4 "AT2G24762" [Arabidopsis thaliana (taxid:3702)]

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 35/92 (38%), Positives = 50/92 (54%)

Query:    24 WNSPLPYXXXXXXXXXXXITVALMILACSY-RKSSS-NSATDHADEDKSAGHDKQVEMQT 81
             W+SP+PY           I  AL+ILACSY R S+S + + +  DE+K +    +     
Sbjct:    33 WHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSTSGDDSGERVDEEKESRSGVKAA-SA 91

Query:    82 EMEPKIVVIMAGDDNPSYLAKPVS--CTFYHQ 111
               E K++VIMAGDD P +LA P +  C   H+
Sbjct:    92 ACEEKVLVIMAGDDLPRFLATPAANKCMCGHE 123

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0080143 "regulation of amino acid export" evidence=IMP

TAIR|locus:2149448 GDU5 "AT5G24920" [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 31/82 (37%), Positives = 46/82 (56%)

Query:    24 WNSPLPYXXXXXXXXXXXITVALMILACSYRKSSSNSATDHADEDKSAGHDKQVEMQTEM 83
             W +P+PY           I  AL++LACSY + S  +     DE+K     ++V  +   
Sbjct:    28 WRTPVPYLFGGLAAMLGLIAFALLLLACSYWRLSRQTE----DEEKQTESGEKVVAKA-F 82

Query:    84 EPKIVVIMAGDDNPSYLAKPVS 105
             E KI+VIMAG +NP++LA PV+
Sbjct:    83 EEKILVIMAGQNNPTFLATPVA 104

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=ISS

GO:0080143 "regulation of amino acid export" evidence=IMP

TAIR|locus:504954872 GDU3 "AT5G57685" [Arabidopsis thaliana (taxid:3702)]

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 34/100 (34%), Positives = 45/100 (45%)

Query:    16 VSGGGLGHWNSPLPYXXXXXXXXXXXITVALMILACSYRKSSS---NSATDHADEDKSAG 72
             + GG    W+SP+PY           I  AL+ILACSY + S           + D   G
Sbjct:    20 MGGGPHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSGYLDGEENQSRERDLEVG 79

Query:    73 H---DKQVEMQTEMEPKIVVIMAGDDNPSYLAKPV--SCT 107
                 DK       +  K +VIMAG+  P+YLA P   +CT
Sbjct:    80 DVKPDKTAVKPVALPEKFLVIMAGNVKPTYLATPSVKTCT 119

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0016021 "integral to membrane" evidence=RCA

GO:0032940 "secretion by cell" evidence=ISS

GO:0080143 "regulation of amino acid export" evidence=IMP

GO:0009615 "response to virus" evidence=IMP

GO:0019048 "virus-host interaction" evidence=IMP

TAIR|locus:2166635 GDU7 "AT5G38770" [Arabidopsis thaliana (taxid:3702)]

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 29/62 (46%), Positives = 39/62 (62%)

Query:    42 ITVALMILACSYRKSSSNSATDHADEDKSAGHDKQVEMQTEMEPKIVVIMAGDDNPSYLA 101
             +++  M  AC Y K +SNS      E+K     KQV    +MEPKIVVIMAG++NP++ A
Sbjct:    38 LSLFAMAYAC-YHKQTSNSCI----EEKQG--KKQVLKPLDMEPKIVVIMAGNENPTFFA 90

Query:   102 KP 103
             KP
Sbjct:    91 KP 92


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.127   0.374    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      117       106   0.00091  102 3  11 23  0.49    30
                                                     29  0.39    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  560 (60 KB)
  Total size of DFA:  121 KB (2079 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.91u 0.13s 12.04t   Elapsed:  00:00:00
  Total cpu time:  11.91u 0.13s 12.04t   Elapsed:  00:00:00
  Start:  Fri May 10 12:24:47 2013   End:  Fri May 10 12:24:47 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0080143 "regulation of amino acid export" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	117
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	87.3
PF02439	38	Adeno_E3_CR2: Adenovirus E3 region protein CR2; In	86.66
PF07204	98	Orthoreo_P10: Orthoreovirus membrane fusion protei	85.35

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=87.30  E-value=0.62  Score=34.69  Aligned_cols=35  Identities=26%  Similarity=0.404  Sum_probs=23.7

Q ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHHHHhhhcccCC
Q 035876           23 HWNSPLPYLFGGLGLMMGLITVALMILACSYRKSSS   58 (117)
Q Consensus        23 ~W~SPvPYLFgGLA~MLgLIAvALLILaCSy~K~ss   58 (117)
                      .+..|+= ...-|++|.|+|++.|||+-|-||+...
T Consensus        60 ~fs~~~i-~~Ii~gv~aGvIg~Illi~y~irR~~Kk   94 (122)
T PF01102_consen   60 RFSEPAI-IGIIFGVMAGVIGIILLISYCIRRLRKK   94 (122)
T ss_dssp             SSS-TCH-HHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred             Cccccce-eehhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            4445542 4456889999999999998888765543

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []

Probab=86.66  E-value=1.5  Score=27.16  Aligned_cols=29  Identities=21%  Similarity=0.505  Sum_probs=24.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 035876           31 LFGGLGLMMGLITVALMILACSYRKSSSN   59 (117)
Q Consensus        31 LFgGLA~MLgLIAvALLILaCSy~K~ss~   59 (117)
                      ...|..+-|.+|.+..+.-+|-|||..++
T Consensus         8 IIv~V~vg~~iiii~~~~YaCcykk~~~~   36 (38)
T PF02439_consen    8 IIVAVVVGMAIIIICMFYYACCYKKHRRQ   36 (38)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcccccc
Confidence            56778888888999999999999997653

This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.

>PF07204 Orthoreo_P10: Orthoreovirus membrane fusion protein p10; InterPro: IPR009854 This family consists of several Orthoreovirus membrane fusion protein p10 sequences

Probab=85.35  E-value=0.55  Score=34.30  Aligned_cols=37  Identities=32%  Similarity=0.468  Sum_probs=29.6

Q ss_pred             cCCCCChhHHHHHHHHHHHHHHHHHHHHHhhhcccCC
Q 035876           22 GHWNSPLPYLFGGLGLMMGLITVALMILACSYRKSSS   58 (117)
Q Consensus        22 ~~W~SPvPYLFgGLA~MLgLIAvALLILaCSy~K~ss   58 (117)
                      +..-+=.|||-+|=+++|.||-++|+.-.|.+||.+.
T Consensus        36 S~~~ayWpyLA~GGG~iLilIii~Lv~CC~~K~K~~~   72 (98)
T PF07204_consen   36 SSFVAYWPYLAAGGGLILILIIIALVCCCRAKHKTSA   72 (98)
T ss_pred             ehHHhhhHHhhccchhhhHHHHHHHHHHhhhhhhhHh
Confidence            4556677999999899998888888887788888653

p10 is thought to be a multifunctional protein that plays a key role in virus-host interaction [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	117
2knc_A	54	Integrin alpha-IIB; transmembrane signaling, prote	91.48

>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}

Probab=91.48  E-value=0.53  Score=29.93  Aligned_cols=34  Identities=21%  Similarity=0.483  Sum_probs=23.7

Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHH---hhhcccCCC
Q 035876           26 SPLPYLFGGLGLMMGLITVALMILA---CSYRKSSSN   59 (117)
Q Consensus        26 SPvPYLFgGLA~MLgLIAvALLILa---CSy~K~ss~   59 (117)
                      +++|.-..-++++.||+-++|++++   |-+.|+...
T Consensus         8 ~~vp~wiIi~svl~GLllL~li~~~LwK~GFFkR~~~   44 (54)
T 2knc_A            8 RAIPIWWVLVGVLGGLLLLTILVLAMWKVGFFKRNRP   44 (54)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHHHHcCcccCCCC
Confidence            4566666667777788777777666   777776654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00